Query 004785
Match_columns 730
No_of_seqs 517 out of 3463
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 05:42:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004785.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004785hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 6.7E-26 2.3E-30 243.6 31.7 212 80-320 92-316 (344)
2 2aq5_A Coronin-1A; WD40 repeat 99.9 1.9E-25 6.4E-30 241.3 32.3 275 29-340 5-301 (402)
3 1vyh_C Platelet-activating fac 99.9 3.2E-25 1.1E-29 242.4 32.4 241 74-321 113-398 (410)
4 3ow8_A WD repeat-containing pr 99.9 3E-25 1E-29 235.0 29.1 236 80-322 47-309 (321)
5 4ery_A WD repeat-containing pr 99.9 2.9E-24 9.9E-29 223.2 35.5 241 76-322 30-298 (312)
6 2ynn_A Coatomer subunit beta'; 99.9 9.2E-25 3.2E-29 228.3 29.9 237 75-317 19-284 (304)
7 3frx_A Guanine nucleotide-bind 99.9 2.6E-24 9E-29 226.7 31.1 186 80-269 29-235 (319)
8 2xzm_R RACK1; ribosome, transl 99.9 8.7E-24 3E-28 224.3 33.4 239 80-323 38-329 (343)
9 1got_B GT-beta; complex (GTP-b 99.9 1.5E-23 5.2E-28 222.5 33.5 236 77-321 63-330 (340)
10 1vyh_C Platelet-activating fac 99.9 1.6E-23 5.5E-28 228.9 33.9 195 75-273 156-381 (410)
11 2ynn_A Coatomer subunit beta'; 99.9 8.5E-24 2.9E-28 221.0 29.7 192 75-269 61-267 (304)
12 3ow8_A WD repeat-containing pr 99.9 7E-24 2.4E-28 224.5 28.7 191 76-270 87-288 (321)
13 1got_B GT-beta; complex (GTP-b 99.9 1.1E-23 3.8E-28 223.6 29.7 171 81-255 154-332 (340)
14 2pm7_B Protein transport prote 99.9 2.8E-23 9.7E-28 216.3 32.1 179 76-254 16-226 (297)
15 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.7E-23 5.8E-28 222.9 30.7 179 75-255 22-214 (345)
16 4gqb_B Methylosome protein 50; 99.9 3.8E-24 1.3E-28 229.9 25.8 178 74-255 132-319 (344)
17 4g56_B MGC81050 protein; prote 99.9 1.1E-23 3.8E-28 226.3 27.7 172 81-255 105-289 (357)
18 3vl1_A 26S proteasome regulato 99.9 5.1E-23 1.7E-27 221.2 32.7 242 77-321 105-406 (420)
19 3iz6_a 40S ribosomal protein R 99.9 9.7E-24 3.3E-28 227.8 25.2 245 75-321 72-362 (380)
20 2pbi_B Guanine nucleotide-bind 99.9 6.7E-23 2.3E-27 219.7 31.4 241 75-322 70-345 (354)
21 2pbi_B Guanine nucleotide-bind 99.9 6.7E-23 2.3E-27 219.7 29.3 175 77-255 162-346 (354)
22 4e54_B DNA damage-binding prot 99.9 3.6E-23 1.2E-27 227.0 27.7 190 79-269 130-335 (435)
23 2hes_X YDR267CP; beta-propelle 99.9 2.7E-22 9.3E-27 212.3 32.6 177 83-261 26-230 (330)
24 1erj_A Transcriptional repress 99.9 2.5E-22 8.5E-27 217.7 32.5 185 75-261 70-287 (393)
25 1nr0_A Actin interacting prote 99.9 1E-22 3.6E-27 234.0 30.9 254 73-338 63-355 (611)
26 1gxr_A ESG1, transducin-like e 99.9 5.5E-22 1.9E-26 204.6 33.1 218 74-323 102-326 (337)
27 1erj_A Transcriptional repress 99.9 2.3E-22 8E-27 217.9 29.8 193 75-268 129-348 (393)
28 3ei3_B DNA damage-binding prot 99.9 9.2E-22 3.1E-26 209.9 33.8 240 78-321 82-370 (383)
29 1nr0_A Actin interacting prote 99.9 5.2E-22 1.8E-26 228.2 34.0 189 75-264 109-358 (611)
30 3dm0_A Maltose-binding peripla 99.9 1.4E-22 4.8E-27 235.6 29.6 182 79-264 393-595 (694)
31 3frx_A Guanine nucleotide-bind 99.9 2.8E-22 9.4E-27 211.2 28.9 175 75-254 71-256 (319)
32 3jrp_A Fusion protein of prote 99.9 9.4E-22 3.2E-26 206.3 31.5 225 75-323 17-276 (379)
33 3dwl_C Actin-related protein 2 99.9 4.2E-23 1.4E-27 219.0 21.1 176 79-255 21-225 (377)
34 3fm0_A Protein CIAO1; WDR39,SG 99.9 9.7E-22 3.3E-26 209.3 31.1 180 75-255 67-272 (345)
35 3bg1_A Protein SEC13 homolog; 99.9 9.6E-23 3.3E-27 214.5 22.6 177 78-254 22-235 (316)
36 2ymu_A WD-40 repeat protein; u 99.9 1E-21 3.5E-26 220.2 32.4 214 75-321 350-567 (577)
37 3zwl_B Eukaryotic translation 99.9 1.5E-21 5.2E-26 203.5 31.0 240 76-323 39-335 (369)
38 3f3f_A Nucleoporin SEH1; struc 99.9 4.7E-22 1.6E-26 204.1 26.2 192 77-269 19-345 (351)
39 3dw8_B Serine/threonine-protei 99.9 1.9E-21 6.5E-26 210.3 30.6 192 77-270 36-325 (447)
40 3iz6_a 40S ribosomal protein R 99.9 2.7E-22 9.4E-27 216.4 23.8 175 80-255 169-364 (380)
41 4g56_B MGC81050 protein; prote 99.9 2.1E-22 7.3E-27 216.2 22.5 178 74-255 144-332 (357)
42 2pm9_A Protein WEB1, protein t 99.9 1.4E-21 4.8E-26 208.9 28.1 197 75-273 73-306 (416)
43 1gxr_A ESG1, transducin-like e 99.9 7.7E-21 2.6E-25 196.1 32.7 216 75-323 57-285 (337)
44 3k26_A Polycomb protein EED; W 99.9 1.4E-21 4.8E-26 204.0 27.1 241 80-322 33-354 (366)
45 2hes_X YDR267CP; beta-propelle 99.9 1E-21 3.4E-26 207.9 26.2 179 75-255 64-269 (330)
46 4ery_A WD repeat-containing pr 99.9 2.2E-21 7.6E-26 201.4 28.0 150 102-255 18-169 (312)
47 4aow_A Guanine nucleotide-bind 99.9 1.6E-20 5.3E-25 194.8 34.2 241 79-323 49-326 (340)
48 2aq5_A Coronin-1A; WD40 repeat 99.9 1.3E-21 4.5E-26 211.1 26.4 174 80-255 93-287 (402)
49 2xzm_R RACK1; ribosome, transl 99.9 5.8E-21 2E-25 202.6 30.1 184 75-264 82-288 (343)
50 4gq1_A NUP37; propeller, trans 99.9 2E-22 6.8E-27 219.0 17.6 234 79-322 99-378 (393)
51 4aez_A CDC20, WD repeat-contai 99.9 8.5E-21 2.9E-25 205.3 30.0 235 81-322 103-368 (401)
52 2pm7_B Protein transport prote 99.9 2.6E-21 8.8E-26 201.5 24.6 176 80-255 66-274 (297)
53 4gga_A P55CDC, cell division c 99.9 2.6E-20 8.9E-25 203.0 32.8 234 80-320 115-381 (420)
54 3i2n_A WD repeat-containing pr 99.9 4.2E-21 1.4E-25 200.1 25.1 227 81-320 80-338 (357)
55 2ymu_A WD-40 repeat protein; u 99.9 3.9E-21 1.3E-25 215.5 26.5 174 75-255 391-569 (577)
56 1k8k_C P40, ARP2/3 complex 41 99.9 9.1E-21 3.1E-25 199.1 27.2 175 77-255 16-222 (372)
57 3v7d_B Cell division control p 99.9 1.6E-20 5.6E-25 205.4 30.3 233 80-322 131-410 (464)
58 1r5m_A SIR4-interacting protei 99.9 9.2E-21 3.1E-25 201.5 27.5 238 78-323 54-350 (425)
59 3dwl_C Actin-related protein 2 99.9 7.6E-22 2.6E-26 209.3 19.1 179 75-254 61-270 (377)
60 4a11_B DNA excision repair pro 99.9 8.2E-20 2.8E-24 193.5 34.6 245 75-323 49-354 (408)
61 4aez_A CDC20, WD repeat-contai 99.9 1.3E-20 4.3E-25 204.0 28.2 175 80-255 185-369 (401)
62 4aow_A Guanine nucleotide-bind 99.9 2.2E-20 7.5E-25 193.7 28.8 178 77-255 136-326 (340)
63 2j04_B YDR362CP, TAU91; beta p 99.9 1.7E-21 5.9E-26 222.1 21.5 170 81-255 225-417 (524)
64 3mmy_A MRNA export factor; mRN 99.9 1.5E-20 5.3E-25 195.8 26.8 216 81-324 54-336 (368)
65 3vl1_A 26S proteasome regulato 99.9 9.2E-21 3.1E-25 203.6 25.1 215 79-320 66-308 (420)
66 2pm9_A Protein WEB1, protein t 99.9 9.4E-21 3.2E-25 202.5 24.6 216 82-321 36-281 (416)
67 3zwl_B Eukaryotic translation 99.9 2.9E-20 9.8E-25 193.8 27.3 218 103-325 28-281 (369)
68 3jrp_A Fusion protein of prote 99.9 1.8E-20 6.1E-25 196.6 25.7 181 81-261 69-287 (379)
69 1r5m_A SIR4-interacting protei 99.9 3.2E-20 1.1E-24 197.3 27.4 245 73-323 112-414 (425)
70 3mkq_A Coatomer beta'-subunit; 99.9 1.7E-20 5.7E-25 219.3 27.1 237 75-318 19-285 (814)
71 4e54_B DNA damage-binding prot 99.9 1.2E-20 4.1E-25 206.9 24.0 192 104-321 116-314 (435)
72 3sfz_A APAF-1, apoptotic pepti 99.9 5.2E-20 1.8E-24 226.2 31.8 152 73-224 619-777 (1249)
73 2xyi_A Probable histone-bindin 99.9 5.1E-20 1.7E-24 201.9 27.3 174 80-255 140-341 (430)
74 3f3f_A Nucleoporin SEH1; struc 99.9 3.2E-20 1.1E-24 190.4 23.9 123 102-224 6-146 (351)
75 2j04_B YDR362CP, TAU91; beta p 99.9 5.4E-21 1.8E-25 218.0 20.1 208 82-320 174-414 (524)
76 1sq9_A Antiviral protein SKI8; 99.9 3.9E-20 1.3E-24 196.8 25.5 164 79-247 135-366 (397)
77 4ggc_A P55CDC, cell division c 99.9 5.8E-19 2E-23 181.2 33.3 232 82-320 37-301 (318)
78 3dm0_A Maltose-binding peripla 99.9 7.3E-20 2.5E-24 212.8 29.8 180 75-255 478-682 (694)
79 1k8k_C P40, ARP2/3 complex 41 99.9 5.5E-20 1.9E-24 193.1 26.1 176 74-253 57-262 (372)
80 4h5i_A Guanine nucleotide-exch 99.9 3.9E-20 1.3E-24 199.4 25.5 229 79-339 92-344 (365)
81 3bg1_A Protein SEC13 homolog; 99.9 5.6E-21 1.9E-25 200.9 18.5 176 80-255 70-282 (316)
82 1sq9_A Antiviral protein SKI8; 99.9 4.6E-20 1.6E-24 196.2 25.6 178 82-264 82-325 (397)
83 3k26_A Polycomb protein EED; W 99.9 1.4E-20 4.8E-25 196.4 19.9 182 81-265 85-322 (366)
84 4h5i_A Guanine nucleotide-exch 99.9 3.3E-20 1.1E-24 200.0 22.6 178 74-255 138-332 (365)
85 3lrv_A PRE-mRNA-splicing facto 99.9 3.2E-20 1.1E-24 196.5 22.0 171 80-255 47-234 (343)
86 3jro_A Fusion protein of prote 99.8 1E-19 3.5E-24 214.9 28.4 221 78-322 18-273 (753)
87 3gre_A Serine/threonine-protei 99.8 3.8E-20 1.3E-24 200.9 22.2 195 74-272 68-303 (437)
88 1yfq_A Cell cycle arrest prote 99.8 9.6E-20 3.3E-24 189.4 24.2 173 77-255 19-214 (342)
89 3mkq_A Coatomer beta'-subunit; 99.8 4.7E-19 1.6E-23 207.0 31.8 194 73-269 59-267 (814)
90 3i2n_A WD repeat-containing pr 99.8 6.4E-20 2.2E-24 191.1 21.5 169 82-255 32-232 (357)
91 3lrv_A PRE-mRNA-splicing facto 99.8 4.1E-20 1.4E-24 195.7 20.1 170 84-254 88-279 (343)
92 3ei3_B DNA damage-binding prot 99.8 2E-19 6.7E-24 191.9 25.3 144 80-225 130-286 (383)
93 3dw8_B Serine/threonine-protei 99.8 7.1E-20 2.4E-24 197.9 22.1 232 82-321 108-434 (447)
94 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.2E-18 4.2E-23 190.4 31.2 228 80-321 128-378 (445)
95 4a11_B DNA excision repair pro 99.8 1.1E-19 3.7E-24 192.6 22.0 212 92-322 24-264 (408)
96 3sfz_A APAF-1, apoptotic pepti 99.8 8E-19 2.7E-23 215.7 32.7 179 73-255 661-902 (1249)
97 4gga_A P55CDC, cell division c 99.8 1.1E-18 3.7E-23 190.2 30.1 155 103-260 226-394 (420)
98 1p22_A F-BOX/WD-repeat protein 99.8 6.7E-19 2.3E-23 192.5 28.2 181 79-271 141-335 (435)
99 2ovr_B FBW7, F-BOX/WD repeat p 99.8 2.2E-18 7.5E-23 188.4 32.3 245 81-337 169-441 (445)
100 3odt_A Protein DOA1; ubiquitin 99.8 2.1E-18 7.3E-23 176.2 30.2 171 73-254 63-243 (313)
101 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.9E-19 2.7E-23 192.9 28.8 232 81-344 143-393 (415)
102 2j04_A TAU60, YPL007P, hypothe 99.8 5.6E-20 1.9E-24 210.3 20.0 230 72-320 88-347 (588)
103 2vdu_B TRNA (guanine-N(7)-)-me 99.8 6.9E-19 2.4E-23 193.5 28.1 161 105-269 100-279 (450)
104 1yfq_A Cell cycle arrest prote 99.8 5.3E-19 1.8E-23 183.8 23.2 176 75-255 62-271 (342)
105 3gre_A Serine/threonine-protei 99.8 3.2E-19 1.1E-23 193.6 21.9 197 73-271 115-369 (437)
106 2xyi_A Probable histone-bindin 99.8 5.7E-19 1.9E-23 193.6 23.6 175 81-255 194-398 (430)
107 1l0q_A Surface layer protein; 99.8 3.1E-18 1E-22 182.5 28.6 229 82-321 3-261 (391)
108 3v7d_B Cell division control p 99.8 1.2E-18 4.1E-23 190.6 25.0 172 78-256 277-452 (464)
109 1pgu_A Actin interacting prote 99.8 2.7E-18 9.2E-23 192.6 28.5 171 78-255 27-227 (615)
110 2vdu_B TRNA (guanine-N(7)-)-me 99.8 7.1E-19 2.4E-23 193.4 23.1 175 75-254 108-326 (450)
111 3mmy_A MRNA export factor; mRN 99.8 1.2E-18 4.2E-23 181.4 23.7 177 75-255 92-335 (368)
112 1pgu_A Actin interacting prote 99.8 3.4E-18 1.2E-22 191.8 27.8 183 73-262 68-284 (615)
113 3bws_A Protein LP49; two-domai 99.8 2E-18 6.9E-23 186.4 24.6 214 80-324 133-365 (433)
114 3odt_A Protein DOA1; ubiquitin 99.8 1.6E-18 5.3E-23 177.2 22.4 166 80-254 113-284 (313)
115 2oaj_A Protein SNI1; WD40 repe 99.8 4.3E-19 1.5E-23 214.4 21.4 160 80-244 446-690 (902)
116 4ggc_A P55CDC, cell division c 99.8 1.8E-17 6E-22 170.2 28.4 180 73-255 71-304 (318)
117 3jro_A Fusion protein of prote 99.8 1.7E-18 5.9E-23 204.4 23.3 181 81-261 67-285 (753)
118 2oaj_A Protein SNI1; WD40 repe 99.8 2E-18 7E-23 208.5 24.4 184 73-263 21-244 (902)
119 3vu4_A KMHSV2; beta-propeller 99.8 1.6E-17 5.5E-22 177.9 27.4 181 76-262 26-272 (355)
120 2j04_A TAU60, YPL007P, hypothe 99.8 2.1E-18 7.3E-23 197.3 21.6 163 85-254 58-243 (588)
121 4gq1_A NUP37; propeller, trans 99.8 6.7E-19 2.3E-23 191.2 16.4 173 80-255 155-379 (393)
122 2w18_A PALB2, fancn, partner a 99.8 3E-18 1E-22 185.5 20.5 171 79-255 143-346 (356)
123 3bws_A Protein LP49; two-domai 99.8 6.1E-17 2.1E-21 174.8 27.7 226 78-321 178-418 (433)
124 1p22_A F-BOX/WD-repeat protein 99.8 5.7E-17 1.9E-21 177.2 27.0 164 80-255 182-354 (435)
125 3vu4_A KMHSV2; beta-propeller 99.8 1.7E-17 5.8E-22 177.7 20.5 169 85-255 75-325 (355)
126 2hqs_A Protein TOLB; TOLB, PAL 99.8 3.8E-17 1.3E-21 179.4 21.9 222 89-341 87-347 (415)
127 2w18_A PALB2, fancn, partner a 99.7 4.7E-17 1.6E-21 176.2 20.0 139 78-219 190-355 (356)
128 1l0q_A Surface layer protein; 99.7 2.6E-16 8.9E-21 167.5 24.7 189 75-269 79-283 (391)
129 2ojh_A Uncharacterized protein 99.7 5.8E-16 2E-20 155.5 22.9 164 87-255 18-192 (297)
130 2oit_A Nucleoporin 214KDA; NH2 99.7 1.2E-16 4E-21 177.4 17.9 176 75-255 42-260 (434)
131 3u4y_A Uncharacterized protein 99.7 3.8E-15 1.3E-19 154.8 26.8 174 79-254 8-194 (331)
132 2ojh_A Uncharacterized protein 99.7 5.6E-15 1.9E-19 148.2 26.1 231 77-326 49-294 (297)
133 1xfd_A DIP, dipeptidyl aminope 99.7 1.7E-16 5.8E-21 183.7 16.2 216 80-321 27-323 (723)
134 2ecf_A Dipeptidyl peptidase IV 99.7 3E-15 1E-19 174.0 23.6 237 76-339 43-370 (741)
135 1nir_A Nitrite reductase; hemo 99.7 1.5E-14 5.1E-19 165.3 28.0 237 80-321 148-438 (543)
136 1ri6_A Putative isomerase YBHE 99.7 2.1E-14 7.1E-19 148.5 25.4 175 84-260 8-208 (343)
137 3vgz_A Uncharacterized protein 99.6 6.1E-14 2.1E-18 146.2 28.6 242 75-324 46-334 (353)
138 1nir_A Nitrite reductase; hemo 99.6 7.2E-14 2.5E-18 159.6 30.7 243 74-321 183-496 (543)
139 1z68_A Fibroblast activation p 99.6 1.5E-15 5.2E-20 176.3 15.8 238 83-344 28-352 (719)
140 1xfd_A DIP, dipeptidyl aminope 99.6 2.3E-14 7.7E-19 165.9 25.5 240 75-337 66-394 (723)
141 2ecf_A Dipeptidyl peptidase IV 99.6 1.3E-14 4.4E-19 168.6 23.2 228 107-342 36-325 (741)
142 2z3z_A Dipeptidyl aminopeptida 99.6 3.4E-14 1.2E-18 164.4 25.8 234 79-340 130-437 (706)
143 3hfq_A Uncharacterized protein 99.6 6.7E-14 2.3E-18 147.2 25.5 173 80-255 50-259 (347)
144 3u4y_A Uncharacterized protein 99.6 1.4E-13 4.9E-18 142.9 27.4 177 75-254 45-239 (331)
145 2oit_A Nucleoporin 214KDA; NH2 99.6 1.3E-14 4.6E-19 160.8 20.4 148 74-223 97-280 (434)
146 1pby_B Quinohemoprotein amine 99.6 7.5E-14 2.6E-18 143.9 24.5 141 82-224 2-166 (337)
147 4a5s_A Dipeptidyl peptidase 4 99.6 3.9E-14 1.3E-18 166.5 24.3 241 80-345 27-360 (740)
148 2z3z_A Dipeptidyl aminopeptida 99.6 1.3E-13 4.4E-18 159.6 23.0 235 82-345 93-398 (706)
149 3vgz_A Uncharacterized protein 99.6 4.8E-13 1.6E-17 139.4 24.9 174 76-255 147-333 (353)
150 1k32_A Tricorn protease; prote 99.6 3.1E-13 1E-17 164.9 26.6 169 79-255 306-491 (1045)
151 3pe7_A Oligogalacturonate lyas 99.5 4.7E-13 1.6E-17 142.1 23.9 243 79-345 45-336 (388)
152 1jmx_B Amine dehydrogenase; ox 99.5 3.5E-13 1.2E-17 139.9 22.4 143 79-224 9-178 (349)
153 1z68_A Fibroblast activation p 99.5 9.1E-14 3.1E-18 161.4 18.9 175 76-252 66-328 (719)
154 1pby_B Quinohemoprotein amine 99.5 4.6E-13 1.6E-17 138.0 22.2 167 79-254 43-298 (337)
155 1k32_A Tricorn protease; prote 99.5 3.2E-13 1.1E-17 164.7 24.1 238 80-340 347-639 (1045)
156 1ri6_A Putative isomerase YBHE 99.5 1.4E-12 4.7E-17 134.8 25.2 175 76-254 44-249 (343)
157 4a5s_A Dipeptidyl peptidase 4 99.5 3.3E-13 1.1E-17 158.6 22.4 225 110-340 19-296 (740)
158 3o4h_A Acylamino-acid-releasin 99.5 2.8E-13 9.7E-18 153.7 19.5 166 77-251 29-210 (582)
159 3hfq_A Uncharacterized protein 99.5 1E-12 3.4E-17 138.2 22.0 147 105-254 37-205 (347)
160 1jmx_B Amine dehydrogenase; ox 99.5 1.1E-12 3.7E-17 136.1 19.0 167 78-254 51-313 (349)
161 3pe7_A Oligogalacturonate lyas 99.5 2.8E-12 9.5E-17 136.2 21.7 216 103-342 26-277 (388)
162 3scy_A Hypothetical bacterial 99.4 1.6E-11 5.6E-16 129.8 26.2 175 77-255 57-278 (361)
163 3scy_A Hypothetical bacterial 99.4 2.4E-11 8.1E-16 128.6 27.3 172 80-254 108-324 (361)
164 1jof_A Carboxy-CIS,CIS-muconat 99.4 6.5E-12 2.2E-16 134.4 21.7 179 75-255 45-274 (365)
165 3azo_A Aminopeptidase; POP fam 99.4 7.2E-12 2.5E-16 143.8 20.6 234 81-348 90-379 (662)
166 3c5m_A Oligogalacturonate lyas 99.4 7.5E-12 2.6E-16 132.4 18.9 203 91-322 60-301 (396)
167 3o4h_A Acylamino-acid-releasin 99.4 3E-12 1E-16 145.2 15.5 165 78-255 119-301 (582)
168 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.7E-11 9.1E-16 129.6 22.0 145 107-254 39-211 (365)
169 3azo_A Aminopeptidase; POP fam 99.4 2.5E-11 8.5E-16 139.3 21.3 165 88-255 44-260 (662)
170 2xdw_A Prolyl endopeptidase; a 99.3 2.7E-10 9.4E-15 133.0 27.6 237 77-340 132-416 (710)
171 3fvz_A Peptidyl-glycine alpha- 99.3 9.4E-10 3.2E-14 116.2 27.5 159 91-252 69-256 (329)
172 2bkl_A Prolyl endopeptidase; m 99.3 2.6E-10 8.9E-15 133.0 23.6 240 77-345 128-404 (695)
173 3c5m_A Oligogalacturonate lyas 99.2 9.4E-11 3.2E-15 124.0 14.0 209 108-340 36-275 (396)
174 2dg1_A DRP35, lactonase; beta 99.2 9.4E-09 3.2E-13 107.1 28.6 174 79-253 54-250 (333)
175 3e5z_A Putative gluconolactona 99.2 2.9E-09 9.8E-14 109.7 23.1 172 80-253 39-235 (296)
176 2gop_A Trilobed protease; beta 99.1 4E-09 1.4E-13 110.2 22.3 153 90-255 42-234 (347)
177 2oiz_A Aromatic amine dehydrog 99.1 1.8E-09 6E-14 116.4 19.1 96 89-187 29-146 (361)
178 3dsm_A Uncharacterized protein 99.1 1.4E-08 4.8E-13 107.5 25.7 172 79-254 52-243 (328)
179 1xip_A Nucleoporin NUP159; bet 99.1 1.3E-09 4.6E-14 119.8 17.3 170 73-255 41-233 (388)
180 2gop_A Trilobed protease; beta 99.1 8.5E-09 2.9E-13 107.7 22.6 158 79-253 68-279 (347)
181 2oiz_A Aromatic amine dehydrog 99.1 3E-09 1E-13 114.6 19.2 170 74-248 54-360 (361)
182 2xdw_A Prolyl endopeptidase; a 99.1 9E-09 3.1E-13 120.1 24.6 146 105-255 122-305 (710)
183 1q7f_A NHL, brain tumor CG1071 99.1 2.9E-08 1E-12 101.2 25.1 167 79-252 86-267 (286)
184 3fvz_A Peptidyl-glycine alpha- 99.1 6.6E-09 2.3E-13 109.6 20.2 174 75-254 96-309 (329)
185 3no2_A Uncharacterized protein 99.0 1.5E-08 5.1E-13 105.5 21.7 166 79-254 3-183 (276)
186 2dg1_A DRP35, lactonase; beta 99.0 4.3E-09 1.5E-13 109.7 15.8 147 103-254 40-200 (333)
187 1q7f_A NHL, brain tumor CG1071 99.0 6.9E-08 2.4E-12 98.4 24.4 170 77-253 37-224 (286)
188 1yr2_A Prolyl oligopeptidase; 99.0 1.5E-08 5E-13 119.2 21.8 237 78-344 171-447 (741)
189 3iuj_A Prolyl endopeptidase; h 99.0 2.4E-08 8.2E-13 116.8 22.5 241 77-346 136-413 (693)
190 2bkl_A Prolyl endopeptidase; m 98.9 1.8E-08 6.2E-13 117.4 19.1 141 105-254 118-288 (695)
191 3g4e_A Regucalcin; six bladed 98.9 3.8E-07 1.3E-11 94.7 26.0 178 72-253 16-216 (297)
192 1qks_A Cytochrome CD1 nitrite 98.9 1.5E-07 5E-12 108.4 24.9 170 82-255 168-361 (567)
193 3e5z_A Putative gluconolactona 98.9 6.8E-08 2.3E-12 99.3 19.9 171 76-255 75-276 (296)
194 1rwi_B Serine/threonine-protei 98.9 1.2E-07 4.2E-12 95.2 20.9 168 80-252 77-250 (270)
195 3dsm_A Uncharacterized protein 98.9 1.2E-07 4.1E-12 100.3 21.1 173 75-254 89-285 (328)
196 1qks_A Cytochrome CD1 nitrite 98.8 8.3E-07 2.8E-11 102.1 28.8 177 75-254 202-407 (567)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.8E-06 6.2E-11 88.4 28.5 163 87-253 42-243 (314)
198 2ghs_A AGR_C_1268P; regucalcin 98.8 1.7E-06 5.8E-11 91.3 26.2 169 79-253 59-247 (326)
199 1yr2_A Prolyl oligopeptidase; 98.8 3E-07 1E-11 108.0 22.2 145 106-255 161-335 (741)
200 3iuj_A Prolyl endopeptidase; h 98.8 2.1E-07 7.3E-12 108.7 20.4 210 105-344 126-365 (693)
201 1rwi_B Serine/threonine-protei 98.8 3.3E-07 1.1E-11 92.0 18.9 168 80-253 34-209 (270)
202 3dr2_A Exported gluconolactona 98.7 5.3E-07 1.8E-11 93.8 20.7 175 74-252 50-255 (305)
203 3no2_A Uncharacterized protein 98.7 7.9E-07 2.7E-11 92.4 20.1 167 78-253 45-230 (276)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.5E-06 5.3E-11 88.9 21.2 166 82-254 83-286 (314)
205 2z2n_A Virginiamycin B lyase; 98.6 7.8E-06 2.7E-10 82.5 24.8 164 82-253 26-200 (299)
206 2z2n_A Virginiamycin B lyase; 98.6 8.4E-06 2.9E-10 82.2 23.9 168 80-253 67-242 (299)
207 3g4e_A Regucalcin; six bladed 98.6 5.2E-06 1.8E-10 86.0 22.8 175 76-257 60-263 (297)
208 2mad_H Methylamine dehydrogena 98.6 7E-06 2.4E-10 89.1 23.9 170 75-254 71-336 (373)
209 2mad_H Methylamine dehydrogena 98.6 3.9E-05 1.3E-09 83.3 29.2 125 92-224 48-198 (373)
210 2ece_A 462AA long hypothetical 98.5 1E-05 3.4E-10 90.4 24.5 174 79-255 94-340 (462)
211 3hrp_A Uncharacterized protein 98.5 7.2E-06 2.5E-10 90.0 20.9 171 75-252 136-339 (409)
212 2ghs_A AGR_C_1268P; regucalcin 98.5 1.6E-05 5.4E-10 83.8 22.4 165 83-256 102-292 (326)
213 2qc5_A Streptogramin B lactona 98.5 3.9E-05 1.3E-09 77.4 24.3 167 80-253 30-205 (300)
214 2qc5_A Streptogramin B lactona 98.4 4.8E-05 1.6E-09 76.7 24.4 167 80-253 72-247 (300)
215 2qe8_A Uncharacterized protein 98.4 6.3E-06 2.2E-10 87.4 18.6 148 105-252 64-264 (343)
216 3sjl_D Methylamine dehydrogena 98.4 1.3E-05 4.3E-10 88.1 21.2 241 75-339 83-364 (386)
217 1xip_A Nucleoporin NUP159; bet 98.4 1.4E-06 4.8E-11 95.7 13.5 120 80-209 96-231 (388)
218 3hrp_A Uncharacterized protein 98.4 1.7E-05 5.9E-10 87.0 21.8 168 79-251 180-395 (409)
219 3c75_H MADH, methylamine dehyd 98.4 3.6E-05 1.2E-09 85.6 23.6 97 91-190 99-218 (426)
220 3nok_A Glutaminyl cyclase; bet 98.3 3.1E-05 1.1E-09 80.8 18.1 171 80-258 64-257 (268)
221 3c75_H MADH, methylamine dehyd 98.2 2.6E-05 8.9E-10 86.7 18.6 133 117-254 82-246 (426)
222 2qe8_A Uncharacterized protein 98.2 4.3E-05 1.5E-09 81.0 19.0 163 90-255 92-310 (343)
223 3dr2_A Exported gluconolactona 98.2 1.8E-05 6.3E-10 82.0 15.5 139 107-254 44-206 (305)
224 3sjl_D Methylamine dehydrogena 98.2 1.1E-05 3.8E-10 88.5 14.3 138 113-254 38-206 (386)
225 2ece_A 462AA long hypothetical 98.2 3.8E-05 1.3E-09 85.7 18.5 164 91-255 164-400 (462)
226 3nol_A Glutamine cyclotransfer 98.2 3.2E-05 1.1E-09 80.5 16.6 173 80-258 52-247 (262)
227 2iwa_A Glutamine cyclotransfer 98.1 7.4E-05 2.5E-09 78.0 18.2 168 83-258 33-228 (266)
228 1fwx_A Nitrous oxide reductase 98.1 4.4E-05 1.5E-09 87.8 16.4 172 80-254 100-348 (595)
229 2hz6_A Endoplasmic reticulum t 98.1 2.6E-07 8.7E-12 99.9 -2.0 139 80-225 8-153 (369)
230 3mbr_X Glutamine cyclotransfer 98.1 0.00019 6.4E-09 74.0 19.4 174 80-258 30-226 (243)
231 1kb0_A Quinohemoprotein alcoho 98.1 8.4E-05 2.9E-09 87.0 18.7 160 92-254 284-538 (677)
232 1mda_H Methylamine dehydrogena 98.1 4.3E-05 1.5E-09 83.3 15.1 87 92-181 47-158 (368)
233 2xe4_A Oligopeptidase B; hydro 98.1 0.00068 2.3E-08 80.1 26.6 238 79-346 184-466 (751)
234 2fp8_A Strictosidine synthase; 98.0 0.00059 2E-08 71.1 21.4 170 81-254 30-247 (322)
235 1yiq_A Quinohemoprotein alcoho 98.0 0.00024 8.1E-09 83.4 20.2 161 92-255 276-537 (689)
236 1npe_A Nidogen, entactin; glyc 98.0 0.00073 2.5E-08 68.4 21.4 143 109-254 37-185 (267)
237 3nol_A Glutamine cyclotransfer 97.9 0.0004 1.4E-08 72.2 18.2 191 110-323 45-244 (262)
238 3nok_A Glutaminyl cyclase; bet 97.9 0.00042 1.4E-08 72.2 17.7 189 109-321 56-252 (268)
239 2iwa_A Glutamine cyclotransfer 97.9 0.0011 3.8E-08 69.1 20.8 139 109-252 22-166 (266)
240 2xe4_A Oligopeptidase B; hydro 97.7 0.00095 3.3E-08 78.8 20.0 144 105-255 170-338 (751)
241 2hz6_A Endoplasmic reticulum t 97.7 1.7E-05 6E-10 85.5 4.6 126 118-254 8-137 (369)
242 3mbr_X Glutamine cyclotransfer 97.7 0.0043 1.5E-07 63.8 21.2 196 108-323 21-223 (243)
243 1kb0_A Quinohemoprotein alcoho 97.7 0.00068 2.3E-08 79.3 17.1 78 111-189 246-354 (677)
244 3hxj_A Pyrrolo-quinoline quino 97.6 0.00063 2.1E-08 69.8 14.8 159 81-251 107-270 (330)
245 1npe_A Nidogen, entactin; glyc 97.6 0.0097 3.3E-07 60.0 22.2 162 81-248 91-263 (267)
246 1fwx_A Nitrous oxide reductase 97.5 0.00021 7.1E-09 82.2 10.3 163 90-255 174-407 (595)
247 3v65_B Low-density lipoprotein 97.5 0.007 2.4E-07 65.6 21.5 165 87-254 92-264 (386)
248 1ijq_A LDL receptor, low-densi 97.5 0.018 6E-07 60.4 23.9 162 90-254 9-182 (316)
249 2p4o_A Hypothetical protein; p 97.5 0.014 4.7E-07 60.5 22.3 168 81-252 43-228 (306)
250 3v64_C Agrin; beta propeller, 97.4 0.014 4.8E-07 62.3 22.2 163 89-254 51-221 (349)
251 3hxj_A Pyrrolo-quinoline quino 97.4 0.0017 5.7E-08 66.6 14.3 161 79-251 145-310 (330)
252 1kv9_A Type II quinohemoprotei 97.4 0.0035 1.2E-07 73.1 18.3 160 92-255 271-520 (668)
253 1yiq_A Quinohemoprotein alcoho 97.3 0.0019 6.6E-08 75.6 15.5 81 128-210 454-537 (689)
254 4a2l_A BT_4663, two-component 97.3 0.023 8E-07 66.9 24.6 174 75-254 361-561 (795)
255 3p5b_L Low density lipoprotein 97.3 0.027 9.3E-07 61.3 23.0 166 86-254 87-264 (400)
256 2fp8_A Strictosidine synthase; 97.2 0.0068 2.3E-07 63.0 16.3 140 109-254 20-203 (322)
257 1mda_H Methylamine dehydrogena 97.2 0.00081 2.8E-08 73.2 9.0 89 130-221 47-158 (368)
258 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.0044 1.5E-07 65.6 14.2 139 81-225 53-211 (376)
259 3v64_C Agrin; beta propeller, 97.1 0.065 2.2E-06 57.1 23.4 169 80-253 84-261 (349)
260 4a2l_A BT_4663, two-component 97.1 0.058 2E-06 63.5 25.2 178 73-253 312-515 (795)
261 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.0028 9.7E-08 67.0 11.8 132 81-218 239-375 (376)
262 1flg_A Protein (quinoprotein e 97.1 0.017 5.8E-07 66.3 19.1 162 91-255 291-548 (582)
263 2ad6_A Methanol dehydrogenase 97.0 0.01 3.4E-07 68.0 16.6 136 117-255 311-526 (571)
264 4hw6_A Hypothetical protein, I 97.0 0.03 1E-06 61.8 19.9 139 81-221 152-304 (433)
265 3v65_B Low-density lipoprotein 97.0 0.051 1.7E-06 58.7 21.4 169 80-253 127-304 (386)
266 3tc9_A Hypothetical hydrolase; 97.0 0.016 5.6E-07 63.7 17.6 139 81-221 149-301 (430)
267 1ijq_A LDL receptor, low-densi 96.9 0.21 7.2E-06 52.1 24.3 167 81-253 42-224 (316)
268 3sov_A LRP-6, low-density lipo 96.8 0.043 1.5E-06 57.9 18.3 163 89-254 11-184 (318)
269 3qqz_A Putative uncharacterize 96.8 0.086 2.9E-06 54.4 20.1 152 102-255 21-192 (255)
270 3v9f_A Two-component system se 96.8 0.051 1.8E-06 63.8 20.7 169 77-253 369-556 (781)
271 1w6s_A Methanol dehydrogenase 96.8 0.051 1.8E-06 62.7 20.1 161 91-255 278-535 (599)
272 3tc9_A Hypothetical hydrolase; 96.8 0.016 5.5E-07 63.8 15.1 142 108-254 137-288 (430)
273 3m0c_C LDL receptor, low-densi 96.7 0.1 3.4E-06 62.3 22.8 166 86-254 399-576 (791)
274 3p5b_L Low density lipoprotein 96.6 0.27 9.4E-06 53.3 23.5 170 80-254 123-307 (400)
275 2p4o_A Hypothetical protein; p 96.6 0.081 2.8E-06 54.6 18.4 160 92-255 96-277 (306)
276 3v9f_A Two-component system se 96.5 0.17 6E-06 59.2 22.5 173 75-254 317-513 (781)
277 4a0p_A LRP6, LRP-6, low-densit 96.5 0.35 1.2E-05 56.0 24.4 162 89-254 13-184 (628)
278 3amr_A 3-phytase; beta-propell 96.4 0.11 3.9E-06 56.0 18.4 173 82-255 41-251 (355)
279 3qqz_A Putative uncharacterize 96.4 0.54 1.9E-05 48.3 22.9 165 87-255 45-242 (255)
280 3m0c_C LDL receptor, low-densi 96.4 0.36 1.2E-05 57.5 24.4 143 81-223 436-591 (791)
281 3sov_A LRP-6, low-density lipo 96.4 0.43 1.5E-05 50.1 22.6 169 80-253 46-224 (318)
282 1k3i_A Galactose oxidase precu 96.2 0.091 3.1E-06 60.7 17.4 176 79-255 252-530 (656)
283 2p9w_A MAL S 1 allergenic prot 96.2 0.093 3.2E-06 56.2 16.0 143 109-254 14-203 (334)
284 2xbg_A YCF48-like protein; pho 96.1 0.25 8.5E-06 51.8 19.1 141 105-254 160-310 (327)
285 2p9w_A MAL S 1 allergenic prot 96.1 0.16 5.5E-06 54.4 17.5 141 80-221 24-215 (334)
286 2ad6_A Methanol dehydrogenase 96.1 0.016 5.5E-07 66.3 10.3 81 128-210 443-525 (571)
287 3sre_A PON1, serum paraoxonase 96.1 0.42 1.4E-05 51.6 20.6 161 89-253 81-284 (355)
288 3kya_A Putative phosphatase; s 96.1 0.13 4.5E-06 58.0 17.2 140 81-221 152-341 (496)
289 1flg_A Protein (quinoprotein e 96.1 0.023 8E-07 65.2 11.3 82 128-211 465-549 (582)
290 3kya_A Putative phosphatase; s 96.1 0.097 3.3E-06 59.1 16.1 145 109-254 140-328 (496)
291 3s94_A LRP-6, low-density lipo 95.9 0.69 2.4E-05 53.4 23.1 164 88-254 15-189 (619)
292 3s25_A Hypothetical 7-bladed b 95.9 0.29 9.8E-06 51.4 18.1 187 112-346 57-263 (302)
293 1kv9_A Type II quinohemoprotei 95.9 0.06 2.1E-06 62.7 13.8 144 81-225 117-337 (668)
294 1n7d_A LDL receptor, low-densi 95.8 0.014 4.7E-07 68.6 8.0 163 89-254 384-558 (699)
295 2ism_A Putative oxidoreductase 95.7 0.28 9.7E-06 52.2 17.2 99 109-210 32-153 (352)
296 4hw6_A Hypothetical protein, I 95.6 0.14 4.7E-06 56.5 14.8 144 108-254 139-291 (433)
297 3a9g_A Putative uncharacterize 95.5 0.28 9.6E-06 52.4 16.2 101 108-210 29-153 (354)
298 1cru_A Protein (soluble quinop 95.4 0.43 1.5E-05 52.9 18.1 102 109-210 28-162 (454)
299 3amr_A 3-phytase; beta-propell 95.3 0.49 1.7E-05 51.1 17.4 129 90-220 98-262 (355)
300 4a0p_A LRP6, LRP-6, low-densit 95.2 1.8 6.1E-05 50.0 23.1 168 81-254 49-224 (628)
301 2g8s_A Glucose/sorbosone dehyd 95.2 0.36 1.2E-05 51.4 15.8 143 109-253 19-214 (353)
302 3s94_A LRP-6, low-density lipo 95.1 3.3 0.00011 47.7 24.7 163 88-253 323-496 (619)
303 3das_A Putative oxidoreductase 94.9 0.75 2.6E-05 49.4 17.6 142 108-250 32-216 (347)
304 2xbg_A YCF48-like protein; pho 94.8 0.9 3.1E-05 47.5 17.4 143 106-252 120-266 (327)
305 3pbp_A Nucleoporin NUP82; beta 94.6 1.2 4.1E-05 49.4 18.3 137 78-217 29-208 (452)
306 1k3i_A Galactose oxidase precu 94.4 0.19 6.4E-06 58.0 12.0 111 112-223 190-325 (656)
307 1n7d_A LDL receptor, low-densi 94.0 0.083 2.9E-06 61.9 8.0 138 85-222 422-572 (699)
308 3s25_A Hypothetical 7-bladed b 93.8 1.3 4.5E-05 46.3 16.1 180 117-345 23-223 (302)
309 1w6s_A Methanol dehydrogenase 93.8 0.76 2.6E-05 52.9 15.3 107 81-190 62-200 (599)
310 3ott_A Two-component system se 93.2 11 0.00038 43.6 24.2 166 77-253 69-249 (758)
311 1tl2_A L10, protein (tachylect 93.1 0.53 1.8E-05 47.8 11.0 138 109-253 42-199 (236)
312 3pbp_A Nucleoporin NUP82; beta 92.0 4.4 0.00015 44.9 17.2 130 118-252 31-196 (452)
313 1tl2_A L10, protein (tachylect 91.6 0.6 2E-05 47.4 9.1 130 119-253 4-152 (236)
314 2xzh_A Clathrin heavy chain 1; 91.6 7.4 0.00025 41.8 17.9 120 128-255 48-171 (365)
315 2ism_A Putative oxidoreductase 91.5 2.1 7.3E-05 45.3 14.0 107 144-254 25-153 (352)
316 3das_A Putative oxidoreductase 90.6 2.6 8.7E-05 45.2 13.6 113 142-255 24-159 (347)
317 3sre_A PON1, serum paraoxonase 90.2 12 0.00041 40.1 18.4 142 110-255 52-240 (355)
318 3a9g_A Putative uncharacterize 90.2 3 0.0001 44.3 13.7 110 143-255 22-154 (354)
319 1cru_A Protein (soluble quinop 89.5 4.2 0.00014 44.9 14.6 112 143-255 20-163 (454)
320 3ii7_A Kelch-like protein 7; p 88.9 13 0.00043 37.5 16.8 139 80-224 55-228 (306)
321 1bpo_A Protein (clathrin); cla 88.3 9.9 0.00034 42.3 16.1 120 128-255 47-170 (494)
322 3ott_A Two-component system se 88.1 43 0.0015 38.6 22.7 166 81-253 112-296 (758)
323 2vpj_A Kelch-like protein 12; 87.7 20 0.0007 35.8 17.4 128 91-224 78-234 (301)
324 3ii7_A Kelch-like protein 7; p 87.0 23 0.00077 35.6 17.3 129 90-224 23-181 (306)
325 2wg3_C Hedgehog-interacting pr 85.4 25 0.00084 39.0 17.7 103 109-211 15-158 (463)
326 2vpj_A Kelch-like protein 12; 84.3 20 0.0007 35.8 15.3 126 91-223 128-280 (301)
327 2xn4_A Kelch-like protein 2; s 83.3 20 0.0007 35.9 14.8 126 92-223 125-278 (302)
328 2g8s_A Glucose/sorbosone dehyd 82.9 28 0.00097 36.5 16.3 132 75-208 23-214 (353)
329 2xzh_A Clathrin heavy chain 1; 82.4 42 0.0014 36.1 16.9 139 90-237 48-201 (365)
330 2xn4_A Kelch-like protein 2; s 81.6 37 0.0013 33.9 16.0 128 91-224 77-232 (302)
331 4asc_A Kelch repeat and BTB do 80.4 37 0.0013 34.3 15.6 129 91-224 13-177 (315)
332 1zgk_A Kelch-like ECH-associat 80.4 33 0.0011 34.7 15.2 128 91-224 90-243 (308)
333 1zgk_A Kelch-like ECH-associat 79.5 24 0.00081 35.7 13.8 127 91-223 137-289 (308)
334 3sbq_A Nitrous-oxide reductase 79.5 4.7 0.00016 46.2 8.8 101 108-210 323-453 (638)
335 1bpo_A Protein (clathrin); cla 77.9 58 0.002 36.3 16.7 143 90-241 47-204 (494)
336 4asc_A Kelch repeat and BTB do 77.2 52 0.0018 33.2 15.6 101 118-223 98-223 (315)
337 3ei3_A DNA damage-binding prot 75.2 1.1E+02 0.0036 38.0 20.1 93 130-224 808-916 (1158)
338 3ei3_A DNA damage-binding prot 72.4 1.9E+02 0.0065 35.7 22.9 137 108-248 514-664 (1158)
339 2woz_A Kelch repeat and BTB do 70.3 94 0.0032 31.2 16.5 125 93-223 80-233 (318)
340 3b7f_A Glycosyl hydrolase, BNR 69.0 1.2E+02 0.0039 31.8 17.1 108 108-217 55-204 (394)
341 2be1_A Serine/threonine-protei 67.5 4.2 0.00014 43.4 4.5 108 119-226 10-135 (339)
342 2uvk_A YJHT; unknown function, 66.4 1E+02 0.0034 31.5 14.9 99 118-219 65-224 (357)
343 2zwa_A Leucine carboxyl methyl 66.3 62 0.0021 37.4 14.5 132 92-224 469-638 (695)
344 4gq2_M Nucleoporin NUP120; bet 65.6 84 0.0029 37.9 15.9 38 109-146 237-274 (950)
345 2wg3_C Hedgehog-interacting pr 65.2 48 0.0017 36.6 12.7 105 150-255 14-158 (463)
346 3sbq_A Nitrous-oxide reductase 64.4 22 0.00075 40.8 9.6 123 131-255 300-454 (638)
347 4hvt_A Ritya.17583.B, post-pro 60.9 2.5E+02 0.0084 32.7 25.0 238 79-345 140-436 (711)
348 2zwa_A Leucine carboxyl methyl 60.2 1.1E+02 0.0038 35.2 15.2 110 112-223 445-579 (695)
349 2uvk_A YJHT; unknown function, 59.0 1.6E+02 0.0054 29.9 16.6 80 129-210 168-260 (357)
350 1xi4_A Clathrin heavy chain; a 58.8 29 0.001 44.0 10.2 120 128-255 47-170 (1630)
351 2woz_A Kelch repeat and BTB do 52.4 1.9E+02 0.0066 28.9 16.4 127 93-223 26-186 (318)
352 1vqy_A Hypothetical protein AG 50.7 7.6 0.00026 34.7 2.5 21 620-640 11-31 (116)
353 1xi4_A Clathrin heavy chain; a 48.6 4.9E+02 0.017 33.3 18.5 136 89-225 123-293 (1630)
354 3q6k_A 43.2 kDa salivary prote 42.7 1.6E+02 0.0055 31.7 11.8 92 130-221 124-253 (381)
355 4gq2_M Nucleoporin NUP120; bet 42.7 1.6E+02 0.0056 35.4 13.1 38 151-189 237-274 (950)
356 2be1_A Serine/threonine-protei 38.9 48 0.0016 35.2 6.8 110 82-191 11-140 (339)
357 1sqj_A OXG-RCBH, oligoxylogluc 31.0 6.4E+02 0.022 29.3 15.5 142 107-253 14-187 (789)
358 4fhn_B Nucleoporin NUP120; pro 28.8 42 0.0014 41.3 4.9 38 109-146 239-276 (1139)
359 3b7f_A Glycosyl hydrolase, BNR 28.4 5.1E+02 0.017 26.7 17.7 108 109-218 116-259 (394)
360 3zwu_A Alkaline phosphatase PH 28.2 1E+02 0.0035 35.3 7.6 58 194-254 478-549 (592)
361 4a9v_A PHOX; hydrolase, beta-p 28.0 1.7E+02 0.0057 33.6 9.2 59 151-210 477-549 (592)
362 4hvt_A Ritya.17583.B, post-pro 26.5 6.7E+02 0.023 28.9 14.4 112 109-221 130-278 (711)
363 3zwu_A Alkaline phosphatase PH 25.4 1.5E+02 0.0052 33.9 8.4 58 152-210 478-549 (592)
364 4a9v_A PHOX; hydrolase, beta-p 25.4 1.7E+02 0.0057 33.6 8.6 60 193-255 477-550 (592)
365 4fhn_B Nucleoporin NUP120; pro 25.3 52 0.0018 40.4 4.9 37 152-189 240-276 (1139)
366 3f7f_A Nucleoporin NUP120; nuc 24.4 1E+02 0.0035 36.2 6.7 37 109-147 223-259 (729)
367 3f7f_A Nucleoporin NUP120; nuc 23.4 94 0.0032 36.5 6.2 30 161-190 230-259 (729)
368 4i8i_A Hypothetical protein; 5 21.9 13 0.00045 38.3 -1.2 23 564-587 198-221 (271)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=6.7e-26 Score=243.62 Aligned_cols=212 Identities=12% Similarity=0.112 Sum_probs=167.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~--------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
....|++++.|++|++||+.+++ +.+|.+.|++++|+|||++|++|+.|++|++||+.+++++..+.+|.+.
T Consensus 92 ~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~ 171 (344)
T 4gqb_B 92 GERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ 171 (344)
T ss_dssp TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc
Confidence 34689999999999999998763 3489999999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec---CCCCeEEEEEcCC-CCEEEEEECC-eEEEEEcCCCcccc
Q 004785 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHAS-GELLAVASGH-KLYIWRYNMREETS 226 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~---h~~~V~sVafSPd-G~~LAsgSdd-~I~VWDl~t~~~~~ 226 (730)
|.+++|+|++..+|++++.|++|++||+++++....+. +...+.+++|+|+ +++|++|+.+ .|+|||+++++.+
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~- 250 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV- 250 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC-
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE-
Confidence 99999999566799999999999999999998877754 4567999999995 5688888854 5999999988754
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCc
Q 004785 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPF 306 (730)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpi 306 (730)
..+.+|...|++++|+|+|..++++++.+ ..+.+|+...++... ..+....+
T Consensus 251 --~~~~~h~~~v~~v~fsp~g~~~lasgs~D----------------------~~i~vwd~~~~~~~~----~~~H~~~V 302 (344)
T 4gqb_B 251 --LSSAVHSQCVTGLVFSPHSVPFLASLSED----------------------CSLAVLDSSLSELFR----SQAHRDFV 302 (344)
T ss_dssp --EEEECCSSCEEEEEECSSSSCCEEEEETT----------------------SCEEEECTTCCEEEE----ECCCSSCE
T ss_pred --EEEcCCCCCEEEEEEccCCCeEEEEEeCC----------------------CeEEEEECCCCcEEE----EcCCCCCE
Confidence 37788999999999999996555544311 123333332222111 11233456
Q ss_pred eeeeEecCCCEEEE
Q 004785 307 LRPSFVRDDERISL 320 (730)
Q Consensus 307 l~p~FSpDg~rI~~ 320 (730)
..++|+||++++++
T Consensus 303 ~~v~~sp~~~~lla 316 (344)
T 4gqb_B 303 RDATWSPLNHSLLT 316 (344)
T ss_dssp EEEEECSSSTTEEE
T ss_pred EEEEEeCCCCeEEE
Confidence 67899999988765
No 2
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=1.9e-25 Score=241.25 Aligned_cols=275 Identities=15% Similarity=0.159 Sum_probs=205.1
Q ss_pred CCCCCCcceecccccccccCCCCccceeeeccCcceeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEeCCCC-------
Q 004785 29 NHRNSRLRNVFGLLAQREVAPRTKHSSKRLLGETARKCSGSFSQIFEAGRDARRGLASWVEAESLHHLRPKYC------- 101 (730)
Q Consensus 29 ~~rsSk~r~If~~~~krEis~~~~~~~k~~wd~~~~~~s~s~s~ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~------- 101 (730)
-+|.||||++|+...+++.++.+.+.....|+.....++..+. ..+++++.|+.|++|+....
T Consensus 5 ~~~~sk~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~g~i~v~~~~~~~~~~~~~ 74 (402)
T 2aq5_A 5 VVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFM----------ALICEASGGGAFLVLPLGKTGRVDKNV 74 (402)
T ss_dssp ---CCTTTTCEEEECCGGGSEESCCBCCCCCSSCSEEECSSEE----------EEEBCCSSSCCEEEEETTCCEECCTTC
T ss_pred ccCCCCCccccCcCCChhhcEecceeecCccCCCcEEECCCeE----------EEEEEEcCCCEEEEEECccCCCCCCCC
Confidence 3689999999999999999999999888888877665553221 22335677899999997542
Q ss_pred -CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCC-------eEEEEEecCCCCcEEEEEccCCCCEEEEEeCCC
Q 004785 102 -PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTG-------SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH 172 (730)
Q Consensus 102 -~L~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg-------~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dg 172 (730)
.+.+|.+.|++++|+| ++++|++|+.|++|+|||+.++ +.+..+.+|...|.+++|+|++.+++++++.|+
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 4678999999999999 9999999999999999999988 668889999999999999994347999999999
Q ss_pred cEEEEECCCCeEEEEe---cCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeEE-ecCCCC-eEEEEEccC
Q 004785 173 EVRLWNASTAECIGSR---DFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRIV-LRTRRS-LRAVHFHPH 246 (730)
Q Consensus 173 tVrLWDl~tg~~i~~l---~h~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t~~~~~~~~~l-~~h~~~-V~sVaFSPd 246 (730)
+|++||+.+++.+..+ .|...|.+++|+|+|++|++++. +.|++||+++++... .+ ..|... +..+.|+|+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVA---EKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE---EEECSSCSSSCCEEEECST
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceee---eeccCCCCCcceEEEEcCC
Confidence 9999999999998887 38889999999999999999995 459999999887543 34 566655 899999999
Q ss_pred CCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCC
Q 004785 247 AAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHD 326 (730)
Q Consensus 247 G~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~d 326 (730)
+++++++.. .. ....+.+|+.......... ........+..+.|++|++.+++....+
T Consensus 232 ~~~l~~g~~-~~-------------------~d~~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~g~~d- 289 (402)
T 2aq5_A 232 GKILTTGFS-RM-------------------SERQVALWDTKHLEEPLSL-QELDTSSGVLLPFFDPDTNIVYLCGKGD- 289 (402)
T ss_dssp TEEEEEEEC-TT-------------------CCEEEEEEETTBCSSCSEE-EECCCCSSCEEEEEETTTTEEEEEETTC-
T ss_pred CcEEEEecc-CC-------------------CCceEEEEcCccccCCceE-EeccCCCceeEEEEcCCCCEEEEEEcCC-
Confidence 986665521 00 0013444444333221111 1111233456789999999997643221
Q ss_pred CCcccceeecCCCc
Q 004785 327 SGATRTQQSLRSSS 340 (730)
Q Consensus 327 sgs~~~~~~~~ss~ 340 (730)
..+..+++....
T Consensus 290 --g~i~i~d~~~~~ 301 (402)
T 2aq5_A 290 --SSIRYFEITSEA 301 (402)
T ss_dssp --SCEEEEEECSST
T ss_pred --CeEEEEEecCCC
Confidence 244555555433
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=3.2e-25 Score=242.38 Aligned_cols=241 Identities=18% Similarity=0.236 Sum_probs=197.9
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC
Q 004785 74 FEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (730)
Q Consensus 74 l~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (730)
.++....+..|++++.|++|++||..++ .+.+|.+.|.+++|+|++++|++|+.|++|+|||+.+++++..+.+|.
T Consensus 113 ~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 192 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192 (410)
T ss_dssp EEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCS
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC
Confidence 3444556789999999999999999876 467999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccC
Q 004785 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSS 227 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~ 227 (730)
..|.+++|+| +++++++++.|++|++||+++++++..+ .|...|.++.|+|+|++|++++.+ .|++||+++++...
T Consensus 193 ~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~- 270 (410)
T 1vyh_C 193 HNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA- 270 (410)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-
T ss_pred CCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee-
Confidence 9999999999 8999999999999999999999988776 488899999999999999999955 59999998887543
Q ss_pred CeEEecCCCCeEEEEEccC--------------------CCeEEEEEe-----eCCccCCCcceeEeccCCccc---C--
Q 004785 228 PRIVLRTRRSLRAVHFHPH--------------------AAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y-- 277 (730)
Q Consensus 228 ~~~l~~h~~~V~sVaFSPd--------------------G~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~---~-- 277 (730)
.+..|...|.+++|+|+ |.++++++. +|++..+.....+..+.+.+. +
T Consensus 271 --~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~ 348 (410)
T 1vyh_C 271 --ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348 (410)
T ss_dssp --EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred --EecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC
Confidence 67789999999999997 555666543 888887766655555444321 0
Q ss_pred ---------CCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEE
Q 004785 278 ---------PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 278 ---------p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
....+.+|+........... ....++..+.|+|++..|+..
T Consensus 349 ~g~~l~s~s~D~~i~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 349 GGKFILSCADDKTLRVWDYKNKRCMKTLN---AHEHFVTSLDFHKTAPYVVTG 398 (410)
T ss_dssp SSSCEEEEETTTEEEEECCTTSCCCEEEE---CCSSCEEEEEECSSSSCEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEc---CCCCcEEEEEEcCCCCEEEEE
Confidence 12457788876655544333 244567789999999988763
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=3e-25 Score=235.01 Aligned_cols=236 Identities=14% Similarity=0.159 Sum_probs=192.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcE
Q 004785 80 ARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~ 153 (730)
.+..|++++.|++|++|+.... .+.+|...|.+++|++++.++++++.|++|++||+.+++.+..+..|...+.
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~ 126 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW 126 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC
T ss_pred CCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE
Confidence 4678999999999999998654 3789999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEE
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIV 231 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l 231 (730)
+++|+| +++++++++.|+.|++||+.+++....+. +...|.+++|+|+|++|++++.+ .|++||+++++... .+
T Consensus 127 ~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~---~~ 202 (321)
T 3ow8_A 127 TLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH---TL 202 (321)
T ss_dssp CEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EE
T ss_pred EEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE---EE
Confidence 999999 99999999999999999999998877654 67789999999999999999955 59999999887544 67
Q ss_pred ecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc---C-----------CCCeEEEecCCCCCC
Q 004785 232 LRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y-----------PPPVICMAGAHSSSH 292 (730)
Q Consensus 232 ~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~---~-----------p~~~V~l~d~~s~d~ 292 (730)
..|...|++++|+|++++|++++. +|++........+..+.+.+. + ....+.+|+..++..
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE
Confidence 789999999999999997777654 788876665555444433221 1 124567777665544
Q ss_pred CCcccccCCCCCCceeeeEecCCCEEEEEe
Q 004785 293 PGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (730)
Q Consensus 293 ~~L~~~~~~~slpil~p~FSpDg~rI~~~~ 322 (730)
.... .....+++.+.|++|++.|+...
T Consensus 283 ~~~~---~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 283 VHTF---FDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp EEEE---CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEE---cCCCCcEEEEEECCCCCEEEEEe
Confidence 3332 23445677899999999888643
No 5
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=2.9e-24 Score=223.21 Aligned_cols=241 Identities=20% Similarity=0.282 Sum_probs=193.3
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 76 a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
+....+..|++++.|+.|++|+..++ .+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+++|...
T Consensus 30 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 109 (312)
T 4ery_A 30 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 109 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 33457789999999999999998776 46799999999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCe
Q 004785 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPR 229 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~ 229 (730)
|.+++|+| +++++++++.|++|++||+++++.+..+. |...|.+++|+|++++|++++.+ .|++||+++++... .
T Consensus 110 v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~ 186 (312)
T 4ery_A 110 VFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK--T 186 (312)
T ss_dssp EEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--E
T ss_pred EEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee--E
Confidence 99999999 99999999999999999999999887765 78899999999999999999955 59999999876533 2
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc-----------------CCCCeEEEecC
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR-----------------YPPPVICMAGA 287 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~-----------------~p~~~V~l~d~ 287 (730)
....+...+..++|+|+++++++++. +|++........+..+.+... .....+.+|+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 187 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 23456678999999999998887664 788776554444433222100 01245777876
Q ss_pred CCCCCCCcccccCCCCCCceeeeEecCCCEEEEEe
Q 004785 288 HSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (730)
Q Consensus 288 ~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~ 322 (730)
.+..... ...+....++..+|+|++..++...
T Consensus 267 ~~~~~~~---~~~~h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 267 QTKEIVQ---KLQGHTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp TTCCEEE---EECCCSSCEEEEEECSSSSEEEEEE
T ss_pred CCchhhh---hhhccCCcEEEEeecCcCCceEEEE
Confidence 6554332 2233455677889999999888643
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=9.2e-25 Score=228.29 Aligned_cols=237 Identities=11% Similarity=0.112 Sum_probs=183.0
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
++....+..|++++.|++|++||..++ .+..|...|.+++|+|++++|++|+.|++|++||+.+++.+..+++|.+
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~ 98 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD 98 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC
Confidence 334457889999999999999999876 4678999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeE-EEEe-cCCCCeEEEEEcC-CCCEEEEEEC-CeEEEEEcCCCcccc
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC-IGSR-DFYRPIASIAFHA-SGELLAVASG-HKLYIWRYNMREETS 226 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~-i~~l-~h~~~V~sVafSP-dG~~LAsgSd-d~I~VWDl~t~~~~~ 226 (730)
.|.+++|+| ++.++++++.|++|++||++++.. ...+ .|...|.+++|+| ++.+|++++. +.|++||++......
T Consensus 99 ~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 99 YIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (304)
T ss_dssp CEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE
T ss_pred cEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 999999999 899999999999999999998744 3444 5889999999999 6789999995 459999998765422
Q ss_pred CCeEEecCCCCeEEEEEcc--CCCeEEEEEe-----eCCccCCCcceeEeccCCccc---C-----------CCCeEEEe
Q 004785 227 SPRIVLRTRRSLRAVHFHP--HAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y-----------PPPVICMA 285 (730)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSP--dG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~---~-----------p~~~V~l~ 285 (730)
.....|...+..+.|+| +++++++++. +|++........+..+.+.+. + ....+.+|
T Consensus 178 --~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iW 255 (304)
T 2ynn_A 178 --TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255 (304)
T ss_dssp --EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred --eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 23345678899999987 6676766554 888887666555554433321 0 12345667
Q ss_pred cCCCCCCCCcccccCCCCCCceeeeEecCCCE
Q 004785 286 GAHSSSHPGLAEEVPLITPPFLRPSFVRDDER 317 (730)
Q Consensus 286 d~~s~d~~~L~~~~~~~slpil~p~FSpDg~r 317 (730)
+..+....... .......+.++|.|+++.
T Consensus 256 d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 256 NSSTYKVEKTL---NVGLERSWCIATHPTGRK 284 (304)
T ss_dssp ETTTCCEEEEE---CCSSSSEEEEEECTTCGG
T ss_pred ECCCCceeeec---cCCCccEEEEEECCCCCc
Confidence 65554432222 122335566777777754
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=2.6e-24 Score=226.69 Aligned_cols=186 Identities=15% Similarity=0.206 Sum_probs=160.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 80 ARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~---------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
.+..|++++.|++|++|+.... .+.+|...|.+++|+|+|++|++++.|++|+|||+.+++.+..+.+|..
T Consensus 29 ~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~ 108 (319)
T 3frx_A 29 QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKS 108 (319)
T ss_dssp CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC
Confidence 4578999999999999997531 4679999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCC------CCEEEEEECCe-EEEEEcCCCc
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHAS------GELLAVASGHK-LYIWRYNMRE 223 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPd------G~~LAsgSdd~-I~VWDl~t~~ 223 (730)
.|.+++|+| ++.++++++.|++|++||++.........|...|.++.|+|. +.+|++++.++ |++||+++.+
T Consensus 109 ~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 187 (319)
T 3frx_A 109 DVMSVDIDK-KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187 (319)
T ss_dssp CEEEEEECT-TSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch
Confidence 999999999 999999999999999999986555455679999999999995 44889988554 9999998876
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEe
Q 004785 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLA 269 (730)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~ 269 (730)
... .+.+|...|.+++|+|+|++|++++. +|++........+.
T Consensus 188 ~~~---~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 188 IEA---DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp EEE---EECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred hhe---eecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 533 67789999999999999998887664 78887665544443
No 8
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=8.7e-24 Score=224.34 Aligned_cols=239 Identities=14% Similarity=0.133 Sum_probs=180.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC
Q 004785 80 ARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~-----------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH 148 (730)
++..|++++.|++|++||.... .+.+|...|.+++|+|++.+|++++.|++|++||+++++.+..+.+|
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 6789999999999999998642 36799999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe---cCCCCeEEEEEcCCC----------CEEEEEEC-CeE
Q 004785 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR---DFYRPIASIAFHASG----------ELLAVASG-HKL 214 (730)
Q Consensus 149 ~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l---~h~~~V~sVafSPdG----------~~LAsgSd-d~I 214 (730)
...|.+++|+| +++++++++.|++|++||+......... .|...|.+++|+|++ .+|++++. +.|
T Consensus 118 ~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 196 (343)
T 2xzm_R 118 QSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRL 196 (343)
T ss_dssp CSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEE
T ss_pred CCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEE
Confidence 99999999999 9999999999999999999854433333 477899999999987 78999985 559
Q ss_pred EEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc---C---------
Q 004785 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y--------- 277 (730)
Q Consensus 215 ~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~---~--------- 277 (730)
++||.. ... ...+..|...|.+++|+|+|++|++++. +|++...............+. +
T Consensus 197 ~iwd~~-~~~---~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 197 KVWNTN-FQI---RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAV 272 (343)
T ss_dssp EEEETT-TEE---EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEE
T ss_pred EEEcCC-Cce---eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEE
Confidence 999943 222 2356789999999999999998887664 788743322211111110000 0
Q ss_pred -CCCeEEEecCCCCCCCCccccc----------CCCCCCceeeeEecCCCEEEEEec
Q 004785 278 -PPPVICMAGAHSSSHPGLAEEV----------PLITPPFLRPSFVRDDERISLQHT 323 (730)
Q Consensus 278 -p~~~V~l~d~~s~d~~~L~~~~----------~~~slpil~p~FSpDg~rI~~~~~ 323 (730)
....+.+|+........+.... .+....+..++|+||++.|+....
T Consensus 273 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~ 329 (343)
T 2xzm_R 273 GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT 329 (343)
T ss_dssp EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET
T ss_pred ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC
Confidence 0134666776554433311111 123345668999999999987443
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.93 E-value=1.5e-23 Score=222.54 Aligned_cols=236 Identities=15% Similarity=0.157 Sum_probs=187.2
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC----eEEEEEecC
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG----SCLKVLHGH 148 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg----~~l~~l~gH 148 (730)
...++..|++++.|++|++||..++ .+..|...|.+++|+|++++|++++.|+.|++||+.++ +....+.+|
T Consensus 63 ~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h 142 (340)
T 1got_B 63 WGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGH 142 (340)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECC
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCC
Confidence 3457789999999999999998876 35689999999999999999999999999999999875 456778999
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCcccc
Q 004785 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETS 226 (730)
Q Consensus 149 ~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~ 226 (730)
.+.|.++.|++ ++ .+++++.|++|++||+.+++.+..+. |...|.+++|+|++++|++++.+ .|++||++++....
T Consensus 143 ~~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 143 TGYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp SSCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEE
Confidence 99999999998 54 48899999999999999999888765 88999999999999999999954 59999999887543
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCcc------c-----------CCCCeEEE
Q 004785 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYW------R-----------YPPPVICM 284 (730)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~------~-----------~p~~~V~l 284 (730)
.+..|...|.+++|+|+++++++++. +|+++.......+. ..++. . .....+.+
T Consensus 221 ---~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~v 296 (340)
T 1got_B 221 ---TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296 (340)
T ss_dssp ---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CTTCCSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ---EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-cCCcccceEEEEECCCCCEEEEECCCCeEEE
Confidence 67789999999999999998877664 77777554333222 11110 0 01245677
Q ss_pred ecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEE
Q 004785 285 AGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 285 ~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
|+.......... .+...++..++|++|+..|+..
T Consensus 297 wd~~~~~~~~~~---~~h~~~v~~~~~s~dg~~l~s~ 330 (340)
T 1got_B 297 WDALKADRAGVL---AGHDNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp EETTTCCEEEEE---ECCSSCEEEEEECTTSSCEEEE
T ss_pred EEcccCcEeeEe---ecCCCcEEEEEEcCCCCEEEEE
Confidence 776554433322 2345577788999999988864
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.93 E-value=1.6e-23 Score=228.87 Aligned_cols=195 Identities=24% Similarity=0.332 Sum_probs=172.0
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
++....+..|++++.|++|++||..+. .+.+|...|.+++|+|++++|++|+.|++|++||+.+++++..+.+|..
T Consensus 156 v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~ 235 (410)
T 1vyh_C 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235 (410)
T ss_dssp EEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc
Confidence 334457789999999999999999875 5789999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCC--------------------CCEEEEE
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHAS--------------------GELLAVA 209 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPd--------------------G~~LAsg 209 (730)
.|.++.|+| ++.++++++.|++|++||+.++++...+ .|...|.+++|+|+ |.+|++|
T Consensus 236 ~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg 314 (410)
T 1vyh_C 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314 (410)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE
T ss_pred cEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE
Confidence 999999999 9999999999999999999999888776 58889999999996 6789999
Q ss_pred ECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCC
Q 004785 210 SGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPG 273 (730)
Q Consensus 210 Sdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG 273 (730)
+.+ .|++||++++.... .+.+|...|++++|+|+|+++++++. +|++........+..+.+
T Consensus 315 s~D~~i~iwd~~~~~~~~---~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~ 381 (410)
T 1vyh_C 315 SRDKTIKMWDVSTGMCLM---TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH 381 (410)
T ss_dssp ETTSEEEEEETTTTEEEE---EEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS
T ss_pred eCCCeEEEEECCCCceEE---EEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC
Confidence 955 49999999887644 67789999999999999998888764 888887776666654443
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.93 E-value=8.5e-24 Score=220.99 Aligned_cols=192 Identities=17% Similarity=0.242 Sum_probs=163.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-eEEEEEecCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG-SCLKVLHGHR 149 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg-~~l~~l~gH~ 149 (730)
......+..|++++.|++|++||..++ .+.+|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|.
T Consensus 61 ~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~ 140 (304)
T 2ynn_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (304)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC
T ss_pred EEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC
Confidence 334557789999999999999999887 36799999999999999999999999999999999887 5567789999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCCeEEEEEcC--CCCEEEEEECC-eEEEEEcCCCcc
Q 004785 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHA--SGELLAVASGH-KLYIWRYNMREE 224 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l--~h~~~V~sVafSP--dG~~LAsgSdd-~I~VWDl~t~~~ 224 (730)
..|.+++|+|.++.+|++|+.|++|++||+++++....+ .+...+..+.|+| ++++|++++.+ .|+|||+++++.
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence 999999999977899999999999999999887665443 4667899999987 77899999955 599999998876
Q ss_pred ccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEe
Q 004785 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLA 269 (730)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~ 269 (730)
.. .+.+|...|.+++|+|++++|++++. +|++...+....+.
T Consensus 221 ~~---~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 221 VA---TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp EE---EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ce---eeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc
Confidence 44 67889999999999999997777664 78877666554444
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=7e-24 Score=224.52 Aligned_cols=191 Identities=18% Similarity=0.234 Sum_probs=168.3
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 76 a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
.....+..+++++.|++|++||+.++ .+..|...+.+++|+|++++|++++.|+.|++||+++++....+..|...
T Consensus 87 ~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~ 166 (321)
T 3ow8_A 87 DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKF 166 (321)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSC
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCce
Confidence 34456678999999999999999876 35678889999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCe
Q 004785 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPR 229 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~~~~ 229 (730)
|.+++|+| ++++|++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++++.++ |+|||++..+...
T Consensus 167 v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~--- 242 (321)
T 3ow8_A 167 ILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG--- 242 (321)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE---
T ss_pred EEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE---
Confidence 99999999 99999999999999999999999888775 888999999999999999999655 9999999877543
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEec
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLAT 270 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t 270 (730)
.+.+|...|.+++|+|++++|++++. +|++........+..
T Consensus 243 ~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 288 (321)
T 3ow8_A 243 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 288 (321)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC
Confidence 67789999999999999998887765 788876655555443
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.93 E-value=1.1e-23 Score=223.55 Aligned_cols=171 Identities=16% Similarity=0.244 Sum_probs=155.2
Q ss_pred CCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVa 156 (730)
...+++++.|++|++||+.++ .+.+|.+.|.+++|+|++++|++|+.|++|++||+++++++..+.+|...|.+++
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE
Confidence 345899999999999999876 4789999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC---CCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEEe
Q 004785 157 FHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY---RPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL 232 (730)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~---~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~~~~~l~ 232 (730)
|+| ++++|++++.|++|++||+++++.+..+.+. ..|.+++|+|+|++|++|++++ |++||+.+.+... .+.
T Consensus 234 ~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~---~~~ 309 (340)
T 1got_B 234 FFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG---VLA 309 (340)
T ss_dssp ECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE---EEE
T ss_pred EcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee---Eee
Confidence 999 9999999999999999999999888777654 4799999999999999999654 9999998877544 678
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe
Q 004785 233 RTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 233 ~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+|...|.+++|+|+|++|++++.
T Consensus 310 ~h~~~v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 310 GHDNRVSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp CCSSCEEEEEECTTSSCEEEEET
T ss_pred cCCCcEEEEEEcCCCCEEEEEcC
Confidence 89999999999999998877764
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=2.8e-23 Score=216.28 Aligned_cols=179 Identities=15% Similarity=0.142 Sum_probs=146.7
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCe--EEEEE
Q 004785 76 AGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGS--CLKVL 145 (730)
Q Consensus 76 a~~d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSP--DG~~LaSgS~DgtVrVWDl~tg~--~l~~l 145 (730)
+....+..|++++.|++|++||.... .+.+|.+.|++++|++ ++++|++|+.|++|+|||+++++ .+..+
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~ 95 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH 95 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe
Confidence 33457889999999999999998642 4789999999999987 48999999999999999999874 56778
Q ss_pred ecCCCCcEEEEEccCC-CCEEEEEeCCCcEEEEECCCCe---EEEEecCCCCeEEEEEcCC-------------CCEEEE
Q 004785 146 HGHRRTPWVVRFHPLN-PTIIASGSLDHEVRLWNASTAE---CIGSRDFYRPIASIAFHAS-------------GELLAV 208 (730)
Q Consensus 146 ~gH~~~V~sVafSP~d-g~lLaSgS~DgtVrLWDl~tg~---~i~~l~h~~~V~sVafSPd-------------G~~LAs 208 (730)
.+|...|.+++|+|+. +.+|++++.|++|++||++++. ......|...|.+++|+|+ +++|++
T Consensus 96 ~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s 175 (297)
T 2pm7_B 96 AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 175 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEE
T ss_pred ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEE
Confidence 8999999999999931 7899999999999999998763 2233468899999999997 579999
Q ss_pred EECC-eEEEEEcCCCcccc-CCeEEecCCCCeEEEEEccCC---CeEEEEE
Q 004785 209 ASGH-KLYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPHA---APLLLTA 254 (730)
Q Consensus 209 gSdd-~I~VWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPdG---~~Llatg 254 (730)
++.+ .|+|||++++.... ....+.+|...|++++|+|++ .++++++
T Consensus 176 gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 176 GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 9955 59999998765211 123567899999999999996 5455444
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=1.7e-23 Score=222.92 Aligned_cols=179 Identities=22% Similarity=0.255 Sum_probs=153.7
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC--eEEEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG--SCLKVL 145 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~~-------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg--~~l~~l 145 (730)
++...++..|++++.|++|++||...+. ..+|...|.+++|+|+|++|++|+.|++|+|||+.++ +++..+
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 3444578899999999999999987652 3689999999999999999999999999999999876 457889
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeE---EEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcC
Q 004785 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC---IGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYN 220 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~---i~~l-~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~ 220 (730)
.+|...|.+++|+| ++++|++++.|++|++||+.++.. +..+ .|...|.+++|+|++++|++++.+ .|++||++
T Consensus 102 ~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 102 EGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred cCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 99999999999999 999999999999999999987643 3333 488899999999999999999955 59999998
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 221 t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.++... ...+.+|...|++++|+|+|++|++++.
T Consensus 181 ~~~~~~-~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 181 EDDWVC-CATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp TTEEEE-EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEEE-EEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 765322 2356789999999999999998877665
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.93 E-value=3.8e-24 Score=229.92 Aligned_cols=178 Identities=15% Similarity=0.155 Sum_probs=152.5
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCeEEEEEe--
Q 004785 74 FEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVLH-- 146 (730)
Q Consensus 74 l~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~-~LaSgS~DgtVrVWDl~tg~~l~~l~-- 146 (730)
.++...++..|++++.|++|++||+.++ .+.+|...|++++|++++. +|++++.|++|++||+++++.+..+.
T Consensus 132 ~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 211 (344)
T 4gqb_B 132 TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS 211 (344)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC--
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc
Confidence 3444567889999999999999999887 4789999999999999874 78999999999999999999888774
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCC-CEEEEEECC-eEEEEEcCCCc
Q 004785 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASG-ELLAVASGH-KLYIWRYNMRE 223 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG-~~LAsgSdd-~I~VWDl~t~~ 223 (730)
.|...+.+++|+|++++++++|+.|++|+|||+++++++..+. |...|++++|+|+| ++|++++.+ .|+|||+++++
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 4566789999999778899999999999999999999887764 88999999999998 578999855 59999998876
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.. .+.+|...|++++|+|++++++++++
T Consensus 292 ~~----~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 292 LF----RSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp EE----EECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EE----EEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 43 46789999999999999998887765
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=1.1e-23 Score=226.26 Aligned_cols=172 Identities=15% Similarity=0.173 Sum_probs=144.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCc
Q 004785 81 RRGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP 152 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~--------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V 152 (730)
...+++++.|++|++||+.+++ +.+|...|++++|+|||++|++|+.|++|++||+++++.+..+++|...|
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 4567788999999999987652 34799999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec---CCCCeEEEEEcCCC-CEEEEEECC-eEEEEEcCCCccccC
Q 004785 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASG-ELLAVASGH-KLYIWRYNMREETSS 227 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~---h~~~V~sVafSPdG-~~LAsgSdd-~I~VWDl~t~~~~~~ 227 (730)
++++|+|++..++++++.|++|++||+++++.+..+. +...+.+++|+|++ ++|++|+.+ .|++||+++++...
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~- 263 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ- 263 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE-
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE-
Confidence 9999999555789999999999999999988766543 56789999999985 588888854 59999999887543
Q ss_pred CeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 228 PRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 228 ~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.+..|...|++++|+|++..++++++
T Consensus 264 --~~~~~~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 264 --TSAVHSQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp --EECCCSSCEEEEEECSSSSCCEEEEE
T ss_pred --EEeccceeEEEEEEcCCCCCEEEEEe
Confidence 67789999999999999865555543
No 18
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=5.1e-23 Score=221.19 Aligned_cols=242 Identities=18% Similarity=0.158 Sum_probs=182.9
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCc
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP 152 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V 152 (730)
....+..|++++.|+.|++||..++ .+.+|...|++++|+|++++|++++.|++|++||+.+++.+..+.+|...|
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v 184 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV 184 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE
T ss_pred EecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE
Confidence 3457789999999999999999876 367999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec----CCCCeE---------------------EEEEcCCCCEEE
Q 004785 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD----FYRPIA---------------------SIAFHASGELLA 207 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~----h~~~V~---------------------sVafSPdG~~LA 207 (730)
.+++|+| ++++|++++.|++|++||+++++.+..+. +...+. +++|+|+|++|+
T Consensus 185 ~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 263 (420)
T 3vl1_A 185 TDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI 263 (420)
T ss_dssp EEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE
T ss_pred EEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE
Confidence 9999999 89999999999999999999999888764 333444 455578999999
Q ss_pred EEECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCC-eEEEEEe-----eCCccCCCc-ceeEeccCCc-cc--
Q 004785 208 VASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA-PLLLTAE-----VNDLDSSES-SLTLATSPGY-WR-- 276 (730)
Q Consensus 208 sgSdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~-~Llatgs-----vwdl~s~~~-~~~l~t~sG~-~~-- 276 (730)
+++.+ .|++||+++++... .....|...|.+++|+|+++ ++++++. +|+++.... ...+..+.+. +.
T Consensus 264 ~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 264 AGHVSGVITVHNVFSKEQTI--QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV 341 (420)
T ss_dssp EEETTSCEEEEETTTCCEEE--EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE
T ss_pred EEcCCCeEEEEECCCCceeE--EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE
Confidence 99955 49999999887533 23345788999999999999 5665543 888887654 3333321111 00
Q ss_pred -----------CCCCeEEEecCCCCCCCCcc------cccCCCCCCceeeeEecCCC---EEEEE
Q 004785 277 -----------YPPPVICMAGAHSSSHPGLA------EEVPLITPPFLRPSFVRDDE---RISLQ 321 (730)
Q Consensus 277 -----------~p~~~V~l~d~~s~d~~~L~------~~~~~~slpil~p~FSpDg~---rI~~~ 321 (730)
.....+.+|+...+...... .........+...+|+||++ +|++.
T Consensus 342 ~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~ 406 (420)
T 3vl1_A 342 YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV 406 (420)
T ss_dssp EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE
T ss_pred EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEE
Confidence 01245667775553322111 11112233455788999998 66653
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.92 E-value=9.7e-24 Score=227.76 Aligned_cols=245 Identities=13% Similarity=0.166 Sum_probs=188.8
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe-------EEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-------CLK 143 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~-------~l~ 143 (730)
+.....+..|++++.|++|++||..++ .+..|...|.+++|+|+|++|++|+.|+.|++||+.+.. ...
T Consensus 72 ~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~ 151 (380)
T 3iz6_a 72 LDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSR 151 (380)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCcccee
Confidence 334457789999999999999999876 467899999999999999999999999999999987532 345
Q ss_pred EEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe------cCCCCeEEEEEcC-CCCEEEEEECC-eEE
Q 004785 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR------DFYRPIASIAFHA-SGELLAVASGH-KLY 215 (730)
Q Consensus 144 ~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l------~h~~~V~sVafSP-dG~~LAsgSdd-~I~ 215 (730)
.+.+|.+.|.++.|+|+++..+++++.|++|++||+.+++.+..+ .|...|.+++|++ ++++|++|+.+ .|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~ 231 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVR 231 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEE
Confidence 678999999999999966778999999999999999999988765 3778999999987 88999999955 599
Q ss_pred EEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCc----------------
Q 004785 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGY---------------- 274 (730)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~---------------- 274 (730)
+||++.... ....+.+|...|.+++|+|+|+++++++. +|+++.+.....+......
T Consensus 232 ~wd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 232 LWDLRITSR--AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp EEETTTTCC--CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred EEECCCCCc--ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC
Confidence 999985432 23467789999999999999998877664 8888766544433322111
Q ss_pred --c---cCCCCeEEEecCCCCCCCCcc-cccCCCCCCceeeeEecCCCEEEEE
Q 004785 275 --W---RYPPPVICMAGAHSSSHPGLA-EEVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 275 --~---~~p~~~V~l~d~~s~d~~~L~-~~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
. ......+.+|+...++..... ........++...+|+||++.|+..
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 0 012345677776554432222 1113345567789999999998863
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=6.7e-23 Score=219.66 Aligned_cols=241 Identities=12% Similarity=0.131 Sum_probs=188.4
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC------eEEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG------SCLKV 144 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg------~~l~~ 144 (730)
++....+..|++++.|++|++||..++ .+..|...|.+++|+|+|.+|++++.|+.+++|++... .....
T Consensus 70 ~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~ 149 (354)
T 2pbi_B 70 MDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKS 149 (354)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccccccccee
Confidence 444457789999999999999998765 35678889999999999999999999999999998653 34567
Q ss_pred EecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcC--CCCEEEEEEC-CeEEEEEcC
Q 004785 145 LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHA--SGELLAVASG-HKLYIWRYN 220 (730)
Q Consensus 145 l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSP--dG~~LAsgSd-d~I~VWDl~ 220 (730)
+.+|.+.|.+++|+| ++..+++++.|++|++||+.+++.+..+. |...|.+++|+| +|++|++++. +.|++||++
T Consensus 150 ~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 150 VAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred eeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 789999999999999 88999999999999999999999888764 888999999987 5789999995 559999999
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEecc-------------CCccc---CCC
Q 004785 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATS-------------PGYWR---YPP 279 (730)
Q Consensus 221 t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~-------------sG~~~---~p~ 279 (730)
+++... .+..|...|.+++|+|++.++++++. +|+++.......+... .|..- ...
T Consensus 229 ~~~~~~---~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 229 SGQCVQ---AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp TCCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CCcEEE---EecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC
Confidence 987544 67789999999999999998777664 7777654433222211 11100 112
Q ss_pred CeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEe
Q 004785 280 PVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (730)
Q Consensus 280 ~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~ 322 (730)
..+.+|+...+..... ..+...++..++|+||++.|+...
T Consensus 306 ~~i~vwd~~~~~~~~~---l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 306 YTINVWDVLKGSRVSI---LFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp SCEEEEETTTCSEEEE---ECCCSSCEEEEEECTTSSCEEEEE
T ss_pred CcEEEEECCCCceEEE---EECCCCcEEEEEECCCCCEEEEEc
Confidence 4577787655543322 234556777899999999988643
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=6.7e-23 Score=219.66 Aligned_cols=175 Identities=17% Similarity=0.245 Sum_probs=155.8
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSP--DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
....+..|++++.|++|++||+.++ .+.+|...|.+++|+| +|++|++|+.|++|++||+++++++..+.+|..
T Consensus 162 ~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 162 FTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 241 (354)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC
Confidence 3456678999999999999999887 3678999999999988 578999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC---CCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCcccc
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---YRPIASIAFHASGELLAVASGH-KLYIWRYNMREETS 226 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h---~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~ 226 (730)
.|.+++|+| ++++|++++.|++|++||+++++.+..+.. ...+.+++|+|+|++|++++.+ .|+|||+.+++...
T Consensus 242 ~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 242 DVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE
Confidence 999999999 899999999999999999999888776653 3478999999999999999955 59999998887543
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.+.+|...|.+++|+|||++|++++.
T Consensus 321 ---~l~~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 321 ---ILFGHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp ---EECCCSSCEEEEEECTTSSCEEEEET
T ss_pred ---EEECCCCcEEEEEECCCCCEEEEEcC
Confidence 67789999999999999998877664
No 22
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.92 E-value=3.6e-23 Score=227.01 Aligned_cols=190 Identities=17% Similarity=0.151 Sum_probs=155.1
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEEecC--C
Q 004785 79 DARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHGH--R 149 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH--~ 149 (730)
..+..|++|+.||+|++||+.++ .+.+|.+.|++|+|+| ++++|++++.|++|+|||++++........| .
T Consensus 130 ~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~ 209 (435)
T 4e54_B 130 THPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTIN 209 (435)
T ss_dssp SCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCS
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCC
Confidence 35678999999999999998765 3568999999999998 7899999999999999999876544433333 3
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCC-EEEEEEC-CeEEEEEcCCCccccC
Q 004785 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGE-LLAVASG-HKLYIWRYNMREETSS 227 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~-~LAsgSd-d~I~VWDl~t~~~~~~ 227 (730)
..+.+++|+| ++.+|++|+.|++|++||++.........|...|.+++|+|+++ +|++++. +.|+|||+++.+....
T Consensus 210 ~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~ 288 (435)
T 4e54_B 210 IWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS 288 (435)
T ss_dssp CCCCCEEEET-TTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC
T ss_pred ccEEEEEECC-CCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccce
Confidence 4578899999 99999999999999999997654433456899999999999987 7778885 4599999998776544
Q ss_pred CeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEe
Q 004785 228 PRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLA 269 (730)
Q Consensus 228 ~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~ 269 (730)
.....+|...|++++|+|+|++|++++. +|++..++....+.
T Consensus 289 ~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 289 FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence 4455679999999999999998888765 78887776655443
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.7e-22 Score=212.27 Aligned_cols=177 Identities=20% Similarity=0.264 Sum_probs=142.7
Q ss_pred EEEEEeCCCeEEEEeCCCCC------C-CC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-------CeEEEEEec
Q 004785 83 GLASWVEAESLHHLRPKYCP------L-SP-PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-------GSCLKVLHG 147 (730)
Q Consensus 83 ~L~Sgs~DgsIrlWd~~t~~------L-~g-H~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~t-------g~~l~~l~g 147 (730)
.|++++.|++|++||..++. + .+ |...|.+++|+|++++|++++.|++|+|||+.. .+.+..+.+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence 89999999999999998641 2 34 999999999999999999999999999999853 456788899
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCC----eEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCC
Q 004785 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA----ECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNM 221 (730)
Q Consensus 148 H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg----~~i~~l-~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t 221 (730)
|.+.|.+++|+| ++++|++++.|++|++||+... +++..+ .|...|.+++|+|++++|++++.+ .|++||...
T Consensus 106 h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 106 HENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp ---CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999 8999999999999999999532 445544 588999999999999999999955 599999876
Q ss_pred CccccCCeEEecCCCCeEEEEEccC--CCeEEEEEe-----eCCccC
Q 004785 222 REETSSPRIVLRTRRSLRAVHFHPH--AAPLLLTAE-----VNDLDS 261 (730)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPd--G~~Llatgs-----vwdl~s 261 (730)
+... ....+.+|...|.+++|+|+ +.++++++. +|++..
T Consensus 185 ~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 185 DDWE-CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp TEEE-EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCee-EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 6321 13367789999999999999 555665543 676653
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.91 E-value=2.5e-22 Score=217.71 Aligned_cols=185 Identities=21% Similarity=0.297 Sum_probs=154.3
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC----CCCCC------------------CCeEEEEECCCCCEEEEEeCCCeEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYCP----LSPPP------------------RSTIAAAFSPDGKTLASTHGDHTVK 132 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~~----L~gH~------------------~~Vt~lafSPDG~~LaSgS~DgtVr 132 (730)
++...++..|++++ ++++++|+..++. +..|. ..|.+++|+|||++|++|+.|++|+
T Consensus 70 v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~ 148 (393)
T 1erj_A 70 VKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIR 148 (393)
T ss_dssp EEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEE
Confidence 33445777888876 7899999988763 33332 2499999999999999999999999
Q ss_pred EEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcC-CCCEEEEEEC
Q 004785 133 IIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SGELLAVASG 211 (730)
Q Consensus 133 VWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSP-dG~~LAsgSd 211 (730)
|||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||++++++...+.+...+.+++|+| +|++|++++.
T Consensus 149 iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 149 IWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred EEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC
Confidence 999999999999999999999999999 89999999999999999999999988888889999999999 8999999995
Q ss_pred C-eEEEEEcCCCccccCC----eEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccC
Q 004785 212 H-KLYIWRYNMREETSSP----RIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (730)
Q Consensus 212 d-~I~VWDl~t~~~~~~~----~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s 261 (730)
+ .|++||++++...... ....+|...|.+++|+|+|+++++++. +|++..
T Consensus 228 d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 5 4999999887653311 112568899999999999998877654 777764
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=1e-22 Score=233.99 Aligned_cols=254 Identities=14% Similarity=0.138 Sum_probs=190.0
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEECCCCeEE
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCL 142 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPDG~~LaSgS~D----gtVrVWDl~tg~~l 142 (730)
..++...++..|++++.|++|++||..++ .+.+|.+.|.+++|+|||++|++++.+ +.|++|| +++.+
T Consensus 63 ~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~ 140 (611)
T 1nr0_A 63 TVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSN 140 (611)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBC
T ss_pred EEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCc
Confidence 34455668899999999999999998643 356899999999999999999999875 4788887 56677
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcC
Q 004785 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYN 220 (730)
Q Consensus 143 ~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~ 220 (730)
..+.+|.+.|++++|+|++..+|++++.|++|++||..+++++..+. |...|.+++|+|||++|++++.+ .|+|||+.
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 78899999999999999444579999999999999999988877764 88999999999999999999955 49999998
Q ss_pred CCccccCCeEE-------ecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCcccC-----------
Q 004785 221 MREETSSPRIV-------LRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRY----------- 277 (730)
Q Consensus 221 t~~~~~~~~~l-------~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~~----------- 277 (730)
+++... .+ .+|...|.+++|+|+|++|++++. +|++..++....+.....+...
T Consensus 221 ~g~~~~---~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (611)
T 1nr0_A 221 DGTKTG---VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQAL 297 (611)
T ss_dssp TCCEEE---ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCE
T ss_pred CCcEee---eeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEE
Confidence 876543 22 169999999999999998877654 8888766655444322111100
Q ss_pred ----CCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCC
Q 004785 278 ----PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRS 338 (730)
Q Consensus 278 ----p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~s 338 (730)
....+.+|+...+. ......+...++..++|+||++.|+....+. .+..+++.+
T Consensus 298 ~s~s~d~~i~~~~~~~~~---~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~----~v~~Wd~~~ 355 (611)
T 1nr0_A 298 VSISANGFINFVNPELGS---IDQVRYGHNKAITALSSSADGKTLFSADAEG----HINSWDIST 355 (611)
T ss_dssp EEEETTCCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEETTS----CEEEEETTT
T ss_pred EEEeCCCcEEEEeCCCCC---cceEEcCCCCCEEEEEEeCCCCEEEEEeCCC----cEEEEECCC
Confidence 11234555543332 1122234555677899999999998744332 334455443
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=5.5e-22 Score=204.63 Aligned_cols=218 Identities=18% Similarity=0.166 Sum_probs=179.3
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEec
Q 004785 74 FEAGRDARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (730)
Q Consensus 74 l~a~~d~g~~L~Sgs~DgsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g 147 (730)
..+...++..|++++.|+.|++||...+. +..|...|.+++|+|++++|++++.|+.|++||+++++.+..+++
T Consensus 102 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 102 SCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp EEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec
Confidence 34445577889999999999999998753 568999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCcccc
Q 004785 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETS 226 (730)
Q Consensus 148 H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t~~~~~ 226 (730)
|...|.+++|+| +++++++++.|+.|++||+++++.+..+.+...+.+++|+|++++|++++. +.|++||+++.+.
T Consensus 182 ~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-- 258 (337)
T 1gxr_A 182 HTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-- 258 (337)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE--
T ss_pred ccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe--
Confidence 999999999999 899999999999999999999999999999999999999999999999995 4599999988764
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCc
Q 004785 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPF 306 (730)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpi 306 (730)
.....|...|.+++|+|+++++++++.. ..+.+|+.......... ....++
T Consensus 259 --~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------------------g~i~~~~~~~~~~~~~~----~~~~~v 309 (337)
T 1gxr_A 259 --YQLHLHESCVLSLKFAYCGKWFVSTGKD-----------------------NLLNAWRTPYGASIFQS----KESSSV 309 (337)
T ss_dssp --EEECCCSSCEEEEEECTTSSEEEEEETT-----------------------SEEEEEETTTCCEEEEE----ECSSCE
T ss_pred --EEEcCCccceeEEEECCCCCEEEEecCC-----------------------CcEEEEECCCCeEEEEe----cCCCcE
Confidence 2467889999999999999987766531 12333333332221111 113356
Q ss_pred eeeeEecCCCEEEEEec
Q 004785 307 LRPSFVRDDERISLQHT 323 (730)
Q Consensus 307 l~p~FSpDg~rI~~~~~ 323 (730)
..+.|++|++.++....
T Consensus 310 ~~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 310 LSCDISVDDKYIVTGSG 326 (337)
T ss_dssp EEEEECTTSCEEEEEET
T ss_pred EEEEECCCCCEEEEecC
Confidence 67899999999887443
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.91 E-value=2.3e-22 Score=217.89 Aligned_cols=193 Identities=22% Similarity=0.266 Sum_probs=158.9
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
++...++..|++++.|++|++||..++ .+.+|...|.+++|+|++++|++++.|++|++||++++++...+. +..
T Consensus 129 v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~ 207 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IED 207 (393)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCC
Confidence 334557889999999999999999876 478999999999999999999999999999999999999888876 556
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe--------cCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCC
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--------DFYRPIASIAFHASGELLAVASG-HKLYIWRYNM 221 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l--------~h~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t 221 (730)
.+.+++|+|.+++++++++.|++|++||+++++.+..+ .|...|.+++|+|+|++|++++. +.|++||++.
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 79999999978899999999999999999999877664 47789999999999999999995 4599999976
Q ss_pred Ccccc---------CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeE
Q 004785 222 REETS---------SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (730)
Q Consensus 222 ~~~~~---------~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l 268 (730)
..... ....+.+|...|.+++|+|+++++++++. +|++..+.....+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE
Confidence 53211 12346679999999999999998877664 6666655544333
No 28
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=9.2e-22 Score=209.89 Aligned_cols=240 Identities=13% Similarity=0.088 Sum_probs=182.5
Q ss_pred ecCC-CEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEEecC-
Q 004785 78 RDAR-RGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHGH- 148 (730)
Q Consensus 78 ~d~g-~~L~Sgs~DgsIrlWd~~t~~------L~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH- 148 (730)
...+ ..|++++.|+.|++||..++. +.+|...|.+++|+| ++++|++++.|+.|++||+.+ +.+..+..|
T Consensus 82 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~ 160 (383)
T 3ei3_B 82 HPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTD 160 (383)
T ss_dssp CSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCC
T ss_pred CCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccC
Confidence 3444 799999999999999998652 347999999999999 789999999999999999986 556666544
Q ss_pred --CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCCeEEEEEcCCCC-EEEEEECC-eEEEEEcCCCc
Q 004785 149 --RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAFHASGE-LLAVASGH-KLYIWRYNMRE 223 (730)
Q Consensus 149 --~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~-l~h~~~V~sVafSPdG~-~LAsgSdd-~I~VWDl~t~~ 223 (730)
...|.+++|+| +++++++++.|+.|++||++ ++.+.. ..|...|.+++|+|+++ +|++++.+ .|++||+++.+
T Consensus 161 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 161 SWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIK 238 (383)
T ss_dssp CSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCC
T ss_pred CCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCC
Confidence 47899999999 99999999999999999995 555555 45899999999999999 89999855 59999999854
Q ss_pred cccCCeEEecCCCCeEEEEEcc-CCCeEEEEEe-----eCCccCCCcceeEeccCCcc--------------------cC
Q 004785 224 ETSSPRIVLRTRRSLRAVHFHP-HAAPLLLTAE-----VNDLDSSESSLTLATSPGYW--------------------RY 277 (730)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSP-dG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~--------------------~~ 277 (730)
..........|...|.+++|+| +++++++++. +|++..+.....+..+.... .+
T Consensus 239 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 239 DKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp STTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred cccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 3222334457999999999999 9998887764 88888777655554322110 00
Q ss_pred ---------CCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEE
Q 004785 278 ---------PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 278 ---------p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
....+.+|+..++.......... ....+..++|++|++.|+..
T Consensus 319 s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~-~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 319 YPDDQLLLNDKRTIDIYDANSGGLVHQLRDPN-AAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp BCCTTTCTTCCCCEEEEETTTCCEEEEECBTT-BCSCCCEEEECTTSSEEEEE
T ss_pred cCCcccccCCCCeEEEEecCCCceeeeecCCC-CCceEEEEEEecCccEEEEe
Confidence 13568888877665543332211 11122356999999998875
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=5.2e-22 Score=228.20 Aligned_cols=189 Identities=16% Similarity=0.230 Sum_probs=159.5
Q ss_pred EEEecCCCEEEEEeCC----CeEEEEeCCCC--CCCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCeEEEEEec
Q 004785 75 EAGRDARRGLASWVEA----ESLHHLRPKYC--PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVLHG 147 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~D----gsIrlWd~~t~--~L~gH~~~Vt~lafSPDG~-~LaSgS~DgtVrVWDl~tg~~l~~l~g 147 (730)
++...++..|++++.+ +.|++||.... .+.+|...|++++|+|++. +|++++.|++|++||..+++++..+.+
T Consensus 109 v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~ 188 (611)
T 1nr0_A 109 ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE 188 (611)
T ss_dssp EEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC
T ss_pred EEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc
Confidence 3344567788887765 47999986433 6889999999999999987 599999999999999999999999999
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe--------cCCCCeEEEEEcCCCCEEEEEECC-eEEEEE
Q 004785 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--------DFYRPIASIAFHASGELLAVASGH-KLYIWR 218 (730)
Q Consensus 148 H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l--------~h~~~V~sVafSPdG~~LAsgSdd-~I~VWD 218 (730)
|.+.|++++|+| ++++|++++.|++|++||+.+++.+..+ .|.+.|.+++|+|+|++|++++.+ .|+|||
T Consensus 189 H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 189 HTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999999999 9999999999999999999999988776 588999999999999999999955 599999
Q ss_pred cCCCccccC----------------------------------------CeEEecCCCCeEEEEEccCCCeEEEEEe---
Q 004785 219 YNMREETSS----------------------------------------PRIVLRTRRSLRAVHFHPHAAPLLLTAE--- 255 (730)
Q Consensus 219 l~t~~~~~~----------------------------------------~~~l~~h~~~V~sVaFSPdG~~Llatgs--- 255 (730)
+.+++.... ...+.+|...|++++|+|||++|++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~ 347 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGH 347 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc
Confidence 987653210 1133578899999999999998887764
Q ss_pred --eCCccCCCc
Q 004785 256 --VNDLDSSES 264 (730)
Q Consensus 256 --vwdl~s~~~ 264 (730)
+|++..+..
T Consensus 348 v~~Wd~~~~~~ 358 (611)
T 1nr0_A 348 INSWDISTGIS 358 (611)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCce
Confidence 777765543
No 30
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=1.4e-22 Score=235.63 Aligned_cols=182 Identities=17% Similarity=0.186 Sum_probs=157.6
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC
Q 004785 79 DARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~---------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (730)
++...|++++.|++|++|++... .+.+|...|.+++|+|++++|++|+.|++|+|||+.+++.+..+.+|.
T Consensus 393 ~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~ 472 (694)
T 3dm0_A 393 DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT 472 (694)
T ss_dssp TCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC
Confidence 45678999999999999998653 367899999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe----cCCCCeEEEEEcCCC--CEEEEEEC-CeEEEEEcCCC
Q 004785 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR----DFYRPIASIAFHASG--ELLAVASG-HKLYIWRYNMR 222 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l----~h~~~V~sVafSPdG--~~LAsgSd-d~I~VWDl~t~ 222 (730)
..|.+++|+| ++++|++++.|++|++||+......... .|...|.+++|+|++ ..|++++. +.|+|||+++.
T Consensus 473 ~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 473 KDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC
Confidence 9999999999 8999999999999999998765444332 477889999999987 58888885 45999999887
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCc
Q 004785 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSES 264 (730)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~ 264 (730)
+... .+.+|...|++++|+|+|+++++++. +|++..+..
T Consensus 552 ~~~~---~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 552 KLRS---TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp CEEE---EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred cEEE---EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 6543 67789999999999999998777664 787775544
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.91 E-value=2.8e-22 Score=211.23 Aligned_cols=175 Identities=18% Similarity=0.225 Sum_probs=151.6
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
.+...++..|++++.|++|++||+.++ .+.+|...|.+++|+|++++|++|+.|++|++||++ ++++..+.+|..
T Consensus 71 ~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~ 149 (319)
T 3frx_A 71 CTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND 149 (319)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCC
Confidence 344567889999999999999999887 477999999999999999999999999999999986 567888999999
Q ss_pred CcEEEEEccC-----CCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCc
Q 004785 151 TPWVVRFHPL-----NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMRE 223 (730)
Q Consensus 151 ~V~sVafSP~-----dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~ 223 (730)
.|.+++|+|. ++.++++++.|++|++||+++++....+ .|...|.+++|+|+|++|++++.+ .|+|||+.+++
T Consensus 150 ~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 150 WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp CEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999983 2348999999999999999998887765 589999999999999999999955 59999999887
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
... ...+...|.+++|+|++.+++++.
T Consensus 230 ~~~----~~~~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 230 AMY----TLSAQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEE----EEECCSCEEEEEECSSSSEEEEEE
T ss_pred EEE----EecCCCcEEEEEEcCCCCEEEEEc
Confidence 543 334557899999999999776654
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=9.4e-22 Score=206.31 Aligned_cols=225 Identities=15% Similarity=0.129 Sum_probs=172.3
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCe--EEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKV 144 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~ 144 (730)
++....+..|++++.|+.|++||.... .+.+|...|++++|+++ +++|++++.|+.|++||+.+++ .+..
T Consensus 17 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee
Confidence 334457789999999999999998732 47799999999999987 9999999999999999999987 7788
Q ss_pred EecCCCCcEEEEEccCC--CCEEEEEeCCCcEEEEECCCCeE---EEEecCCCCeEEEEEcC-------------CCCEE
Q 004785 145 LHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC---IGSRDFYRPIASIAFHA-------------SGELL 206 (730)
Q Consensus 145 l~gH~~~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~tg~~---i~~l~h~~~V~sVafSP-------------dG~~L 206 (730)
+.+|...|.+++|+| + +.++++++.|+.|++||+.++.. .....|...|.+++|+| ++++|
T Consensus 97 ~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 97 HAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp ECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred ecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 889999999999999 6 89999999999999999998733 33346889999999999 69999
Q ss_pred EEEECC-eEEEEEcCCCcccc-CCeEEecCCCCeEEEEEccC---CCeEEEEEeeCCccCCCcceeEeccCCcccCCCCe
Q 004785 207 AVASGH-KLYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPH---AAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPV 281 (730)
Q Consensus 207 AsgSdd-~I~VWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPd---G~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~ 281 (730)
++++.+ .|++||++...... ....+..|...|.+++|+|+ ++++++++... .
T Consensus 176 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----------------------~ 232 (379)
T 3jrp_A 176 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----------------------T 232 (379)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----------------------C
T ss_pred EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC-----------------------E
Confidence 999954 59999998765422 12355678999999999999 77666655311 2
Q ss_pred EEEecCCCCCCCCcc--cccCCCCCCceeeeEecCCCEEEEEec
Q 004785 282 ICMAGAHSSSHPGLA--EEVPLITPPFLRPSFVRDDERISLQHT 323 (730)
Q Consensus 282 V~l~d~~s~d~~~L~--~~~~~~slpil~p~FSpDg~rI~~~~~ 323 (730)
+.+|+.......... ........++..++|+||++.|++...
T Consensus 233 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 233 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 276 (379)
T ss_dssp EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES
T ss_pred EEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC
Confidence 233332222111100 011112345668899999999887544
No 33
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.90 E-value=4.2e-23 Score=219.00 Aligned_cols=176 Identities=16% Similarity=0.203 Sum_probs=140.4
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe---EEEEEecCC
Q 004785 79 DARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS---CLKVLHGHR 149 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~---~l~~l~gH~ 149 (730)
.++..|++++.|+.|++||..++ .+.+|...|++++|+|++++|++++.|++|++||+.+++ ....+.+|.
T Consensus 21 ~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~ 100 (377)
T 3dwl_C 21 SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN 100 (377)
T ss_dssp SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS
T ss_pred CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC
Confidence 46778999999999999998764 477999999999999999999999999999999999887 677788999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeE---EEEe-c-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCc
Q 004785 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC---IGSR-D-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMRE 223 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~---i~~l-~-h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~ 223 (730)
..|.+++|+| ++++|++++.|++|++||+++++. ...+ . |...|.+++|+|++++|++++.+ .|++||++..+
T Consensus 101 ~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 101 RAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp SCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred CceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 9999999999 999999999999999999998863 4444 3 88999999999999999999955 59999996432
Q ss_pred cc--------------cCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 224 ET--------------SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 224 ~~--------------~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.. ........|...|.+++|+|+|+++++++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 180 VDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp CC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET
T ss_pred cCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC
Confidence 10 001111278899999999999998887764
No 34
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.90 E-value=9.7e-22 Score=209.30 Aligned_cols=180 Identities=21% Similarity=0.301 Sum_probs=149.8
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC---eEEEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG---SCLKVL 145 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg---~~l~~l 145 (730)
++....+..|++++.|++|++|+.... .+.+|...|.+++|+|++++|++++.|++|++||+.++ +++..+
T Consensus 67 ~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 344457889999999999999998754 47799999999999999999999999999999999876 346778
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE--EEe-cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCC
Q 004785 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI--GSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRYNM 221 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i--~~l-~h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t 221 (730)
.+|...|.+++|+| ++++|++++.|++|++||+.+++.. ..+ .|...|.+++|+|+|++|++++.++ |+|||...
T Consensus 147 ~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 147 NSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp CCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred cCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 89999999999999 8999999999999999999887643 333 5889999999999999999999655 99999754
Q ss_pred CccccC------------CeEEec-CCCCeEEEEEccCCCeEEEEEe
Q 004785 222 REETSS------------PRIVLR-TRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 222 ~~~~~~------------~~~l~~-h~~~V~sVaFSPdG~~Llatgs 255 (730)
...... ...+.+ |...|++++|+|++..+++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~ 272 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG 272 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEET
T ss_pred CCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeC
Confidence 322110 011222 7889999999999998887764
No 35
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.90 E-value=9.6e-23 Score=214.45 Aligned_cols=177 Identities=16% Similarity=0.141 Sum_probs=144.3
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCC--eEEEEEec
Q 004785 78 RDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTG--SCLKVLHG 147 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSP--DG~~LaSgS~DgtVrVWDl~tg--~~l~~l~g 147 (730)
...+..|++++.|++|++||+.++ .+.+|.+.|.+++|++ ++++|++|+.|++|++||++++ +.+..+.+
T Consensus 22 s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~ 101 (316)
T 3bg1_A 22 DYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAG 101 (316)
T ss_dssp CGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECC
T ss_pred cCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccC
Confidence 346789999999999999998764 3679999999999986 4899999999999999999987 46677889
Q ss_pred CCCCcEEEEEccCC-CCEEEEEeCCCcEEEEECCCCeEE---EE-ecCCCCeEEEEEcCC-----------------CCE
Q 004785 148 HRRTPWVVRFHPLN-PTIIASGSLDHEVRLWNASTAECI---GS-RDFYRPIASIAFHAS-----------------GEL 205 (730)
Q Consensus 148 H~~~V~sVafSP~d-g~lLaSgS~DgtVrLWDl~tg~~i---~~-l~h~~~V~sVafSPd-----------------G~~ 205 (730)
|...|.+++|+|++ +.+|++++.|++|++||++++... .. ..|...|.+++|+|+ +++
T Consensus 102 h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (316)
T 3bg1_A 102 HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKR 181 (316)
T ss_dssp CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCB
T ss_pred CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccce
Confidence 99999999999932 789999999999999999876322 22 247788999999998 478
Q ss_pred EEEEECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCC----CeEEEEE
Q 004785 206 LAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHA----APLLLTA 254 (730)
Q Consensus 206 LAsgSdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG----~~Llatg 254 (730)
|++++.+ .|+|||++..........+.+|...|++++|+|++ ++|++++
T Consensus 182 l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 182 FASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp EECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred EEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 9999854 59999997553211123466899999999999997 5555544
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=1e-21 Score=220.24 Aligned_cols=214 Identities=25% Similarity=0.358 Sum_probs=170.2
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~---~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
.+...++..|+++..|+.|++|+.... .+.+|...|.+++|+|||++|++++.|+.|++||. +++.+..+.+|...
T Consensus 350 ~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~ 428 (577)
T 2ymu_A 350 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 428 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSC
T ss_pred EEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCC
Confidence 444567889999999999999997544 46789999999999999999999999999999995 67888999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeE
Q 004785 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRI 230 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~~~~~ 230 (730)
|++++|+| +++++++++.|++|++||...........|...|.+++|+|||++|+++++++ |+|||.. ++.. ..
T Consensus 429 v~~~~~s~-d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~---~~ 503 (577)
T 2ymu_A 429 VWGVAFSP-DDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLL---QT 503 (577)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEE---EE
T ss_pred eEEEEECC-CCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEE---EE
Confidence 99999999 99999999999999999975443334456899999999999999999999655 9999964 4432 36
Q ss_pred EecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeee
Q 004785 231 VLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPS 310 (730)
Q Consensus 231 l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~ 310 (730)
+.+|...|++++|+|||++|++++... .+.+|+. .++. .....+...+++.++
T Consensus 504 ~~~h~~~v~~l~~s~dg~~l~s~~~dg-----------------------~v~lwd~-~~~~---~~~~~~h~~~v~~~~ 556 (577)
T 2ymu_A 504 LTGHSSSVRGVAFSPDGQTIASASDDK-----------------------TVKLWNR-NGQL---LQTLTGHSSSVWGVA 556 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTS-----------------------EEEEECT-TSCE---EEEEECCSSCEEEEE
T ss_pred EeCCCCCEEEEEEcCCCCEEEEEECcC-----------------------EEEEEeC-CCCE---EEEEcCCCCCEEEEE
Confidence 778999999999999999888765411 2333331 1111 111112344667889
Q ss_pred EecCCCEEEEE
Q 004785 311 FVRDDERISLQ 321 (730)
Q Consensus 311 FSpDg~rI~~~ 321 (730)
|+||++.|+..
T Consensus 557 fs~dg~~l~s~ 567 (577)
T 2ymu_A 557 FSPDGQTIASA 567 (577)
T ss_dssp ECTTSSCEEEE
T ss_pred EcCCCCEEEEE
Confidence 99999998863
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.5e-21 Score=203.52 Aligned_cols=240 Identities=10% Similarity=0.043 Sum_probs=183.1
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 76 a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
+....+..|++++.|+.|++||..++ .+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+. |...
T Consensus 39 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~ 117 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVP 117 (369)
T ss_dssp EECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSC
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCC
Confidence 33457789999999999999998876 477899999999999999999999999999999999999998888 8889
Q ss_pred cEEEEEccCCCCEEEEEeCC-----CcEEEEECCCCeE------------EEEecCCC--CeEEEEEcCCCCEEEEEECC
Q 004785 152 PWVVRFHPLNPTIIASGSLD-----HEVRLWNASTAEC------------IGSRDFYR--PIASIAFHASGELLAVASGH 212 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~D-----gtVrLWDl~tg~~------------i~~l~h~~--~V~sVafSPdG~~LAsgSdd 212 (730)
|.+++|+| +++++++++.+ +.|++||+.++.. .....+.. .+.+++|+|++++|++++.+
T Consensus 118 v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 196 (369)
T 3zwl_B 118 VKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD 196 (369)
T ss_dssp EEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT
T ss_pred eEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC
Confidence 99999999 99999999998 9999999986532 11123444 89999999999999999854
Q ss_pred -eEEEEEcCCC-ccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc--C-C----
Q 004785 213 -KLYIWRYNMR-EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR--Y-P---- 278 (730)
Q Consensus 213 -~I~VWDl~t~-~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~--~-p---- 278 (730)
.|++||+++. ... ..+..|...|.+++|+|+++++++++. +|++........+........ + +
T Consensus 197 g~i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (369)
T 3zwl_B 197 GKISKYDVSNNYEYV---DSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEF 273 (369)
T ss_dssp SEEEEEETTTTTEEE---EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSE
T ss_pred CEEEEEECCCCcEeE---EEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCce
Confidence 5999999884 432 366778999999999999998887654 788876665544431111000 0 0
Q ss_pred --------------------CCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEec
Q 004785 279 --------------------PPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (730)
Q Consensus 279 --------------------~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~ 323 (730)
...+.+|+.......... .....++..+.|+||++.++....
T Consensus 274 l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 274 IILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV---QGHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp EEEEECCC-------------CEEEEEETTTCCEEEEE---ECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe---ecccCcEEEEEECCCCCEEEEEcC
Confidence 003555554444333222 223446668999999998887433
No 38
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=4.7e-22 Score=204.06 Aligned_cols=192 Identities=16% Similarity=0.151 Sum_probs=155.2
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC--------CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCC-------
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYC--------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTG------- 139 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~--------~L~gH~~~Vt~lafSP--DG~~LaSgS~DgtVrVWDl~tg------- 139 (730)
....+..|++++.|+.|++||..++ .+.+|...|++++|+| |+++|++++.|+.|++||+.++
T Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 98 (351)
T 3f3f_A 19 YDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGR 98 (351)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSC
T ss_pred EcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccccc
Confidence 3457789999999999999998764 2468999999999999 6999999999999999999887
Q ss_pred --eEEEEEecCCCCcEEEEEccCC--CCEEEEEeCCCcEEEEECCCCeE-------------------------------
Q 004785 140 --SCLKVLHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC------------------------------- 184 (730)
Q Consensus 140 --~~l~~l~gH~~~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~tg~~------------------------------- 184 (730)
+.+..+.+|...|.+++|+| + ++++++++.|+.|++||+++++.
T Consensus 99 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 177 (351)
T 3f3f_A 99 RWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCP 177 (351)
T ss_dssp SEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECC
T ss_pred CcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEecc
Confidence 66888899999999999999 7 89999999999999999876531
Q ss_pred -----------------------------EEEe-cCCCCeEEEEEcCCC----CEEEEEECC-eEEEEEcCCCcc-----
Q 004785 185 -----------------------------IGSR-DFYRPIASIAFHASG----ELLAVASGH-KLYIWRYNMREE----- 224 (730)
Q Consensus 185 -----------------------------i~~l-~h~~~V~sVafSPdG----~~LAsgSdd-~I~VWDl~t~~~----- 224 (730)
+..+ .|...|.+++|+|++ ++|++++.+ .|++||++....
T Consensus 178 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 257 (351)
T 3f3f_A 178 SRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASE 257 (351)
T ss_dssp CSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------
T ss_pred CCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccC
Confidence 1112 377899999999998 899999955 499999986421
Q ss_pred --------------------------------------ccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccC
Q 004785 225 --------------------------------------TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (730)
Q Consensus 225 --------------------------------------~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s 261 (730)
......+..|...|++++|+|++++|++++. +|++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 258 ESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ---------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 0112345678899999999999998887764 666665
Q ss_pred CCcceeEe
Q 004785 262 SESSLTLA 269 (730)
Q Consensus 262 ~~~~~~l~ 269 (730)
......+.
T Consensus 338 ~~~~~~~~ 345 (351)
T 3f3f_A 338 SNEFKCMS 345 (351)
T ss_dssp TSCEEEEE
T ss_pred Ccchhhee
Confidence 54444443
No 39
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=1.9e-21 Score=210.31 Aligned_cols=192 Identities=11% Similarity=0.140 Sum_probs=152.2
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC---------------CCCCCC------------CCeEEEEECCCC--CEEEEEeC
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYC---------------PLSPPP------------RSTIAAAFSPDG--KTLASTHG 127 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~---------------~L~gH~------------~~Vt~lafSPDG--~~LaSgS~ 127 (730)
....+..|++++.|+.|++|+..++ .+.+|. ..|++++|+|++ .+|++++.
T Consensus 36 ~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~ 115 (447)
T 3dw8_B 36 FNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTN 115 (447)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCC
Confidence 3457789999999999999998753 356888 889999999998 79999999
Q ss_pred CCeEEEEECCCCeEE---------------------------------------EE-EecCCCCcEEEEEccCCCCEEEE
Q 004785 128 DHTVKIIDCQTGSCL---------------------------------------KV-LHGHRRTPWVVRFHPLNPTIIAS 167 (730)
Q Consensus 128 DgtVrVWDl~tg~~l---------------------------------------~~-l~gH~~~V~sVafSP~dg~lLaS 167 (730)
|++|++||+.+++.. +. +.+|...|.+++|+| ++++|++
T Consensus 116 d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s 194 (447)
T 3dw8_B 116 DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS-DYETYLS 194 (447)
T ss_dssp SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT-TSSEEEE
T ss_pred CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC-CCCEEEE
Confidence 999999999765432 12 368999999999999 8999999
Q ss_pred EeCCCcEEEEECCC-CeEEEEe--------cCCCCeEEEEEcCCC-CEEEEEECCe-EEEEEcCCCcccc-CCeEEecCC
Q 004785 168 GSLDHEVRLWNAST-AECIGSR--------DFYRPIASIAFHASG-ELLAVASGHK-LYIWRYNMREETS-SPRIVLRTR 235 (730)
Q Consensus 168 gS~DgtVrLWDl~t-g~~i~~l--------~h~~~V~sVafSPdG-~~LAsgSdd~-I~VWDl~t~~~~~-~~~~l~~h~ 235 (730)
+ .|++|++||+.+ ++.+..+ .|...|.+++|+|++ ++|++++.++ |++||+++++... ....+..|.
T Consensus 195 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 273 (447)
T 3dw8_B 195 A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPE 273 (447)
T ss_dssp E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-
T ss_pred e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCC
Confidence 8 799999999994 4444432 588899999999999 8999999554 9999999877421 123555665
Q ss_pred C------------CeEEEEEccCCCeEEEEEe----eCCccC-CCcceeEec
Q 004785 236 R------------SLRAVHFHPHAAPLLLTAE----VNDLDS-SESSLTLAT 270 (730)
Q Consensus 236 ~------------~V~sVaFSPdG~~Llatgs----vwdl~s-~~~~~~l~t 270 (730)
. .|.+++|+|+|++|++++. +|++.. ......+..
T Consensus 274 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~ 325 (447)
T 3dw8_B 274 DPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQV 325 (447)
T ss_dssp ----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEES
T ss_pred CccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeec
Confidence 4 8999999999998887654 888875 544444443
No 40
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.90 E-value=2.7e-22 Score=216.38 Aligned_cols=175 Identities=18% Similarity=0.234 Sum_probs=149.2
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC---------CCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECC-CCeEEEEEecC
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP---------LSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQ-TGSCLKVLHGH 148 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~---------L~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~-tg~~l~~l~gH 148 (730)
.+..|++++.|++|++||+.++. ..+|...|.++.|++ ++++|++|+.|++|++||++ .++.+..+.+|
T Consensus 169 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h 248 (380)
T 3iz6_a 169 QETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH 248 (380)
T ss_dssp SSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred CCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence 35679999999999999998763 268999999999987 89999999999999999998 45778899999
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC--------CCeEEEEEcCCCCEEEEEECC-eEEEEEc
Q 004785 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY--------RPIASIAFHASGELLAVASGH-KLYIWRY 219 (730)
Q Consensus 149 ~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~--------~~V~sVafSPdG~~LAsgSdd-~I~VWDl 219 (730)
.+.|++++|+| ++++|++++.|++|++||+++++.+..+... ..|.+++|+|+|++|++|+.+ .|++||+
T Consensus 249 ~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~ 327 (380)
T 3iz6_a 249 EGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT 327 (380)
T ss_dssp SSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred CCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 99999999999 9999999999999999999999988776421 248999999999999999855 4999999
Q ss_pred CCCccccCC-eEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 220 NMREETSSP-RIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 220 ~t~~~~~~~-~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
..++..... .....|...|.+++|+|||++|++++.
T Consensus 328 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 328 LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 887654311 112568999999999999997776653
No 41
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.89 E-value=2.1e-22 Score=216.21 Aligned_cols=178 Identities=15% Similarity=0.105 Sum_probs=151.9
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCeEEEEE--e
Q 004785 74 FEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVL--H 146 (730)
Q Consensus 74 l~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~-~LaSgS~DgtVrVWDl~tg~~l~~l--~ 146 (730)
.++...++..|++++.|++|++||..++ .+.+|...|++++|++++. +|++++.|++|++||+++++.+..+ .
T Consensus 144 ~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~ 223 (357)
T 4g56_B 144 TLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC 223 (357)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec
Confidence 3444567889999999999999999886 4789999999999999875 7899999999999999998877655 4
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCC-CEEEEEEC-CeEEEEEcCCCc
Q 004785 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASG-ELLAVASG-HKLYIWRYNMRE 223 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG-~~LAsgSd-d~I~VWDl~t~~ 223 (730)
.|...+.+++|+|+++.+|++|+.|+.|++||+++++.+..+. |...|.+++|+|++ ++|++++. +.|+|||+++++
T Consensus 224 ~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 5677899999999678899999999999999999998887764 88899999999998 57899985 459999999886
Q ss_pred cccCCeEEecCCCCeEEEEEcc-CCCeEEEEEe
Q 004785 224 ETSSPRIVLRTRRSLRAVHFHP-HAAPLLLTAE 255 (730)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSP-dG~~Llatgs 255 (730)
... ..+|...|++|+|+| |+++|++++.
T Consensus 304 ~~~----~~~H~~~V~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 304 VFR----DLSHRDFVTGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp EEE----ECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred EeE----ECCCCCCEEEEEEeCCCCCEEEEEcC
Confidence 543 568999999999999 6776666553
No 42
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.4e-21 Score=208.93 Aligned_cols=197 Identities=12% Similarity=0.162 Sum_probs=163.1
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCC----C----CCCCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCe-----
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKY----C----PLSPPPRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGS----- 140 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t----~----~L~gH~~~Vt~lafSPD-G~~LaSgS~DgtVrVWDl~tg~----- 140 (730)
++....+..|++++.|+.|++||... . .+.+|...|++++|+|+ +++|++++.|+.|++||+.+++
T Consensus 73 ~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 73 LDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp EEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred EEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 33455778999999999999999987 1 47789999999999998 8999999999999999999886
Q ss_pred -EEE---EEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-------CCCeEEEEEcCCC-CEEEE
Q 004785 141 -CLK---VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-------YRPIASIAFHASG-ELLAV 208 (730)
Q Consensus 141 -~l~---~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h-------~~~V~sVafSPdG-~~LAs 208 (730)
... .+.+|...|.+++|+|+++.++++++.|+.|++||+++++.+..+.. ...|.+++|+|++ .+|++
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 332 34679999999999994489999999999999999999998887753 6789999999998 58888
Q ss_pred EECC----eEEEEEcCCCccccCCeEEe-cCCCCeEEEEEcc-CCCeEEEEEe-----eCCccCCCcceeEeccCC
Q 004785 209 ASGH----KLYIWRYNMREETSSPRIVL-RTRRSLRAVHFHP-HAAPLLLTAE-----VNDLDSSESSLTLATSPG 273 (730)
Q Consensus 209 gSdd----~I~VWDl~t~~~~~~~~~l~-~h~~~V~sVaFSP-dG~~Llatgs-----vwdl~s~~~~~~l~t~sG 273 (730)
++++ .|++||+++.... ...+. .|...|.+++|+| +++++++++. +|++...+....+..+.+
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 306 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTP--LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN 306 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSC--SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS
T ss_pred EECCCCCceEEEEeCCCCCCC--cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC
Confidence 8854 7999999986431 23455 7899999999999 8887777664 888887766666555443
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.89 E-value=7.7e-21 Score=196.07 Aligned_cols=216 Identities=11% Similarity=0.081 Sum_probs=171.3
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC----C-----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe--EEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYCP----L-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS--CLK 143 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~~----L-----~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~--~l~ 143 (730)
.+....+..|++++ |+.|++||..+.. + .+|...|.+++|+|++++|++++.|+.|++||+.+++ ...
T Consensus 57 ~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp EEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE
T ss_pred EEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee
Confidence 33345778888888 9999999987642 2 2789999999999999999999999999999999887 667
Q ss_pred EEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCC
Q 004785 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNM 221 (730)
Q Consensus 144 ~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t 221 (730)
.+..|...|.+++|+| +++++++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++++.+ .|++||+++
T Consensus 136 ~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 136 ELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp EEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC
Confidence 7889999999999999 99999999999999999999999888765 78899999999999999999954 599999998
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCC
Q 004785 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPL 301 (730)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~ 301 (730)
++... ...+...+.+++|+|+++++++++... .+.+++........ ...
T Consensus 215 ~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~~~-----------------------~i~~~~~~~~~~~~----~~~ 263 (337)
T 1gxr_A 215 GRQLQ----QHDFTSQIFSLGYCPTGEWLAVGMESS-----------------------NVEVLHVNKPDKYQ----LHL 263 (337)
T ss_dssp TEEEE----EEECSSCEEEEEECTTSSEEEEEETTS-----------------------CEEEEETTSSCEEE----ECC
T ss_pred CceEe----eecCCCceEEEEECCCCCEEEEEcCCC-----------------------cEEEEECCCCCeEE----EcC
Confidence 86543 346788999999999999877765311 23333322222111 112
Q ss_pred CCCCceeeeEecCCCEEEEEec
Q 004785 302 ITPPFLRPSFVRDDERISLQHT 323 (730)
Q Consensus 302 ~slpil~p~FSpDg~rI~~~~~ 323 (730)
...++..+.|++|++.++....
T Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEET
T ss_pred CccceeEEEECCCCCEEEEecC
Confidence 2345667899999998887443
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=1.4e-21 Score=203.99 Aligned_cols=241 Identities=17% Similarity=0.172 Sum_probs=180.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC----C-----CCCCCCeEEEEECCC----CCEEEEEeCCCeEEEEECCCCeEEEEEe
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP----L-----SPPPRSTIAAAFSPD----GKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~----L-----~gH~~~Vt~lafSPD----G~~LaSgS~DgtVrVWDl~tg~~l~~l~ 146 (730)
+...++++..++.|++||..++. + ..|...|++++|+|+ +++|++++.|+.|++||+.+++.+..+.
T Consensus 33 ~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred CCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec
Confidence 45567777777799999988652 1 237788999999998 6799999999999999999999999999
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe----cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCC
Q 004785 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR----DFYRPIASIAFHASGELLAVASGH-KLYIWRYNM 221 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l----~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t 221 (730)
+|...|.+++|+|.+++++++++.|++|++||+++++.+..+ .|...|.+++|+|++++|++++.+ .|++||+++
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 999999999999978899999999999999999999988886 588999999999999999999954 599999987
Q ss_pred CccccC-------------------------CeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCc-------
Q 004785 222 REETSS-------------------------PRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSES------- 264 (730)
Q Consensus 222 ~~~~~~-------------------------~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~------- 264 (730)
++.... ......|...|.+++|+ ++++++++. +|++.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCT
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccccccc
Confidence 654320 01122388999999999 666666543 777765433
Q ss_pred -------ceeEeccCC-------------cc---cCCCCeEEEecCCCCCCCC-cccccCCC--CCCceeeeEecCCCEE
Q 004785 265 -------SLTLATSPG-------------YW---RYPPPVICMAGAHSSSHPG-LAEEVPLI--TPPFLRPSFVRDDERI 318 (730)
Q Consensus 265 -------~~~l~t~sG-------------~~---~~p~~~V~l~d~~s~d~~~-L~~~~~~~--slpil~p~FSpDg~rI 318 (730)
...+..+.+ .. ......+.+|+........ ........ ..++..++|++|++.|
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 350 (366)
T 3k26_A 271 SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL 350 (366)
T ss_dssp TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE
Confidence 111111111 10 0123467788876654332 11122222 4567789999999998
Q ss_pred EEEe
Q 004785 319 SLQH 322 (730)
Q Consensus 319 ~~~~ 322 (730)
+...
T Consensus 351 ~s~~ 354 (366)
T 3k26_A 351 IAVC 354 (366)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8743
No 45
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1e-21 Score=207.90 Aligned_cols=179 Identities=22% Similarity=0.286 Sum_probs=141.0
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC----C
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT----G 139 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~-----------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~t----g 139 (730)
++....+..|++++.|++|++||.... .+.+|...|.+++|+|+|++|++|+.|++|++||+.. .
T Consensus 64 v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe
Confidence 334456789999999999999998421 3679999999999999999999999999999999943 3
Q ss_pred eEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCC--eEEEEe-cCCCCeEEEEEcCC--CCEEEEEECC-e
Q 004785 140 SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA--ECIGSR-DFYRPIASIAFHAS--GELLAVASGH-K 213 (730)
Q Consensus 140 ~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg--~~i~~l-~h~~~V~sVafSPd--G~~LAsgSdd-~ 213 (730)
+++..+.+|...|.+++|+| ++.+|++++.|++|++||+.++ +++..+ .|...|.+++|+|+ +.+|++++.+ .
T Consensus 144 ~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 144 ECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp EEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred EEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 56788999999999999999 8999999999999999999876 455555 58899999999999 7789999955 5
Q ss_pred EEEEEcCCCccc-----cCCeEEec-CCCCeEEEEEccCCCeEEEEEe
Q 004785 214 LYIWRYNMREET-----SSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 214 I~VWDl~t~~~~-----~~~~~l~~-h~~~V~sVaFSPdG~~Llatgs 255 (730)
|+|||++..... .....+.. |...|++++|++++ ++++++.
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~ 269 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGA 269 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEET
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeC
Confidence 999999764211 00112223 88899999999776 4666553
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.89 E-value=2.2e-21 Score=201.42 Aligned_cols=150 Identities=21% Similarity=0.376 Sum_probs=136.6
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCC
Q 004785 102 PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST 181 (730)
Q Consensus 102 ~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~t 181 (730)
.+.+|...|++++|+|++++|++++.|+.|++||+.+++....+.+|...|.+++|+| ++++|++++.|+.|++||+.+
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCC
Confidence 3678999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CeEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 182 AECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 182 g~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
++.+..+. |...|.+++|+|++++|++++.+ .|++||+++++... .+..|...|.+++|+|+++++++++.
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK---TLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE---EecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99887764 88899999999999999999955 59999999887543 56778999999999999997776653
No 47
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=1.6e-20 Score=194.83 Aligned_cols=241 Identities=15% Similarity=0.160 Sum_probs=183.7
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC
Q 004785 79 DARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~---------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (730)
+.+..|++++.|++|++||+... .+.+|...|.+++|+|||++|++++.|+.|++|+............+.
T Consensus 49 ~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~ 128 (340)
T 4aow_A 49 QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT 128 (340)
T ss_dssp TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCC
Confidence 45679999999999999998653 367899999999999999999999999999999999999998898999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE--ecCCCCeEEEEEcCCC--CEEEEEEC-CeEEEEEcCCCcc
Q 004785 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--RDFYRPIASIAFHASG--ELLAVASG-HKLYIWRYNMREE 224 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~--l~h~~~V~sVafSPdG--~~LAsgSd-d~I~VWDl~t~~~ 224 (730)
..+..+.+++ ++.++++++.|+.+++||+........ ..|...+..++|++++ .++++++. +.|++||+++.+.
T Consensus 129 ~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~ 207 (340)
T 4aow_A 129 KDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 207 (340)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE
T ss_pred CceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce
Confidence 9999999999 889999999999999999987665443 3478899999999876 46777775 4599999998876
Q ss_pred ccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc--C----------CCCeEEEecC
Q 004785 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR--Y----------PPPVICMAGA 287 (730)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~--~----------p~~~V~l~d~ 287 (730)
.. .+.+|...|++++|+|+++++++++. +|++........+........ + ....+.+|+.
T Consensus 208 ~~---~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 208 KT---NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDL 284 (340)
T ss_dssp EE---EECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEET
T ss_pred ee---EecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEEC
Confidence 44 67789999999999999998877654 788776555444332211100 0 1234566665
Q ss_pred CCCCCCCc------ccccCCCCCCceeeeEecCCCEEEEEec
Q 004785 288 HSSSHPGL------AEEVPLITPPFLRPSFVRDDERISLQHT 323 (730)
Q Consensus 288 ~s~d~~~L------~~~~~~~slpil~p~FSpDg~rI~~~~~ 323 (730)
........ ..........+..++|+||++.|+....
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 285 EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp TTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEET
T ss_pred CCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeC
Confidence 44322111 1112233456678999999999887443
No 48
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=1.3e-21 Score=211.11 Aligned_cols=174 Identities=18% Similarity=0.235 Sum_probs=151.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCeEEEEE--
Q 004785 80 ARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDG-KTLASTHGDHTVKIIDCQTGSCLKVL-- 145 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~-----------~L~gH~~~Vt~lafSPDG-~~LaSgS~DgtVrVWDl~tg~~l~~l-- 145 (730)
++..|++++.|++|++||+.++ .+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++.+..+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 7789999999999999998765 255899999999999998 69999999999999999999999999
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCC-eEEEEEcCCCCEEEEE---E-CCeEEEEE
Q 004785 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRP-IASIAFHASGELLAVA---S-GHKLYIWR 218 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l--~h~~~-V~sVafSPdG~~LAsg---S-dd~I~VWD 218 (730)
.+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+ .|.+. +..+.|+|+|++|++| + ++.|++||
T Consensus 173 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 173 DVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp TTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEc
Confidence 88999999999999 9999999999999999999999988876 46554 8999999999999999 4 44599999
Q ss_pred cCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+++.+... ......+...+..++|+|+++++++++.
T Consensus 252 ~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~g~ 287 (402)
T 2aq5_A 252 TKHLEEPL-SLQELDTSSGVLLPFFDPDTNIVYLCGK 287 (402)
T ss_dssp TTBCSSCS-EEEECCCCSSCEEEEEETTTTEEEEEET
T ss_pred CccccCCc-eEEeccCCCceeEEEEcCCCCEEEEEEc
Confidence 98876422 1233457788999999999998877663
No 49
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.89 E-value=5.8e-21 Score=202.59 Aligned_cols=184 Identities=16% Similarity=0.212 Sum_probs=147.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe---c
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH---G 147 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~---g 147 (730)
.+....+..+++++.|++|++||+.++ .+.+|...|.+++|+|++++|++++.|++|++||+... ....+. +
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~ 160 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKEN 160 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTS
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccC
Confidence 334457789999999999999999876 36799999999999999999999999999999999743 343433 7
Q ss_pred CCCCcEEEEEccCCC----------CEEEEEeCCCcEEEEECCCCeEEEE-ecCCCCeEEEEEcCCCCEEEEEEC-CeEE
Q 004785 148 HRRTPWVVRFHPLNP----------TIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAFHASGELLAVASG-HKLY 215 (730)
Q Consensus 148 H~~~V~sVafSP~dg----------~lLaSgS~DgtVrLWDl~tg~~i~~-l~h~~~V~sVafSPdG~~LAsgSd-d~I~ 215 (730)
|...|.+++|+| ++ .++++++.|++|++||.. ++.... ..|...|.+++|+|+|++|++++. +.|+
T Consensus 161 ~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 161 HSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp CSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 889999999999 54 789999999999999954 454444 468899999999999999999995 4599
Q ss_pred EEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe----eCCccCCCc
Q 004785 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE----VNDLDSSES 264 (730)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs----vwdl~s~~~ 264 (730)
|||+...... .....+...|.+++|+|++.+++++.. +|++.....
T Consensus 239 iwd~~~~~~~---~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 239 IWDILNLTYP---QREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSK 288 (343)
T ss_dssp EEESSCCSSC---SEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCS
T ss_pred EEECCCCccc---ceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCC
Confidence 9999554432 133345667999999999986654432 677665443
No 50
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=2e-22 Score=219.00 Aligned_cols=234 Identities=12% Similarity=0.107 Sum_probs=156.6
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECC--------CCCEEEEEeCCCeEEEEECCCCeE
Q 004785 79 DARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSP--------DGKTLASTHGDHTVKIIDCQTGSC 141 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~---------~L~gH~~~Vt~lafSP--------DG~~LaSgS~DgtVrVWDl~tg~~ 141 (730)
..+..|++++.|++|++||...+ .+.+|.+.|++++|+| |+++||+++.|++|+|||+.++.+
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 34567999999999999998764 4789999999999997 899999999999999999999988
Q ss_pred EEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE--------------------------ecCCCCeE
Q 004785 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--------------------------RDFYRPIA 195 (730)
Q Consensus 142 l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~--------------------------l~h~~~V~ 195 (730)
+..+.+|...|.+++|+|++.++|++++.|++|++||+++++.... ..|...+.
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 8888889999999999995557899999999999999998765322 13556788
Q ss_pred EEEEc-CCCCEEEEEECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCcc-CCCcceeEeccC
Q 004785 196 SIAFH-ASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLD-SSESSLTLATSP 272 (730)
Q Consensus 196 sVafS-PdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~-s~~~~~~l~t~s 272 (730)
++.|+ |||+.|++++.+ .+++||+..+.... .+..|...+..+.+.|+++.+.......... .......+....
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN---EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCc---eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 89986 899999999954 59999998876433 4455666666666666654321111100000 000000011000
Q ss_pred CcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEe
Q 004785 273 GYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (730)
Q Consensus 273 G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~ 322 (730)
+ ....|.+|+..++........ ...++..++|+|||+.|++..
T Consensus 336 s----~Dg~V~lwd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 336 S----QHGLIQLINTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp T----TTTEEEEEETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEEE
T ss_pred C----CCCEEEEEECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEEe
Confidence 1 123688888777665444332 344778999999999999743
No 51
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=8.5e-21 Score=205.31 Aligned_cols=235 Identities=15% Similarity=0.208 Sum_probs=182.2
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~-----L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
+..+++++.|+.|++||..++. ...|...|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.++
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 3568889999999999998874 23488999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEeCCCcEEEEECCC-CeEEEE-ecCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeEEe
Q 004785 156 RFHPLNPTIIASGSLDHEVRLWNAST-AECIGS-RDFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRIVL 232 (730)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~t-g~~i~~-l~h~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t~~~~~~~~~l~ 232 (730)
+|++ +++++++.|+.|++||++. +..+.. ..|...|.+++|+|++++|++++. +.|++||+++.+... .+.
T Consensus 183 ~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~---~~~ 256 (401)
T 4aez_A 183 SWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKF---TKT 256 (401)
T ss_dssp EEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEE---EEC
T ss_pred EECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccE---Eec
Confidence 9954 7999999999999999984 444444 458899999999999999999995 459999999876533 566
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe--------eCCccCCCcceeEeccCC----------cc-----cCCCCeEEEecCCC
Q 004785 233 RTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSPG----------YW-----RYPPPVICMAGAHS 289 (730)
Q Consensus 233 ~h~~~V~sVaFSPdG~~Llatgs--------vwdl~s~~~~~~l~t~sG----------~~-----~~p~~~V~l~d~~s 289 (730)
.|...|.+++|+|++..++++++ +|++..+.....+..... .. .+....+.+|+..+
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 78999999999999987877652 778776655444432111 00 01234566666555
Q ss_pred CCCCCcccccCCCCCCceeeeEecCCCEEEEEe
Q 004785 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (730)
Q Consensus 290 ~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~ 322 (730)
+....... ......++..+.|++|++.|+...
T Consensus 337 ~~~~~~~~-~~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 337 SGLTKQVD-IPAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp TEEEEEEE-EECCSSCCCEEEECTTSSEEEEEC
T ss_pred ccceeEEE-ecCCCCCEEEEEECCCCCEEEEEe
Confidence 33322221 123345667889999999988743
No 52
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.88 E-value=2.6e-21 Score=201.46 Aligned_cols=176 Identities=13% Similarity=0.177 Sum_probs=144.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCe--EEEEEecCC
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKVLHGHR 149 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~------L~gH~~~Vt~lafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~l~gH~ 149 (730)
.+..|++++.|++|++||..++. +.+|...|.+++|+|+ |.+|++++.|++|++||++++. ....+.+|.
T Consensus 66 ~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~ 145 (297)
T 2pm7_B 66 FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (297)
T ss_dssp GCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred cCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc
Confidence 36899999999999999998652 4679999999999997 8999999999999999998763 246678999
Q ss_pred CCcEEEEEccCC------------CCEEEEEeCCCcEEEEECCCCe----EEEEe-cCCCCeEEEEEcCCC---CEEEEE
Q 004785 150 RTPWVVRFHPLN------------PTIIASGSLDHEVRLWNASTAE----CIGSR-DFYRPIASIAFHASG---ELLAVA 209 (730)
Q Consensus 150 ~~V~sVafSP~d------------g~lLaSgS~DgtVrLWDl~tg~----~i~~l-~h~~~V~sVafSPdG---~~LAsg 209 (730)
..|.+++|+|+. +++|++|+.|++|++||+++++ ....+ .|...|.+++|+|++ ++|+++
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 999999999932 5799999999999999998765 34444 488999999999995 799999
Q ss_pred ECC-eEEEEEcCCCccccCCeEE--ecCCCCeEEEEEccCCCeEEEEEe
Q 004785 210 SGH-KLYIWRYNMREETSSPRIV--LRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 210 Sdd-~I~VWDl~t~~~~~~~~~l--~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+.+ .|+|||++..........+ ..|...|.+++|+|+|++|++++.
T Consensus 226 s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 955 5999999875321101122 357789999999999998887765
No 53
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.88 E-value=2.6e-20 Score=203.04 Aligned_cols=234 Identities=14% Similarity=0.176 Sum_probs=183.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~ 153 (730)
.+..|+.+ .|++|++||..+++ +.+|...|++++|+|||++|++|+.|++|+|||+.+++.+..+.+|...+.
T Consensus 115 ~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~ 193 (420)
T 4gga_A 115 SGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG 193 (420)
T ss_dssp TTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE
Confidence 34456655 49999999999873 457889999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeE-EEE-ecCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCcccc-CCe
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAEC-IGS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETS-SPR 229 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~-i~~-l~h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~-~~~ 229 (730)
+++|+ +.++++|+.|+.+++||...... +.. ..|...+..+.|+|+|++|++++.++ |++||...++... ...
T Consensus 194 ~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~ 270 (420)
T 4gga_A 194 SLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 270 (420)
T ss_dssp EEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSE
T ss_pred EEeeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeee
Confidence 98885 48999999999999999987543 333 45889999999999999999999555 9999998875432 234
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe--------eCCccCCCcceeEeccCCcc---------------cCCCCeEEEec
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSPGYW---------------RYPPPVICMAG 286 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llatgs--------vwdl~s~~~~~~l~t~sG~~---------------~~p~~~V~l~d 286 (730)
....|...|.+++|+|++..+++++. +|++..+.....+....... .+....+.+|+
T Consensus 271 ~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd 350 (420)
T 4gga_A 271 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWK 350 (420)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEE
T ss_pred eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEE
Confidence 56678899999999999887776542 78877665544433321111 01235688888
Q ss_pred CCCCCCCCcccccCCCCCCceeeeEecCCCEEEE
Q 004785 287 AHSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (730)
Q Consensus 287 ~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~ 320 (730)
..+...... ..+...+++.++|+|||+.|+.
T Consensus 351 ~~~~~~v~~---l~gH~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 351 YPTMAKVAE---LKGHTSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp TTTCCEEEE---ECCCSSCEEEEEECTTSSCEEE
T ss_pred CCCCcEEEE---EcCCCCCEEEEEEcCCCCEEEE
Confidence 766554333 3345668889999999999886
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=4.2e-21 Score=200.07 Aligned_cols=227 Identities=15% Similarity=0.152 Sum_probs=168.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEE------ECCCCCEEEEEeCCCeEEEEECCCCe-EEEEEecC
Q 004785 81 RRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAA------FSPDGKTLASTHGDHTVKIIDCQTGS-CLKVLHGH 148 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~-----L~gH~~~Vt~la------fSPDG~~LaSgS~DgtVrVWDl~tg~-~l~~l~gH 148 (730)
+..|++++.|+.|++||..++. +.+|...|.++. |+|++++|++++.|+.|++||+.+++ .+..+..|
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 6899999999999999998653 678999999995 57899999999999999999999987 67888766
Q ss_pred CC----CcEEEE----EccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcC---CCCEEEEEEC-CeEEE
Q 004785 149 RR----TPWVVR----FHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHA---SGELLAVASG-HKLYI 216 (730)
Q Consensus 149 ~~----~V~sVa----fSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSP---dG~~LAsgSd-d~I~V 216 (730)
.+ .|.+++ |+| +++++++++.|+.|++||+++++......+...|.+++|+| ++++|++++. +.|++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp TTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred CCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 65 788998 678 89999999999999999999999888888999999999999 9999999985 55999
Q ss_pred EEcCCCccccCCe--EEecCCCCeEEEEEccCCCe-EEEEEe-----eCCccCCCcceeEeccCCcccCCCCeEEEecCC
Q 004785 217 WRYNMREETSSPR--IVLRTRRSLRAVHFHPHAAP-LLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAH 288 (730)
Q Consensus 217 WDl~t~~~~~~~~--~l~~h~~~V~sVaFSPdG~~-Llatgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~ 288 (730)
||+++++...... ....|...|++++|+|+++. +++++. +|++.......... ..|.........
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~g~~~~~~~~~------ 311 (357)
T 3i2n_A 239 FDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD-SEGIEMGVAGSV------ 311 (357)
T ss_dssp EEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC-TTSCCCCCCCEE------
T ss_pred EeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc-CCCCcccccccc------
Confidence 9998876543111 22379999999999999994 444443 56665433321111 011100000000
Q ss_pred CCCCCCcccccCCCCCCceeeeEecCCCEEEE
Q 004785 289 SSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (730)
Q Consensus 289 s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~ 320 (730)
...........++..++|++|++.+++
T Consensus 312 -----~~~~~~~~~~~~v~~~~~s~~~~~l~~ 338 (357)
T 3i2n_A 312 -----SLLQNVTLSTQPISSLDWSPDKRGLCV 338 (357)
T ss_dssp -----EEEEEEECCSSCEEEEEECSSSTTEEE
T ss_pred -----ceeeccccCCCCeeEEEEcCCCCeEEE
Confidence 011111223446678899999999885
No 55
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.88 E-value=3.9e-21 Score=215.53 Aligned_cols=174 Identities=27% Similarity=0.390 Sum_probs=151.7
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~---~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
++...++..|++++.|+.|++||.... .+.+|...|++++|+||+++|++++.|++|++||. +++.+..+.+|...
T Consensus 391 ~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~ 469 (577)
T 2ymu_A 391 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 469 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSC
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCC
Confidence 344567889999999999999997544 46789999999999999999999999999999996 67788999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCe
Q 004785 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPR 229 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~~~~ 229 (730)
|.+++|+| +++++++++.|++|++||. +++++..+ .|...|++++|+|||++|+++++++ |+|||+. ++.. .
T Consensus 470 v~~~~~sp-d~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~~~---~ 543 (577)
T 2ymu_A 470 VRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLL---Q 543 (577)
T ss_dssp EEEEEECT-TSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEE---E
T ss_pred EEEEEEcC-CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CCEE---E
Confidence 99999999 9999999999999999996 56666654 5889999999999999999999655 9999964 4432 3
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.+.+|...|++++|+|||++|++++.
T Consensus 544 ~~~~h~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 544 TLTGHSSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEET
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 67889999999999999998887664
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=9.1e-21 Score=199.09 Aligned_cols=175 Identities=15% Similarity=0.152 Sum_probs=147.1
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE--EecC
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV--LHGH 148 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~--l~gH 148 (730)
...++..|++++.|+.|++||..++ .+.+|...|.+++|+|++++|++++.|+.|++||+.+++.... +..|
T Consensus 16 ~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 95 (372)
T 1k8k_C 16 WNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI 95 (372)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCC
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecC
Confidence 3456788999999999999998876 3568999999999999999999999999999999998875544 3679
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeE---EEE--ecCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCC-
Q 004785 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC---IGS--RDFYRPIASIAFHASGELLAVASG-HKLYIWRYNM- 221 (730)
Q Consensus 149 ~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~---i~~--l~h~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t- 221 (730)
...|.+++|+| +++++++++.|+.|++||+..++. ... ..|...|.+++|+|++++|++++. +.|++||++.
T Consensus 96 ~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 174 (372)
T 1k8k_C 96 NRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 174 (372)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCT
T ss_pred CCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccc
Confidence 99999999999 899999999999999999998762 222 347889999999999999999995 4599999752
Q ss_pred -----------------CccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 222 -----------------REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 222 -----------------~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
++. ...+..|...|.+++|+|+++++++++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 222 (372)
T 1k8k_C 175 EVEERPAPTPWGSKMPFGEL---MFESSSSCGWVHGVCFSANGSRVAWVSH 222 (372)
T ss_dssp TTSCCCCCBTTBSCCCTTCE---EEECCCCSSCEEEEEECSSSSEEEEEET
T ss_pred cccccccccccccccchhhh---eEecCCCCCeEEEEEECCCCCEEEEEeC
Confidence 222 2245578889999999999997777653
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.88 E-value=1.6e-20 Score=205.42 Aligned_cols=233 Identities=17% Similarity=0.203 Sum_probs=180.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
.+..|++++.|++|++||..++ .+.+|.+.|.+++|++++ +|++|+.|++|++||+.+++.+..+.+|...|.++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence 4679999999999999999876 477999999999999988 99999999999999999999999999999999999
Q ss_pred EEcc-CCCCEEEEEeCCCcEEEEECCCCeEE-----------------------E-EecCCCCeEEEEEcCCCCEEEEEE
Q 004785 156 RFHP-LNPTIIASGSLDHEVRLWNASTAECI-----------------------G-SRDFYRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 156 afSP-~dg~lLaSgS~DgtVrLWDl~tg~~i-----------------------~-~l~h~~~V~sVafSPdG~~LAsgS 210 (730)
+|++ .++.++++++.|++|++||+.+++.. . ...|...+.++ ++++++|++++
T Consensus 210 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~ 287 (464)
T 3v7d_B 210 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGS 287 (464)
T ss_dssp EEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEE
T ss_pred EEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEe
Confidence 9995 26789999999999999999987532 1 22466667665 67899999999
Q ss_pred CC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc--------
Q 004785 211 GH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR-------- 276 (730)
Q Consensus 211 dd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~-------- 276 (730)
.+ .|++||+++++... .+..|...|.+++|+|+++++++++. +|++..+.....+..+.+.+.
T Consensus 288 ~d~~i~vwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 364 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLY---ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKF 364 (464)
T ss_dssp TTSCEEEEETTTTEEEE---EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSE
T ss_pred CCCeEEEEECCCCcEEE---EecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCE
Confidence 54 59999999887644 66789999999999999998887765 788776665555543333221
Q ss_pred ----CCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEe
Q 004785 277 ----YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (730)
Q Consensus 277 ----~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~ 322 (730)
.....+.+|+........... ........+|++|++.++...
T Consensus 365 l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 365 LVSAAADGSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCceeeeec----CCCCccEEEEEeCCCEEEEec
Confidence 012456677765543222111 122334678999999888743
No 58
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.2e-21 Score=201.50 Aligned_cols=238 Identities=13% Similarity=0.163 Sum_probs=179.5
Q ss_pred ecCCC-EEEEEeCCCeEEEEeC----CCCC----------CC----------CCCCCeEEEEECCCCCEEEEEeCCCeEE
Q 004785 78 RDARR-GLASWVEAESLHHLRP----KYCP----------LS----------PPPRSTIAAAFSPDGKTLASTHGDHTVK 132 (730)
Q Consensus 78 ~d~g~-~L~Sgs~DgsIrlWd~----~t~~----------L~----------gH~~~Vt~lafSPDG~~LaSgS~DgtVr 132 (730)
...+. .|++++.|+.|++|+. .++. +. +|...|++++|+|++++|++++.|+.|+
T Consensus 54 s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 133 (425)
T 1r5m_A 54 NPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELR 133 (425)
T ss_dssp CSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEE
Confidence 34566 9999999999999999 6543 11 2677999999999999999999999999
Q ss_pred EEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-CCC---------------eEE
Q 004785 133 IIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRP---------------IAS 196 (730)
Q Consensus 133 VWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h-~~~---------------V~s 196 (730)
+|| .+++.+..+.+|...|.+++|+| +++++++++.|+.|++||+.+++.+..+.. ... +.+
T Consensus 134 i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (425)
T 1r5m_A 134 LWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVD 211 (425)
T ss_dssp EEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSC
T ss_pred EEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeE
Confidence 999 77888999999999999999999 999999999999999999999998887653 333 899
Q ss_pred EEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEecc
Q 004785 197 IAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATS 271 (730)
Q Consensus 197 VafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~ 271 (730)
++|+|++.+++.+.++.|++||+++++.. ..+..|...|.+++|+|+++++++++. +|++........+..+
T Consensus 212 ~~~~~~~~~~~~~~~g~i~~~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 288 (425)
T 1r5m_A 212 VEWVDDDKFVIPGPKGAIFVYQITEKTPT---GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH 288 (425)
T ss_dssp CEEEETTEEEEECGGGCEEEEETTCSSCS---EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCC
T ss_pred EEEcCCCEEEEEcCCCeEEEEEcCCCcee---eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCC
Confidence 99999876444444666999999987653 366789999999999999998877664 7887766655555433
Q ss_pred CCccc-------------CCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEec
Q 004785 272 PGYWR-------------YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (730)
Q Consensus 272 sG~~~-------------~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~ 323 (730)
.+... .....+.+|+........... ....++..+.|+||++.|++...
T Consensus 289 ~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 289 SQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSI---VDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEE---CTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecc---cCCccEEEEEEcCCCCEEEEEEC
Confidence 32211 012456667765544332222 23446678899999999887543
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.88 E-value=7.6e-22 Score=209.35 Aligned_cols=179 Identities=16% Similarity=0.148 Sum_probs=144.3
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe---EEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS---CLKV 144 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~~-------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~---~l~~ 144 (730)
++....+..|++++.|++|++||..++. +.+|...|.+++|+|++++|++++.|+.|++||+++++ ....
T Consensus 61 ~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 61 VDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp EEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeE
Confidence 3444567899999999999999988653 67899999999999999999999999999999999887 4778
Q ss_pred Eec-CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECC------------------CCeEEEEecCCCCeEEEEEcCCCCE
Q 004785 145 LHG-HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS------------------TAECIGSRDFYRPIASIAFHASGEL 205 (730)
Q Consensus 145 l~g-H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~------------------tg~~i~~l~h~~~V~sVafSPdG~~ 205 (730)
+.+ |...|.+++|+| +++++++++.|++|++||+. .++++..+.|...|.+++|+|+|++
T Consensus 141 ~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp ECSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC
T ss_pred eecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCE
Confidence 888 999999999999 89999999999999999985 3445555678889999999999999
Q ss_pred EEEEECC-eEEEEEcCCCcccc-CCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 206 LAVASGH-KLYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 206 LAsgSdd-~I~VWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
|++++.+ .|++||+.+++... ....+..|...|.+++|+|+|++++++.
T Consensus 220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred EEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 9999955 59999999887511 0235778999999999999999665543
No 60
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=8.2e-20 Score=193.46 Aligned_cols=245 Identities=13% Similarity=0.100 Sum_probs=184.4
Q ss_pred EEEec-CCCEEEEEeCCCeEEEEeCCCCCC-----------------CCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEE
Q 004785 75 EAGRD-ARRGLASWVEAESLHHLRPKYCPL-----------------SPPPRSTIAAAFSP-DGKTLASTHGDHTVKIID 135 (730)
Q Consensus 75 ~a~~d-~g~~L~Sgs~DgsIrlWd~~t~~L-----------------~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWD 135 (730)
++... .+..|++++.|+.|++||..+... .+|...|.+++|+| ++.+|++++.|+.|++||
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 128 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWD 128 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEee
Confidence 34444 788999999999999999987521 35999999999999 788999999999999999
Q ss_pred CCCCeEEEEEecCCCCcEEEEEccCC--CCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCC-EEEEEEC
Q 004785 136 CQTGSCLKVLHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGE-LLAVASG 211 (730)
Q Consensus 136 l~tg~~l~~l~gH~~~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~-~LAsgSd 211 (730)
+.+++.+..+. +...+.++.|++.+ +.++++++.|+.|++||+++++.+..+. |...|.+++|+|+++ +|++++.
T Consensus 129 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 129 TNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET
T ss_pred CCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC
Confidence 99999888886 77789999999842 3399999999999999999998877765 889999999999999 5888885
Q ss_pred C-eEEEEEcCCCcccc-------------CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccC
Q 004785 212 H-KLYIWRYNMREETS-------------SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSP 272 (730)
Q Consensus 212 d-~I~VWDl~t~~~~~-------------~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~s 272 (730)
+ .|++||++...... .......|...|.+++|+|+++++++++. +|++........+....
T Consensus 208 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 287 (408)
T 4a11_B 208 DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKV 287 (408)
T ss_dssp TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCC
T ss_pred CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccc
Confidence 4 59999998765211 01112568889999999999998887765 77777655432221110
Q ss_pred Cccc-------------------CCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEec
Q 004785 273 GYWR-------------------YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (730)
Q Consensus 273 G~~~-------------------~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~ 323 (730)
.... .....+.+|+..++...... .....++..++|+||++.|+....
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~ 354 (408)
T 4a11_B 288 CNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML---KGHYKTVDCCVFQSNFQELYSGSR 354 (408)
T ss_dssp CCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE---CCCSSCEEEEEEETTTTEEEEEET
T ss_pred cccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee---ccCCCeEEEEEEcCCCCEEEEECC
Confidence 0000 01245677776665543333 234456778999999999887433
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.87 E-value=1.3e-20 Score=203.96 Aligned_cols=175 Identities=21% Similarity=0.307 Sum_probs=154.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~-----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~s 154 (730)
.+..+++++.|+.|++||+... .+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..|...|.+
T Consensus 185 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 185 NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKA 264 (401)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCE
T ss_pred CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEE
Confidence 4568889999999999998743 46789999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCCEEEEEe--CCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE---CCeEEEEEcCCCccccCCe
Q 004785 155 VRFHPLNPTIIASGS--LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS---GHKLYIWRYNMREETSSPR 229 (730)
Q Consensus 155 VafSP~dg~lLaSgS--~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS---dd~I~VWDl~t~~~~~~~~ 229 (730)
++|+|++..++++++ .|+.|++||+.+++.+..+.+...|.+++|+|+|++|++++ ++.|+|||+.+++... ..
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~-~~ 343 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTK-QV 343 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEE-EE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcccee-EE
Confidence 999996678888876 79999999999999999999999999999999999999864 4559999998865433 23
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.+..|...|.+++|+|+|+++++++.
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEEEEECT
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeC
Confidence 46689999999999999998777654
No 62
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.87 E-value=2.2e-20 Score=193.72 Aligned_cols=178 Identities=16% Similarity=0.166 Sum_probs=154.2
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCC--CEEEEEeCCCeEEEEECCCCeEEEEEecCC
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDG--KTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~-----~L~gH~~~Vt~lafSPDG--~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (730)
....+..|++++.|+.+++||.... .+.+|...|.+++|++++ .++++++.|+.|++||+.+++.+..+.+|.
T Consensus 136 ~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~ 215 (340)
T 4aow_A 136 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 215 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCC
Confidence 3446778999999999999998754 467899999999999864 578899999999999999999999999999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccC--
Q 004785 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSS-- 227 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~-- 227 (730)
+.|++++|+| ++++|++++.|++|++||+++++.+..+.+...|.++.|+|++.+++.+.++.|+|||++.......
T Consensus 216 ~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 294 (340)
T 4aow_A 216 GYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELK 294 (340)
T ss_dssp SCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEC
T ss_pred CcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEecc
Confidence 9999999999 9999999999999999999999999999988999999999999998888888899999987654221
Q ss_pred ----CeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 228 ----PRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 228 ----~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
......|...|++++|+|||++|++++.
T Consensus 295 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 295 QEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp CC-------CCCCCEEEEEECTTSSEEEEEET
T ss_pred ccceeeeccCCCCCEEEEEECCCCCEEEEEeC
Confidence 1123467889999999999998877664
No 63
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.7e-21 Score=222.06 Aligned_cols=170 Identities=10% Similarity=0.033 Sum_probs=143.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCC---------------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe-EEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYC---------------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-CLKV 144 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~---------------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~-~l~~ 144 (730)
+..|++++.|++|++||+..+ .+.+|...|++++|+++ ..|++|+.|++|++||++++. ....
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~ 303 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFY 303 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEE
Confidence 568999999999999998754 24679999999999986 489999999999999999774 4567
Q ss_pred EecCCCCcEEE--EEccCCC-CEEEEEeCCCcEEEEECCCCeEEEEe-cCC--CCeEEEEEcCCCCEEEEEECC-eEEEE
Q 004785 145 LHGHRRTPWVV--RFHPLNP-TIIASGSLDHEVRLWNASTAECIGSR-DFY--RPIASIAFHASGELLAVASGH-KLYIW 217 (730)
Q Consensus 145 l~gH~~~V~sV--afSP~dg-~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~--~~V~sVafSPdG~~LAsgSdd-~I~VW 217 (730)
+.+|...|.+| .|+| ++ ++|+|++.|++|+|||++++++...+ .|. ..|.+++|+|+++.|++++++ .|++|
T Consensus 304 ~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lw 382 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAV 382 (524)
T ss_dssp EECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEE
T ss_pred eecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEE
Confidence 89999999999 5677 66 89999999999999999987765543 233 358899999999999988855 59999
Q ss_pred EcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 218 RYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 218 Dl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
|++++... ..+.+|...|++|+|+|+|++|++++.
T Consensus 383 d~~~~~~~---~~l~gH~~~V~sva~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 383 PSRAAFAV---HPLVSRETTITAIGVSRLHPMVLAGSA 417 (524)
T ss_dssp ETTCTTCC---EEEEECSSCEEEEECCSSCCBCEEEET
T ss_pred ECcccccc---eeeecCCCceEEEEeCCCCCeEEEEEC
Confidence 99987643 357789999999999999998877665
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=1.5e-20 Score=195.82 Aligned_cols=216 Identities=13% Similarity=0.174 Sum_probs=162.0
Q ss_pred CCEEEEEeCCCeEEEEeCCC-C-----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEE
Q 004785 81 RRGLASWVEAESLHHLRPKY-C-----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t-~-----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~s 154 (730)
+..|++++.|+.|++||..+ + .+.+|...|++++|+|++++|++++.|+.|++||+.+++.+. +.+|...|.+
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~ 132 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKT 132 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEE
Confidence 58999999999999999986 3 366899999999999999999999999999999999998766 5679999999
Q ss_pred EEE--ccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC-----------------------------------------
Q 004785 155 VRF--HPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY----------------------------------------- 191 (730)
Q Consensus 155 Vaf--SP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~----------------------------------------- 191 (730)
++| +| ++.++++++.|+.|++||+++++.+..+...
T Consensus 133 ~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 211 (368)
T 3mmy_A 133 IHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPL 211 (368)
T ss_dssp EEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSC
T ss_pred EEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccc
Confidence 999 88 8889999999999999999988765554322
Q ss_pred -CCeEEEEEcCCCCE----EEEEEC-CeEEEEEcCCCccccCCeEEecCCC------------CeEEEEEccCCCeEEEE
Q 004785 192 -RPIASIAFHASGEL----LAVASG-HKLYIWRYNMREETSSPRIVLRTRR------------SLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 192 -~~V~sVafSPdG~~----LAsgSd-d~I~VWDl~t~~~~~~~~~l~~h~~------------~V~sVaFSPdG~~Llat 253 (730)
..+..+++.+++.. +++++. +.|++||++..........+..|.. .|.+++|+|++++++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 291 (368)
T 3mmy_A 212 KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV 291 (368)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE
T ss_pred cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEE
Confidence 23445555544443 777775 4599999988754223445556654 79999999999988777
Q ss_pred EeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecC
Q 004785 254 AEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (730)
Q Consensus 254 gsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~ 324 (730)
+... .+.+|+..+...... ......++..++|+||++.|+....+
T Consensus 292 ~~dg-----------------------~i~iwd~~~~~~~~~---~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 292 GSDG-----------------------RFSFWDKDARTKLKT---SEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp ETTS-----------------------CEEEEETTTTEEEEE---CCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred ccCC-----------------------eEEEEECCCCcEEEE---ecCCCCCceEEEECCCCCeEEEEecc
Confidence 6411 233333332222111 11233466789999999999985543
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.87 E-value=9.2e-21 Score=203.59 Aligned_cols=215 Identities=11% Similarity=0.061 Sum_probs=161.6
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEE
Q 004785 79 DARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~s 154 (730)
..+..|++++.|+.|++||..+. .+..| ..+....|++++++|++++.|+.|++||+.+++.+..+.+|.+.|.+
T Consensus 66 ~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 144 (420)
T 3vl1_A 66 KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITK 144 (420)
T ss_dssp EEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEE
T ss_pred ecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEE
Confidence 35678999999999999999875 23444 44556678999999999999999999999999998888999999999
Q ss_pred EEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEEe
Q 004785 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL 232 (730)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~~~~~l~ 232 (730)
++|+| ++++|++++.|++|++||+.+++.+..+. |...|.+++|+|++++|++++.++ |++||+++++.........
T Consensus 145 ~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 223 (420)
T 3vl1_A 145 LKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKE 223 (420)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTT
T ss_pred EEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCC
Confidence 99999 89999999999999999999998877764 889999999999999999999554 9999999887544111111
Q ss_pred cCCCCeEEEEE---------------------ccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCC
Q 004785 233 RTRRSLRAVHF---------------------HPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSS 291 (730)
Q Consensus 233 ~h~~~V~sVaF---------------------SPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d 291 (730)
.+...|.++.| +|+|+++++++.. ..+.+|+...+.
T Consensus 224 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------------------g~i~i~d~~~~~ 280 (420)
T 3vl1_A 224 NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS-----------------------GVITVHNVFSKE 280 (420)
T ss_dssp BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT-----------------------SCEEEEETTTCC
T ss_pred CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC-----------------------CeEEEEECCCCc
Confidence 24445555554 6677665554421 134444443332
Q ss_pred CCCcccccCCCCCCceeeeEecCCC-EEEE
Q 004785 292 HPGLAEEVPLITPPFLRPSFVRDDE-RISL 320 (730)
Q Consensus 292 ~~~L~~~~~~~slpil~p~FSpDg~-rI~~ 320 (730)
... ........++..+.|+|+++ .++.
T Consensus 281 ~~~--~~~~~~~~~v~~~~~~~~~~~~l~~ 308 (420)
T 3vl1_A 281 QTI--QLPSKFTCSCNSLTVDGNNANYIYA 308 (420)
T ss_dssp EEE--EECCTTSSCEEEEEECSSCTTEEEE
T ss_pred eeE--EcccccCCCceeEEEeCCCCCEEEE
Confidence 211 11112334566889999999 6665
No 66
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.4e-21 Score=202.50 Aligned_cols=216 Identities=16% Similarity=0.203 Sum_probs=162.8
Q ss_pred CEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC----CeEEEEEecCCCC
Q 004785 82 RGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT----GSCLKVLHGHRRT 151 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~t----g~~l~~l~gH~~~ 151 (730)
..+++.+.|+.|++||..++. ...|...|++++|+|++++|++++.|+.|++||+.+ .+.+..+.+|...
T Consensus 36 ~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~ 115 (416)
T 2pm9_A 36 TVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSS 115 (416)
T ss_dssp CCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSC
T ss_pred ccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccc
Confidence 333334899999999998652 246889999999999999999999999999999987 4578889999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCcEEEEECCCCe------EEEE----ecCCCCeEEEEEcCC-CCEEEEEECC-eEEEEEc
Q 004785 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAE------CIGS----RDFYRPIASIAFHAS-GELLAVASGH-KLYIWRY 219 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~------~i~~----l~h~~~V~sVafSPd-G~~LAsgSdd-~I~VWDl 219 (730)
|.+++|+|++++++++++.|++|++||+.+++ .... ..|...|.+++|+|+ +.+|++++.+ .|++||+
T Consensus 116 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 195 (416)
T 2pm9_A 116 VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDL 195 (416)
T ss_dssp CCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEET
T ss_pred eEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEEC
Confidence 99999999448999999999999999999886 3332 357889999999999 6899998854 5999999
Q ss_pred CCCccccCCeEEecC------CCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCC-C
Q 004785 220 NMREETSSPRIVLRT------RRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSS-H 292 (730)
Q Consensus 220 ~t~~~~~~~~~l~~h------~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d-~ 292 (730)
++++... .+..+ ...|.+++|+|++..+++++..+... ..+.+|+..... .
T Consensus 196 ~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~-------------------~~i~~~d~~~~~~~ 253 (416)
T 2pm9_A 196 KAKKEVI---HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND-------------------PSILIWDLRNANTP 253 (416)
T ss_dssp TTTEEEE---EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS-------------------CCCCEEETTSTTSC
T ss_pred CCCCcce---EEeccccccccCCceEEEEECCCCCCEEEEEECCCCC-------------------ceEEEEeCCCCCCC
Confidence 9887543 33333 78899999999986555555432100 134445544332 1
Q ss_pred CCcccccCCCCCCceeeeEec-CCCEEEEE
Q 004785 293 PGLAEEVPLITPPFLRPSFVR-DDERISLQ 321 (730)
Q Consensus 293 ~~L~~~~~~~slpil~p~FSp-Dg~rI~~~ 321 (730)
..... .....++..+.|+| |++.++..
T Consensus 254 ~~~~~--~~~~~~v~~~~~s~~~~~~l~s~ 281 (416)
T 2pm9_A 254 LQTLN--QGHQKGILSLDWCHQDEHLLLSS 281 (416)
T ss_dssp SBCCC--SCCSSCEEEEEECSSCSSCEEEE
T ss_pred cEEee--cCccCceeEEEeCCCCCCeEEEE
Confidence 11111 02344667899999 77777763
No 67
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.9e-20 Score=193.85 Aligned_cols=218 Identities=15% Similarity=0.213 Sum_probs=171.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCC
Q 004785 103 LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA 182 (730)
Q Consensus 103 L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg 182 (730)
+.+|.+.|++++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||+.++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTC
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC
Confidence 578999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred eEEEEecCCCCeEEEEEcCCCCEEEEEECC------eEEEEEcCCCcccc--------CCeEEecCCC--CeEEEEEccC
Q 004785 183 ECIGSRDFYRPIASIAFHASGELLAVASGH------KLYIWRYNMREETS--------SPRIVLRTRR--SLRAVHFHPH 246 (730)
Q Consensus 183 ~~i~~l~h~~~V~sVafSPdG~~LAsgSdd------~I~VWDl~t~~~~~--------~~~~l~~h~~--~V~sVaFSPd 246 (730)
+.+..+.+...+.+++|+|++++|++++++ .|++||+....... ....+..|.. .+.+++|+|+
T Consensus 107 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 107 QCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp CEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred cEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 999998899999999999999999999864 59999998765321 1233444555 8999999999
Q ss_pred CCeEEEEEe-----eCCccC-CCcceeEeccCCccc--------------CCCCeEEEecCCCCCCCCcccccCCCCCCc
Q 004785 247 AAPLLLTAE-----VNDLDS-SESSLTLATSPGYWR--------------YPPPVICMAGAHSSSHPGLAEEVPLITPPF 306 (730)
Q Consensus 247 G~~Llatgs-----vwdl~s-~~~~~~l~t~sG~~~--------------~p~~~V~l~d~~s~d~~~L~~~~~~~slpi 306 (730)
++++++++. +|++.. ......+..+.+.+. .....+.+|+........... ...++
T Consensus 187 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~~ 262 (369)
T 3zwl_B 187 GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE----TDCPL 262 (369)
T ss_dssp GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSCE
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec----CCCCc
Confidence 998877654 777775 333333333322211 012456667765544333322 23456
Q ss_pred eeeeEecCCCEEEEEecCC
Q 004785 307 LRPSFVRDDERISLQHTEH 325 (730)
Q Consensus 307 l~p~FSpDg~rI~~~~~~~ 325 (730)
....|+++++.+++...+.
T Consensus 263 ~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEECSSSSEEEEEECCC
T ss_pred eeEEecCCCceEEEeecCC
Confidence 6789999999999855443
No 68
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.8e-20 Score=196.58 Aligned_cols=181 Identities=13% Similarity=0.164 Sum_probs=150.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCe--EEEEEecCCC
Q 004785 81 RRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKVLHGHRR 150 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~l~gH~~ 150 (730)
+..|++++.|+.|++||..++ .+.+|...|.+++|+|+ +.+|++++.|+.|++||+.++. ....+.+|..
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 789999999999999998876 35689999999999999 9999999999999999998873 4456788999
Q ss_pred CcEEEEEccC------------CCCEEEEEeCCCcEEEEECCCCeE----EEEe-cCCCCeEEEEEcCC---CCEEEEEE
Q 004785 151 TPWVVRFHPL------------NPTIIASGSLDHEVRLWNASTAEC----IGSR-DFYRPIASIAFHAS---GELLAVAS 210 (730)
Q Consensus 151 ~V~sVafSP~------------dg~lLaSgS~DgtVrLWDl~tg~~----i~~l-~h~~~V~sVafSPd---G~~LAsgS 210 (730)
.|.+++|+|. ++.++++++.|+.|++||+++++. +..+ .|...|.+++|+|+ +++|++++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 9999999995 589999999999999999987643 2333 48889999999999 89999999
Q ss_pred CC-eEEEEEcCCCccccCCeE--EecCCCCeEEEEEccCCCeEEEEEe-----eCCccC
Q 004785 211 GH-KLYIWRYNMREETSSPRI--VLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (730)
Q Consensus 211 dd-~I~VWDl~t~~~~~~~~~--l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s 261 (730)
.+ .|+|||++.+........ ...|...|.+++|+|+|+++++++. +|++..
T Consensus 229 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 54 599999988743211111 2337889999999999998888765 666653
No 69
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.2e-20 Score=197.28 Aligned_cols=245 Identities=11% Similarity=0.075 Sum_probs=184.6
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~---~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (730)
..++....+..|++++.|+.|++||.... .+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+.
T Consensus 112 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 191 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKE 191 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccc
Confidence 33444557889999999999999995433 477899999999999999999999999999999999999999998888
Q ss_pred CC---------------cEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEEC-C
Q 004785 150 RT---------------PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG-H 212 (730)
Q Consensus 150 ~~---------------V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSd-d 212 (730)
.. +.++.|+| + ..+++++.|+.|++||+.+++.+..+ .|...|.+++|+|++++|++++. +
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 192 TGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp --------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred cCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 77 99999998 4 56889999999999999998877765 58889999999999999999995 4
Q ss_pred eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc---C-------
Q 004785 213 KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y------- 277 (730)
Q Consensus 213 ~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~---~------- 277 (730)
.|++||+++++.. ..+..|...|.+++|+|++ ++++++. +|++........+..+.+... +
T Consensus 270 ~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 270 TLRIWHGGNGNSQ---NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKY 345 (425)
T ss_dssp CEEEECSSSBSCS---EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEE
T ss_pred EEEEEECCCCccc---eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEE
Confidence 5999999887643 3667789999999999999 5666553 788776655444443322211 0
Q ss_pred ----CCCeEEEecCCCCCC-----------------CCcccccCCCCC--CceeeeEecCCCEEEEEec
Q 004785 278 ----PPPVICMAGAHSSSH-----------------PGLAEEVPLITP--PFLRPSFVRDDERISLQHT 323 (730)
Q Consensus 278 ----p~~~V~l~d~~s~d~-----------------~~L~~~~~~~sl--pil~p~FSpDg~rI~~~~~ 323 (730)
....+.+|+...... ............ ++..+.|++|++.|++...
T Consensus 346 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 346 AVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS 414 (425)
T ss_dssp EEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES
T ss_pred EEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec
Confidence 123455666543330 002222223322 6678999999998887443
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=1.7e-20 Score=219.27 Aligned_cols=237 Identities=11% Similarity=0.110 Sum_probs=185.2
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
++....+..|++++.|+.|++||..++ .+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|.+
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 98 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD 98 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC
Confidence 344557889999999999999999876 4678999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCC-eEEEEe-cCCCCeEEEEEcC-CCCEEEEEEC-CeEEEEEcCCCcccc
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTA-ECIGSR-DFYRPIASIAFHA-SGELLAVASG-HKLYIWRYNMREETS 226 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg-~~i~~l-~h~~~V~sVafSP-dG~~LAsgSd-d~I~VWDl~t~~~~~ 226 (730)
.|.+++|+| ++.++++++.|++|++||+.++ .....+ .|...|.+++|+| ++++|++++. +.|++||+..+....
T Consensus 99 ~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 99 YIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred CEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 999999999 8999999999999999999987 554544 5889999999999 8899999985 559999998776432
Q ss_pred CCeEEec-CCCCeEEEEEcc--CCCeEEEEEe-----eCCccCCCcceeEeccCCccc---C-----------CCCeEEE
Q 004785 227 SPRIVLR-TRRSLRAVHFHP--HAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y-----------PPPVICM 284 (730)
Q Consensus 227 ~~~~l~~-h~~~V~sVaFSP--dG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~---~-----------p~~~V~l 284 (730)
.... +...+..++|+| ++.++++++. +|++..+.....+..+.+.+. + ....+.+
T Consensus 178 ---~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v 254 (814)
T 3mkq_A 178 ---TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI 254 (814)
T ss_dssp ---EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ---EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3333 458899999999 8987777654 777776655554444333221 0 1234566
Q ss_pred ecCCCCCCCCcccccCCCCCCceeeeEecCCCEE
Q 004785 285 AGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERI 318 (730)
Q Consensus 285 ~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI 318 (730)
|+..+....... .....+++.++|+|+++.+
T Consensus 255 wd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 255 WNSSTYKVEKTL---NVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp EETTTCSEEEEE---CCSSSSEEEEEECTTCGGG
T ss_pred EECCCCcEEEEe---ecCCCcEEEEEEccCCCce
Confidence 665544332222 2233466788999998853
No 71
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.86 E-value=1.2e-20 Score=206.91 Aligned_cols=192 Identities=15% Similarity=0.118 Sum_probs=145.5
Q ss_pred CCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCeE--EEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECC
Q 004785 104 SPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSC--LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS 180 (730)
Q Consensus 104 ~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg~~--l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~ 180 (730)
.+|...|+||+|+| ++++||+|+.||+|+|||+.+++. +..+.+|.+.|++|+|+|.++++|++++.|++|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 46888999999999 678999999999999999987754 344568999999999999778999999999999999998
Q ss_pred CCeEEEEec---CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEee
Q 004785 181 TAECIGSRD---FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEV 256 (730)
Q Consensus 181 tg~~i~~l~---h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsv 256 (730)
++....... +...+.+++|+|++++|++|+.+ .|++||++.... ..+..|...|.+++|+|++..++++++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~----~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL----WNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC----CCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee----EEEecccceEEeeeecCCCceEEEEecC
Confidence 766544433 33467899999999999999955 599999975432 3467899999999999999877776641
Q ss_pred CCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEE
Q 004785 257 NDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 257 wdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
+ ..+.+|+..................++..++|+||+.+|+..
T Consensus 272 d----------------------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 272 D----------------------QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp T----------------------SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE
T ss_pred c----------------------ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE
Confidence 1 122333333322222222222334466678999999998863
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.86 E-value=5.2e-20 Score=226.21 Aligned_cols=152 Identities=23% Similarity=0.362 Sum_probs=136.9
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH 148 (730)
..++...++..|++++.|++|++||..++ .+.+|...|.+++|+|||++|++++.|++|+|||+.+++.+..+.+|
T Consensus 619 ~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 619 YHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 34455668899999999999999999887 47899999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEccC-CCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCcc
Q 004785 149 RRTPWVVRFHPL-NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREE 224 (730)
Q Consensus 149 ~~~V~sVafSP~-dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~ 224 (730)
...|.+++|+|+ +..++++++.|++|++||+.+++++..+ .|...|.+++|+|+|++|++++.+ .|++||+.++..
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANE 777 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcc
Confidence 999999999984 3458899999999999999999988775 588999999999999999999954 599999987654
No 73
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.86 E-value=5.1e-20 Score=201.89 Aligned_cols=174 Identities=16% Similarity=0.274 Sum_probs=147.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCC----------C----CCCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCeE---
Q 004785 80 ARRGLASWVEAESLHHLRPKY----------C----PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSC--- 141 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t----------~----~L~gH~~~Vt~lafSPDG~-~LaSgS~DgtVrVWDl~tg~~--- 141 (730)
++..|++++.++.|++|+... . .+.+|...|++++|+|++. +|++|+.|+.|++||+.++..
T Consensus 140 ~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 219 (430)
T 2xyi_A 140 NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR 219 (430)
T ss_dssp EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG
T ss_pred CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc
Confidence 367899999999999999875 2 3568999999999999988 999999999999999987422
Q ss_pred ----EEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCC---eEEEEe-cCCCCeEEEEEcCCCC-EEEEEEC-
Q 004785 142 ----LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA---ECIGSR-DFYRPIASIAFHASGE-LLAVASG- 211 (730)
Q Consensus 142 ----l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg---~~i~~l-~h~~~V~sVafSPdG~-~LAsgSd- 211 (730)
...+.+|...|.+++|+|.++.+|++++.|+.|++||++++ +.+..+ .|...|++++|+|+++ +|++++.
T Consensus 220 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d 299 (430)
T 2xyi_A 220 VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD 299 (430)
T ss_dssp EEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred eeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC
Confidence 46678999999999999977899999999999999999987 344444 6889999999999997 6888885
Q ss_pred CeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 212 HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 212 d~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+.|++||++.... ....+..|...|.+++|+|+++++++++.
T Consensus 300 g~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 300 KTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp SEEEEEETTCTTS--CSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred CeEEEEeCCCCCC--CeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence 4599999988543 23467779999999999999987666654
No 74
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.86 E-value=3.2e-20 Score=190.39 Aligned_cols=123 Identities=18% Similarity=0.216 Sum_probs=108.3
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC----eEEEEEecCCCCcEEEEEccC-CCCEEEEEeCCCcEEE
Q 004785 102 PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG----SCLKVLHGHRRTPWVVRFHPL-NPTIIASGSLDHEVRL 176 (730)
Q Consensus 102 ~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg----~~l~~l~gH~~~V~sVafSP~-dg~lLaSgS~DgtVrL 176 (730)
.+.+|.+.|++++|+|++++|++++.|+.|++||+.++ +.+..+.+|...|.+++|+|. ++++|++++.|++|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 35789999999999999999999999999999999876 467788999999999999984 4899999999999999
Q ss_pred EECCCC---------eEEEEe-cCCCCeEEEEEcCC--CCEEEEEEC-CeEEEEEcCCCcc
Q 004785 177 WNASTA---------ECIGSR-DFYRPIASIAFHAS--GELLAVASG-HKLYIWRYNMREE 224 (730)
Q Consensus 177 WDl~tg---------~~i~~l-~h~~~V~sVafSPd--G~~LAsgSd-d~I~VWDl~t~~~ 224 (730)
||+.++ +.+..+ .|...|.+++|+|+ +++|++++. +.|++||+++++.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSD 146 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTC
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHH
Confidence 999987 444444 58899999999999 999999995 4599999987653
No 75
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.4e-21 Score=217.99 Aligned_cols=208 Identities=9% Similarity=0.018 Sum_probs=151.7
Q ss_pred CEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCC------CCEEEEEeCCCeEEEEECCCCeE------
Q 004785 82 RGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPD------GKTLASTHGDHTVKIIDCQTGSC------ 141 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~--------L~gH~~~Vt~lafSPD------G~~LaSgS~DgtVrVWDl~tg~~------ 141 (730)
..+++++.|++|++|+..++. +.+|.+.|.+++|+|+ +.+||+++.|++|+|||+.+++.
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 357888999999999987764 3467889999999996 57999999999999999987642
Q ss_pred -----EEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCe-EEE-EecCCCCeEEE--EEcCCC-CEEEEEEC
Q 004785 142 -----LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAE-CIG-SRDFYRPIASI--AFHASG-ELLAVASG 211 (730)
Q Consensus 142 -----l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~-~i~-~l~h~~~V~sV--afSPdG-~~LAsgSd 211 (730)
...+.+|...|++++|++ + ..|++|+.||+|++||+++++ +.. ...|...|.++ +|+|+| ++|++++.
T Consensus 254 ~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 254 MCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 247889999999999998 4 489999999999999999764 333 34689999999 578888 89999995
Q ss_pred C-eEEEEEcCCCccccCCeEEecCC--CCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCC
Q 004785 212 H-KLYIWRYNMREETSSPRIVLRTR--RSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAH 288 (730)
Q Consensus 212 d-~I~VWDl~t~~~~~~~~~l~~h~--~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~ 288 (730)
+ .|+|||+++++... .+.+|. ..|.+++|+|+++.+++++... .+.+|+..
T Consensus 332 D~tvklWD~~~~~~~~---~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~-----------------------tv~lwd~~ 385 (524)
T 2j04_B 332 DGYFYIFNPKDIATTK---TTVSRFRGSNLVPVVYCPQIYSYIYSDGAS-----------------------SLRAVPSR 385 (524)
T ss_dssp TSEEEEECGGGHHHHC---EEEEECSCCSCCCEEEETTTTEEEEECSSS-----------------------EEEEEETT
T ss_pred CCeEEEEECCCCCccc---ccccccccCcccceEeCCCcCeEEEeCCCC-----------------------cEEEEECc
Confidence 5 59999998876543 344554 3588999999999776654311 23444433
Q ss_pred CCCCCCcccccCCCCCCceeeeEecCCCEEEE
Q 004785 289 SSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (730)
Q Consensus 289 s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~ 320 (730)
.+....... +...+++.++|+||++.|+.
T Consensus 386 ~~~~~~~l~---gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 386 AAFAVHPLV---SRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp CTTCCEEEE---ECSSCEEEEECCSSCCBCEE
T ss_pred ccccceeee---cCCCceEEEEeCCCCCeEEE
Confidence 333222111 13346778899999998875
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.86 E-value=3.9e-20 Score=196.79 Aligned_cols=164 Identities=20% Similarity=0.219 Sum_probs=144.0
Q ss_pred cCCCE-EEEEeCCCeEEEEeCCC------CC---------C-------CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 004785 79 DARRG-LASWVEAESLHHLRPKY------CP---------L-------SPPPRSTIAAAFSPDGKTLASTHGDHTVKIID 135 (730)
Q Consensus 79 d~g~~-L~Sgs~DgsIrlWd~~t------~~---------L-------~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWD 135 (730)
..+.. |++++.|+.|++||... .. + ..|...|.+++|+|++ +|++++.|+.|++||
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 46677 99999999999999887 32 2 3488899999999999 999999999999999
Q ss_pred CCCCeEEEEEec---C---CCCcEEEEEccCCCCEEEEEeCC---CcEEEEECCCCeEEEEec--------------CCC
Q 004785 136 CQTGSCLKVLHG---H---RRTPWVVRFHPLNPTIIASGSLD---HEVRLWNASTAECIGSRD--------------FYR 192 (730)
Q Consensus 136 l~tg~~l~~l~g---H---~~~V~sVafSP~dg~lLaSgS~D---gtVrLWDl~tg~~i~~l~--------------h~~ 192 (730)
+++++.+..+.. | ...|.+++|+| ++++|++++.| +.|++||+++++.+..+. |..
T Consensus 214 ~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 214 LSTLRPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp TTTTEEEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred CCCCceeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 999999999999 9 99999999999 89999999999 999999999998887764 788
Q ss_pred CeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEEe------cC---------------CCCeEEEEEccCC
Q 004785 193 PIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVL------RT---------------RRSLRAVHFHPHA 247 (730)
Q Consensus 193 ~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l~------~h---------------~~~V~sVaFSPdG 247 (730)
.|.+++|+|++++|++++.+ .|+|||+++++... .+. .| ...|.+++|+|+|
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT---TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE---EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeE---EEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 99999999999999999954 59999999887644 455 56 8999999999998
No 77
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=5.8e-19 Score=181.22 Aligned_cols=232 Identities=15% Similarity=0.167 Sum_probs=175.7
Q ss_pred CEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 82 RGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
..|+.+ .|++|++||..+++ +.+|...|++++|+|++++|++|+.|++|++||+++++.+..+.+|...+.++
T Consensus 37 ~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~ 115 (318)
T 4ggc_A 37 NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL 115 (318)
T ss_dssp SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEe
Confidence 355554 59999999998873 45788999999999999999999999999999999999999999999988776
Q ss_pred EEccCCCCEEEEEeCCCcEEEEECCCCeEE-EE-ecCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCcccc-CCeEE
Q 004785 156 RFHPLNPTIIASGSLDHEVRLWNASTAECI-GS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETS-SPRIV 231 (730)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~tg~~i-~~-l~h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~-~~~~l 231 (730)
.+ ++.++++++.++.+++|+...+... .. ..|...+..+.|++++++|++++.++ |++||+++++... .....
T Consensus 116 ~~---~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 192 (318)
T 4ggc_A 116 SW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTF 192 (318)
T ss_dssp EE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEE
T ss_pred ec---CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeee
Confidence 66 4589999999999999999876433 33 46889999999999999999999655 9999998876432 23345
Q ss_pred ecCCCCeEEEEEccCCCeEEEEEe--------eCCccCCCcceeEeccCC-----------cc----cCCCCeEEEecCC
Q 004785 232 LRTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSPG-----------YW----RYPPPVICMAGAH 288 (730)
Q Consensus 232 ~~h~~~V~sVaFSPdG~~Llatgs--------vwdl~s~~~~~~l~t~sG-----------~~----~~p~~~V~l~d~~ 288 (730)
..+...|..+.|+|++..++..+. +|+............... +. ......+.+|+..
T Consensus 193 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 193 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp CCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred cccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECC
Confidence 567889999999999887765432 666554443222211110 00 0123467888876
Q ss_pred CCCCCCcccccCCCCCCceeeeEecCCCEEEE
Q 004785 289 SSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (730)
Q Consensus 289 s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~ 320 (730)
++...... .+...++..++|+||++.|+.
T Consensus 273 ~~~~~~~l---~gH~~~V~~l~~spdg~~l~S 301 (318)
T 4ggc_A 273 TMAKVAEL---KGHTSRVLSLTMSPDGATVAS 301 (318)
T ss_dssp TCCEEEEE---CCCSSCEEEEEECTTSSCEEE
T ss_pred CCcEEEEE---cCCCCCEEEEEEcCCCCEEEE
Confidence 65544333 345667888999999999885
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.86 E-value=7.3e-20 Score=212.82 Aligned_cols=180 Identities=19% Similarity=0.194 Sum_probs=152.9
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC-------CCCCCCCCeEEEEECCCC--CEEEEEeCCCeEEEEECCCCeEEEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC-------PLSPPPRSTIAAAFSPDG--KTLASTHGDHTVKIIDCQTGSCLKVL 145 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~-------~L~gH~~~Vt~lafSPDG--~~LaSgS~DgtVrVWDl~tg~~l~~l 145 (730)
++....+..|++++.|++|++||.... ...+|...|.+++|+|++ ..|++++.|++|++||+.+++....+
T Consensus 478 ~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 557 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL 557 (694)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE
Confidence 334457788999999999999997543 235799999999999986 58999999999999999999999999
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccc
Q 004785 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREET 225 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~ 225 (730)
.+|.+.|++++|+| ++++|++++.|++|++||+.+++.+..+.+...|.+++|+|++.+|++++++.|+|||++++...
T Consensus 558 ~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 558 AGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIV 636 (694)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEE
T ss_pred cCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCCh
Confidence 99999999999999 99999999999999999999999998888888999999999999999999999999999987653
Q ss_pred cCCe----------------EEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 226 SSPR----------------IVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 226 ~~~~----------------~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.... ....+...+.+++|+|||++|++++.
T Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 637 EDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp EEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred hhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 3100 00011224789999999998887664
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.86 E-value=5.5e-20 Score=193.12 Aligned_cols=176 Identities=16% Similarity=0.152 Sum_probs=150.5
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeE---EEE
Q 004785 74 FEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC---LKV 144 (730)
Q Consensus 74 l~a~~d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~---l~~ 144 (730)
.++....+..|++++.|+.|++||..++ .+..|...|.+++|+|++++|++++.|+.|++||+..++. ...
T Consensus 57 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~ 136 (372)
T 1k8k_C 57 GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 136 (372)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee
Confidence 3444557889999999999999998776 2478999999999999999999999999999999988762 333
Q ss_pred -EecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECC------------------CCeEEEEe-cCCCCeEEEEEcCCCC
Q 004785 145 -LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS------------------TAECIGSR-DFYRPIASIAFHASGE 204 (730)
Q Consensus 145 -l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~------------------tg~~i~~l-~h~~~V~sVafSPdG~ 204 (730)
...|...|.+++|+| +++++++++.|+.|++||++ +++.+..+ .|...|.+++|+|+++
T Consensus 137 ~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 137 IKKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 215 (372)
T ss_dssp ECTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred eecccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence 367899999999999 89999999999999999954 56777776 5888999999999999
Q ss_pred EEEEEECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004785 205 LLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 205 ~LAsgSdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llat 253 (730)
+|++++.+ .|++||+++++... .+..|...|.+++|+|++++++++
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKMAVA---TLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTTEEE---EEECSSCCEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCceeE---EEccCCCCeEEEEEecCCCEEEEE
Confidence 99999955 59999999887544 667788899999999999866554
No 80
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.86 E-value=3.9e-20 Score=199.42 Aligned_cols=229 Identities=13% Similarity=0.084 Sum_probs=164.2
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC-------------CCCCCCCCeEEEEECCCCCEEEEEe--CCCeEEEEECCCCeEEE
Q 004785 79 DARRGLASWVEAESLHHLRPKYC-------------PLSPPPRSTIAAAFSPDGKTLASTH--GDHTVKIIDCQTGSCLK 143 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~-------------~L~gH~~~Vt~lafSPDG~~LaSgS--~DgtVrVWDl~tg~~l~ 143 (730)
+....|+++..|+.+++|+.... ....+...+.+++|||||++|++++ .|++|+|||+++++++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 34455666677889999987543 1234566799999999999987654 68999999999999998
Q ss_pred EEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE---ecCCCCeEEEEEcCCCCEEEEEE-CC----eEE
Q 004785 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS---RDFYRPIASIAFHASGELLAVAS-GH----KLY 215 (730)
Q Consensus 144 ~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~---l~h~~~V~sVafSPdG~~LAsgS-dd----~I~ 215 (730)
.+. |.+.|.+++|+| +++++++++.| .+++|+..+++.+.. ..|...|.+++|+|+|++|++++ ++ .++
T Consensus 172 ~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp EEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred EeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 886 778899999999 99999999855 577777777766543 24677899999999999999988 33 278
Q ss_pred EEEcCCCcccc-CCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCC
Q 004785 216 IWRYNMREETS-SPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPG 294 (730)
Q Consensus 216 VWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~ 294 (730)
+||+....... ....+..|...|++++|+|||++|++++... .|.+|+..++...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----------------------~V~iwd~~~~~~~- 304 (365)
T 4h5i_A 249 KISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-----------------------SIALVKLKDLSMS- 304 (365)
T ss_dssp EEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----------------------CEEEEETTTTEEE-
T ss_pred ecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----------------------EEEEEECCCCcEE-
Confidence 88887664321 1235667889999999999999777665411 2344443332211
Q ss_pred cccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCC
Q 004785 295 LAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSS 339 (730)
Q Consensus 295 L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss 339 (730)
.....+...++..++|||||++|+-...+. ++-.++++..
T Consensus 305 -~~~~~gH~~~V~~v~fSpdg~~laS~S~D~----tvrvw~ip~~ 344 (365)
T 4h5i_A 305 -KIFKQAHSFAITEVTISPDSTYVASVSAAN----TIHIIKLPLN 344 (365)
T ss_dssp -EEETTSSSSCEEEEEECTTSCEEEEEETTS----EEEEEECCTT
T ss_pred -EEecCcccCCEEEEEECCCCCEEEEEeCCC----eEEEEEcCCC
Confidence 111223445677899999999998643332 4556666543
No 81
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.86 E-value=5.6e-21 Score=200.93 Aligned_cols=176 Identities=18% Similarity=0.215 Sum_probs=144.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCeE---EEEEecC
Q 004785 80 ARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGSC---LKVLHGH 148 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPD--G~~LaSgS~DgtVrVWDl~tg~~---l~~l~gH 148 (730)
.+..|++++.|++|++||..++ .+.+|...|.+++|+|+ +.+|++|+.|++|++||+.++.. ...+.+|
T Consensus 70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h 149 (316)
T 3bg1_A 70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH 149 (316)
T ss_dssp GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS
T ss_pred CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc
Confidence 3689999999999999999875 25689999999999997 88999999999999999987632 3456789
Q ss_pred CCCcEEEEEccCC----------------CCEEEEEeCCCcEEEEECCCC---eEEEEe-cCCCCeEEEEEcCCC----C
Q 004785 149 RRTPWVVRFHPLN----------------PTIIASGSLDHEVRLWNASTA---ECIGSR-DFYRPIASIAFHASG----E 204 (730)
Q Consensus 149 ~~~V~sVafSP~d----------------g~lLaSgS~DgtVrLWDl~tg---~~i~~l-~h~~~V~sVafSPdG----~ 204 (730)
...|.+++|+|+. +.+|++++.|++|++||++++ +.+..+ .|...|.+++|+|++ +
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc
Confidence 9999999999931 468999999999999999765 344444 588999999999987 7
Q ss_pred EEEEEECC-eEEEEEcCCCcc-ccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 205 LLAVASGH-KLYIWRYNMREE-TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 205 ~LAsgSdd-~I~VWDl~t~~~-~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+|++++.+ .|+|||+..... ......+..|...|.+++|+|+|++|++++.
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 89999955 599999976321 1112345678899999999999998887765
No 82
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.86 E-value=4.6e-20 Score=196.22 Aligned_cols=178 Identities=18% Similarity=0.121 Sum_probs=149.5
Q ss_pred CEEEEEeCCCeEEEEeCCCCC---------CCCC-----CCCeEEEEEC----CCCCE-EEEEeCCCeEEEEECCC----
Q 004785 82 RGLASWVEAESLHHLRPKYCP---------LSPP-----PRSTIAAAFS----PDGKT-LASTHGDHTVKIIDCQT---- 138 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~---------L~gH-----~~~Vt~lafS----PDG~~-LaSgS~DgtVrVWDl~t---- 138 (730)
..|++++.|+.|++|+..++. +..| ...|.+++|+ |++++ |++++.|+.|++||+.+
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 899999999999999987543 4567 5899999999 99999 99999999999999988
Q ss_pred --CeEEE-----EEe-------cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec----C---CCCeEEE
Q 004785 139 --GSCLK-----VLH-------GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD----F---YRPIASI 197 (730)
Q Consensus 139 --g~~l~-----~l~-------gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~----h---~~~V~sV 197 (730)
++.+. .+. .|...|.+++|+| ++ ++++++.|+.|++||+++++.+..+. | ...|.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceE
Confidence 66665 774 4899999999999 77 99999999999999999999888765 5 8899999
Q ss_pred EEcCCCCEEEEEECC----eEEEEEcCCCccccCCeEEec-------------CCCCeEEEEEccCCCeEEEEEe-----
Q 004785 198 AFHASGELLAVASGH----KLYIWRYNMREETSSPRIVLR-------------TRRSLRAVHFHPHAAPLLLTAE----- 255 (730)
Q Consensus 198 afSPdG~~LAsgSdd----~I~VWDl~t~~~~~~~~~l~~-------------h~~~V~sVaFSPdG~~Llatgs----- 255 (730)
+|+|++++|++++.+ .|++||+++++... .+.. |...|.+++|+|++++|++++.
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIG---SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCEEE---EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCCcccc---eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 999999999999855 59999999887544 5555 8999999999999998877664
Q ss_pred eCCccCCCc
Q 004785 256 VNDLDSSES 264 (730)
Q Consensus 256 vwdl~s~~~ 264 (730)
+|++.....
T Consensus 317 iwd~~~~~~ 325 (397)
T 1sq9_A 317 FWDVKTKER 325 (397)
T ss_dssp EEETTTTEE
T ss_pred EEEcCCCce
Confidence 666665443
No 83
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.85 E-value=1.4e-20 Score=196.38 Aligned_cols=182 Identities=18% Similarity=0.257 Sum_probs=154.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEE---ecCCCCc
Q 004785 81 RRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVL---HGHRRTP 152 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l---~gH~~~V 152 (730)
+..|++++.|+.|++||..++ .+.+|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+ .+|...|
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 568999999999999999876 3668999999999999 9999999999999999999999999888 7899999
Q ss_pred EEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-----------------------------CCCCeEEEEEcCCC
Q 004785 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-----------------------------FYRPIASIAFHASG 203 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-----------------------------h~~~V~sVafSPdG 203 (730)
.+++|+| +++++++++.|+.|++||+++++....+. |...|.+++|+ +
T Consensus 165 ~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 165 LSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred eEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 9999999 99999999999999999999876543222 88899999999 7
Q ss_pred CEEEEEEC-CeEEEEEcCCCccc-----------cCCeEEecCCCCeEEEEEccC--CCeEEEEEe-----eCCccCCCc
Q 004785 204 ELLAVASG-HKLYIWRYNMREET-----------SSPRIVLRTRRSLRAVHFHPH--AAPLLLTAE-----VNDLDSSES 264 (730)
Q Consensus 204 ~~LAsgSd-d~I~VWDl~t~~~~-----------~~~~~l~~h~~~V~sVaFSPd--G~~Llatgs-----vwdl~s~~~ 264 (730)
++|++++. +.|++||+++.... .....+..|...|.+++|+|+ ++++++++. +|++...+.
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 79999985 55999999876430 112355678889999999999 997777654 788876654
Q ss_pred c
Q 004785 265 S 265 (730)
Q Consensus 265 ~ 265 (730)
.
T Consensus 322 ~ 322 (366)
T 3k26_A 322 H 322 (366)
T ss_dssp G
T ss_pred c
Confidence 4
No 84
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.85 E-value=3.3e-20 Score=200.02 Aligned_cols=178 Identities=16% Similarity=0.178 Sum_probs=141.8
Q ss_pred EEEEecCCCEEE--EEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE--EEe
Q 004785 74 FEAGRDARRGLA--SWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK--VLH 146 (730)
Q Consensus 74 l~a~~d~g~~L~--Sgs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~--~l~ 146 (730)
.++.+.+++.++ +++.|++|++||..+++ ...|...|.+++|+|||++|++++.| .+++|+..+++.+. ...
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~ 216 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDF 216 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCC
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecC
Confidence 344455666665 45578999999998873 22578889999999999999999865 56677777776654 345
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCC----cEEEEECCCCeEEE-----EecCCCCeEEEEEcCCCCEEEEEECCe-EEE
Q 004785 147 GHRRTPWVVRFHPLNPTIIASGSLDH----EVRLWNASTAECIG-----SRDFYRPIASIAFHASGELLAVASGHK-LYI 216 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLaSgS~Dg----tVrLWDl~tg~~i~-----~l~h~~~V~sVafSPdG~~LAsgSdd~-I~V 216 (730)
+|...|.+++|+| ++.++++++.|+ .+++||+....... ...|...|++++|+|||++||+|+.++ |+|
T Consensus 217 ~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 217 DKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp CTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 7888999999999 999999999887 68899988765422 235788999999999999999999654 999
Q ss_pred EEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 217 WRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
||+++++.+. ..+.+|...|++|+|+|||++|++++.
T Consensus 296 wd~~~~~~~~--~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 296 VKLKDLSMSK--IFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp EETTTTEEEE--EETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred EECCCCcEEE--EecCcccCCEEEEEECCCCCEEEEEeC
Confidence 9999987643 224579999999999999998777654
No 85
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.2e-20 Score=196.53 Aligned_cols=171 Identities=12% Similarity=0.058 Sum_probs=138.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCCC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEECC---------CCeEEEEEe-c
Q 004785 80 ARRGLASWVEAESLHHLRPKYCPLSP--PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ---------TGSCLKVLH-G 147 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~L~g--H~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~---------tg~~l~~l~-g 147 (730)
++..+++++.|++|++||..+++... ....|.++.|+|+ +++++.|++|++|+.. +++.+..+. +
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 56789999999999999998764211 1356778888887 9999999999999665 555555554 7
Q ss_pred CCCCcEEEEEcc-CCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCc
Q 004785 148 HRRTPWVVRFHP-LNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMRE 223 (730)
Q Consensus 148 H~~~V~sVafSP-~dg~lLaSgS~DgtVrLWDl~tg~~i~~l--~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~ 223 (730)
|.+.|.+++|+| .+++++++++.|++|++||+++++.+... .+...+.+++|+|+|++|++|+.+ .|+|||+++++
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 778999999998 25689999999999999999999987665 355679999999999999999854 59999999887
Q ss_pred cccCCeEEec-CCCCeEEEEEccCCCeEEEEEe
Q 004785 224 ETSSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 224 ~~~~~~~l~~-h~~~V~sVaFSPdG~~Llatgs 255 (730)
... ..+.. |...|.+++|+|+|.+|++++.
T Consensus 204 ~~~--~~~~~~h~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 204 QAS--SRFPVDEEAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp SCC--EECCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred CCc--cEEeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 531 24555 8999999999999998777663
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1e-19 Score=214.85 Aligned_cols=221 Identities=15% Similarity=0.141 Sum_probs=170.8
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCe--EEEEEec
Q 004785 78 RDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKVLHG 147 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~l~g 147 (730)
...+..|++++.|++|++||.... .+.+|.+.|++++|+++ +++|++|+.||.|++||+.+++ .+..+.+
T Consensus 18 s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~ 97 (753)
T 3jro_A 18 DYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV 97 (753)
T ss_dssp CSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred CCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccC
Confidence 346778999999999999998733 47899999999999997 9999999999999999999987 7788889
Q ss_pred CCCCcEEEEEccCC--CCEEEEEeCCCcEEEEECCCCeE---EEEecCCCCeEEEEEcC-------------CCCEEEEE
Q 004785 148 HRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC---IGSRDFYRPIASIAFHA-------------SGELLAVA 209 (730)
Q Consensus 148 H~~~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~tg~~---i~~l~h~~~V~sVafSP-------------dG~~LAsg 209 (730)
|...|.+++|+| + ++++++++.|++|++||++++.. .....|...|.+++|+| ++++|+++
T Consensus 98 h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 98 HSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp CSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE
T ss_pred CCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE
Confidence 999999999999 6 89999999999999999998732 33346889999999999 58999999
Q ss_pred ECC-eEEEEEcCCCccc-cCCeEEecCCCCeEEEEEccC---CCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEE
Q 004785 210 SGH-KLYIWRYNMREET-SSPRIVLRTRRSLRAVHFHPH---AAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICM 284 (730)
Q Consensus 210 Sdd-~I~VWDl~t~~~~-~~~~~l~~h~~~V~sVaFSPd---G~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l 284 (730)
+.+ .|++||++++... .....+..|...|.+++|+|+ ++++++++... .+.+
T Consensus 177 s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-----------------------~I~i 233 (753)
T 3jro_A 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----------------------TCII 233 (753)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-----------------------CEEE
T ss_pred ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-----------------------EEEE
Confidence 954 5999999887532 112356678999999999999 77666665311 2333
Q ss_pred ecCCCCCCCC--cccccCCCCCCceeeeEecCCCEEEEEe
Q 004785 285 AGAHSSSHPG--LAEEVPLITPPFLRPSFVRDDERISLQH 322 (730)
Q Consensus 285 ~d~~s~d~~~--L~~~~~~~slpil~p~FSpDg~rI~~~~ 322 (730)
|+...+.... ...........+...+|+||++.++...
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 234 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp EEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred ecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 3333221110 1111112233556789999999888743
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.8e-20 Score=200.93 Aligned_cols=195 Identities=11% Similarity=0.104 Sum_probs=153.4
Q ss_pred EEEEec-CCCEEEEEeCCCeEEEEeCCC---C-----CCC-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC---CCe
Q 004785 74 FEAGRD-ARRGLASWVEAESLHHLRPKY---C-----PLS-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ---TGS 140 (730)
Q Consensus 74 l~a~~d-~g~~L~Sgs~DgsIrlWd~~t---~-----~L~-gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~---tg~ 140 (730)
.++... .+..|++++.|++|++||..+ + .+. +|...|++++|+|++++|++++.|++|++||+. +++
T Consensus 68 ~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~ 147 (437)
T 3gre_A 68 SSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQES 147 (437)
T ss_dssp EEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETT
T ss_pred EEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCc
Confidence 344445 678999999999999999865 2 222 689999999999999999999999999999994 565
Q ss_pred EEEEEec------------CCCCcEEEE--EccCCCCEEEEEeCCCcEEEEECCCCeEEEEec---CCCCeEEEEEcCCC
Q 004785 141 CLKVLHG------------HRRTPWVVR--FHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASG 203 (730)
Q Consensus 141 ~l~~l~g------------H~~~V~sVa--fSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~---h~~~V~sVafSPdG 203 (730)
.+..+.+ +...+.++. +++ ++.++++++.|++|++||+++++.+..+. |...|.+++|+|++
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 226 (437)
T 3gre_A 148 EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC 226 (437)
T ss_dssp EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS
T ss_pred eeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC
Confidence 5554433 445566666 456 78999999999999999999999888764 67899999999999
Q ss_pred CEEEEEECCe-EEEEEcCCCccccCCeEE-ecCCCCeEEEEEcc----CCCeEEEEEe-----eCCccCCCcceeEeccC
Q 004785 204 ELLAVASGHK-LYIWRYNMREETSSPRIV-LRTRRSLRAVHFHP----HAAPLLLTAE-----VNDLDSSESSLTLATSP 272 (730)
Q Consensus 204 ~~LAsgSdd~-I~VWDl~t~~~~~~~~~l-~~h~~~V~sVaFSP----dG~~Llatgs-----vwdl~s~~~~~~l~t~s 272 (730)
++|++++.++ |++||+++++... .+ ..|...|.+++|+| ++.++++++. +|++..+.....+..+.
T Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 303 (437)
T 3gre_A 227 CVLILGTTRGIIDIWDIRFNVLIR---SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSD 303 (437)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEE---EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSS
T ss_pred CEEEEEcCCCeEEEEEcCCccEEE---EEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCC
Confidence 9999999655 9999999876533 33 36778999996664 5766666533 88888776666655443
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.85 E-value=9.6e-20 Score=189.42 Aligned_cols=173 Identities=10% Similarity=0.017 Sum_probs=147.0
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEEC-CCCeEEEEEec
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDC-QTGSCLKVLHG 147 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~~-------L~gH~~~Vt~lafSPDG~-~LaSgS~DgtVrVWDl-~tg~~l~~l~g 147 (730)
....+..|++++.|+.|++|+..... +.+|...|++++|+|+++ +|++++.|+.|++||+ .+++. ..+.+
T Consensus 19 ~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~ 97 (342)
T 1yfq_A 19 IIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTN 97 (342)
T ss_dssp EEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBS
T ss_pred EcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-Eeccc
Confidence 34467889999999999999987653 458999999999999999 9999999999999999 87764 77888
Q ss_pred --CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCC---------CeEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEE
Q 004785 148 --HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST---------AECIGSRDFYRPIASIAFHASGELLAVAS-GHKLY 215 (730)
Q Consensus 148 --H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~t---------g~~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~ 215 (730)
|...|.+++|+| ++++++++.|+.|++||+++ ++++..+.+...|.+++|+|++ |++++ ++.|+
T Consensus 98 ~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~ 173 (342)
T 1yfq_A 98 NEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQ 173 (342)
T ss_dssp CCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEE
T ss_pred cCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEE
Confidence 999999999999 78999999999999999988 7777777789999999999988 67776 55699
Q ss_pred EEEcCC-CccccCCeEEecCCCCeEEEEEcc-CCCeEEEEEe
Q 004785 216 IWRYNM-REETSSPRIVLRTRRSLRAVHFHP-HAAPLLLTAE 255 (730)
Q Consensus 216 VWDl~t-~~~~~~~~~l~~h~~~V~sVaFSP-dG~~Llatgs 255 (730)
+||+++ ..... ......|...|.+++|+| +++++++++.
T Consensus 174 i~d~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 174 WFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp EEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred EEECCccccccc-eeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 999988 54321 234556788999999999 9997777664
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.84 E-value=4.7e-19 Score=207.04 Aligned_cols=194 Identities=17% Similarity=0.231 Sum_probs=164.6
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-eEEEEEec
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG-SCLKVLHG 147 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg-~~l~~l~g 147 (730)
...+....+..|++++.|+.|++||..++ .+.+|.+.|++++|+|++++|++++.|++|++||+.++ .....+.+
T Consensus 59 ~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 138 (814)
T 3mkq_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG 138 (814)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC
Confidence 33444567789999999999999999876 36789999999999999999999999999999999987 67788899
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCCeEEEEEcC--CCCEEEEEECC-eEEEEEcCCC
Q 004785 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPIASIAFHA--SGELLAVASGH-KLYIWRYNMR 222 (730)
Q Consensus 148 H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~--h~~~V~sVafSP--dG~~LAsgSdd-~I~VWDl~t~ 222 (730)
|...|.+++|+|.+++++++++.|++|++||+.+++....+. +...+..++|+| ++++|++++.+ .|++||+.++
T Consensus 139 ~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 139 HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 999999999999677899999999999999998877665543 448899999999 99999999955 4999999888
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEe
Q 004785 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLA 269 (730)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~ 269 (730)
+... .+..|...|.+++|+|+++++++++. +|++..+.....+.
T Consensus 219 ~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 219 SCVA---TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp EEEE---EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred cEEE---EEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 7543 66778999999999999998777664 77777655444443
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.84 E-value=6.4e-20 Score=191.13 Aligned_cols=169 Identities=10% Similarity=0.133 Sum_probs=140.8
Q ss_pred CEEEEEeC---CCeEEEEeCCCCC-----CCCCCCCeEEEEECCC---CCEEEEEeCCCeEEEEECCCCe-EEEEEecCC
Q 004785 82 RGLASWVE---AESLHHLRPKYCP-----LSPPPRSTIAAAFSPD---GKTLASTHGDHTVKIIDCQTGS-CLKVLHGHR 149 (730)
Q Consensus 82 ~~L~Sgs~---DgsIrlWd~~t~~-----L~gH~~~Vt~lafSPD---G~~LaSgS~DgtVrVWDl~tg~-~l~~l~gH~ 149 (730)
..+++++. |+.|++||..++. ..+|...|.+++|+|+ +++|++++.|+.|++||+.+++ .+..+.+|.
T Consensus 32 ~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 111 (357)
T 3i2n_A 32 KFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHK 111 (357)
T ss_dssp EEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCS
T ss_pred eEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecc
Confidence 45556665 9999999998763 2379999999999998 7999999999999999999988 889999999
Q ss_pred CCcEEEEE------ccCCCCEEEEEeCCCcEEEEECCCCe-EEEEec-C----CCCeEEEE----EcCCCCEEEEEECC-
Q 004785 150 RTPWVVRF------HPLNPTIIASGSLDHEVRLWNASTAE-CIGSRD-F----YRPIASIA----FHASGELLAVASGH- 212 (730)
Q Consensus 150 ~~V~sVaf------SP~dg~lLaSgS~DgtVrLWDl~tg~-~i~~l~-h----~~~V~sVa----fSPdG~~LAsgSdd- 212 (730)
..|.++.| +| +++++++++.|++|++||+.+++ .+..+. + ...+.+++ |+|++++|++++.+
T Consensus 112 ~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~ 190 (357)
T 3i2n_A 112 EIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG 190 (357)
T ss_dssp SCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS
T ss_pred cceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC
Confidence 99999965 67 88999999999999999999886 555543 2 33788998 78999999999964
Q ss_pred eEEEEEcCCCccccCCeEEecCCCCeEEEEEcc---CCCeEEEEEe
Q 004785 213 KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHP---HAAPLLLTAE 255 (730)
Q Consensus 213 ~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSP---dG~~Llatgs 255 (730)
.|++||+++++.. ....|...|.+++|+| ++.++++++.
T Consensus 191 ~i~i~d~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 232 (357)
T 3i2n_A 191 DIKLFDLRNMALR----WETNIKNGVCSLEFDRKDISMNKLVATSL 232 (357)
T ss_dssp EEEEEETTTTEEE----EEEECSSCEEEEEESCSSSSCCEEEEEES
T ss_pred eEEEEECccCcee----eecCCCCceEEEEcCCCCCCCCEEEEECC
Confidence 5999999988752 3567889999999999 8998777654
No 91
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=4.1e-20 Score=195.71 Aligned_cols=170 Identities=11% Similarity=0.008 Sum_probs=137.5
Q ss_pred EEEEeCCCeEEEEeCC---------CCC-----CCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCeEEEEEe-
Q 004785 84 LASWVEAESLHHLRPK---------YCP-----LSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGSCLKVLH- 146 (730)
Q Consensus 84 L~Sgs~DgsIrlWd~~---------t~~-----L~gH~~~Vt~lafSP--DG~~LaSgS~DgtVrVWDl~tg~~l~~l~- 146 (730)
+++++.|++|++|+.. +.. ..+|.+.|.+++|+| ++++|++++.|++|++||+++++.+..+.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 8889999999999765 332 236668999999999 99999999999999999999999877764
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE-EEe-c-CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCc
Q 004785 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI-GSR-D-FYRPIASIAFHASGELLAVASGHKLYIWRYNMRE 223 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i-~~l-~-h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~ 223 (730)
.|...|.+++|+| ++.++++|+.|+.|++||+++++.+ ..+ . |...|.+++|+|+|++|++++++.|++||+++.+
T Consensus 168 ~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 168 KSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp CSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 4556899999999 9999999999999999999998876 444 3 7899999999999999999998899999999887
Q ss_pred cccCCeEEecCCCCe--EEEEEccCCCeEEEEE
Q 004785 224 ETSSPRIVLRTRRSL--RAVHFHPHAAPLLLTA 254 (730)
Q Consensus 224 ~~~~~~~l~~h~~~V--~sVaFSPdG~~Llatg 254 (730)
.......+..|...+ .+++|+|+|+++++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 247 GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp TCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred cceeecccccccccccceEEEECCCCCEEEEec
Confidence 543222222233333 4699999999888754
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.84 E-value=2e-19 Score=191.86 Aligned_cols=144 Identities=13% Similarity=0.118 Sum_probs=129.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~ 153 (730)
++..|++++.|+.|++||+.... ..+|...|.+++|+|++++|++++.|+.|++||+ +++.+..+.+|...|.
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVT 208 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEE
Confidence 56889999999999999998652 2355688999999999999999999999999999 6788999999999999
Q ss_pred EEEEccCCCC-EEEEEeCCCcEEEEECCC----CeEEEEecCCCCeEEEEEcC-CCCEEEEEEC-CeEEEEEcCCCccc
Q 004785 154 VVRFHPLNPT-IIASGSLDHEVRLWNAST----AECIGSRDFYRPIASIAFHA-SGELLAVASG-HKLYIWRYNMREET 225 (730)
Q Consensus 154 sVafSP~dg~-lLaSgS~DgtVrLWDl~t----g~~i~~l~h~~~V~sVafSP-dG~~LAsgSd-d~I~VWDl~t~~~~ 225 (730)
+++|+| ++. ++++++.|++|++||+++ ++.+..+.|...|.+++|+| +|++|++++. +.|++||+++++..
T Consensus 209 ~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 209 HAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred EEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 999999 666 999999999999999998 67788788999999999999 9999999995 55999999887653
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.84 E-value=7.1e-20 Score=197.93 Aligned_cols=232 Identities=11% Similarity=0.146 Sum_probs=167.1
Q ss_pred CEEEEEeCCCeEEEEeCCCCC--------------------------------------------CCCCCCCeEEEEECC
Q 004785 82 RGLASWVEAESLHHLRPKYCP--------------------------------------------LSPPPRSTIAAAFSP 117 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~--------------------------------------------L~gH~~~Vt~lafSP 117 (730)
..|++++.|++|++||...+. +.+|...|++++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 689999999999999986521 368999999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCC-CeEEEE-------EecCCCCcEEEEEccCCC-CEEEEEeCCCcEEEEECCCCeE----
Q 004785 118 DGKTLASTHGDHTVKIIDCQT-GSCLKV-------LHGHRRTPWVVRFHPLNP-TIIASGSLDHEVRLWNASTAEC---- 184 (730)
Q Consensus 118 DG~~LaSgS~DgtVrVWDl~t-g~~l~~-------l~gH~~~V~sVafSP~dg-~lLaSgS~DgtVrLWDl~tg~~---- 184 (730)
++++|++| .|+.|++||+.+ ++.+.. +.+|...|.+++|+| ++ ++|++++.|++|++||+++++.
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 99999998 899999999984 444442 568999999999999 65 9999999999999999999886
Q ss_pred EEEec-CCC------------CeEEEEEcCCCCEEEEEECCeEEEEEcCC-CccccCCeEEecCCCC-------------
Q 004785 185 IGSRD-FYR------------PIASIAFHASGELLAVASGHKLYIWRYNM-REETSSPRIVLRTRRS------------- 237 (730)
Q Consensus 185 i~~l~-h~~------------~V~sVafSPdG~~LAsgSdd~I~VWDl~t-~~~~~~~~~l~~h~~~------------- 237 (730)
+..+. +.. .|.+++|+|+|++|++++++.|+|||+++ ++... .+..|...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVE---TYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSC---CEESCGGGTTTHHHHHHTSGG
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccc---eeecccccccccccccccccc
Confidence 45554 443 89999999999999999996699999987 54332 44455321
Q ss_pred --eEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc----CCCCeEEEecCCCCCCCCcccccCCCCCCc
Q 004785 238 --LRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR----YPPPVICMAGAHSSSHPGLAEEVPLITPPF 306 (730)
Q Consensus 238 --V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~----~p~~~V~l~d~~s~d~~~L~~~~~~~slpi 306 (730)
+..++|+|++++|++++. +|++..++.. .+.......+ .....+... .......+.........++
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i 419 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCAS--GKRKKDEISVDSLDFNKKI 419 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECS--SCCCTTCEEGGGCCTTSCC
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCcccccc--CCcccccccccccccCCce
Confidence 334999999998876654 7887765543 2222211111 011111111 1111122222233344567
Q ss_pred eeeeEecCCCEEEEE
Q 004785 307 LRPSFVRDDERISLQ 321 (730)
Q Consensus 307 l~p~FSpDg~rI~~~ 321 (730)
+.++|+|++..|++.
T Consensus 420 ~~~~~~p~~~~la~~ 434 (447)
T 3dw8_B 420 LHTAWHPKENIIAVA 434 (447)
T ss_dssp CEEEECSSSSEEEEE
T ss_pred eEEEECCCCCEEEEE
Confidence 789999999999874
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=1.2e-18 Score=190.38 Aligned_cols=228 Identities=14% Similarity=0.221 Sum_probs=177.2
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
.+..|++++.|++|++||..++ .+.+|.+.|.+++|+ +++|++|+.|++|++||+.+++.+..+.+|...|.++
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM 205 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEE
Confidence 4789999999999999999876 478999999999997 6799999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEEec
Q 004785 156 RFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l~~ 233 (730)
.|++ +.+++++.|++|++||+.+++.+..+ .|...|.+++| ++++|++++.+ .|++||+++++... .+..
T Consensus 206 ~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~ 277 (445)
T 2ovr_B 206 HLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH---TLQG 277 (445)
T ss_dssp EEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEE---EECC
T ss_pred EecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeE---EecC
Confidence 9964 78999999999999999999988776 48889999999 78889999855 49999999887544 5677
Q ss_pred CCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCccc------------CCCCeEEEecCCCCCCCCcc
Q 004785 234 TRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR------------YPPPVICMAGAHSSSHPGLA 296 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~------------~p~~~V~l~d~~s~d~~~L~ 296 (730)
|...|.++.| ++.++++++. +|++..+.....+..+.+... .....+.+|+..++......
T Consensus 278 ~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 278 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 8999999999 7887777664 788877665555443322211 01345677776655443333
Q ss_pred cccCCCCCCceeeeEecCCCEEEEE
Q 004785 297 EEVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 297 ~~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
........++....| +++.++..
T Consensus 356 ~~~~~~~~~v~~~~~--~~~~l~s~ 378 (445)
T 2ovr_B 356 QGPNKHQSAVTCLQF--NKNFVITS 378 (445)
T ss_dssp CSTTSCSSCEEEEEE--CSSEEEEE
T ss_pred ccCCCCCCCEEEEEE--CCCEEEEE
Confidence 332223444555555 45666653
No 95
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.84 E-value=1.1e-19 Score=192.59 Aligned_cols=212 Identities=17% Similarity=0.208 Sum_probs=160.1
Q ss_pred eEEEEeCCCC----CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEEe-------------cCCCCcE
Q 004785 92 SLHHLRPKYC----PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLH-------------GHRRTPW 153 (730)
Q Consensus 92 sIrlWd~~t~----~L~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~-------------gH~~~V~ 153 (730)
.+++|+.+.. .+.+|.+.|++++|+| ++++|++++.|+.|++||+.+++....+. +|...|.
T Consensus 24 ~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 103 (408)
T 4a11_B 24 TRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE 103 (408)
T ss_dssp HHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE
T ss_pred cceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE
Confidence 4455555433 3678999999999999 99999999999999999999876554442 5999999
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCC---CEEEEEECC-eEEEEEcCCCccccCCe
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASG---ELLAVASGH-KLYIWRYNMREETSSPR 229 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG---~~LAsgSdd-~I~VWDl~t~~~~~~~~ 229 (730)
+++|+|+++.++++++.|+.|++||+.+++.+..+.+...+.++.|+|.+ .+|++++.+ .|++||+++++.. .
T Consensus 104 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~ 180 (408)
T 4a11_B 104 TVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS---H 180 (408)
T ss_dssp EEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC---E
T ss_pred EEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee---e
Confidence 99999977889999999999999999999999999999999999999954 489998855 5999999987653 3
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe------eCCccCCCcce-eEeccCCcccCCCCeEEEecCCCCCCCCcccccCCC
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSL-TLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLI 302 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llatgs------vwdl~s~~~~~-~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~ 302 (730)
.+..|...|.+++|+|+++++++++. +|+++...... .+....+. ............
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 244 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGK----------------KSQAVESANTAH 244 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTC----------------SCCCTTTSSCSC
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccc----------------cceeeccccccc
Confidence 67789999999999999997555543 55655433211 11111000 011111112233
Q ss_pred CCCceeeeEecCCCEEEEEe
Q 004785 303 TPPFLRPSFVRDDERISLQH 322 (730)
Q Consensus 303 slpil~p~FSpDg~rI~~~~ 322 (730)
..++..+.|+||++.++...
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEE
T ss_pred cCceeEEEEcCCCCEEEEec
Confidence 45667899999999998743
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.84 E-value=8e-19 Score=215.69 Aligned_cols=179 Identities=18% Similarity=0.261 Sum_probs=154.5
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEECCCCeEEEEEe
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSP--DG~~LaSgS~DgtVrVWDl~tg~~l~~l~ 146 (730)
...+...++..|++++.|++|++||..++ .+.+|...|.+++|+| ++.++++++.|+.|++||+.+++++..+.
T Consensus 661 ~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~ 740 (1249)
T 3sfz_A 661 LCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF 740 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred EEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence 33445567889999999999999999887 3678999999999999 55689999999999999999999999999
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe--------------------------------------
Q 004785 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-------------------------------------- 188 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-------------------------------------- 188 (730)
+|.+.|.+++|+| +++++++++.|++|++||+.+++....+
T Consensus 741 ~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 741 GHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 819 (1249)
T ss_dssp CCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT
T ss_pred CCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC
Confidence 9999999999999 9999999999999999999877543322
Q ss_pred ------------------cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCe
Q 004785 189 ------------------DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAP 249 (730)
Q Consensus 189 ------------------~h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~ 249 (730)
.|...|.+++|+|+++++++++.++ |++||+.++.... .+.+|...|.+++|+|+|++
T Consensus 820 ~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~---~~~~h~~~v~~v~~spdg~~ 896 (1249)
T 3sfz_A 820 KVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVA---DCRGHLSWVHGVMFSPDGSS 896 (1249)
T ss_dssp EEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEE---EECCCSSCEEEEEECTTSSE
T ss_pred cEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceee---ecCCCccceEEEEECCCCCE
Confidence 3556788899999999999988544 9999998876543 67789999999999999998
Q ss_pred EEEEEe
Q 004785 250 LLLTAE 255 (730)
Q Consensus 250 Llatgs 255 (730)
+++++.
T Consensus 897 l~s~s~ 902 (1249)
T 3sfz_A 897 FLTASD 902 (1249)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 887765
No 97
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.84 E-value=1.1e-18 Score=190.18 Aligned_cols=155 Identities=21% Similarity=0.390 Sum_probs=133.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe----EEEEEecCCCCcEEEEEccCCCCEEEEE--eCCCcEEE
Q 004785 103 LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS----CLKVLHGHRRTPWVVRFHPLNPTIIASG--SLDHEVRL 176 (730)
Q Consensus 103 L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~----~l~~l~gH~~~V~sVafSP~dg~lLaSg--S~DgtVrL 176 (730)
+.+|...+..+.|+|++++|++++.|+.|++||..+++ .+..+..|.+.|.+++|+|.+..+++++ +.|++|++
T Consensus 226 ~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~i 305 (420)
T 4gga_A 226 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 305 (420)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEE
T ss_pred ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEE
Confidence 35788889999999999999999999999999998765 3567788999999999999778888764 57999999
Q ss_pred EECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE---CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004785 177 WNASTAECIGSRDFYRPIASIAFHASGELLAVAS---GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 177 WDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS---dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llat 253 (730)
||+.+++++..+.+...+.++.|+|+++.|++++ ++.|+|||+.+++.+. .+.+|...|++++|+|||++|+++
T Consensus 306 wd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~---~l~gH~~~V~~l~~spdg~~l~S~ 382 (420)
T 4gga_A 306 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA---ELKGHTSRVLSLTMSPDGATVASA 382 (420)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSCEEEE
T ss_pred EeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE---EEcCCCCCEEEEEEcCCCCEEEEE
Confidence 9999999999998889999999999999988876 3559999999987654 678899999999999999988877
Q ss_pred Ee-----eCCcc
Q 004785 254 AE-----VNDLD 260 (730)
Q Consensus 254 gs-----vwdl~ 260 (730)
+. +|++.
T Consensus 383 s~D~tvriWdv~ 394 (420)
T 4gga_A 383 AADETLRLWRCF 394 (420)
T ss_dssp ETTTEEEEECCS
T ss_pred ecCCeEEEEECC
Confidence 64 55554
No 98
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.83 E-value=6.7e-19 Score=192.46 Aligned_cols=181 Identities=15% Similarity=0.286 Sum_probs=153.7
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEE
Q 004785 79 DARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~s 154 (730)
-++..+++++.|++|++||..++ .+.+|...|.+++| ++++|++|+.|++|++||+.+++.+..+.+|...|.+
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 218 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 218 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEE
Confidence 36789999999999999999876 47799999999999 7899999999999999999999999999999999999
Q ss_pred EEEccCCCCEEEEEeCCCcEEEEECCCCeEE---EE-ecCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCe
Q 004785 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECI---GS-RDFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPR 229 (730)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~i---~~-l~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~ 229 (730)
++|++ +++++++.|++|++||+.+++.. .. ..|...|.+++| ++++|++++.+ .|++||+++++...
T Consensus 219 l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~--- 290 (435)
T 1p22_A 219 LRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVR--- 290 (435)
T ss_dssp EECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEE---
T ss_pred EEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEE---
Confidence 99975 59999999999999999987654 22 458889999999 78899999955 59999999887644
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEecc
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATS 271 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~ 271 (730)
.+..|...|.++.|+ ++++++++. +|++..+.....+..+
T Consensus 291 ~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h 335 (435)
T 1p22_A 291 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH 335 (435)
T ss_dssp EEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCC
Confidence 677899999999994 666666654 7888776655555433
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=2.2e-18 Score=188.40 Aligned_cols=245 Identities=14% Similarity=0.161 Sum_probs=190.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVa 156 (730)
+..+++++.|++|++||..++ .+.+|...|.++.|+ ++.|++++.|++|++||+.+++.+..+.+|...|.+++
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ 246 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEE
Confidence 678999999999999999876 477999999999995 67899999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeEEecC
Q 004785 157 FHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRIVLRT 234 (730)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t~~~~~~~~~l~~h 234 (730)
| +++++++++.|+.|++||+++++.+..+. |...|.++.| ++++|++++. +.|++||+++++... .+..|
T Consensus 247 ~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~ 318 (445)
T 2ovr_B 247 Y---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIH---TLTGH 318 (445)
T ss_dssp E---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEE---EECCC
T ss_pred E---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEE---EEcCC
Confidence 9 56889999999999999999999888875 8889999999 7899999995 559999999887644 56778
Q ss_pred CCCeEEEEEccCCCeEEEEEe-----eCCccCCCcceeEeccCCcccC---------------CCCeEEEecCCCCCCCC
Q 004785 235 RRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRY---------------PPPVICMAGAHSSSHPG 294 (730)
Q Consensus 235 ~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~~~~~l~t~sG~~~~---------------p~~~V~l~d~~s~d~~~ 294 (730)
...+.++.++ ++++++++. +|++..+.....+....++... ....+.+|+..++....
T Consensus 319 ~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 319 QSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp CSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceee
Confidence 8889888874 566666654 7888776665555543222110 13457778876665433
Q ss_pred ccc--ccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecC
Q 004785 295 LAE--EVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLR 337 (730)
Q Consensus 295 L~~--~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ 337 (730)
... .......+++.+.|+||+..+++...+......+..++.+
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred eeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 331 1122344567899999998888866555444455555554
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.1e-18 Score=176.22 Aligned_cols=171 Identities=12% Similarity=0.142 Sum_probs=144.8
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC-------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYC-------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~-------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l 145 (730)
..++....+..|++++.|+.|++|++... .+.+|...|.++.| ++++|++++.|+.|++|| .++.+..+
T Consensus 63 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~ 138 (313)
T 3odt_A 63 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL 138 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec
Confidence 33444567889999999999999998653 36789999999999 688999999999999999 78888999
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCC
Q 004785 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMR 222 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~--h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~ 222 (730)
..|...|.++.|+|.+++++++++.|+.|++||. ++....+. +...+.+++|+|+++ |++++ ++.|++||++++
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 9999999999999878899999999999999994 44444443 888999999999999 66777 555999999988
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
+... .+..|...|.+++|+|++. +++++
T Consensus 216 ~~~~---~~~~~~~~i~~~~~~~~~~-l~~~~ 243 (313)
T 3odt_A 216 DVLR---TYEGHESFVYCIKLLPNGD-IVSCG 243 (313)
T ss_dssp CEEE---EEECCSSCEEEEEECTTSC-EEEEE
T ss_pred hhhh---hhhcCCceEEEEEEecCCC-EEEEe
Confidence 7644 6677999999999999994 66554
No 101
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=7.9e-19 Score=192.86 Aligned_cols=232 Identities=14% Similarity=0.118 Sum_probs=172.9
Q ss_pred CCEEEEEeCC------CeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEECCCCeEEEEEecC
Q 004785 81 RRGLASWVEA------ESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDH---TVKIIDCQTGSCLKVLHGH 148 (730)
Q Consensus 81 g~~L~Sgs~D------gsIrlWd~~t~---~L~gH~~~Vt~lafSPDG~~LaSgS~Dg---tVrVWDl~tg~~l~~l~gH 148 (730)
+..++..+.+ +.|++||.+.. .+.+|...|.+++|+|||++|++++.|+ .|++||+.+++.. .+..|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 4556655554 79999998754 3668999999999999999999999875 9999999999865 56778
Q ss_pred CCCcEEEEEccCCCCEEE-EEeCCCc--EEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEEC-C---eEEEEEcCC
Q 004785 149 RRTPWVVRFHPLNPTIIA-SGSLDHE--VRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-H---KLYIWRYNM 221 (730)
Q Consensus 149 ~~~V~sVafSP~dg~lLa-SgS~Dgt--VrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSd-d---~I~VWDl~t 221 (730)
.+.+.+++|+| +++.|+ +++.|+. |++||+.+++......+...+.+++|+|||++|+++++ + .|++||+.+
T Consensus 222 ~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 222 PRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 88999999999 777665 7776665 99999999988766678889999999999999998884 3 388889887
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCC
Q 004785 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPL 301 (730)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~ 301 (730)
++. ..+..+...+..++|+|||++|++++.... ...+.+++..++....+...
T Consensus 301 ~~~----~~l~~~~~~~~~~~~spdG~~l~~~~~~~g--------------------~~~i~~~d~~~~~~~~l~~~--- 353 (415)
T 2hqs_A 301 GAP----QRITWEGSQNQDADVSSDGKFMVMVSSNGG--------------------QQHIAKQDLATGGVQVLSST--- 353 (415)
T ss_dssp SCC----EECCCSSSEEEEEEECTTSSEEEEEEECSS--------------------CEEEEEEETTTCCEEECCCS---
T ss_pred CCE----EEEecCCCcccCeEECCCCCEEEEEECcCC--------------------ceEEEEEECCCCCEEEecCC---
Confidence 653 234456678899999999998887764311 02466666555443222211
Q ss_pred CCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCCcceee
Q 004785 302 ITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRL 344 (730)
Q Consensus 302 ~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~~~~l 344 (730)
. ....+.|+|||+.|++...+.. ...++.+++++....+|
T Consensus 354 -~-~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 354 -F-LDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTDGRFKARL 393 (415)
T ss_dssp -S-SCEEEEECTTSSEEEEEEEETT-EEEEEEEETTSCCEEEC
T ss_pred -C-CcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECCCCcEEEe
Confidence 1 4568999999999998654332 23566666665544444
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.83 E-value=5.6e-20 Score=210.27 Aligned_cols=230 Identities=10% Similarity=0.022 Sum_probs=168.6
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEeCCCC--CCCCCCC-----CeEEEEECCCCCEEEEEeCCCeEEEEECCCCe----
Q 004785 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC--PLSPPPR-----STIAAAFSPDGKTLASTHGDHTVKIIDCQTGS---- 140 (730)
Q Consensus 72 ~ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~--~L~gH~~-----~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~---- 140 (730)
....+.+.++..|++++.|+.|++||.+.. .+. |.. .|.+++|||||++||+|+.||+|+|||+.+++
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 444555678899999999999999996543 345 554 59999999999999999999999999999885
Q ss_pred ---EEEEE----ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE---EEe--cCCCCeEEEEEcCCCCEEEE
Q 004785 141 ---CLKVL----HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI---GSR--DFYRPIASIAFHASGELLAV 208 (730)
Q Consensus 141 ---~l~~l----~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i---~~l--~h~~~V~sVafSPdG~~LAs 208 (730)
.+..+ .+|...|.+++|+| ++ +++++.|++|++||+.+++.. ..+ .|...|.+++|+ |+.||+
T Consensus 167 ~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LAS 241 (588)
T 2j04_A 167 EFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVL 241 (588)
T ss_dssp CCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEE
T ss_pred cceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEE
Confidence 36776 67778999999999 66 888899999999999987742 344 477899999999 689999
Q ss_pred EECCeEEEEEcCCCccccCCeEEecCCCCeEEEEE--ccCCCeEEEEEe----eCCccCCCcceeEeccCCccc-CCCCe
Q 004785 209 ASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHF--HPHAAPLLLTAE----VNDLDSSESSLTLATSPGYWR-YPPPV 281 (730)
Q Consensus 209 gSdd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaF--SPdG~~Llatgs----vwdl~s~~~~~~l~t~sG~~~-~p~~~ 281 (730)
+++++|++||+..+.... ...+|...|..+.| +||+..++++.+ +|..+. .. ....+... .....
T Consensus 242 a~~~tIkLWd~~~~~~~~---~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~d~----~~-~spd~~l~a~~d~~ 313 (588)
T 2j04_A 242 TCPGYVHKIDLKNYSISS---LKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLEDE----LH-VTADNIIAPYLEKK 313 (588)
T ss_dssp ECSSEEEEEETTTTEEEE---EECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEESSS----EE-EECCCSSHHHHHHH
T ss_pred EeCCeEEEEECCCCeEEE---EEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEeecc----EE-ECCCceEEEEcCCE
Confidence 998889999998876522 34489999999999 999987666542 555441 11 11111100 01123
Q ss_pred EEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEE
Q 004785 282 ICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (730)
Q Consensus 282 V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~ 320 (730)
+.+|+..... ..... ....+..++|||||+.+++
T Consensus 314 v~lW~~~g~~-l~~~~----~~~~I~~va~SPdG~~lA~ 347 (588)
T 2j04_A 314 FKKWSTIWNE-FNNYE----TTLVIHGISLSPDGYSIAI 347 (588)
T ss_dssp HHHTTTTTTS-SSSSC----CEEEEEEEEECTTSSEEEE
T ss_pred EEEEECCCCc-eeeec----cceEEEEEEECCCCCEEEE
Confidence 4556533222 11111 1223447999999999997
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=6.9e-19 Score=193.50 Aligned_cols=161 Identities=11% Similarity=0.115 Sum_probs=135.7
Q ss_pred CCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECC--CCeEEEEEe--cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEEC
Q 004785 105 PPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQ--TGSCLKVLH--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA 179 (730)
Q Consensus 105 gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~--tg~~l~~l~--gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl 179 (730)
+|.+.|.+++|+|++++| ++++.|+.|+|||+. +++.+..+. .|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCEEEEEeCCCcEEEEec
Confidence 455689999999999996 899999999999999 888888886 5678899999999 9999999999999999999
Q ss_pred CCCeEEE----E-ecCCCCeEEEEEcCC---CCEEEEEECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeE
Q 004785 180 STAECIG----S-RDFYRPIASIAFHAS---GELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPL 250 (730)
Q Consensus 180 ~tg~~i~----~-l~h~~~V~sVafSPd---G~~LAsgSdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~L 250 (730)
.+++... . ..|...|.+++|+|+ +++|++++.+ .|++||+++++... ....+|...|.+++|+ ++++|
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD--KWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE--EECCCCSSCEEEEEEC-STTEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee--eeecCCCCceEEEEEC-CCCEE
Confidence 9877553 3 458899999999999 9999999955 59999999876533 1245799999999999 99988
Q ss_pred EEEEe-----eCCccCCCcceeEe
Q 004785 251 LLTAE-----VNDLDSSESSLTLA 269 (730)
Q Consensus 251 latgs-----vwdl~s~~~~~~l~ 269 (730)
++++. +|++..++....+.
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeeeec
Confidence 87664 88888776555443
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.82 E-value=5.3e-19 Score=183.81 Aligned_cols=176 Identities=10% Similarity=0.048 Sum_probs=144.7
Q ss_pred EEEecCCC-EEEEEeCCCeEEEEeC-CCC---CCCC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC---------
Q 004785 75 EAGRDARR-GLASWVEAESLHHLRP-KYC---PLSP--PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT--------- 138 (730)
Q Consensus 75 ~a~~d~g~-~L~Sgs~DgsIrlWd~-~t~---~L~g--H~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~t--------- 138 (730)
++....+. .|++++.|+.|++||. .++ .+.+ |...|.+++|+| +++|++++.|+.|++||+.+
T Consensus 62 ~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 140 (342)
T 1yfq_A 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVK 140 (342)
T ss_dssp EEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEE
T ss_pred EEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccccc
Confidence 33444677 8999999999999999 776 4677 999999999999 99999999999999999987
Q ss_pred CeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCC-CeEE---EEecCCCCeEEEEEcC-CCCEEEEEECC-
Q 004785 139 GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECI---GSRDFYRPIASIAFHA-SGELLAVASGH- 212 (730)
Q Consensus 139 g~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~t-g~~i---~~l~h~~~V~sVafSP-dG~~LAsgSdd- 212 (730)
++++..+. |...|.+++|+| +. +++++.|+.|++||+++ +... ....+...+.+++|+| ++++|++++.+
T Consensus 141 ~~~~~~~~-~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg 216 (342)
T 1yfq_A 141 NLNSNNTK-VKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG 216 (342)
T ss_dssp ESCSSSSS-SCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred CCeeeEEe-eCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC
Confidence 76666666 889999999998 44 99999999999999998 5432 3345788999999999 99999999955
Q ss_pred eEEEEEcCCC--cc-ccCCeEEecCCC---------CeEEEEEccCCCeEEEEEe
Q 004785 213 KLYIWRYNMR--EE-TSSPRIVLRTRR---------SLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 213 ~I~VWDl~t~--~~-~~~~~~l~~h~~---------~V~sVaFSPdG~~Llatgs 255 (730)
.|++||++.. .. ......+..|.. .|.+++|+|+++++++++.
T Consensus 217 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 271 (342)
T 1yfq_A 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271 (342)
T ss_dssp EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET
T ss_pred cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC
Confidence 5999999876 10 012345556654 9999999999998877664
No 105
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.2e-19 Score=193.60 Aligned_cols=197 Identities=13% Similarity=0.109 Sum_probs=156.9
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCC---CCC--------------CCC--CCCCeEEEE--ECCCCCEEEEEeCCCeE
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPK---YCP--------------LSP--PPRSTIAAA--FSPDGKTLASTHGDHTV 131 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~---t~~--------------L~g--H~~~Vt~la--fSPDG~~LaSgS~DgtV 131 (730)
..++....+..|++++.|++|++||+. .++ +.. +...+.++. +++++.+|++++.|+.|
T Consensus 115 ~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i 194 (437)
T 3gre_A 115 TQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRV 194 (437)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeE
Confidence 334445578899999999999999984 221 112 667788888 66899999999999999
Q ss_pred EEEECCCCeEEEEEec--CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCCeEEEEEc----CCC
Q 004785 132 KIIDCQTGSCLKVLHG--HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFH----ASG 203 (730)
Q Consensus 132 rVWDl~tg~~l~~l~g--H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l--~h~~~V~sVafS----PdG 203 (730)
++||+++++.+..+.+ |.+.|.+++|+| +++++++++.|++|++||+++++++..+ .+...|.+++|+ |++
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~ 273 (437)
T 3gre_A 195 IIFDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS 273 (437)
T ss_dssp EEEETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE
T ss_pred EEEeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc
Confidence 9999999999999998 899999999999 8999999999999999999999998876 577789999665 467
Q ss_pred CEEEEEECCe-EEEEEcCCCccccCCe---------------------EEec--CCCCeEEEEEccCCCeEEEEEe----
Q 004785 204 ELLAVASGHK-LYIWRYNMREETSSPR---------------------IVLR--TRRSLRAVHFHPHAAPLLLTAE---- 255 (730)
Q Consensus 204 ~~LAsgSdd~-I~VWDl~t~~~~~~~~---------------------~l~~--h~~~V~sVaFSPdG~~Llatgs---- 255 (730)
++|++++.++ |+|||+++++...... .+.+ |...|++++|+ +++++++++.
T Consensus 274 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i 352 (437)
T 3gre_A 274 VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSI 352 (437)
T ss_dssp EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence 8999999665 9999999876433100 0111 56678999999 7776666553
Q ss_pred -eCCccCCCcceeEecc
Q 004785 256 -VNDLDSSESSLTLATS 271 (730)
Q Consensus 256 -vwdl~s~~~~~~l~t~ 271 (730)
+|++..++....+..+
T Consensus 353 ~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 353 VMFSLNELSSSKAVISP 369 (437)
T ss_dssp EEEETTCGGGCEEEECC
T ss_pred EEEECCCcccceEEecc
Confidence 8888877776666654
No 106
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.82 E-value=5.7e-19 Score=193.55 Aligned_cols=175 Identities=16% Similarity=0.208 Sum_probs=144.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCC---eEEEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTG---SCLKVL 145 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~-----------~L~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg---~~l~~l 145 (730)
...|++++.|++|++|++... .+.+|...|.+++|+| ++.+|++++.|+.|++||++++ +.+..+
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 338999999999999999762 2568999999999999 7889999999999999999987 577888
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCC-CeEEEEe-cCCCCeEEEEEcCCCC-EEEEEEC-CeEEEEEcCC
Q 004785 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECIGSR-DFYRPIASIAFHASGE-LLAVASG-HKLYIWRYNM 221 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~t-g~~i~~l-~h~~~V~sVafSPdG~-~LAsgSd-d~I~VWDl~t 221 (730)
..|...|.+++|+|++..++++++.|++|++||+++ ++.+..+ .|...|.+++|+|+++ +|++++. +.|+|||+..
T Consensus 274 ~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 274 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 899999999999995555899999999999999998 4555555 4889999999999996 6888874 5599999987
Q ss_pred Cccc-----------cCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 222 REET-----------SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 222 ~~~~-----------~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.... .......+|...|++++|+|+++++++++.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred CccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 3211 112344567889999999999995555554
No 107
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.82 E-value=3.1e-18 Score=182.46 Aligned_cols=229 Identities=13% Similarity=0.173 Sum_probs=167.1
Q ss_pred CEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEE
Q 004785 82 RGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~----L~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVa 156 (730)
..+++++.|+.|++||..+++ +..| ..+.+++|+|+|++| ++++.|+.|++||+.+++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 467788899999999998873 3344 459999999999977 667789999999999999998888665 799999
Q ss_pred EccCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEE-EEE-CCeEEEEEcCCCccccCCeEEec
Q 004785 157 FHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA-VAS-GHKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 157 fSP~dg~lL-aSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LA-sgS-dd~I~VWDl~t~~~~~~~~~l~~ 233 (730)
|+| +++++ ++++.|+.|++||+.+++.+..+.+...+.+++|+|+|++|+ +++ ++.|++||+.+++... ...
T Consensus 81 ~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~----~~~ 155 (391)
T 1l0q_A 81 VSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN----TVS 155 (391)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE----EEE
T ss_pred ECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE----EEe
Confidence 999 66655 566678999999999999988888888899999999999874 555 4559999998876543 233
Q ss_pred CCCCeEEEEEccCCCeEEEEEe------eCCccCCCcceeEecc----------CCcccC------CCCeEEEecCCCCC
Q 004785 234 TRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLATS----------PGYWRY------PPPVICMAGAHSSS 291 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Llatgs------vwdl~s~~~~~~l~t~----------sG~~~~------p~~~V~l~d~~s~d 291 (730)
....+..++|+|+|+++++++. +|++........+... .|..-+ ....+.+|+...+.
T Consensus 156 ~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 156 VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 3467799999999998866543 7777655433332211 111000 12456666655443
Q ss_pred CCCcccccCCCCCCceeeeEecCCCEEEEE
Q 004785 292 HPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 292 ~~~L~~~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
....... ......+.|++|+++|++.
T Consensus 236 ~~~~~~~----~~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 236 ITARIPV----GPDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp EEEEEEC----CSSEEEEEECTTSSEEEEE
T ss_pred EEEEEec----CCCccEEEEccCCCEEEEE
Confidence 3222221 1223568999999999763
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.82 E-value=1.2e-18 Score=190.63 Aligned_cols=172 Identities=19% Similarity=0.209 Sum_probs=153.1
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcE
Q 004785 78 RDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~ 153 (730)
...+..+++++.|+.|++||+.++ .+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~ 356 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVG 356 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEE
Confidence 345789999999999999999876 4778999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEEec
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~~l~~ 233 (730)
+++|++ +++++++.|++|++||+.+++......+...+..++|++++++|++++++.|++||+++++.+. .....
T Consensus 357 ~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~--~~~~~ 431 (464)
T 3v7d_B 357 LLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH--ANILK 431 (464)
T ss_dssp EEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEE--SCTTT
T ss_pred EEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEe--hhhcc
Confidence 999964 8999999999999999999988888888888999999999999999998889999999987644 12456
Q ss_pred CCCCeEEEEEccCCCeEEEEEee
Q 004785 234 TRRSLRAVHFHPHAAPLLLTAEV 256 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Llatgsv 256 (730)
|...|.+++|+ ++.+++++..
T Consensus 432 ~~~~v~~v~~~--~~~l~~~~~~ 452 (464)
T 3v7d_B 432 DADQIWSVNFK--GKTLVAAVEK 452 (464)
T ss_dssp TCSEEEEEEEE--TTEEEEEEEE
T ss_pred CCCcEEEEEec--CCEEEEEEEe
Confidence 78899999997 5667766653
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.82 E-value=2.7e-18 Score=192.64 Aligned_cols=171 Identities=11% Similarity=0.065 Sum_probs=145.3
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC----C----CCCCCCC-eEEEEECC--CCCEEEEEeCCCeEEEEECCCC-------
Q 004785 78 RDARRGLASWVEAESLHHLRPKYC----P----LSPPPRS-TIAAAFSP--DGKTLASTHGDHTVKIIDCQTG------- 139 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~----~----L~gH~~~-Vt~lafSP--DG~~LaSgS~DgtVrVWDl~tg------- 139 (730)
..++..|+.+. ++.|++||..++ . +.+|... |++++|+| |+++|++++.|+.|++||+.++
T Consensus 27 spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 105 (615)
T 1pgu_A 27 DPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVE 105 (615)
T ss_dssp ETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEE
T ss_pred CCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccc
Confidence 34677788777 889999999865 3 6789999 99999999 9999999999999999999755
Q ss_pred -eEEEEEecCCCCcEEEEEccCCCCEEEEEeCC----CcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCC-EEEEEEC-
Q 004785 140 -SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD----HEVRLWNASTAECIGSR-DFYRPIASIAFHASGE-LLAVASG- 211 (730)
Q Consensus 140 -~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~D----gtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~-~LAsgSd- 211 (730)
+.+..+..|...|.+++|+| +++++++++.| +.|++|| +++.+..+ .|...|.+++|+|+++ +|++++.
T Consensus 106 ~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 182 (615)
T 1pgu_A 106 VNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 182 (615)
T ss_dssp EEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETT
T ss_pred ccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCC
Confidence 67788899999999999999 89999999988 6888888 45555554 5889999999999998 7888885
Q ss_pred CeEEEEEcCCCccccCCeEEecCCC---CeEEEEEccC-CCeEEEEEe
Q 004785 212 HKLYIWRYNMREETSSPRIVLRTRR---SLRAVHFHPH-AAPLLLTAE 255 (730)
Q Consensus 212 d~I~VWDl~t~~~~~~~~~l~~h~~---~V~sVaFSPd-G~~Llatgs 255 (730)
+.|++||+.+.+... .+..|.. .|.+++|+|+ ++++++++.
T Consensus 183 ~~v~vwd~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSA---SDRTHHKQGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp TEEEEEETTTBEEEE---EECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred CcEEEEeCCCcceee---eecccCCCCceEEEEEECCCCCCEEEEEeC
Confidence 559999998877544 5667888 9999999999 997777654
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.82 E-value=7.1e-19 Score=193.42 Aligned_cols=175 Identities=14% Similarity=0.072 Sum_probs=147.8
Q ss_pred EEEecCCCEE-EEEeCCCeEEEEeCC--CCC----CC--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE--
Q 004785 75 EAGRDARRGL-ASWVEAESLHHLRPK--YCP----LS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK-- 143 (730)
Q Consensus 75 ~a~~d~g~~L-~Sgs~DgsIrlWd~~--t~~----L~--gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~-- 143 (730)
++....+..| ++++.|+.|++||+. ++. +. .|...|++++|+|++++|++++.|+.|++|++.+++...
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence 3344566675 899999999999988 552 32 677899999999999999999999999999998877544
Q ss_pred --EEecCCCCcEEEEEccCC---CCEEEEEeCCCcEEEEECCCCeEEEE-e-cCCCCeEEEEEcCCCCEEEEEECC-eEE
Q 004785 144 --VLHGHRRTPWVVRFHPLN---PTIIASGSLDHEVRLWNASTAECIGS-R-DFYRPIASIAFHASGELLAVASGH-KLY 215 (730)
Q Consensus 144 --~l~gH~~~V~sVafSP~d---g~lLaSgS~DgtVrLWDl~tg~~i~~-l-~h~~~V~sVafSPdG~~LAsgSdd-~I~ 215 (730)
.+.+|...|.+++|+| + +.+|++++.|++|++||+.+++.+.. + .|...|.+++|+ +|++|++++.+ .|+
T Consensus 188 ~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIF 265 (450)
T ss_dssp CCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEE
T ss_pred ceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEE
Confidence 7789999999999999 7 88999999999999999999987766 3 588999999999 99999999955 599
Q ss_pred EEEcCCCccccCCeEEe-------------------------cCCCCeEEEEEccCCCeEEEEE
Q 004785 216 IWRYNMREETSSPRIVL-------------------------RTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 216 VWDl~t~~~~~~~~~l~-------------------------~h~~~V~sVaFSPdG~~Llatg 254 (730)
|||+++++... .+. .....|..++|+|+++++++++
T Consensus 266 vwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 266 AWDWKTGKNLS---TFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EEETTTCCEEE---EEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCcEee---eecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 99999887543 221 2346799999999999888876
No 111
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.82 E-value=1.2e-18 Score=181.42 Aligned_cols=177 Identities=13% Similarity=0.139 Sum_probs=142.3
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEE--CCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAF--SPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~---~L~gH~~~Vt~laf--SPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (730)
+.....+..|++++.|+.|++||..++ .+.+|...|.+++| ++++++|++++.|+.|++||+++++.+..+..|.
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 334457789999999999999999877 35679999999999 8999999999999999999999988777776543
Q ss_pred -----------------------------------------CCcEEEEEccCCCC----EEEEEeCCCcEEEEECCCC--
Q 004785 150 -----------------------------------------RTPWVVRFHPLNPT----IIASGSLDHEVRLWNASTA-- 182 (730)
Q Consensus 150 -----------------------------------------~~V~sVafSP~dg~----lLaSgS~DgtVrLWDl~tg-- 182 (730)
..+.++.+.+ +.. .+++++.|+.|++||+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 172 RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence 2234444444 222 2899999999999999886
Q ss_pred -eEEEEec-CCC------------CeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCC
Q 004785 183 -ECIGSRD-FYR------------PIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHA 247 (730)
Q Consensus 183 -~~i~~l~-h~~------------~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG 247 (730)
+.+..+. |.. .|.+++|+|+|++|++++.+ .|+|||+++++... .+..|...|.+++|+|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK---TSEQLDQPISACCFNHNG 327 (368)
T ss_dssp HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE---ECCCCSSCEEEEEECTTS
T ss_pred cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE---EecCCCCCceEEEECCCC
Confidence 3333332 332 69999999999999999955 59999999887644 566889999999999999
Q ss_pred CeEEEEEe
Q 004785 248 APLLLTAE 255 (730)
Q Consensus 248 ~~Llatgs 255 (730)
++|++++.
T Consensus 328 ~~l~~~s~ 335 (368)
T 3mmy_A 328 NIFAYASS 335 (368)
T ss_dssp SCEEEEEC
T ss_pred CeEEEEec
Confidence 98888776
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.81 E-value=3.4e-18 Score=191.82 Aligned_cols=183 Identities=12% Similarity=0.095 Sum_probs=155.0
Q ss_pred EEEEEec--CCCEEEEEeCCCeEEEEeCCCC------------CCCCCCCCeEEEEECCCCCEEEEEeCC----CeEEEE
Q 004785 73 IFEAGRD--ARRGLASWVEAESLHHLRPKYC------------PLSPPPRSTIAAAFSPDGKTLASTHGD----HTVKII 134 (730)
Q Consensus 73 ll~a~~d--~g~~L~Sgs~DgsIrlWd~~t~------------~L~gH~~~Vt~lafSPDG~~LaSgS~D----gtVrVW 134 (730)
...+... ++..|++++.|+.|++||..++ .+..|...|.+++|+|++++|++++.| +.|++|
T Consensus 68 ~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~ 147 (615)
T 1pgu_A 68 TTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISW 147 (615)
T ss_dssp EEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEET
T ss_pred EEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEE
Confidence 3344455 7889999999999999999633 366799999999999999999999988 688888
Q ss_pred ECCCCeEEEEEecCCCCcEEEEEccCCCC-EEEEEeCCCcEEEEECCCCeEEEEec-CCC---CeEEEEEcCC-CCEEEE
Q 004785 135 DCQTGSCLKVLHGHRRTPWVVRFHPLNPT-IIASGSLDHEVRLWNASTAECIGSRD-FYR---PIASIAFHAS-GELLAV 208 (730)
Q Consensus 135 Dl~tg~~l~~l~gH~~~V~sVafSP~dg~-lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~---~V~sVafSPd-G~~LAs 208 (730)
| +++.+..+.+|...|.+++|+| ++. ++++++.|+.|++||+.+++.+..+. |.. .|.+++|+|+ +++|++
T Consensus 148 d--~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 224 (615)
T 1pgu_A 148 D--SGNSLGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT 224 (615)
T ss_dssp T--TCCEEEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE
T ss_pred E--CCCcceeeecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEE
Confidence 8 6778899999999999999999 555 89999999999999999999888875 777 8999999999 999999
Q ss_pred EEC-CeEEEEEcCCCccccCCeEE-e---cCCCCeEEEEEccCCCeEEEEEe-----eCCccCC
Q 004785 209 ASG-HKLYIWRYNMREETSSPRIV-L---RTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSS 262 (730)
Q Consensus 209 gSd-d~I~VWDl~t~~~~~~~~~l-~---~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~ 262 (730)
++. +.|++||+++++... .+ . .|...|.+++|+ +++++++++. +|++..+
T Consensus 225 ~~~dg~i~vwd~~~~~~~~---~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 225 VGSDRKISCFDGKSGEFLK---YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp EETTCCEEEEETTTCCEEE---ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT
T ss_pred EeCCCeEEEEECCCCCEeE---EecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC
Confidence 995 459999999887544 33 3 789999999999 9998777664 5555533
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.81 E-value=2e-18 Score=186.43 Aligned_cols=214 Identities=10% Similarity=0.068 Sum_probs=165.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC---------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP---------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~---------L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
++..++++..++.|++||..+++ +.+|...|.+++|+++++++++++.|+.|++||+++++.+..+..|..
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~ 212 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGK 212 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSS
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCC
Confidence 55667777788899999998763 337888999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE---------CCeEEEEEcC
Q 004785 151 TPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS---------GHKLYIWRYN 220 (730)
Q Consensus 151 ~V~sVafSP~dg~lL-aSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS---------dd~I~VWDl~ 220 (730)
.+.+++|+| +++.+ ++++.|+.|++||+++++.+..+.....+.+++|+|+|++|++++ ++.|++||+.
T Consensus 213 ~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 213 WSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp SEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred CeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 999999999 66655 566689999999999999988888777899999999999998887 3459999999
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccC
Q 004785 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVP 300 (730)
Q Consensus 221 t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~ 300 (730)
+++... ...+...+..++|+|+++++++++... ..+.+|+..+........
T Consensus 292 ~~~~~~----~~~~~~~~~~~~~~~~g~~l~~~~~~~----------------------~~v~v~d~~~~~~~~~~~--- 342 (433)
T 3bws_A 292 KEKLID----TIGPPGNKRHIVSGNTENKIYVSDMCC----------------------SKIEVYDLKEKKVQKSIP--- 342 (433)
T ss_dssp TTEEEE----EEEEEECEEEEEECSSTTEEEEEETTT----------------------TEEEEEETTTTEEEEEEE---
T ss_pred CCcEEe----eccCCCCcceEEECCCCCEEEEEecCC----------------------CEEEEEECCCCcEEEEec---
Confidence 876533 345556889999999999877765310 123333332221111111
Q ss_pred CCCCCceeeeEecCCCEEEEEecC
Q 004785 301 LITPPFLRPSFVRDDERISLQHTE 324 (730)
Q Consensus 301 ~~slpil~p~FSpDg~rI~~~~~~ 324 (730)
.......++|++|++.+++....
T Consensus 343 -~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 343 -VFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp -CSSSEEEEEECTTSSEEEEEECC
T ss_pred -CCCCCCeEEEcCCCCEEEEEecC
Confidence 11234478999999999885543
No 114
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.6e-18 Score=177.23 Aligned_cols=166 Identities=13% Similarity=0.162 Sum_probs=143.2
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC--CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEEec-CCCCcEEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYC--PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHG-HRRTPWVV 155 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~--~L~gH~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~g-H~~~V~sV 155 (730)
.+..+++++.|+.|++||.... .+..|...|.++.|++ ++++|++++.|+.|++|| .++.+..+.. |...|.++
T Consensus 113 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~ 190 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHL 190 (313)
T ss_dssp ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEE
T ss_pred cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEE
Confidence 4678999999999999993322 4678999999999998 999999999999999999 5677778877 99999999
Q ss_pred EEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEec
Q 004785 156 RFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~ 233 (730)
+|+| ++. +++++.|+.|++||+++++.+..+. |...|.+++|+|+|+ |++++ ++.|++||+++++... .+..
T Consensus 191 ~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~---~~~~ 264 (313)
T 3odt_A 191 AVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQ---VITL 264 (313)
T ss_dssp EEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEE---EEEC
T ss_pred EEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeE---EEec
Confidence 9999 666 9999999999999999999888765 889999999999995 66666 5669999999887644 6677
Q ss_pred CCCCeEEEEEccCCCeEEEEE
Q 004785 234 TRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Llatg 254 (730)
|...|.+++|+|+++ +++++
T Consensus 265 ~~~~i~~~~~~~~~~-~~~~~ 284 (313)
T 3odt_A 265 PAISIWSVDCMSNGD-IIVGS 284 (313)
T ss_dssp SSSCEEEEEECTTSC-EEEEE
T ss_pred cCceEEEEEEccCCC-EEEEe
Confidence 888999999999998 55544
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.81 E-value=4.3e-19 Score=214.36 Aligned_cols=160 Identities=8% Similarity=0.070 Sum_probs=134.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCC---------------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC-----
Q 004785 80 ARRGLASWVEAESLHHLRPKYCPLS---------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG----- 139 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~L~---------------gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg----- 139 (730)
.+..|++++.|++|++||+.++.+. +|...|++++|+|||++||+|+.|++|+|||+.++
T Consensus 446 dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~ 525 (902)
T 2oaj_A 446 YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSV 525 (902)
T ss_dssp EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---
T ss_pred cCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCc
Confidence 4678999999999999999876432 78899999999999999999999999999999776
Q ss_pred ----------------------------------------eEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEEC
Q 004785 140 ----------------------------------------SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA 179 (730)
Q Consensus 140 ----------------------------------------~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl 179 (730)
+++..+.+|.+.|++|+|+| ++ +|++|+.|++|+|||+
T Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp-dG-~lAsgs~D~tv~lwd~ 603 (902)
T 2oaj_A 526 ENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN-IG-FVGIAYAAGSLMLIDR 603 (902)
T ss_dssp ------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-TS-EEEEEETTSEEEEEET
T ss_pred cccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-Cc-EEEEEeCCCcEEEEEC
Confidence 24678889999999999999 88 9999999999999999
Q ss_pred CCCeEEEE-----e--cCCCCeEEEEEc-----CCC---CEEEEEECC-eEEEEEc---CCCccccCCeEEecC-----C
Q 004785 180 STAECIGS-----R--DFYRPIASIAFH-----ASG---ELLAVASGH-KLYIWRY---NMREETSSPRIVLRT-----R 235 (730)
Q Consensus 180 ~tg~~i~~-----l--~h~~~V~sVafS-----PdG---~~LAsgSdd-~I~VWDl---~t~~~~~~~~~l~~h-----~ 235 (730)
+++..+.. + .|...|++++|+ ||| ++|++|+.+ .|++||+ .+++... .+.+| .
T Consensus 604 ~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~---~~~~~~~~~~~ 680 (902)
T 2oaj_A 604 RGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDV---QLMDITNVTSK 680 (902)
T ss_dssp TTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEE---EEEEEEECCSS
T ss_pred CCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEE---EecCceecCCC
Confidence 88876542 2 577889999999 886 799999955 5999999 5555332 33333 5
Q ss_pred CCeEEEE-Ec
Q 004785 236 RSLRAVH-FH 244 (730)
Q Consensus 236 ~~V~sVa-FS 244 (730)
..|..+. |+
T Consensus 681 ~~v~~i~~~~ 690 (902)
T 2oaj_A 681 GPIHKIDAFS 690 (902)
T ss_dssp CCCCEEEEEE
T ss_pred CceEEEEeEe
Confidence 7787777 76
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.80 E-value=1.8e-17 Score=170.16 Aligned_cols=180 Identities=20% Similarity=0.320 Sum_probs=150.4
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC---------------------------------------------CCCCCC
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYC---------------------------------------------PLSPPP 107 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~---------------------------------------------~L~gH~ 107 (730)
..++....+..|++++.|++|++|+..++ .+.+|.
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS 150 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCcc
Confidence 44555667788888888888888887642 134688
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe----EEEEEecCCCCcEEEEEccCCCCEEE--EEeCCCcEEEEECCC
Q 004785 108 RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS----CLKVLHGHRRTPWVVRFHPLNPTIIA--SGSLDHEVRLWNAST 181 (730)
Q Consensus 108 ~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~----~l~~l~gH~~~V~sVafSP~dg~lLa--SgS~DgtVrLWDl~t 181 (730)
..+.++.|++++++|++++.|++|++||+.+++ .......|.+.|..+.++|.+.+++. +++.|++|++||...
T Consensus 151 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~ 230 (318)
T 4ggc_A 151 QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 230 (318)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT
T ss_pred CceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc
Confidence 899999999999999999999999999998865 34566778899999999996666654 566789999999999
Q ss_pred CeEEEEecCCCCeEEEEEcCCCCEEEEEE---CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 182 AECIGSRDFYRPIASIAFHASGELLAVAS---GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 182 g~~i~~l~h~~~V~sVafSPdG~~LAsgS---dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
........+...+..+.|+|+++.+++++ ++.|+|||+++++.+. .+.+|...|++++|+|||++|++++.
T Consensus 231 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~---~l~gH~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 231 GACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA---ELKGHTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp CCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSCEEEEET
T ss_pred ccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE---EEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 99888888999999999999999888776 3459999999988654 67889999999999999998887664
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.7e-18 Score=204.40 Aligned_cols=181 Identities=13% Similarity=0.152 Sum_probs=151.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCe--EEEEEecCCC
Q 004785 81 RRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKVLHGHRR 150 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~------~L~gH~~~Vt~lafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~l~gH~~ 150 (730)
+..|++++.|++|++||..++ .+.+|...|++++|+|+ +++|++|+.|+.|++||+.++. ....+.+|..
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 789999999999999998876 36789999999999999 9999999999999999998873 4466788999
Q ss_pred CcEEEEEccC------------CCCEEEEEeCCCcEEEEECCCCe----EEEEe-cCCCCeEEEEEcCC---CCEEEEEE
Q 004785 151 TPWVVRFHPL------------NPTIIASGSLDHEVRLWNASTAE----CIGSR-DFYRPIASIAFHAS---GELLAVAS 210 (730)
Q Consensus 151 ~V~sVafSP~------------dg~lLaSgS~DgtVrLWDl~tg~----~i~~l-~h~~~V~sVafSPd---G~~LAsgS 210 (730)
.|.+++|+|. ++.++++++.||+|++||++++. ....+ .|...|.+++|+|+ +++|++++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 9999999994 48899999999999999998873 33333 48899999999999 89999999
Q ss_pred CC-eEEEEEcCCCcccc--CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCccC
Q 004785 211 GH-KLYIWRYNMREETS--SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (730)
Q Consensus 211 dd-~I~VWDl~t~~~~~--~~~~l~~h~~~V~sVaFSPdG~~Llatgs-----vwdl~s 261 (730)
.+ .|++||++++.... .......|...|++++|+|+|+++++++. +|++..
T Consensus 227 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 55 59999998864211 11223457889999999999998887765 676663
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.80 E-value=2e-18 Score=208.46 Aligned_cols=184 Identities=13% Similarity=0.083 Sum_probs=151.6
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (730)
..++....+..|++++.|++|++|+..... ...|...|.+++|+| |++|++++.|++|+|||+.+++.+..+. |.
T Consensus 21 ~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~ 98 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VP 98 (902)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CS
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CC
Confidence 344555678899999999999999987653 235788999999999 8899999999999999999999998886 66
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE------------ecCCCCeEEEEEcCC-CCEEEEEECCe-EE
Q 004785 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS------------RDFYRPIASIAFHAS-GELLAVASGHK-LY 215 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~------------l~h~~~V~sVafSPd-G~~LAsgSdd~-I~ 215 (730)
+.|++++|+| +++++++|+.||+|++||+.+++.... ..|.+.|.+++|+|+ +..|++|++++ |
T Consensus 99 ~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v- 176 (902)
T 2oaj_A 99 GKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL- 176 (902)
T ss_dssp SCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-
T ss_pred CCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-
Confidence 8899999999 999999999999999999998876411 237789999999996 46888888555 8
Q ss_pred EEEcCCCccccCCeEEec------------------CCCCeEEEEEccCCCeEEEEEe-----eCCccCCC
Q 004785 216 IWRYNMREETSSPRIVLR------------------TRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSE 263 (730)
Q Consensus 216 VWDl~t~~~~~~~~~l~~------------------h~~~V~sVaFSPdG~~Llatgs-----vwdl~s~~ 263 (730)
+||+++++... .+.. |...|.+++|+|+|++|++++. +|+++.++
T Consensus 177 lWd~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 177 TYSLVENEIKQ---SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEETTTTEEEE---EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEECCCCceEE---EEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 99999876543 2322 3578999999999998877765 67766543
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.79 E-value=1.6e-17 Score=177.87 Aligned_cols=181 Identities=8% Similarity=0.023 Sum_probs=138.2
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCCC--CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCc
Q 004785 76 AGRDARRGLASWVEAESLHHLRPKYCP--LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTP 152 (730)
Q Consensus 76 a~~d~g~~L~Sgs~DgsIrlWd~~t~~--L~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~~~V 152 (730)
+...++..|+++..+ .+++|+..... +..+...+..++|.++++.+ ++++.|++|+|||+.+++.+..+. |...|
T Consensus 26 ~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v 103 (355)
T 3vu4_A 26 EFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPV 103 (355)
T ss_dssp EECTTSSEEEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCE
T ss_pred EECCCCCEEEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCce
Confidence 334567788887766 47899987653 22233358889999988877 567778999999999999998887 56689
Q ss_pred EEEEEccCCC-----------------------------------CEEEE--EeCCCcEEEEECCCCe------------
Q 004785 153 WVVRFHPLNP-----------------------------------TIIAS--GSLDHEVRLWNASTAE------------ 183 (730)
Q Consensus 153 ~sVafSP~dg-----------------------------------~lLaS--gS~DgtVrLWDl~tg~------------ 183 (730)
.+++|++ +. .+++. ++.||+|++||+.+++
T Consensus 104 ~~v~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~ 182 (355)
T 3vu4_A 104 KDLFLSR-EFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQK 182 (355)
T ss_dssp EEEEECS-SEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC--------------
T ss_pred EEEEEcC-CEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccccccccccc
Confidence 9999887 31 23333 5788999999998765
Q ss_pred -----EEEEecCCCCeEEEEEcCCCCEEEEEE-CCe-EEEEEcCCCccccCCeEEe-c-CCCCeEEEEEccCCCeEEEEE
Q 004785 184 -----CIGSRDFYRPIASIAFHASGELLAVAS-GHK-LYIWRYNMREETSSPRIVL-R-TRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 184 -----~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~-I~VWDl~t~~~~~~~~~l~-~-h~~~V~sVaFSPdG~~Llatg 254 (730)
......|...|.+++|+|+|++|++++ |+. |+|||+++++... .+. + |...|.+++|+|+|++|++++
T Consensus 183 ~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~---~~~~g~h~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 183 AILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVR---EFRRGLDRADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp ----CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEE---EEECTTCCSCEEEEEECTTSCEEEEEE
T ss_pred ccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE---EEEcCCCCCcEEEEEECCCCCEEEEEE
Confidence 223346899999999999999999999 565 9999999887644 444 4 899999999999999888766
Q ss_pred e-----eCCccCC
Q 004785 255 E-----VNDLDSS 262 (730)
Q Consensus 255 s-----vwdl~s~ 262 (730)
. +|++...
T Consensus 260 ~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 260 DKWTLHVFEIFND 272 (355)
T ss_dssp TTCEEEEEESSCC
T ss_pred CCCEEEEEEccCC
Confidence 4 7777643
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.1e-18 Score=197.25 Aligned_cols=163 Identities=16% Similarity=0.164 Sum_probs=124.0
Q ss_pred EEEeCCCeEEEEeCCCC----CCC-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCC-----CcEE
Q 004785 85 ASWVEAESLHHLRPKYC----PLS-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR-----TPWV 154 (730)
Q Consensus 85 ~Sgs~DgsIrlWd~~t~----~L~-gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~-----~V~s 154 (730)
+..+.||.++.|+..+. .+. .|...|.+++|||||++||+++.||.|+|||.++ ++..+. |.. .|.+
T Consensus 58 V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~s 134 (588)
T 2j04_A 58 VKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHC 134 (588)
T ss_dssp EEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEE
T ss_pred EEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEE
Confidence 34444555555555543 222 6688899999999999999999999999999644 667777 765 4999
Q ss_pred EEEccCCCCEEEEEeCCCcEEEEECCCCeE-------EEEe-----cCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCC
Q 004785 155 VRFHPLNPTIIASGSLDHEVRLWNASTAEC-------IGSR-----DFYRPIASIAFHASGELLAVASGHKLYIWRYNMR 222 (730)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~-------i~~l-----~h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~ 222 (730)
++||| ++++|++|+.||+|+|||+.++.. +..+ +|...|.+++|+||| +++++.|+.|++||+..+
T Consensus 135 vafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 135 FEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp EEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSS
T ss_pred EEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCC
Confidence 99999 999999999999999999998752 3443 366799999999999 444444666999999877
Q ss_pred ccccCCeEE-ecCCCCeEEEEEccCCCeEEEEE
Q 004785 223 EETSSPRIV-LRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 223 ~~~~~~~~l-~~h~~~V~sVaFSPdG~~Llatg 254 (730)
........+ ..|...|.+++|+ |..+++++
T Consensus 213 ~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 213 SHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp SSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred ccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 632111234 3688899999999 56666654
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.79 E-value=6.7e-19 Score=191.17 Aligned_cols=173 Identities=14% Similarity=0.096 Sum_probs=125.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEECCCCeEEEE----------
Q 004785 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDG-KTLASTHGDHTVKIIDCQTGSCLKV---------- 144 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG-~~LaSgS~DgtVrVWDl~tg~~l~~---------- 144 (730)
++..|++++.|++|++||+.++ .+.+|...|.+++|+|++ .+|++++.|++|++||+.+++....
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 5679999999999999998765 366889999999999987 4899999999999999988754322
Q ss_pred ---------------EecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCe--------------
Q 004785 145 ---------------LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPI-------------- 194 (730)
Q Consensus 145 ---------------l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V-------------- 194 (730)
..+|...|.++.|++.++..+++++.|+++++||+.+++....+. +...+
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence 246788899999984489999999999999999998876544331 22222
Q ss_pred ----EEEEEcC--CCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 195 ----ASIAFHA--SGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 195 ----~sVafSP--dG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
....|+| ++.++++|+ |+.|+|||+.+++... ....|...|++++|+|||++|+++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~---~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS---IPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE---EEEECSSCEEEEEECTTSSEEEEEES
T ss_pred cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE---EecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 2233444 333556666 4559999999887533 66788899999999999998876653
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.79 E-value=3e-18 Score=185.52 Aligned_cols=171 Identities=14% Similarity=0.076 Sum_probs=129.1
Q ss_pred cCCCEEEEEe--CCCeEEEEeCCC-CC----CCCCCCCeEEEEECC---CCCEEEEEeCCCeEEEEECCCCeEEEEEecC
Q 004785 79 DARRGLASWV--EAESLHHLRPKY-CP----LSPPPRSTIAAAFSP---DGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (730)
Q Consensus 79 d~g~~L~Sgs--~DgsIrlWd~~t-~~----L~gH~~~Vt~lafSP---DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH 148 (730)
..++.+.+.. .|+.|++|++.. ++ +.+|...++.++|++ ++.+|++++.|++|+|||+++|++++.|.+|
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 3444444433 599999999843 43 457888899999999 7799999999999999999999999999875
Q ss_pred C---CCcEEEEEccCCCCEE------------EEEeCCCcEEEEECCCCeEEEEe------cCCCCeEEEEEcCCCCEEE
Q 004785 149 R---RTPWVVRFHPLNPTII------------ASGSLDHEVRLWNASTAECIGSR------DFYRPIASIAFHASGELLA 207 (730)
Q Consensus 149 ~---~~V~sVafSP~dg~lL------------aSgS~DgtVrLWDl~tg~~i~~l------~h~~~V~sVafSPdG~~LA 207 (730)
. ..+.+++|+| ++.++ ++|+.|++|++||..+++.+..+ +|...+.+..+ ++.+++
T Consensus 223 ~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lA 299 (356)
T 2w18_A 223 DSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAA 299 (356)
T ss_dssp C---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEE
T ss_pred CcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEE
Confidence 4 3677889999 77765 67889999999999999987664 34444444444 488999
Q ss_pred EEE-CCeEEEEEcCCCccccCCeEEecCCCCeE-EEEEccCCCeEEEEEe
Q 004785 208 VAS-GHKLYIWRYNMREETSSPRIVLRTRRSLR-AVHFHPHAAPLLLTAE 255 (730)
Q Consensus 208 sgS-dd~I~VWDl~t~~~~~~~~~l~~h~~~V~-sVaFSPdG~~Llatgs 255 (730)
+++ |++|+|||+.+++... .+.+|...+. .++|+|||++|++++.
T Consensus 300 SgS~DgTIkIWDl~tGk~l~---tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 300 AILTSGTIAIWDLLLGQCTA---LLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp EEETTSCEEEEETTTCSEEE---EECCC--CCCCEEEECSSSSEEEEECT
T ss_pred EEcCCCcEEEEECCCCcEEE---EecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 998 5559999999998654 5667776655 6899999998776653
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.77 E-value=6.1e-17 Score=174.80 Aligned_cols=226 Identities=8% Similarity=0.053 Sum_probs=169.8
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCc
Q 004785 78 RDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTP 152 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~~~V 152 (730)
..++..+++++.|+.|++||.+++ .+..|...+.+++|+|++++|+++ +.|+.|++||+.+++.+..+..+. .+
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~ 256 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LP 256 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-Cc
Confidence 456778889999999999999876 355788899999999999988555 479999999999999888887654 59
Q ss_pred EEEEEccCCCCEEEEEe--------CCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEE-E-CCeEEEEEcCCC
Q 004785 153 WVVRFHPLNPTIIASGS--------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVA-S-GHKLYIWRYNMR 222 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS--------~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsg-S-dd~I~VWDl~t~ 222 (730)
.+++|+| +++++++++ .|+.|++||+.+++.+..+.+...+..++|+|+|+.|++. + ++.|++||+.++
T Consensus 257 ~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 257 RGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp EEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred eEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 9999999 888888877 5889999999999988888777889999999999866555 4 456999999987
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCC
Q 004785 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLI 302 (730)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~ 302 (730)
+... ...+...+.+++|+|+|++++++....+..... . ...|. ....+.+|+..+.+.......
T Consensus 336 ~~~~----~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~--~---~~~g~---~dg~v~~~d~~~~~~~~~~~~---- 399 (433)
T 3bws_A 336 KVQK----SIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEG--Y---LKKGL---VLGKVYVIDTTTDTVKEFWEA---- 399 (433)
T ss_dssp EEEE----EEECSSSEEEEEECTTSSEEEEEECCCCCTTTC--T---TSCCS---SCCEEEEEETTTTEEEEEEEC----
T ss_pred cEEE----EecCCCCCCeEEEcCCCCEEEEEecCCCccccc--c---ccccc---cceEEEEEECCCCcEEEEecC----
Confidence 6533 345778899999999999887776432211000 0 00111 123677777655443333222
Q ss_pred CCCceeeeEecCCCEEEEE
Q 004785 303 TPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 303 slpil~p~FSpDg~rI~~~ 321 (730)
......+.|+||++.|++.
T Consensus 400 ~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp SSSEEEEEECTTSCEEEEE
T ss_pred CCCCceEEEcCCCCEEEEE
Confidence 2234578999999999874
No 124
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.77 E-value=5.7e-17 Score=177.18 Aligned_cols=164 Identities=19% Similarity=0.314 Sum_probs=142.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE---EEEecCCCCc
Q 004785 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL---KVLHGHRRTP 152 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l---~~l~gH~~~V 152 (730)
.+..|++++.|++|++||..++ .+.+|...|.+++|+ +.+|++|+.|+.|++||+.+++.+ ..+.+|...|
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 259 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 259 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcE
Confidence 6789999999999999999876 467899999999997 469999999999999999987655 6788999999
Q ss_pred EEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeE
Q 004785 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRI 230 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~ 230 (730)
.+++| +++++++++.|++|++||+++++.+..+. |...|.++.| ++++|++|+.+ .|++||+++++... .
T Consensus 260 ~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~---~ 331 (435)
T 1p22_A 260 NVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR---V 331 (435)
T ss_dssp EEEEE---ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEE---E
T ss_pred EEEEe---CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEE---E
Confidence 99999 46899999999999999999999888765 8889999999 47899999854 59999999887644 6
Q ss_pred EecCCCCeEEEEEccCCCeEEEEEe
Q 004785 231 VLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 231 l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+..|...|.+++| ++.++++++.
T Consensus 332 ~~~h~~~v~~~~~--~~~~l~sg~~ 354 (435)
T 1p22_A 332 LEGHEELVRCIRF--DNKRIVSGAY 354 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEET
T ss_pred EeCCcCcEEEEEe--cCCEEEEEeC
Confidence 7789999999999 6777776654
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.76 E-value=1.7e-17 Score=177.70 Aligned_cols=169 Identities=11% Similarity=0.080 Sum_probs=126.4
Q ss_pred EEEeCCCeEEEEeCCCCCC---CCCCCCeEEEEECCCC-----------------------------------CEEEE--
Q 004785 85 ASWVEAESLHHLRPKYCPL---SPPPRSTIAAAFSPDG-----------------------------------KTLAS-- 124 (730)
Q Consensus 85 ~Sgs~DgsIrlWd~~t~~L---~gH~~~Vt~lafSPDG-----------------------------------~~LaS-- 124 (730)
++++.|++|++||..+++. ..|...|.++.|+++. .+|++
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~s 154 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSN 154 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEE
T ss_pred EEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeC
Confidence 4566667778887766521 1245567777776542 34444
Q ss_pred EeCCCeEEEEECCCCe----------------EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCc-EEEEECCCCeEEEE
Q 004785 125 THGDHTVKIIDCQTGS----------------CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE-VRLWNASTAECIGS 187 (730)
Q Consensus 125 gS~DgtVrVWDl~tg~----------------~l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dgt-VrLWDl~tg~~i~~ 187 (730)
|+.|+.|++||+.+++ ++..+.+|.+.|++++|+| ++++|++++.|++ |++||+++++++..
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 4678999999998765 2678899999999999999 9999999999999 99999999999988
Q ss_pred ec---CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEE---------------------ecCCCCeEEEE
Q 004785 188 RD---FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIV---------------------LRTRRSLRAVH 242 (730)
Q Consensus 188 l~---h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l---------------------~~h~~~V~sVa 242 (730)
+. |...|.+++|+|+|++|++++.+ .|+|||++...... ...+ .........++
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 312 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNK-RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIA 312 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCC-SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEE
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcc-cccccceeeccccccccceeEEEeccCCCCCceEEE
Confidence 75 88999999999999999999965 59999997654211 0000 00122336789
Q ss_pred EccCCCeEEEEEe
Q 004785 243 FHPHAAPLLLTAE 255 (730)
Q Consensus 243 FSPdG~~Llatgs 255 (730)
|++||+++++.+.
T Consensus 313 ~~~d~~~l~~~~~ 325 (355)
T 3vu4_A 313 WISESSLVVVWPH 325 (355)
T ss_dssp ESSSSEEEEEETT
T ss_pred EeCCCCEEEEEeC
Confidence 9999997776653
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=3.8e-17 Score=179.43 Aligned_cols=222 Identities=13% Similarity=0.116 Sum_probs=161.9
Q ss_pred CCC----eEEEEeC--CCCC------CCCCCCCeEEEEECC--------------CCCEEEEEeCC------CeEEEEEC
Q 004785 89 EAE----SLHHLRP--KYCP------LSPPPRSTIAAAFSP--------------DGKTLASTHGD------HTVKIIDC 136 (730)
Q Consensus 89 ~Dg----sIrlWd~--~t~~------L~gH~~~Vt~lafSP--------------DG~~LaSgS~D------gtVrVWDl 136 (730)
.+| +|++||+ .+++ +.+|...+..+++++ .+..|+.++.+ +.|++||+
T Consensus 87 ~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~ 166 (415)
T 2hqs_A 87 PDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDY 166 (415)
T ss_dssp TTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEET
T ss_pred CCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcC
Confidence 567 8999999 7653 557777777777664 26677776664 79999999
Q ss_pred CCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCC---cEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEE-EE-C
Q 004785 137 QTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH---EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAV-AS-G 211 (730)
Q Consensus 137 ~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dg---tVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAs-gS-d 211 (730)
. +...+.+.+|...|.+++|+| +++.|++++.|+ .|++||+.+++......+...+.+++|+|||++|+. ++ +
T Consensus 167 ~-g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~ 244 (415)
T 2hqs_A 167 D-GYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT 244 (415)
T ss_dssp T-SCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT
T ss_pred C-CCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC
Confidence 7 455678888999999999999 899999998875 999999999998877778889999999999998884 44 2
Q ss_pred C--eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCC
Q 004785 212 H--KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHS 289 (730)
Q Consensus 212 d--~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s 289 (730)
+ .|++||+.+++. ..+..|...+.+++|+|||++|++++.... . ..+.+++...
T Consensus 245 g~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~spdg~~l~~~s~~~g---------------~-----~~i~~~d~~~ 300 (415)
T 2hqs_A 245 GSLNLYVMDLASGQI----RQVTDGRSNNTEPTWFPDSQNLAFTSDQAG---------------R-----PQVYKVNING 300 (415)
T ss_dssp SSCEEEEEETTTCCE----EECCCCSSCEEEEEECTTSSEEEEEECTTS---------------S-----CEEEEEETTS
T ss_pred CCceEEEEECCCCCE----EeCcCCCCcccceEECCCCCEEEEEECCCC---------------C-----cEEEEEECCC
Confidence 2 299999988754 246677888999999999998887763210 0 2455555444
Q ss_pred CCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCCcc
Q 004785 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSS 341 (730)
Q Consensus 290 ~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~~ 341 (730)
+....+.. .......+.|+|||++|++...+. ....++.+++.+...
T Consensus 301 ~~~~~l~~----~~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 301 GAPQRITW----EGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGGV 347 (415)
T ss_dssp SCCEECCC----SSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTCCE
T ss_pred CCEEEEec----CCCcccCeEECCCCCEEEEEECcC-CceEEEEEECCCCCE
Confidence 33221111 112344799999999999865432 234566666665443
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.74 E-value=4.7e-17 Score=176.18 Aligned_cols=139 Identities=11% Similarity=0.117 Sum_probs=111.2
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCCC----CCCC---CCCeEEEEECCCCCEE------------EEEeCCCeEEEEECCC
Q 004785 78 RDARRGLASWVEAESLHHLRPKYCP----LSPP---PRSTIAAAFSPDGKTL------------ASTHGDHTVKIIDCQT 138 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~~----L~gH---~~~Vt~lafSPDG~~L------------aSgS~DgtVrVWDl~t 138 (730)
.+.+..|++++.|++|++||+++++ +.+| ...+.+++|+|||+++ ++|+.|++|++||..+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 4567899999999999999999884 4444 3468888999999986 5678899999999999
Q ss_pred CeEEEEE-----ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeE-EEEEcCCCCEEEEEEC
Q 004785 139 GSCLKVL-----HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIA-SIAFHASGELLAVASG 211 (730)
Q Consensus 139 g~~l~~l-----~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~-sVafSPdG~~LAsgSd 211 (730)
++.+..+ .+|...+.+..+ ++.++++++.|++|+|||+.+++++..+. |...+. +++|+|||++|++|+.
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CEEEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 9988766 377766544444 46899999999999999999999999985 665554 6899999999999995
Q ss_pred Ce-EEEEEc
Q 004785 212 HK-LYIWRY 219 (730)
Q Consensus 212 d~-I~VWDl 219 (730)
|+ |+|||+
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 55 999996
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.73 E-value=2.6e-16 Score=167.50 Aligned_cols=189 Identities=17% Similarity=0.213 Sum_probs=148.0
Q ss_pred EEEecCCCEE-EEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCC
Q 004785 75 EAGRDARRGL-ASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (730)
Q Consensus 75 ~a~~d~g~~L-~Sgs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (730)
++....+..| +++..++.|++||..+++ ...+...+.+++|+|+|++| ++++.|+.|++||+.+++.+..+..|.
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 3344456656 456677999999998763 22345578999999999987 677889999999999999998888764
Q ss_pred CCcEEEEEccCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE----CCeEEEEEcCCCcc
Q 004785 150 RTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS----GHKLYIWRYNMREE 224 (730)
Q Consensus 150 ~~V~sVafSP~dg~lL-aSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS----dd~I~VWDl~t~~~ 224 (730)
.+..++|+| +++.+ ++++.|+.|++||+++++.+..+.+...+.+++|+|+|++|++++ ++.|++||+.+++.
T Consensus 159 -~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 159 -SPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp -SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred -CcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence 479999999 66555 778889999999999999998888888999999999999988887 34599999988765
Q ss_pred ccCCeEEecCCCCeEEEEEccCCCeEEEEEe------eCCccCCCcceeEe
Q 004785 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLA 269 (730)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs------vwdl~s~~~~~~l~ 269 (730)
.. .+.. ...+.+++|+|+|+++++++. +|++..++....+.
T Consensus 237 ~~---~~~~-~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 237 TA---RIPV-GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp EE---EEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EE---EEec-CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 33 3333 446899999999998866643 66666554444443
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=5.8e-16 Score=155.46 Aligned_cols=164 Identities=12% Similarity=0.064 Sum_probs=125.1
Q ss_pred EeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-CeEEEEEecCC-CCcEEEEEccCC
Q 004785 87 WVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-GSCLKVLHGHR-RTPWVVRFHPLN 161 (730)
Q Consensus 87 gs~DgsIrlWd~~t~---~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~t-g~~l~~l~gH~-~~V~sVafSP~d 161 (730)
...+++|++||..++ .+..|...|.+++|+|||++|++++ ++.|++||+.+ ++....+..|. ..+.+++|+| +
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-d 95 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-D 95 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-T
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-C
Confidence 456889999999876 3567889999999999999999986 78999999999 88777666663 6788999999 8
Q ss_pred CCEEEEEe--CCCc--EEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEE-EEE-CCeEEEEEcCCCccccCCeEEecCC
Q 004785 162 PTIIASGS--LDHE--VRLWNASTAECIGSRDFYRPIASIAFHASGELLA-VAS-GHKLYIWRYNMREETSSPRIVLRTR 235 (730)
Q Consensus 162 g~lLaSgS--~Dgt--VrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LA-sgS-dd~I~VWDl~t~~~~~~~~~l~~h~ 235 (730)
++++++++ .++. |.+||+.+++. ..+.....+..++|+|||++|+ +++ ++.++||+++.... ....+..+.
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ 172 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGE 172 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEECCCSS
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCce-EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEcccCC
Confidence 88898888 3344 45555555553 3444445589999999999887 444 56688888754322 123455677
Q ss_pred CCeEEEEEccCCCeEEEEEe
Q 004785 236 RSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 236 ~~V~sVaFSPdG~~Llatgs 255 (730)
..+.++.|+|+|+++++++.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp SCEEEEEECTTSSEEEEEEC
T ss_pred CccccceECCCCCEEEEEec
Confidence 88999999999998877664
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.71 E-value=1.2e-16 Score=177.42 Aligned_cols=176 Identities=15% Similarity=0.111 Sum_probs=135.1
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC-----------C--------CCCCCCCeEEEEECCCCCEEE----EEeCCCeE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC-----------P--------LSPPPRSTIAAAFSPDGKTLA----STHGDHTV 131 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~-----------~--------L~gH~~~Vt~lafSPDG~~La----SgS~DgtV 131 (730)
.+....+..++.+..++ +++|+.... . ...|...|++++|+|+|++|+ +++.|++|
T Consensus 42 lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v 120 (434)
T 2oit_A 42 LAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSII 120 (434)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEE
T ss_pred EEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceE
Confidence 34445677788888777 888764210 0 113456799999999999999 78889999
Q ss_pred EEEECCCC--------e---EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCCeEEEEE
Q 004785 132 KIIDCQTG--------S---CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAF 199 (730)
Q Consensus 132 rVWDl~tg--------~---~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~-l~h~~~V~sVaf 199 (730)
+|||+.++ + .+..+.+|...|.+++|+|+++++|++++.|++|++||++++..+.. ..|...|.+++|
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~w 200 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCW 200 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEE
Confidence 99998664 2 24566789999999999995589999999999999999999866543 457889999999
Q ss_pred cCCCCEEEEEECC-eEEEEEcCCCccccCCeEEec-------CCCCeEEEEEccCCCeEEEEEe
Q 004785 200 HASGELLAVASGH-KLYIWRYNMREETSSPRIVLR-------TRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 200 SPdG~~LAsgSdd-~I~VWDl~t~~~~~~~~~l~~-------h~~~V~sVaFSPdG~~Llatgs 255 (730)
+|+|++|++|+.+ .|++||++ ++... .+.. |...|.++.|++++.++++...
T Consensus 201 spdg~~lasgs~dg~v~iwd~~-~~~~~---~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~ 260 (434)
T 2oit_A 201 SPKGKQLAVGKQNGTVVQYLPT-LQEKK---VIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAA 260 (434)
T ss_dssp CTTSSCEEEEETTSCEEEECTT-CCEEE---EECCCTTCCTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred cCCCCEEEEEcCCCcEEEEccC-Ccccc---cccCCcccCCCCceeEEEEEEecCceEEEEEcc
Confidence 9999999999955 59999998 33211 1222 2337999999999887665543
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.70 E-value=3.8e-15 Score=154.80 Aligned_cols=174 Identities=9% Similarity=0.074 Sum_probs=134.6
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCeE-EEEEecCCCCc
Q 004785 79 DARRGLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSC-LKVLHGHRRTP 152 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~~L----~gH~~~Vt~lafSPDG~~LaSgS~-DgtVrVWDl~tg~~-l~~l~gH~~~V 152 (730)
+.+..+++...++.|.+||..++++ ..+...+ +++|+|||++|++++. ++.|++||+.+++. ...+..+....
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred CCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc
Confidence 3455677888899999999987742 3445556 9999999997777766 88999999999987 77777777766
Q ss_pred EEEEEccCCCCEEEEEeCCC---cEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE--CCe-EEEEEcCCCcccc
Q 004785 153 WVVRFHPLNPTIIASGSLDH---EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHK-LYIWRYNMREETS 226 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~Dg---tVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS--dd~-I~VWDl~t~~~~~ 226 (730)
.+++|+| ++++++++..++ .|++||+.+++.+..+.......+++|+|||++|++++ ++. |++|++.......
T Consensus 87 ~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 87 ADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 6699999 888887554442 89999999999988888777889999999998666654 367 9999998654321
Q ss_pred CC-eEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 227 SP-RIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 227 ~~-~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
.. .........+..++|+|||++++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEe
Confidence 11 12334456789999999999777665
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=5.6e-15 Score=148.22 Aligned_cols=231 Identities=11% Similarity=0.054 Sum_probs=155.7
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCC-CC----CCCC-CCCeEEEEECCCCCEEEEEeC--C--CeEEEEECCCCeEEEEEe
Q 004785 77 GRDARRGLASWVEAESLHHLRPKY-CP----LSPP-PRSTIAAAFSPDGKTLASTHG--D--HTVKIIDCQTGSCLKVLH 146 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t-~~----L~gH-~~~Vt~lafSPDG~~LaSgS~--D--gtVrVWDl~tg~~l~~l~ 146 (730)
...++..|+++. ++.|.+||..+ +. +..| ...+.+++|+|||++|++++. + ..|.+|+..+++ ...+.
T Consensus 49 ~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 126 (297)
T 2ojh_A 49 WSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT 126 (297)
T ss_dssp ECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC
T ss_pred ECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee
Confidence 345667777765 78999999988 63 3344 467899999999999999983 3 345555555555 44555
Q ss_pred cCCCCcEEEEEccCCCCEEE-EEeCCCcEEEEEC--CCCeEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCC
Q 004785 147 GHRRTPWVVRFHPLNPTIIA-SGSLDHEVRLWNA--STAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNM 221 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLa-SgS~DgtVrLWDl--~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t 221 (730)
.+. .+..++|+| +++.++ +++.|+.++||++ .+++......+...+.+++|+|+|++|++++ ++.++||+++.
T Consensus 127 ~~~-~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 127 KNL-PSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp SSS-SEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred cCC-CccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 444 488999999 666555 7889999999985 4566655566778999999999999888776 34588888863
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCC
Q 004785 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPL 301 (730)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~ 301 (730)
... ....+..+...+..+.|+|+|++|++++......... .+....+.+++...+....+... ..
T Consensus 205 ~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~------------~~~~~~l~~~d~~~~~~~~~~~~-~~ 269 (297)
T 2ojh_A 205 DGS--SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHP------------RDLDVRVQLMDMDGGNVETLFDL-FG 269 (297)
T ss_dssp TSS--CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCC------------SSEEEEEEEEETTSCSCEEEEEE-EE
T ss_pred CCC--CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccc------------ccCceEEEEEecCCCCceeeecc-CC
Confidence 322 1234556677889999999999888776543211000 00112466666555443322221 11
Q ss_pred CCCCceeeeEecCCCEEEEEecCCC
Q 004785 302 ITPPFLRPSFVRDDERISLQHTEHD 326 (730)
Q Consensus 302 ~slpil~p~FSpDg~rI~~~~~~~d 326 (730)
....+..+.|+||+++|++...+..
T Consensus 270 ~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 270 GQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp STTTSCSCCBCTTSSEEEEEEECCC
T ss_pred CCcccccceECCCCCEEEEEEeccC
Confidence 2234556899999999998666554
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=1.7e-16 Score=183.67 Aligned_cols=216 Identities=9% Similarity=-0.002 Sum_probs=147.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC----CCCCCC---CeEEEEECCCCCEEEEEeCC---------CeEEEEECCCCeEEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP----LSPPPR---STIAAAFSPDGKTLASTHGD---------HTVKIIDCQTGSCLK 143 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~----L~gH~~---~Vt~lafSPDG~~LaSgS~D---------gtVrVWDl~tg~~l~ 143 (730)
++..+++ +.|++|++||..+++ +.+|.. .|.+++|||||++|++++.+ +.|++||+.+++. .
T Consensus 27 dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~ 104 (723)
T 1xfd_A 27 DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-Q 104 (723)
T ss_dssp SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-E
T ss_pred CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-E
Confidence 3344444 678899999998763 344544 49999999999999999874 7888999999875 3
Q ss_pred EEe---cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-CCC------------------eEEEEEcC
Q 004785 144 VLH---GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRP------------------IASIAFHA 201 (730)
Q Consensus 144 ~l~---gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h-~~~------------------V~sVafSP 201 (730)
.+. +|...+..++|+| +++.|++++. +.|++||+.+++....... ... +.+++|+|
T Consensus 105 ~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp 182 (723)
T 1xfd_A 105 SLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP 182 (723)
T ss_dssp ECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT
T ss_pred eccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC
Confidence 443 3445588999999 8888888776 7899999999887766542 222 37899999
Q ss_pred CCCEEEEEECC-----------------------------------eEEEEEcCCCccccCCeEEec------CCCCeEE
Q 004785 202 SGELLAVASGH-----------------------------------KLYIWRYNMREETSSPRIVLR------TRRSLRA 240 (730)
Q Consensus 202 dG~~LAsgSdd-----------------------------------~I~VWDl~t~~~~~~~~~l~~------h~~~V~s 240 (730)
||++|++++.+ .|++||+.+++... .+.. +...+..
T Consensus 183 Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~---~l~~~~~~~~~~~~~~~ 259 (723)
T 1xfd_A 183 DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL---EMMPPDDPRMREYYITM 259 (723)
T ss_dssp TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE---ECCCCCCGGGSSEEEEE
T ss_pred CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE---EeeCCccCCCccceeEE
Confidence 99999988721 58999998776321 2222 2567899
Q ss_pred EEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCC--ceeeeEecCCCEE
Q 004785 241 VHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPP--FLRPSFVRDDERI 318 (730)
Q Consensus 241 VaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slp--il~p~FSpDg~rI 318 (730)
++|+|||+++++......- ...+.+++..++....+.......... ...+.|||||++|
T Consensus 260 ~~~SpDg~~l~~~~~~~~~-------------------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 260 VKWATSTKVAVTWLNRAQN-------------------VSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp EEESSSSEEEEEEEETTSC-------------------EEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSE
T ss_pred EEEeCCCeEEEEEEcCCCC-------------------eEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeE
Confidence 9999999976555431100 013444444443332222111111111 1257999999999
Q ss_pred EEE
Q 004785 319 SLQ 321 (730)
Q Consensus 319 ~~~ 321 (730)
++.
T Consensus 321 ~~~ 323 (723)
T 1xfd_A 321 FFI 323 (723)
T ss_dssp EEE
T ss_pred EEE
Confidence 885
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.67 E-value=3e-15 Score=174.01 Aligned_cols=237 Identities=11% Similarity=0.033 Sum_probs=159.9
Q ss_pred EEecCCCEEEEEeC-CC-----eEEEEeCCCCC----CCCCC------------------------CCeEEEEECCCCCE
Q 004785 76 AGRDARRGLASWVE-AE-----SLHHLRPKYCP----LSPPP------------------------RSTIAAAFSPDGKT 121 (730)
Q Consensus 76 a~~d~g~~L~Sgs~-Dg-----sIrlWd~~t~~----L~gH~------------------------~~Vt~lafSPDG~~ 121 (730)
+.+.+++.|++++. |+ .|++||..+++ +..+. ..|.+++|||||++
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~ 122 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR 122 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSE
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE
Confidence 33457788888887 87 89999998763 22222 23789999999999
Q ss_pred EEEEeCCCeEEEEECCCCe--EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCC------
Q 004785 122 LASTHGDHTVKIIDCQTGS--CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRP------ 193 (730)
Q Consensus 122 LaSgS~DgtVrVWDl~tg~--~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~------ 193 (730)
|++++. +.|++||+.++. .+..+..|...+..++|+| ++++|++++ ++.|++||+.+++..........
T Consensus 123 l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~ 199 (741)
T 2ecf_A 123 LLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGI 199 (741)
T ss_dssp EEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESC
T ss_pred EEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccc
Confidence 999987 899999999883 4556777888899999999 889888887 45899999999887765443221
Q ss_pred -----------eEEEEEcCCCCEEEEEE-CC---------------------------------eEEEEEcCC-CccccC
Q 004785 194 -----------IASIAFHASGELLAVAS-GH---------------------------------KLYIWRYNM-REETSS 227 (730)
Q Consensus 194 -----------V~sVafSPdG~~LAsgS-dd---------------------------------~I~VWDl~t-~~~~~~ 227 (730)
+.+++|+|||++|++++ ++ .|++||+.+ ++...
T Consensus 200 ~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~- 278 (741)
T 2ecf_A 200 AEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW- 278 (741)
T ss_dssp CCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE-
T ss_pred cceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE-
Confidence 47899999999988886 32 588899887 65422
Q ss_pred CeEEe--cCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCC-
Q 004785 228 PRIVL--RTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITP- 304 (730)
Q Consensus 228 ~~~l~--~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~sl- 304 (730)
... .|...+..++| |||++|+++.....-. ...+.+++..++....+.........
T Consensus 279 --~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~------------------~~~i~~~d~~~g~~~~~~~~~~~~~~~ 337 (741)
T 2ecf_A 279 --IDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQK------------------KLDLVEVTLASNQQRVLAHETSPTWVP 337 (741)
T ss_dssp --ECCCSCSSEEEEEEEE-EETTEEEEEEEETTSS------------------EEEEEEEETTTCCEEEEEEEECSSCCC
T ss_pred --ecCCCCcceEEEEEEe-CCCCEEEEEEecccCC------------------eEEEEEEECCCCceEEEEEcCCCCcCC
Confidence 111 46678999999 9999888765421100 01344444444333222222111111
Q ss_pred CceeeeEecCCCEEEEEecCCCCCcccceeecCCC
Q 004785 305 PFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSS 339 (730)
Q Consensus 305 pil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss 339 (730)
....+.|+|||+.++.. +.+....++..+.++.
T Consensus 338 ~~~~~~~spdg~~~~~~--~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSS--ERTGFQHLYRIDSKGK 370 (741)
T ss_dssp CCSCCEECTTSCEEEEE--CTTSSCEEEEECSSSC
T ss_pred cCCceEECCCCeEEEEe--cCCCccEEEEEcCCCC
Confidence 22367899999944432 2233345555554433
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.66 E-value=1.5e-14 Score=165.27 Aligned_cols=237 Identities=12% Similarity=0.055 Sum_probs=167.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC----CC-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC--CCCeEEEEEecCCCCc
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP----LS-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDC--QTGSCLKVLHGHRRTP 152 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~----L~-gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl--~tg~~l~~l~gH~~~V 152 (730)
.+..+++...|++|.+||..+++ +. ++. +..++|+|||++|++++.|++|++||+ .+++.+..+.. ...+
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p 224 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEA 224 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEE
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCc
Confidence 45678888899999999998874 33 333 899999999999999999999999999 89999888884 4568
Q ss_pred EEEEEccC---CCCEEEEEe-CCCcEEEEECCCCeEEEEecC------------CCCeEEEEEcCCCCEEEEEE--CCeE
Q 004785 153 WVVRFHPL---NPTIIASGS-LDHEVRLWNASTAECIGSRDF------------YRPIASIAFHASGELLAVAS--GHKL 214 (730)
Q Consensus 153 ~sVafSP~---dg~lLaSgS-~DgtVrLWDl~tg~~i~~l~h------------~~~V~sVafSPdG~~LAsgS--dd~I 214 (730)
..++|+|. +++++++++ .+++|.+||..+++++..+.. ...+.++.|+|++..+++.. ++.|
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 99999981 345555555 689999999999998887642 22789999999988766665 4559
Q ss_pred EEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe------eCCccCCCcceeEec----cCCcc-c-------
Q 004785 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLAT----SPGYW-R------- 276 (730)
Q Consensus 215 ~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs------vwdl~s~~~~~~l~t----~sG~~-~------- 276 (730)
.+||+.+.+... .....+...+..+.|+|||+++++++. +||...++....+.. +.+.. .
T Consensus 305 ~vvd~~~~~~l~--~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g 382 (543)
T 1nir_A 305 LLVNYKDIDNLT--VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYG 382 (543)
T ss_dssp EEEECTTSSSCE--EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTE
T ss_pred EEEEecCCCcce--eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCc
Confidence 999998765422 123456677899999999998877653 777776655544443 21110 0
Q ss_pred --C-----CCCeEEEecCCCCCC----CCcccccCCCCCCceeeeEecCCCEEEEE
Q 004785 277 --Y-----PPPVICMAGAHSSSH----PGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 277 --~-----p~~~V~l~d~~s~d~----~~L~~~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
+ ....|.+++..+... ..............+.+.|+||+++|++.
T Consensus 383 ~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~ 438 (543)
T 1nir_A 383 PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVD 438 (543)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEEC
T ss_pred cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEe
Confidence 0 113455665544211 11111111222344568899999999983
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.65 E-value=2.1e-14 Score=148.50 Aligned_cols=175 Identities=13% Similarity=0.075 Sum_probs=127.8
Q ss_pred EEEEeCCCeEEEEeCC-CCC-----CCCCCCCeEEEEECCCCCEEEEEeCC-CeEEEEECC--CCe--EEEEEecCCCCc
Q 004785 84 LASWVEAESLHHLRPK-YCP-----LSPPPRSTIAAAFSPDGKTLASTHGD-HTVKIIDCQ--TGS--CLKVLHGHRRTP 152 (730)
Q Consensus 84 L~Sgs~DgsIrlWd~~-t~~-----L~gH~~~Vt~lafSPDG~~LaSgS~D-gtVrVWDl~--tg~--~l~~l~gH~~~V 152 (730)
+++...++.|++|++. ++. ...|...+.+++|+|+|++|++++.+ +.|++|++. +++ .+..+..+. .+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL 86 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence 3344678999999885 231 23567789999999999999998886 999999997 555 344555544 78
Q ss_pred EEEEEccCCCCEEEEEe-CCCcEEEEECC---CCeEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCC-Cccc
Q 004785 153 WVVRFHPLNPTIIASGS-LDHEVRLWNAS---TAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNM-REET 225 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS-~DgtVrLWDl~---tg~~i~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t-~~~~ 225 (730)
..++|+| +++++++++ .++.|++||+. +.+.+..+.....+.+++|+|+|++|++++ ++.|++||+.+ ++..
T Consensus 87 ~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 87 THISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp SEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 9999999 777665555 58899999994 444555566666789999999999888876 56699999987 4321
Q ss_pred cCC--eEEecCCCCeEEEEEccCCCeEEEEEe------eCCcc
Q 004785 226 SSP--RIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLD 260 (730)
Q Consensus 226 ~~~--~~l~~h~~~V~sVaFSPdG~~Llatgs------vwdl~ 260 (730)
... .........+..++|+|+|+++++++. +|+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 100 112223457889999999998877653 66664
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=6.1e-14 Score=146.17 Aligned_cols=242 Identities=11% Similarity=0.032 Sum_probs=164.3
Q ss_pred EEEecCCCEEEEEeC-------CCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCeEEE
Q 004785 75 EAGRDARRGLASWVE-------AESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLK 143 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~-------DgsIrlWd~~t~~L~---gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~ 143 (730)
.+...+++.++.... ++.|.+||..++++. .....+..++|+|||++++.+ ..++.|.+||..+++.+.
T Consensus 46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 125 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKG 125 (353)
T ss_dssp EEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEE
Confidence 344456666666653 568999999876421 223457789999999966555 457999999999999988
Q ss_pred EEecCCCC---------cEEEEEccCCCCEEEEEe--CCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC
Q 004785 144 VLHGHRRT---------PWVVRFHPLNPTIIASGS--LDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG 211 (730)
Q Consensus 144 ~l~gH~~~---------V~sVafSP~dg~lLaSgS--~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd 211 (730)
.+..+... +..++|+| ++++++.++ .++.|.+||+.+++.+..+. +...+..++|+|+|++|++++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 126 RLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA 204 (353)
T ss_dssp EEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT
T ss_pred EEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC
Confidence 88765433 68899999 666655554 58899999999999988887 5666889999999999998884
Q ss_pred -CeEEEEEcCCCccccCCeEEe----cCCCCeEEEEEccCCCeEEEEEe------eCCccCCCcceeEeccCC-------
Q 004785 212 -HKLYIWRYNMREETSSPRIVL----RTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLATSPG------- 273 (730)
Q Consensus 212 -d~I~VWDl~t~~~~~~~~~l~----~h~~~V~sVaFSPdG~~Llatgs------vwdl~s~~~~~~l~t~sG------- 273 (730)
+.|.+||+.+++... .+. ++...+..++|+|+|++++++.. +|+...++....+.....
T Consensus 205 ~~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~ 281 (353)
T 3vgz_A 205 DGELITIDTADNKILS---RKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNP 281 (353)
T ss_dssp TSEEEEEETTTTEEEE---EEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEET
T ss_pred CCeEEEEECCCCeEEE---EEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECC
Confidence 559999999887543 222 24556888999999998777653 556655544333332111
Q ss_pred --ccc----CCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecC
Q 004785 274 --YWR----YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (730)
Q Consensus 274 --~~~----~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~ 324 (730)
..- .....+.+++..+......... ......++|++||+.|++...+
T Consensus 282 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 282 ARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT----PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTTEEEEEEEC----CSEEEEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEEECCCCeEEEEECCCCeEEEEEec----CCCCCeEEEcCCCCEEEEEEcc
Confidence 100 0123445555443332221111 1123468999999998885554
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.64 E-value=7.2e-14 Score=159.60 Aligned_cols=243 Identities=11% Similarity=0.045 Sum_probs=173.4
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeC--CCCC----CCCCCCCeEEEEECC----CCCEEEEEeC-CCeEEEEECCCCeEE
Q 004785 74 FEAGRDARRGLASWVEAESLHHLRP--KYCP----LSPPPRSTIAAAFSP----DGKTLASTHG-DHTVKIIDCQTGSCL 142 (730)
Q Consensus 74 l~a~~d~g~~L~Sgs~DgsIrlWd~--~t~~----L~gH~~~Vt~lafSP----DG~~LaSgS~-DgtVrVWDl~tg~~l 142 (730)
.++...+++.|++++.|++|.+||+ .+.+ +. +...+..++|+| ||++|++++. +++|.|||..+++++
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~ 261 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 261 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc
Confidence 4445668889999999999999999 6652 33 445689999999 9999999985 899999999999999
Q ss_pred EEEecC----------C-CCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEE--EecCCCCeEEEEEcCCCCEEEEE
Q 004785 143 KVLHGH----------R-RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG--SRDFYRPIASIAFHASGELLAVA 209 (730)
Q Consensus 143 ~~l~gH----------~-~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~--~l~h~~~V~sVafSPdG~~LAsg 209 (730)
..+..+ . ..+..+.++|++..++++...+++|.+||+.+.+.+. .+.+...+..++|+|+|++|+++
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEE
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEE
Confidence 888652 2 2688999999667778888899999999998876544 45666778899999999988777
Q ss_pred E--CCeEEEEEcCCCccccCCeEEe----cCCCCeEEEEEccCCCeEEEEEe-------eCCccC-------CCcceeEe
Q 004785 210 S--GHKLYIWRYNMREETSSPRIVL----RTRRSLRAVHFHPHAAPLLLTAE-------VNDLDS-------SESSLTLA 269 (730)
Q Consensus 210 S--dd~I~VWDl~t~~~~~~~~~l~----~h~~~V~sVaFSPdG~~Llatgs-------vwdl~s-------~~~~~~l~ 269 (730)
+ +++|.+||+.+++... .+. .|......+ ++|++..++++++ +|+++. ++....+.
T Consensus 342 ~~~~~~v~v~D~~tg~l~~---~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 342 ANNSNKVAVIDSKDRRLSA---LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EGGGTEEEEEETTTTEEEE---EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred ecCCCeEEEEECCCCeEEE---eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE
Confidence 6 4679999999987644 222 244333333 5788555555542 788776 55555555
Q ss_pred ccCCc---ccCC------------------CCeEEEecCCCCCCC-Ccc-c----ccCCCCCCceeeeEecCCCEEEEE
Q 004785 270 TSPGY---WRYP------------------PPVICMAGAHSSSHP-GLA-E----EVPLITPPFLRPSFVRDDERISLQ 321 (730)
Q Consensus 270 t~sG~---~~~p------------------~~~V~l~d~~s~d~~-~L~-~----~~~~~slpil~p~FSpDg~rI~~~ 321 (730)
+..+. +.+. ...|.+++..+.+.. ... . +.....-..+.+.|++||+.+.+.
T Consensus 418 ~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s 496 (543)
T 1nir_A 418 GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 496 (543)
T ss_dssp CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEE
T ss_pred cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEE
Confidence 54322 1111 126777777766654 221 0 012223456689999999999984
No 139
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=176.30 Aligned_cols=238 Identities=12% Similarity=0.060 Sum_probs=154.4
Q ss_pred EEEEEeCCCeEEEEeCCCCC---C-CCCCC---CeEEEEECCCCCEEEEEeC---------CCeEEEEECCCCeEE--EE
Q 004785 83 GLASWVEAESLHHLRPKYCP---L-SPPPR---STIAAAFSPDGKTLASTHG---------DHTVKIIDCQTGSCL--KV 144 (730)
Q Consensus 83 ~L~Sgs~DgsIrlWd~~t~~---L-~gH~~---~Vt~lafSPDG~~LaSgS~---------DgtVrVWDl~tg~~l--~~ 144 (730)
.++....|++|++||..+++ + .+|.. .+.+++|||||++|++++. |+.|++||+.+++.+ ..
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~ 107 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE 107 (719)
T ss_dssp EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee
Confidence 34444568999999998873 2 22322 4899999999999999877 789999999999862 22
Q ss_pred EecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCCe-----------------EEEEEcCCCCE
Q 004785 145 LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPI-----------------ASIAFHASGEL 205 (730)
Q Consensus 145 l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~--h~~~V-----------------~sVafSPdG~~ 205 (730)
+ ...+..++|+| +++.|+++. |++|++||+.+++...... +...| .+++|+|||++
T Consensus 108 l---~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~ 182 (719)
T 1z68_A 108 L---PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF 182 (719)
T ss_dssp C---CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE
T ss_pred c---CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE
Confidence 2 24688899999 888888875 7899999999887765432 22222 48999999999
Q ss_pred EEEEECC-----------------------------------eEEEEEcCCCccc---c--CCeEEecCCCCeEEEEEcc
Q 004785 206 LAVASGH-----------------------------------KLYIWRYNMREET---S--SPRIVLRTRRSLRAVHFHP 245 (730)
Q Consensus 206 LAsgSdd-----------------------------------~I~VWDl~t~~~~---~--~~~~l~~h~~~V~sVaFSP 245 (730)
|++++.+ .|++||+.+++.. . .+..+..|...+..++|+|
T Consensus 183 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp 262 (719)
T 1z68_A 183 LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT 262 (719)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS
T ss_pred EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC
Confidence 9988732 5889999887642 1 0011235777899999999
Q ss_pred CCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEec----CCCCCCCCccc---ccCCCCCC---ceeeeEecCC
Q 004785 246 HAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAG----AHSSSHPGLAE---EVPLITPP---FLRPSFVRDD 315 (730)
Q Consensus 246 dG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d----~~s~d~~~L~~---~~~~~slp---il~p~FSpDg 315 (730)
|++.+++.....+-. ..+.+++ ..++....+.. ........ ...+.|+|||
T Consensus 263 D~~~~~~~~~~~~~~-------------------~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 263 DERVCLQWLKRVQNV-------------------SVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp SSEEEEEEEESSTTE-------------------EEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCeEEEEEeccccCe-------------------EEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCC
Confidence 987444322211000 1344444 33333333331 11111111 1167899999
Q ss_pred CEEEEEecCCCCCcccceeecCCCcceee
Q 004785 316 ERISLQHTEHDSGATRTQQSLRSSSSVRL 344 (730)
Q Consensus 316 ~rI~~~~~~~dsgs~~~~~~~~ss~~~~l 344 (730)
+.|++...+.+.-..++..++.+....+|
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~~~~l 352 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVENAIQI 352 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTTCEEC
T ss_pred CeEEEEEEccCCceEEEEEECCCCceEec
Confidence 99887544444444566666655544433
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.63 E-value=2.3e-14 Score=165.87 Aligned_cols=240 Identities=9% Similarity=-0.032 Sum_probs=157.3
Q ss_pred EEEecCCCEEEEEeCC---------CeEEEEeCCCCC---CC---CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q 004785 75 EAGRDARRGLASWVEA---------ESLHHLRPKYCP---LS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG 139 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~D---------gsIrlWd~~t~~---L~---gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg 139 (730)
.+.+.+++.|+++..+ +.|.+||+.+++ +. +|...+..++|||||++|++++. +.|++||+.++
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g 144 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGK 144 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSS
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCC
Confidence 3344567777777664 778899998774 33 44455899999999999999986 79999999999
Q ss_pred eEEEEEecCCCCc------------------EEEEEccCCCCEEEEEeCCC-----------------------------
Q 004785 140 SCLKVLHGHRRTP------------------WVVRFHPLNPTIIASGSLDH----------------------------- 172 (730)
Q Consensus 140 ~~l~~l~gH~~~V------------------~sVafSP~dg~lLaSgS~Dg----------------------------- 172 (730)
+.......+...+ ..++|+| +++.|++++.|+
T Consensus 145 ~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 223 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGS 223 (723)
T ss_dssp CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTS
T ss_pred ceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCC
Confidence 8777666554444 7899999 888888877553
Q ss_pred -----cEEEEECCCCeEEEEec-C------CCCeEEEEEcCCCCEEEEEEC---C--eEEEEEcCCCccccCCeEE-ecC
Q 004785 173 -----EVRLWNASTAECIGSRD-F------YRPIASIAFHASGELLAVASG---H--KLYIWRYNMREETSSPRIV-LRT 234 (730)
Q Consensus 173 -----tVrLWDl~tg~~i~~l~-h------~~~V~sVafSPdG~~LAsgSd---d--~I~VWDl~t~~~~~~~~~l-~~h 234 (730)
+|++||+.+++....+. + ...+..++|+|||++|++.++ + .|++||+.+++... .. ..+
T Consensus 224 ~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~---~~~~~~ 300 (723)
T 1xfd_A 224 ENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK---KHEDES 300 (723)
T ss_dssp CCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE---EEEEEC
T ss_pred CCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE---EEEecc
Confidence 79999999887544433 2 457889999999998877752 1 39999998876432 22 223
Q ss_pred CCCe----EEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEec-CCCCCC--CCcccccCCCCCCce
Q 004785 235 RRSL----RAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAG-AHSSSH--PGLAEEVPLITPPFL 307 (730)
Q Consensus 235 ~~~V----~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d-~~s~d~--~~L~~~~~~~slpil 307 (730)
...+ ..++|+|||++|+..+...+-... ....+.+++ ...+.. ...... ......
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~---------------~~~~l~~~d~~~~~~~~~~~~l~~---~~~~~~ 362 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG---------------KFYHITVSSSQPNSSNDNIQSITS---GDWDVT 362 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEEEEEECCSSSS---------------CEEEEEEECSSCCSSSCCCCBSCC---SSSCEE
T ss_pred CCEEeccCCCceEcCCCCeEEEEEecccCCCc---------------ceeEEEEEeccCCCCccceeEeec---CCeEEE
Confidence 3333 378999999988876332111000 001344454 222220 111111 112233
Q ss_pred -eeeEecCCCEEEEEecCCC-CCcccceeecC
Q 004785 308 -RPSFVRDDERISLQHTEHD-SGATRTQQSLR 337 (730)
Q Consensus 308 -~p~FSpDg~rI~~~~~~~d-sgs~~~~~~~~ 337 (730)
.+.|+|||++|++....+. ....++..+..
T Consensus 363 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 363 KILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred eeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 4799999999998665532 22334444443
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.63 E-value=1.3e-14 Score=168.61 Aligned_cols=228 Identities=10% Similarity=0.088 Sum_probs=153.8
Q ss_pred CCCeEEEEECCCCCEEEEEeC-CC-----eEEEEECCCCeEEEEEecCCCC------------------------cEEEE
Q 004785 107 PRSTIAAAFSPDGKTLASTHG-DH-----TVKIIDCQTGSCLKVLHGHRRT------------------------PWVVR 156 (730)
Q Consensus 107 ~~~Vt~lafSPDG~~LaSgS~-Dg-----tVrVWDl~tg~~l~~l~gH~~~------------------------V~sVa 156 (730)
...+.+++|||||++|++++. |+ +|++||+.+++....+..+... |..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456999999999999999998 88 9999999999887777655433 78999
Q ss_pred EccCCCCEEEEEeCCCcEEEEECCCC---eEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEEec
Q 004785 157 FHPLNPTIIASGSLDHEVRLWNASTA---ECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~tg---~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~~l~~ 233 (730)
|+| ++++|++++. ++|++||+.++ +......+...+..++|+|||++|++++++.|++||+.+++... ....
T Consensus 116 ~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~---~~~~ 190 (741)
T 2ecf_A 116 WSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ---LTAD 190 (741)
T ss_dssp ECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE---CCCC
T ss_pred ECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE---eccC
Confidence 999 8898888876 89999999988 66555667788999999999999999998899999998876432 1222
Q ss_pred CCCC----------------eEEEEEccCCCeEEEEEeeCCccC-C-------C---cceeEeccCCcccCCCCeEEEec
Q 004785 234 TRRS----------------LRAVHFHPHAAPLLLTAEVNDLDS-S-------E---SSLTLATSPGYWRYPPPVICMAG 286 (730)
Q Consensus 234 h~~~----------------V~sVaFSPdG~~Llatgsvwdl~s-~-------~---~~~~l~t~sG~~~~p~~~V~l~d 286 (730)
+... +..+.|||||++|+++........ . + .........|. ......+.+++
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~-~~~~~~l~~~d 269 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGD-ANVQVKLGVIS 269 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTS-CCCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCC-CCCeeEEEEEE
Confidence 2221 478999999999888765321100 0 0 00000001111 00112566677
Q ss_pred CCC-CCCCCcccccCCCCCCceeeeEecCCCEEEEEecC-CCCCcccceeecCCCcce
Q 004785 287 AHS-SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE-HDSGATRTQQSLRSSSSV 342 (730)
Q Consensus 287 ~~s-~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~-~dsgs~~~~~~~~ss~~~ 342 (730)
..+ +....+... ......+..+.| |||++|++...+ ......++.+++.+....
T Consensus 270 ~~~~~~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 270 PAEQAQTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR 325 (741)
T ss_dssp SSTTCCCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE
T ss_pred CCCCCceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE
Confidence 655 443222211 112223447899 999999986542 222345566666554433
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.62 E-value=3.4e-14 Score=164.41 Aligned_cols=234 Identities=14% Similarity=0.117 Sum_probs=162.7
Q ss_pred cCCCEEEEEeCCCeEEEEeCCC-----CC----CCCCCCC--------------eEEEEECCCCCEEEEEe---------
Q 004785 79 DARRGLASWVEAESLHHLRPKY-----CP----LSPPPRS--------------TIAAAFSPDGKTLASTH--------- 126 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t-----~~----L~gH~~~--------------Vt~lafSPDG~~LaSgS--------- 126 (730)
.+++.|+.. .++.|.+|++.+ +. ...+... +.++.|||||++|++++
T Consensus 130 pdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~ 208 (706)
T 2z3z_A 130 PVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPT 208 (706)
T ss_dssp TTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCE
T ss_pred CCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceE
Confidence 456667764 679999999987 63 2223332 48999999999999998
Q ss_pred ------------------------CCCeEEEEECCCCeEEEEEe--cCCCCcEEEEEccCCCCEEEEEeCCC-----cEE
Q 004785 127 ------------------------GDHTVKIIDCQTGSCLKVLH--GHRRTPWVVRFHPLNPTIIASGSLDH-----EVR 175 (730)
Q Consensus 127 ------------------------~DgtVrVWDl~tg~~l~~l~--gH~~~V~sVafSP~dg~lLaSgS~Dg-----tVr 175 (730)
.+..|++||+.+++...... .|...+..++|+| +++.+++++.|+ .|+
T Consensus 209 ~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~ 287 (706)
T 2z3z_A 209 PIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVN 287 (706)
T ss_dssp EEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEE
T ss_pred EeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEE
Confidence 44789999999988655442 4667789999999 888888877775 899
Q ss_pred EEECCCC-eEEEEec--CCC---CeEEEEEcC--CCCEEEEEECC-eEEEEEcC-CCccccCCeEEecCCCCeEE-EEEc
Q 004785 176 LWNASTA-ECIGSRD--FYR---PIASIAFHA--SGELLAVASGH-KLYIWRYN-MREETSSPRIVLRTRRSLRA-VHFH 244 (730)
Q Consensus 176 LWDl~tg-~~i~~l~--h~~---~V~sVafSP--dG~~LAsgSdd-~I~VWDl~-t~~~~~~~~~l~~h~~~V~s-VaFS 244 (730)
+||+.++ +...... ... .+..++|+| ||++|++++.+ .++||+++ .++.. ..+..+...+.. ++|+
T Consensus 288 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~---~~l~~~~~~v~~~~~~s 364 (706)
T 2z3z_A 288 AYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLI---RQVTKGEWEVTNFAGFD 364 (706)
T ss_dssp EEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEE---EECCCSSSCEEEEEEEC
T ss_pred EEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEE---EecCCCCeEEEeeeEEc
Confidence 9999998 4433332 222 246789999 99998888744 47888776 33322 245567777877 7999
Q ss_pred cCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecC
Q 004785 245 PHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (730)
Q Consensus 245 PdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~ 324 (730)
|||+.+++++...... ...+..++..++....+. . ......+.|||||++|++...+
T Consensus 365 pdg~~l~~~~~~~~~~------------------~~~l~~~d~~~~~~~~l~-~----~~~~~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 365 PKGTRLYFESTEASPL------------------ERHFYCIDIKGGKTKDLT-P----ESGMHRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp TTSSEEEEEESSSCTT------------------CBEEEEEETTCCCCEESC-C----SSSEEEEEECTTSSEEEEEEEC
T ss_pred CCCCEEEEEecCCCCc------------------eEEEEEEEcCCCCceecc-C----CCceEEEEECCCCCEEEEEecC
Confidence 9999888776432100 013444443333221111 1 1234578999999999998777
Q ss_pred CCCCcccceeecCCCc
Q 004785 325 HDSGATRTQQSLRSSS 340 (730)
Q Consensus 325 ~dsgs~~~~~~~~ss~ 340 (730)
...+..++.+++.+..
T Consensus 422 ~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 422 PTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSCSCEEEEEESSSCE
T ss_pred CCCCcEEEEEECCCCe
Confidence 7777788888877655
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.62 E-value=6.7e-14 Score=147.18 Aligned_cols=173 Identities=12% Similarity=0.100 Sum_probs=120.2
Q ss_pred CCCEEEEEeC---CCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECC-CCe--EEEEEe
Q 004785 80 ARRGLASWVE---AESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQ-TGS--CLKVLH 146 (730)
Q Consensus 80 ~g~~L~Sgs~---DgsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS-~DgtVrVWDl~-tg~--~l~~l~ 146 (730)
+++ |+.... ++.|.+|++..+. +..+...+..++|+|||++|++++ .++.|++||+. +++ .+..+.
T Consensus 50 dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~ 128 (347)
T 3hfq_A 50 KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQ 128 (347)
T ss_dssp TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEE
T ss_pred CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceee
Confidence 444 554443 6889999987653 234677889999999999999888 68999999996 333 333332
Q ss_pred cC---------CCCcEEEEEccCCCCEEEEEeCCCcEEEEECC-CCeEEEE----ecCCCCeEEEEEcCCCCEEEEEE--
Q 004785 147 GH---------RRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-TAECIGS----RDFYRPIASIAFHASGELLAVAS-- 210 (730)
Q Consensus 147 gH---------~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~-tg~~i~~----l~h~~~V~sVafSPdG~~LAsgS-- 210 (730)
.. ...+.+++|+| +++++++...++.|++||+. +++.... ......+..++|+|||++|++++
T Consensus 129 ~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 207 (347)
T 3hfq_A 129 HSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL 207 (347)
T ss_dssp CCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred cCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC
Confidence 21 22478899999 66777777778999999998 5554322 12334678899999999888776
Q ss_pred CCeEEEEEcCC--CccccCCeEEecCC------CCeEEEEEccCCCeEEEEEe
Q 004785 211 GHKLYIWRYNM--REETSSPRIVLRTR------RSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 211 dd~I~VWDl~t--~~~~~~~~~l~~h~------~~V~sVaFSPdG~~Llatgs 255 (730)
++.|++|+++. ++... ........ ..+..++|+|||++++++..
T Consensus 208 ~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 208 SSQIASLKYDTQTGAFTQ-LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp TTEEEEEEEETTTTEEEE-EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEEEecCCCCceEE-eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 34599999875 32211 11122222 45889999999998866553
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.62 E-value=1.4e-13 Score=142.92 Aligned_cols=177 Identities=12% Similarity=0.098 Sum_probs=128.1
Q ss_pred EEEecCCCEEEEEe-CCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEECCCCeEEEEE
Q 004785 75 EAGRDARRGLASWV-EAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDH---TVKIIDCQTGSCLKVL 145 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs-~DgsIrlWd~~t~~L-----~gH~~~Vt~lafSPDG~~LaSgS~Dg---tVrVWDl~tg~~l~~l 145 (730)
.+...+++.++... .++.|.+||..++++ ..+.....+++|+|||++|+++..++ .|++||+.+++.+..+
T Consensus 45 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~ 124 (331)
T 3u4y_A 45 TAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI 124 (331)
T ss_dssp EEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEE
Confidence 34444555555554 488999999987754 23444555599999999999554442 9999999999988887
Q ss_pred ecCCCCcEEEEEccCCCC-EEEEEeCCCc-EEEEECCCCeEE-----EEecCCCCeEEEEEcCCCCEEEEEE--CCeEEE
Q 004785 146 HGHRRTPWVVRFHPLNPT-IIASGSLDHE-VRLWNASTAECI-----GSRDFYRPIASIAFHASGELLAVAS--GHKLYI 216 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~-lLaSgS~Dgt-VrLWDl~tg~~i-----~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~V 216 (730)
..+ ..+..++|+| +++ ++++...++. |.+|++.....+ ..+........++|+|||++|++++ ++.|++
T Consensus 125 ~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 202 (331)
T 3u4y_A 125 PIP-YDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGI 202 (331)
T ss_dssp ECC-TTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ECC-CCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEE
Confidence 754 4478999999 665 6666677788 999998764332 2234556789999999999877776 455999
Q ss_pred EEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 217 WRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
||+.+++.... .........+..++|+|||++++++.
T Consensus 203 ~d~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 203 LETQNPENITL-LNAVGTNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp EECSSTTSCEE-EEEEECSSCCCCEEECTTSSEEEEEC
T ss_pred EECCCCcccce-eeeccCCCCCceEEECCCCCEEEEEE
Confidence 99988765110 12333456788999999999877654
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.61 E-value=1.3e-14 Score=160.82 Aligned_cols=148 Identities=10% Similarity=0.009 Sum_probs=121.0
Q ss_pred EEEEecCCCEEE----EEeCCCeEEEEeCCCC---------------CCCCCCCCeEEEEECCC-CCEEEEEeCCCeEEE
Q 004785 74 FEAGRDARRGLA----SWVEAESLHHLRPKYC---------------PLSPPPRSTIAAAFSPD-GKTLASTHGDHTVKI 133 (730)
Q Consensus 74 l~a~~d~g~~L~----Sgs~DgsIrlWd~~t~---------------~L~gH~~~Vt~lafSPD-G~~LaSgS~DgtVrV 133 (730)
.++....+..|+ +++.|++|++||+.+. .+.+|...|.+++|+|+ +.+|++++.|++|++
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence 344445677888 7889999999997532 35679999999999997 889999999999999
Q ss_pred EECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-C-------CCCeEEEEEcCCCCE
Q 004785 134 IDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-F-------YRPIASIAFHASGEL 205 (730)
Q Consensus 134 WDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h-------~~~V~sVafSPdG~~ 205 (730)
||++++..+....+|...|.+++|+| ++++|++|+.|++|++||++ ++....+. + ...|.+++|++++.+
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 99999987777788999999999999 89999999999999999998 55544432 1 237899999999988
Q ss_pred EEEEE--CC------eEEEEEcCCCc
Q 004785 206 LAVAS--GH------KLYIWRYNMRE 223 (730)
Q Consensus 206 LAsgS--dd------~I~VWDl~t~~ 223 (730)
+++.+ ++ .+++||+++.+
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEccCCCccCCCCceEEEEeccCC
Confidence 86654 21 29999998754
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.61 E-value=7.5e-14 Score=143.93 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=113.4
Q ss_pred CEEEEEeCCCeEEEEeCCCCCC----C-CCCC-CeEEEEECCCCCEEE-EEeCCCeEEEEECCCCeEEEEEec-C----C
Q 004785 82 RGLASWVEAESLHHLRPKYCPL----S-PPPR-STIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHG-H----R 149 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~L----~-gH~~-~Vt~lafSPDG~~La-SgS~DgtVrVWDl~tg~~l~~l~g-H----~ 149 (730)
..++++..+++|.+||..++++ . ++.. .+..++|+|||++|+ ++..++.|.+||+.+++.+..+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4678889999999999987632 1 2222 478999999998765 455578999999999998877753 2 1
Q ss_pred CCcEEEEEccCCCCEEEEEe------------CCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEE
Q 004785 150 RTPWVVRFHPLNPTIIASGS------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIW 217 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS------------~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~I~VW 217 (730)
..+..++|+| +++++++++ .++.|.+||+.+++.+..+.....+..++|+|||++|+++ ++.|++|
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~ 159 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVM 159 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEE
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEE
Confidence 2577899999 887777775 5799999999999988887767778899999999988888 5679999
Q ss_pred EcCCCcc
Q 004785 218 RYNMREE 224 (730)
Q Consensus 218 Dl~t~~~ 224 (730)
|+.+++.
T Consensus 160 d~~~~~~ 166 (337)
T 1pby_B 160 DPEAGTL 166 (337)
T ss_dssp ETTTTEE
T ss_pred ECCCCcE
Confidence 9988764
No 147
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=3.9e-14 Score=166.48 Aligned_cols=241 Identities=12% Similarity=0.046 Sum_probs=156.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC----CCCCCC-----CeEEEEECCCCCEEEEEeCC---------CeEEEEECCCCeE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP----LSPPPR-----STIAAAFSPDGKTLASTHGD---------HTVKIIDCQTGSC 141 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~----L~gH~~-----~Vt~lafSPDG~~LaSgS~D---------gtVrVWDl~tg~~ 141 (730)
++..+++. |++|++||..++. +.+|.. ....+.|||||++|++++.+ +.+++||+.+++.
T Consensus 27 dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 27 DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE
Confidence 44666665 8999999998773 344543 23458999999999999886 5667999999985
Q ss_pred EEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCCe-----------------EEEEEcCC
Q 004785 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPI-----------------ASIAFHAS 202 (730)
Q Consensus 142 l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~--h~~~V-----------------~sVafSPd 202 (730)
. .+..|.+.+..++||| +++.|+.+ .|+.|++||+.+++..+... +...+ ..+.||||
T Consensus 105 ~-~l~~~~~~~~~~~~SP-dG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpD 181 (740)
T 4a5s_A 105 I-TEERIPNNTQWVTWSP-VGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN 181 (740)
T ss_dssp C-CSSCCCTTEEEEEECS-STTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT
T ss_pred E-EcccCCCcceeeEECC-CCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCC
Confidence 4 4677788899999999 88888877 46899999999887665432 22222 35899999
Q ss_pred CCEEEEEE-C-C-----------------------------------eEEEEEcCC---CccccCCeEEe------cCCC
Q 004785 203 GELLAVAS-G-H-----------------------------------KLYIWRYNM---REETSSPRIVL------RTRR 236 (730)
Q Consensus 203 G~~LAsgS-d-d-----------------------------------~I~VWDl~t---~~~~~~~~~l~------~h~~ 236 (730)
|++||..+ + . .|++||+.+ ++... ...+. ++..
T Consensus 182 g~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~-~~~l~~~~~~~~~~~ 260 (740)
T 4a5s_A 182 GTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT-SIQITAPASMLIGDH 260 (740)
T ss_dssp SSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC-EEEECCCHHHHTSCE
T ss_pred CCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce-EEEecCCccCCCCCe
Confidence 99999875 1 1 377888877 53111 11122 2667
Q ss_pred CeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCC----CC---CcccccCCCCCC---c
Q 004785 237 SLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSS----HP---GLAEEVPLITPP---F 306 (730)
Q Consensus 237 ~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d----~~---~L~~~~~~~slp---i 306 (730)
.+..++|+|||+.++.......- . ..+.+++..++. +. .+........+. .
T Consensus 261 ~~~~~~wspdg~~~~~~~~r~~~--------------~-----~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (740)
T 4a5s_A 261 YLCDVTWATQERISLQWLRRIQN--------------Y-----SVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321 (740)
T ss_dssp EEEEEEEEETTEEEEEEEESSTT--------------E-----EEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred EEEEEEEeCCCeEEEEEeCCCCC--------------E-----EEEEEEECCCCccccceeEEEEeeeccCCceEccCcC
Confidence 78999999999966544321000 0 123444433333 11 111111111111 2
Q ss_pred eeeeEecCCCEEEEEecCCCCCcccceeecCCCcceeee
Q 004785 307 LRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLL 345 (730)
Q Consensus 307 l~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~~~~l~ 345 (730)
..|.|+|||+.|++...+.+.-..++..++++....+|+
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecc
Confidence 258999999999854444444457788888777766665
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.56 E-value=1.3e-13 Score=159.57 Aligned_cols=235 Identities=12% Similarity=0.105 Sum_probs=153.3
Q ss_pred CEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC-----CeEEEEEecCCCC--
Q 004785 82 RGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-----GSCLKVLHGHRRT-- 151 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~t-----g~~l~~l~gH~~~-- 151 (730)
+.++.. .++.|++||..+++ +..+...+.+++|||||++|+++ .|+.|++||+.+ ++.......+...
T Consensus 93 ~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~ 170 (706)
T 2z3z_A 93 GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLV 170 (706)
T ss_dssp TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEE
T ss_pred CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeE
Confidence 444433 35999999998773 45677789999999999999995 679999999998 8766544444332
Q ss_pred ------------cEEEEEccCCCCEEEEEe---------------------------------CCCcEEEEECCCCeEEE
Q 004785 152 ------------PWVVRFHPLNPTIIASGS---------------------------------LDHEVRLWNASTAECIG 186 (730)
Q Consensus 152 ------------V~sVafSP~dg~lLaSgS---------------------------------~DgtVrLWDl~tg~~i~ 186 (730)
+.++.|+| ++++|++++ .+..|++||+.+++...
T Consensus 171 ~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~ 249 (706)
T 2z3z_A 171 YGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY 249 (706)
T ss_dssp ESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE
T ss_pred cccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe
Confidence 47899999 889888887 44679999999988765
Q ss_pred Ee---cCCCCeEEEEEcCCCCEEEEEE-CC-----eEEEEEcCCCccccCCeEEecCCC---CeEEEEEcc--CCCeEEE
Q 004785 187 SR---DFYRPIASIAFHASGELLAVAS-GH-----KLYIWRYNMREETSSPRIVLRTRR---SLRAVHFHP--HAAPLLL 252 (730)
Q Consensus 187 ~l---~h~~~V~sVafSPdG~~LAsgS-dd-----~I~VWDl~t~~~~~~~~~l~~h~~---~V~sVaFSP--dG~~Lla 252 (730)
.. .+...+..++|+|||++|++++ +. .|++||+.+++.... .....+.. .+..+.|+| ||+++++
T Consensus 250 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~-~~~~~~~~~~~~~~~~~~sp~~dg~~l~~ 328 (706)
T 2z3z_A 250 LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT-LFVETDKHYVEPLHPLTFLPGSNNQFIWQ 328 (706)
T ss_dssp CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE-EEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE-EEEccCCCeECccCCceeecCCCCEEEEE
Confidence 54 3556789999999999888876 33 599999988833221 11112222 246789999 9985544
Q ss_pred EEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCcee-eeEecCCCEEEEEecCCCC-Ccc
Q 004785 253 TAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLR-PSFVRDDERISLQHTEHDS-GAT 330 (730)
Q Consensus 253 tgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~-p~FSpDg~rI~~~~~~~ds-gs~ 330 (730)
+.. ... ..+...+... ...... ......... +.|++|+++|++....+.. ...
T Consensus 329 ~~~-~g~--------------------~~l~~~~~~~-~~~~~l---~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~ 383 (706)
T 2z3z_A 329 SRR-DGW--------------------NHLYLYDTTG-RLIRQV---TKGEWEVTNFAGFDPKGTRLYFESTEASPLERH 383 (706)
T ss_dssp ECT-TSS--------------------CEEEEEETTS-CEEEEC---CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBE
T ss_pred Ecc-CCc--------------------cEEEEEECCC-CEEEec---CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEE
Confidence 321 110 0111111100 000000 011223333 7999999999886654331 246
Q ss_pred cceeecCCCcceeee
Q 004785 331 RTQQSLRSSSSVRLL 345 (730)
Q Consensus 331 ~~~~~~~ss~~~~l~ 345 (730)
++..++.+....+++
T Consensus 384 l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 384 FYCIDIKGGKTKDLT 398 (706)
T ss_dssp EEEEETTCCCCEESC
T ss_pred EEEEEcCCCCceecc
Confidence 677776655544443
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.56 E-value=4.8e-13 Score=139.40 Aligned_cols=174 Identities=11% Similarity=0.078 Sum_probs=135.1
Q ss_pred EEecCCCEEEEEe--CCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEec--
Q 004785 76 AGRDARRGLASWV--EAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG-- 147 (730)
Q Consensus 76 a~~d~g~~L~Sgs--~DgsIrlWd~~t~~----L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g-- 147 (730)
+...+++.++... .++.|.+||..+++ +..+...+.+++|+|||++|++++.++.|.+||..+++.+..+..
T Consensus 147 ~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~ 226 (353)
T 3vgz_A 147 VADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLD 226 (353)
T ss_dssp EEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCC
T ss_pred EECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCC
Confidence 3444555555544 57889999998763 333555688999999999999999999999999999998887764
Q ss_pred --CCCCcEEEEEccCCCCEEEE-EeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCC
Q 004785 148 --HRRTPWVVRFHPLNPTIIAS-GSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMR 222 (730)
Q Consensus 148 --H~~~V~sVafSP~dg~lLaS-gS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~ 222 (730)
+...+..++|+| +++.++. ...++.|.+||+.+++.+..+..... ..++|+|+|++|+++. ++.|.+||..++
T Consensus 227 ~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 227 DGKEHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp SSSCCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 556688899999 6665544 45569999999999998877764443 5699999999877776 455999999888
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+... .......+..++|+|||++++++..
T Consensus 305 ~~~~----~~~~~~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 305 KVVK----TFDTPTHPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp EEEE----EEECCSEEEEEEECTTSCEEEEEEE
T ss_pred eEEE----EEecCCCCCeEEEcCCCCEEEEEEc
Confidence 7543 2334457899999999998777665
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.56 E-value=3.1e-13 Score=164.90 Aligned_cols=169 Identities=9% Similarity=0.002 Sum_probs=142.3
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC---CCCCCCC-CeEEEEECCCCCEEEEEeCCCeEE-EEECCCCeEEEEEecCCCCcE
Q 004785 79 DARRGLASWVEAESLHHLRPKYC---PLSPPPR-STIAAAFSPDGKTLASTHGDHTVK-IIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~---~L~gH~~-~Vt~lafSPDG~~LaSgS~DgtVr-VWDl~tg~~l~~l~gH~~~V~ 153 (730)
.+++.|+.+. ++.|.+|+...+ .+..|.. .+..++|+ ||+.|++++.+..+. +||+.+++.. .+.+|...+.
T Consensus 306 pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~ 382 (1045)
T 1k32_A 306 LDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVF 382 (1045)
T ss_dssp CGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEE
T ss_pred CCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCcccee
Confidence 4556666666 788999998776 3667777 89999999 999999999988999 9999887654 4448888899
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEEC-C----------eEEEEEcCC
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG-H----------KLYIWRYNM 221 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSd-d----------~I~VWDl~t 221 (730)
.++|+| ++++|++++.|+.|++||+.+++....+ .+...+.+++|+|||++|++++. + .|++||+.+
T Consensus 383 ~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 383 AMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred eeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 999999 9999999999999999999999888776 68888999999999999988763 3 499999988
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
++. ..+..|...+..++|+|||++|++.+.
T Consensus 462 g~~----~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 462 RKI----FAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TEE----EECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CcE----EEeeCCCcccCCceEcCCCCEEEEEec
Confidence 752 245677788999999999998887765
No 151
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.55 E-value=4.7e-13 Score=142.12 Aligned_cols=243 Identities=10% Similarity=0.009 Sum_probs=155.3
Q ss_pred cCCCEEEEEeC-CC--eEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 79 DARRGLASWVE-AE--SLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 79 d~g~~L~Sgs~-Dg--sIrlWd~~t~~----L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
.+++.|+..+. ++ .|.+||+.++. ..++...+..+.|+|||+.|++++.++.|++||+.+++....+..+...
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~ 124 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEW 124 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhc
Confidence 35566666665 56 38888887762 3345555557889999999999999999999999999988777777665
Q ss_pred cEEEEE--ccCCCCEEEEE----------------------eCCCcEEEEECCCCeEEEEecCCCCeEEEEEcC-CCCEE
Q 004785 152 PWVVRF--HPLNPTIIASG----------------------SLDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SGELL 206 (730)
Q Consensus 152 V~sVaf--SP~dg~lLaSg----------------------S~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSP-dG~~L 206 (730)
+....| +| ++.+++.. ..+..|++||+.+++......+...+..+.|+| ||+.|
T Consensus 125 ~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l 203 (388)
T 3pe7_A 125 VGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTV 203 (388)
T ss_dssp EEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEE
T ss_pred ccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEE
Confidence 544444 78 77777642 244679999999998877777778899999999 99988
Q ss_pred EEEECC-------eEEEEEcCCCccccCCeEEecCC--CCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccC
Q 004785 207 AVASGH-------KLYIWRYNMREETSSPRIVLRTR--RSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRY 277 (730)
Q Consensus 207 AsgSdd-------~I~VWDl~t~~~~~~~~~l~~h~--~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~ 277 (730)
+....+ .|+++|...+... .+..+. ..+..+.|+|||+.|+..+....-.
T Consensus 204 ~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~----------------- 262 (388)
T 3pe7_A 204 AFCHEGPHDLVDARMWLINEDGTNMR----KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSP----------------- 262 (388)
T ss_dssp EEEECSCTTTSSCSEEEEETTSCCCE----ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCC-----------------
T ss_pred EEEEecCCCCCcceEEEEeCCCCceE----EeeeCCCCcccccceECCCCCEEEEEecCCCCC-----------------
Confidence 887732 3888887665432 233333 3578899999999887765421100
Q ss_pred CCCeEEEecCCCCCCCCcccccCCCCCC---ceeeeEecCCCEEEEEecCC-----CCCcccceeecCCCcceeee
Q 004785 278 PPPVICMAGAHSSSHPGLAEEVPLITPP---FLRPSFVRDDERISLQHTEH-----DSGATRTQQSLRSSSSVRLL 345 (730)
Q Consensus 278 p~~~V~l~d~~s~d~~~L~~~~~~~slp---il~p~FSpDg~rI~~~~~~~-----dsgs~~~~~~~~ss~~~~l~ 345 (730)
...+.+++..++....+.... ..... .-...|+|||++|++...+. .....++.+++.+....+|+
T Consensus 263 -~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 263 -DRFIYSADPETLENRQLTSMP-ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp -CEEEEEECTTTCCEEEEEEEC-CEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEE
T ss_pred -cceEEEEecCCCceEEEEcCC-CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEec
Confidence 012444444433322221110 00000 00137999999999854321 33446777777665555443
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.55 E-value=3.5e-13 Score=139.85 Aligned_cols=143 Identities=13% Similarity=0.088 Sum_probs=110.2
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCC----CCC-CCCeEEEEECCCCCEEEE-EeCCCeEEEEECCCCeEEEEEecCC---
Q 004785 79 DARRGLASWVEAESLHHLRPKYCPL----SPP-PRSTIAAAFSPDGKTLAS-THGDHTVKIIDCQTGSCLKVLHGHR--- 149 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~~L----~gH-~~~Vt~lafSPDG~~LaS-gS~DgtVrVWDl~tg~~l~~l~gH~--- 149 (730)
.++..+++...+++|.+||..++++ ..+ ...+..++|+|||++++. ...++.|++||+.+++.+..+..+.
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 4667788899999999999987632 222 225789999999987654 4568999999999999887776432
Q ss_pred ---CCcEEEEEccCCCCEEEEEeCC------------CcEEEEECCCCe---EEEEecCCCCeEEEEEcCCCCEEEEEEC
Q 004785 150 ---RTPWVVRFHPLNPTIIASGSLD------------HEVRLWNASTAE---CIGSRDFYRPIASIAFHASGELLAVASG 211 (730)
Q Consensus 150 ---~~V~sVafSP~dg~lLaSgS~D------------gtVrLWDl~tg~---~i~~l~h~~~V~sVafSPdG~~LAsgSd 211 (730)
..+..++|+| +++++++++.+ +.|.+||+.+++ .+..+.+...+.+++|+|||+ |+++ +
T Consensus 89 ~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~-~ 165 (349)
T 1jmx_B 89 EVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA-G 165 (349)
T ss_dssp EEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE-S
T ss_pred cccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEc-c
Confidence 2378899999 88888887765 899999998854 334455566788999999999 5554 4
Q ss_pred CeEEEEEcCCCcc
Q 004785 212 HKLYIWRYNMREE 224 (730)
Q Consensus 212 d~I~VWDl~t~~~ 224 (730)
+.|++||+.+++.
T Consensus 166 ~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 166 PDIYKMDVKTGKY 178 (349)
T ss_dssp SSEEEECTTTCCE
T ss_pred CcEEEEeCCCCce
Confidence 4499999988764
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.54 E-value=9.1e-14 Score=161.36 Aligned_cols=175 Identities=10% Similarity=0.075 Sum_probs=126.4
Q ss_pred EEecCCCEEEEEeC---------CCeEEEEeCCCCCC---CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Q 004785 76 AGRDARRGLASWVE---------AESLHHLRPKYCPL---SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK 143 (730)
Q Consensus 76 a~~d~g~~L~Sgs~---------DgsIrlWd~~t~~L---~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~ 143 (730)
+.+.+++.|+.++. ++.|++||+.+++. ......+..++|||||++|+++. |++|++||+.+++...
T Consensus 66 ~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 66 GLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred EECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE
Confidence 34456777776665 68999999988765 44456789999999999999986 7899999999887654
Q ss_pred EE-ecCCCCc-----------------EEEEEccCCCCEEEEEeCCC---------------------------------
Q 004785 144 VL-HGHRRTP-----------------WVVRFHPLNPTIIASGSLDH--------------------------------- 172 (730)
Q Consensus 144 ~l-~gH~~~V-----------------~sVafSP~dg~lLaSgS~Dg--------------------------------- 172 (730)
.. .++...| ..++|+| +++.|++++.|.
T Consensus 145 l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~ 223 (719)
T 1z68_A 145 ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPV 223 (719)
T ss_dssp CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCE
T ss_pred EecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCe
Confidence 32 2332222 4899999 889998887652
Q ss_pred -cEEEEECCCCeEE---EE------ecCCCCeEEEEEcCCCCEEEEEEC--C---eEEEEE----cCCCccccCCe-EEe
Q 004785 173 -EVRLWNASTAECI---GS------RDFYRPIASIAFHASGELLAVASG--H---KLYIWR----YNMREETSSPR-IVL 232 (730)
Q Consensus 173 -tVrLWDl~tg~~i---~~------l~h~~~V~sVafSPdG~~LAsgSd--d---~I~VWD----l~t~~~~~~~~-~l~ 232 (730)
+|++||+.+++.+ .. ..+...+..++|+|||+++++..+ . .|++|| +.+++...... ...
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~ 303 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEE 303 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccc
Confidence 7899999987652 21 136667899999999887777542 1 288999 76665433110 013
Q ss_pred cCCCCeE-----EEEEccCCCeEEE
Q 004785 233 RTRRSLR-----AVHFHPHAAPLLL 252 (730)
Q Consensus 233 ~h~~~V~-----sVaFSPdG~~Lla 252 (730)
.|...+. .+.|+|||+.++.
T Consensus 304 ~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 304 SRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp CSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred cCCceEccccCCccEECCCCCeEEE
Confidence 5666666 8899999997766
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.54 E-value=4.6e-13 Score=138.00 Aligned_cols=167 Identities=17% Similarity=0.125 Sum_probs=120.7
Q ss_pred cCCCE-EEEEeCCCeEEEEeCCCCCCC-----CC----CCCeEEEEECCCCCEEEEEe------------CCCeEEEEEC
Q 004785 79 DARRG-LASWVEAESLHHLRPKYCPLS-----PP----PRSTIAAAFSPDGKTLASTH------------GDHTVKIIDC 136 (730)
Q Consensus 79 d~g~~-L~Sgs~DgsIrlWd~~t~~L~-----gH----~~~Vt~lafSPDG~~LaSgS------------~DgtVrVWDl 136 (730)
.+++. +++...++.|.+||..+++.. ++ ...+.+++|+|||++|+++. .++.|++||+
T Consensus 43 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~ 122 (337)
T 1pby_B 43 PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDA 122 (337)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEET
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEEC
Confidence 34444 456667889999999876421 11 12677899999999999886 5799999999
Q ss_pred CCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC-------------------------
Q 004785 137 QTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------------------------- 191 (730)
Q Consensus 137 ~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~------------------------- 191 (730)
.+++.+..+.. ...+..++|+| ++++++++ ++.|++||+.+++.+..+...
T Consensus 123 ~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 198 (337)
T 1pby_B 123 ETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVM 198 (337)
T ss_dssp TTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEE
T ss_pred CCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCce
Confidence 99998887765 45578899999 77766666 688999999988776544311
Q ss_pred ------------------------------------------CCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCe
Q 004785 192 ------------------------------------------RPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPR 229 (730)
Q Consensus 192 ------------------------------------------~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~ 229 (730)
..+.+++|+|||++|+++ ++.|++||+.+++...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~--- 274 (337)
T 1pby_B 199 ATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIK--- 274 (337)
T ss_dssp EEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEE---
T ss_pred eeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcc---
Confidence 123457888888888777 5668888887765433
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEE
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
.......+.+++|+|||+++++++
T Consensus 275 -~~~~~~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 275 -RVPLPHSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp -EEECSSCCCEEEECTTSCEEEEES
T ss_pred -eecCCCceeeEEECCCCCEEEEEc
Confidence 222334677888888888766653
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.53 E-value=3.2e-13 Score=164.73 Aligned_cols=238 Identities=8% Similarity=-0.017 Sum_probs=163.4
Q ss_pred CCCEEEEEeCCCeEE-EEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 80 ARRGLASWVEAESLH-HLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIr-lWd~~t~---~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
++..|+.++.+..+. +|+..++ .+.+|...+..++|||||++|++++.++.|++||+.+++....+.+|.+.+..+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF 426 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccce
Confidence 445677777777888 8898765 355788899999999999999999999999999999999888888899999999
Q ss_pred EEccCCCCEEEEEeCCC----------cEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCcc
Q 004785 156 RFHPLNPTIIASGSLDH----------EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREE 224 (730)
Q Consensus 156 afSP~dg~lLaSgS~Dg----------tVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~ 224 (730)
+|+| +++++++++.++ .|++||+.+++......+...+..++|+|||++|+++++. ...+|+......
T Consensus 427 ~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~ 505 (1045)
T 1k32_A 427 TISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNF 505 (1045)
T ss_dssp EECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCE
T ss_pred EECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccc
Confidence 9999 888888876644 8999999998855556677888999999999999988853 355555322111
Q ss_pred ----------------------------------------ccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCc
Q 004785 225 ----------------------------------------TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSES 264 (730)
Q Consensus 225 ----------------------------------------~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~ 264 (730)
......+..+...+..+.|+|||+++++........
T Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~---- 581 (1045)
T 1k32_A 506 SFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA---- 581 (1045)
T ss_dssp ECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHH----
T ss_pred ccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccc----
Confidence 001112233556788999999997666422100000
Q ss_pred ceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCCc
Q 004785 265 SLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSS 340 (730)
Q Consensus 265 ~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~ 340 (730)
.... ..+ ....+..++..++....+. .......||+||++|++...+ ....+++.+..
T Consensus 582 -~~~~-~~~----~~~~l~~~d~~~~~~~~l~-------~~v~~~~~S~DG~~l~~~~~~-----~i~~~d~~~~~ 639 (1045)
T 1k32_A 582 -AYYQ-GAP----EKGVLLKYDVKTRKVTEVK-------NNLTDLRLSADRKTVMVRKDD-----GKIYTFPLEKP 639 (1045)
T ss_dssp -HHHH-CCC----CCEEEEEEETTTCCEEEEE-------EEEEEEEECTTSCEEEEEETT-----SCEEEEESSCT
T ss_pred -cccc-ccC----CCceEEEEECCCCcEEEee-------cCcceEEECCCCCEEEEEcCC-----cEEEEeCccCc
Confidence 0000 000 0124555554444322222 123467899999999986443 35566665443
No 156
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=1.4e-12 Score=134.75 Aligned_cols=175 Identities=11% Similarity=0.094 Sum_probs=123.7
Q ss_pred EEecCCCEEEEEeCC-CeEEEEeCC--CCC------CCCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECC---CCeEE
Q 004785 76 AGRDARRGLASWVEA-ESLHHLRPK--YCP------LSPPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQ---TGSCL 142 (730)
Q Consensus 76 a~~d~g~~L~Sgs~D-gsIrlWd~~--t~~------L~gH~~~Vt~lafSPDG~~LaSgS~-DgtVrVWDl~---tg~~l 142 (730)
+...++..|+.+..+ +.|.+|++. ++. +..+ ..+..++|+|+|++|++++. ++.|++||+. +++.+
T Consensus 44 ~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 44 VVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred EECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc
Confidence 334466777777766 899999987 443 2222 37889999999998877765 8899999994 34455
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEe-CCCcEEEEECCC-CeEEE------EecCCCCeEEEEEcCCCCEEEEEE--CC
Q 004785 143 KVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNAST-AECIG------SRDFYRPIASIAFHASGELLAVAS--GH 212 (730)
Q Consensus 143 ~~l~gH~~~V~sVafSP~dg~lLaSgS-~DgtVrLWDl~t-g~~i~------~l~h~~~V~sVafSPdG~~LAsgS--dd 212 (730)
..+..+ ..+.+++|+| +++++++++ .|+.|++||+.+ ++... .......+..++|+|+|++|++++ ++
T Consensus 123 ~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 123 DVVEGL-DGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ccccCC-CCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 555544 4588999999 777777666 899999999987 65432 122445788999999999887766 45
Q ss_pred eEEEEEcCC--CccccCCeEEe------cCCCCeEEEEEccCCCeEEEEE
Q 004785 213 KLYIWRYNM--REETSSPRIVL------RTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 213 ~I~VWDl~t--~~~~~~~~~l~------~h~~~V~sVaFSPdG~~Llatg 254 (730)
.|++||++. ++... ..... .....+..++|+|+|++++++.
T Consensus 201 ~i~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 201 SVDVWELKDPHGNIEC-VQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp EEEEEESSCTTSCCEE-EEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEecCCCCcEEE-EeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 599999964 22110 11111 1134577899999999887665
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.53 E-value=3.3e-13 Score=158.56 Aligned_cols=225 Identities=8% Similarity=0.027 Sum_probs=149.0
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCc-----EEEEEccCCCCEEEEEeCC---------CcEE
Q 004785 110 TIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP-----WVVRFHPLNPTIIASGSLD---------HEVR 175 (730)
Q Consensus 110 Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V-----~sVafSP~dg~lLaSgS~D---------gtVr 175 (730)
...+.|+|||++|+++ |++|++||+.++++...+.+|.... ..++||| +++.++.++.+ +.+.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccceEEE
Confidence 5689999999998886 8999999999999888888876432 3478999 88988888876 5667
Q ss_pred EEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEEecCCCCe-----------------
Q 004785 176 LWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTRRSL----------------- 238 (730)
Q Consensus 176 LWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~~l~~h~~~V----------------- 238 (730)
+||+.+++......+...+..++|||||+.||.+.++.|++||+.+++... ....++...+
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~--lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR--ITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE--CCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE--EcCCCCccceecCcccccccchhcCCC
Confidence 999999988776667788999999999999999999899999998776432 0111222112
Q ss_pred EEEEEccCCCeEEEEEee------CCccCCCc-----c---eeEeccCCcccCCCCeEEEecCCC---CCCCCcccccC-
Q 004785 239 RAVHFHPHAAPLLLTAEV------NDLDSSES-----S---LTLATSPGYWRYPPPVICMAGAHS---SSHPGLAEEVP- 300 (730)
Q Consensus 239 ~sVaFSPdG~~Llatgsv------wdl~s~~~-----~---~~l~t~sG~~~~p~~~V~l~d~~s---~d~~~L~~~~~- 300 (730)
..+.|||||++|+..... |.+..... . .......|.. .+...+.+++..+ ++.........
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~-~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV-NPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC-CCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc-CCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 358999999988876542 22110000 0 0000111211 1112467778766 53211111111
Q ss_pred ----CCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCCc
Q 004785 301 ----LITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSS 340 (730)
Q Consensus 301 ----~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~ 340 (730)
+...-+..+.|||||+.+++..++......+..+++.+..
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 1112234799999999877766655444556666666544
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.51 E-value=2.8e-13 Score=153.66 Aligned_cols=166 Identities=11% Similarity=0.070 Sum_probs=119.7
Q ss_pred EecCCCEEEEEeC-CCeEEEEeCCCC---CCCCCC-CCeEEEEECCCCCEEEEEeC---CCeEEEEECCC---CeEEEEE
Q 004785 77 GRDARRGLASWVE-AESLHHLRPKYC---PLSPPP-RSTIAAAFSPDGKTLASTHG---DHTVKIIDCQT---GSCLKVL 145 (730)
Q Consensus 77 ~~d~g~~L~Sgs~-DgsIrlWd~~t~---~L~gH~-~~Vt~lafSPDG~~LaSgS~---DgtVrVWDl~t---g~~l~~l 145 (730)
...+|+.|+..+. |+++++|+++.+ ++..|. ..+..++|||| +++++++. +...+||.+.. +... .+
T Consensus 29 ~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l 106 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RL 106 (582)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-EC
T ss_pred cCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cc
Confidence 3447778887776 999999998765 355665 58999999999 77777765 45455554432 3322 44
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECC-----eEEEEEcC
Q 004785 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH-----KLYIWRYN 220 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd-----~I~VWDl~ 220 (730)
.... .+...+|+|++..++++...++.+.+||+.+++......+.. .+++|+|||++|++++.+ .|++||+.
T Consensus 107 ~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~ 183 (582)
T 3o4h_A 107 EAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS 183 (582)
T ss_dssp TTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETT
T ss_pred cCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCC
Confidence 3332 355678999444455555555556699999998777665544 789999999999977632 39999998
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEE
Q 004785 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLL 251 (730)
Q Consensus 221 t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Ll 251 (730)
+++. ..+..+...+..++|||||++|+
T Consensus 184 ~g~~----~~l~~~~~~~~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 184 SGGL----RVFDSGEGSFSSASISPGMKVTA 210 (582)
T ss_dssp TCCC----EEECCSSCEEEEEEECTTSCEEE
T ss_pred CCCc----eEeecCCCccccceECCCCCEEE
Confidence 8764 24677888899999999999887
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.51 E-value=1e-12 Score=138.16 Aligned_cols=147 Identities=11% Similarity=0.146 Sum_probs=103.7
Q ss_pred CCCCCeEEEEECCCCCEEEEEeC---CCeEEEEECCCCe--EEEEEecCCCCcEEEEEccCCCCEEEEEe-CCCcEEEEE
Q 004785 105 PPPRSTIAAAFSPDGKTLASTHG---DHTVKIIDCQTGS--CLKVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWN 178 (730)
Q Consensus 105 gH~~~Vt~lafSPDG~~LaSgS~---DgtVrVWDl~tg~--~l~~l~gH~~~V~sVafSP~dg~lLaSgS-~DgtVrLWD 178 (730)
.+...+..++|+|||+ |++++. ++.|++||+.+++ .+..+..+...+..++|+| +++++++++ .+++|.+||
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEE
Confidence 3556778899999999 655554 6899999998776 4455556778899999999 888777777 789999999
Q ss_pred CC-CCe--EEEEecCC----------CCeEEEEEcCCCCEEEEEE-CCeEEEEEcC-CCccccCCeE-EecCCCCeEEEE
Q 004785 179 AS-TAE--CIGSRDFY----------RPIASIAFHASGELLAVAS-GHKLYIWRYN-MREETSSPRI-VLRTRRSLRAVH 242 (730)
Q Consensus 179 l~-tg~--~i~~l~h~----------~~V~sVafSPdG~~LAsgS-dd~I~VWDl~-t~~~~~~~~~-l~~h~~~V~sVa 242 (730)
+. +++ .+..+.+. ..+.+++|+|||+++++.. ++.|++||+. .++... ... .......+..++
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSE-QSVLTMEAGFGPRHLV 193 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEE-EEEEECCTTCCEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEE-eeeEEcCCCCCCceEE
Confidence 96 333 23333222 2488999999999444433 4459999998 333211 111 122344688999
Q ss_pred EccCCCeEEEEE
Q 004785 243 FHPHAAPLLLTA 254 (730)
Q Consensus 243 FSPdG~~Llatg 254 (730)
|+|||++++++.
T Consensus 194 ~spdg~~l~v~~ 205 (347)
T 3hfq_A 194 FSPDGQYAFLAG 205 (347)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEe
Confidence 999999777765
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.47 E-value=1.1e-12 Score=136.15 Aligned_cols=167 Identities=13% Similarity=0.115 Sum_probs=121.1
Q ss_pred ecCCCEE-EEEeCCCeEEEEeCCCCCC----C-CC-----CCCeEEEEECCCCCEEEEEeCC------------CeEEEE
Q 004785 78 RDARRGL-ASWVEAESLHHLRPKYCPL----S-PP-----PRSTIAAAFSPDGKTLASTHGD------------HTVKII 134 (730)
Q Consensus 78 ~d~g~~L-~Sgs~DgsIrlWd~~t~~L----~-gH-----~~~Vt~lafSPDG~~LaSgS~D------------gtVrVW 134 (730)
..+++.+ ++...++.|.+||..+++. . .+ ...+.+++|+|||++|++++.+ +.|.+|
T Consensus 51 s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~ 130 (349)
T 1jmx_B 51 APDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 130 (349)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred CCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEE
Confidence 3344544 5556789999999987632 1 22 2237899999999999999865 899999
Q ss_pred ECCCCe---EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-------------------
Q 004785 135 DCQTGS---CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR------------------- 192 (730)
Q Consensus 135 Dl~tg~---~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~------------------- 192 (730)
|+.+++ .+..+..+ ..+.+++|+| +++ ++.++ +.|++||+.+++.+..+....
T Consensus 131 d~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (349)
T 1jmx_B 131 STADGLEAKPVRTFPMP-RQVYLMRAAD-DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQS 205 (349)
T ss_dssp EGGGGGGBCCSEEEECC-SSCCCEEECT-TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCC
T ss_pred ECCCccccceeeeccCC-CcccceeECC-CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCC
Confidence 998854 33445444 3588999999 777 44444 349999999988776553221
Q ss_pred --------------------------------------------------CeEEEEEcC-CCCEEEEEECCeEEEEEcCC
Q 004785 193 --------------------------------------------------PIASIAFHA-SGELLAVASGHKLYIWRYNM 221 (730)
Q Consensus 193 --------------------------------------------------~V~sVafSP-dG~~LAsgSdd~I~VWDl~t 221 (730)
.+..++|+| ||++|+++ ++.|++||+.+
T Consensus 206 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~ 284 (349)
T 1jmx_B 206 PRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQ 284 (349)
T ss_dssp TTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTT
T ss_pred cceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECcc
Confidence 345677889 99999988 77799999988
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
++... .......+..++|+|+|++|++++
T Consensus 285 ~~~~~----~~~~~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 285 RKLIK----AANLDHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp TEEEE----EEECSSCCCEEEECSSSSCEEEES
T ss_pred CeEEE----EEcCCCCccceEECCCCCEEEEec
Confidence 76533 222345678999999999888754
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.46 E-value=2.8e-12 Score=136.19 Aligned_cols=216 Identities=12% Similarity=0.073 Sum_probs=144.0
Q ss_pred CCCCCCCeEE-----EEECCCCCEEEEEeC-CC--eEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcE
Q 004785 103 LSPPPRSTIA-----AAFSPDGKTLASTHG-DH--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEV 174 (730)
Q Consensus 103 L~gH~~~Vt~-----lafSPDG~~LaSgS~-Dg--tVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtV 174 (730)
+..|...... .+|||||++|++++. ++ .|.+||+.+++......++...+..+.|+| +++.|+.++.++.|
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l 104 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNL 104 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TSSEEEEEETTTEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeE
Confidence 5556655555 889999999999987 66 489999999988777777776666789999 99999999999999
Q ss_pred EEEECCCCeEEEEecCCC-CeEEEE--EcCCCCEEEEEE-----------------------CCeEEEEEcCCCccccCC
Q 004785 175 RLWNASTAECIGSRDFYR-PIASIA--FHASGELLAVAS-----------------------GHKLYIWRYNMREETSSP 228 (730)
Q Consensus 175 rLWDl~tg~~i~~l~h~~-~V~sVa--fSPdG~~LAsgS-----------------------dd~I~VWDl~t~~~~~~~ 228 (730)
++||+.+++....+.... .+.... ++|+|++|+... +..|++||+.+++..
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~--- 181 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST--- 181 (388)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE---
T ss_pred EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE---
Confidence 999999998776655433 343333 489999887432 134999999887542
Q ss_pred eEEecCCCCeEEEEEcc-CCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCce
Q 004785 229 RIVLRTRRSLRAVHFHP-HAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFL 307 (730)
Q Consensus 229 ~~l~~h~~~V~sVaFSP-dG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil 307 (730)
.+..+...+..+.|+| ||+.|+.+.... -.. ....+.+.+........+..... ...+.
T Consensus 182 -~l~~~~~~~~~~~~sp~dg~~l~~~~~~~-~~~----------------~~~~l~~~d~~~~~~~~l~~~~~--~~~~~ 241 (388)
T 3pe7_A 182 -VILQENQWLGHPIYRPYDDSTVAFCHEGP-HDL----------------VDARMWLINEDGTNMRKVKTHAE--GESCT 241 (388)
T ss_dssp -EEEEESSCEEEEEEETTEEEEEEEEECSC-TTT----------------SSCSEEEEETTSCCCEESCCCCT--TEEEE
T ss_pred -EeecCCccccccEECCCCCCEEEEEEecC-CCC----------------CcceEEEEeCCCCceEEeeeCCC--Ccccc
Confidence 3556677899999999 999887766410 000 01134444433322222221100 01234
Q ss_pred eeeEecCCCEEEEEecCCCCC-cccceeecCCCcce
Q 004785 308 RPSFVRDDERISLQHTEHDSG-ATRTQQSLRSSSSV 342 (730)
Q Consensus 308 ~p~FSpDg~rI~~~~~~~dsg-s~~~~~~~~ss~~~ 342 (730)
.+.|||||++|++........ ..++.+++.+...+
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 689999999998754433221 13566666554433
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.45 E-value=1.6e-11 Score=129.84 Aligned_cols=175 Identities=11% Similarity=0.117 Sum_probs=118.2
Q ss_pred EecCCCEEEEEeCC----CeEEEEeCCC--CC------CCCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCeEEE
Q 004785 77 GRDARRGLASWVEA----ESLHHLRPKY--CP------LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLK 143 (730)
Q Consensus 77 ~~d~g~~L~Sgs~D----gsIrlWd~~t--~~------L~gH~~~Vt~lafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~ 143 (730)
...+++.|++...+ +.|.+|++.. +. +..+......+++ |+++|++++ .++.|.+|++.....+.
T Consensus 57 ~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~ 134 (361)
T 3scy_A 57 PSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALL 134 (361)
T ss_dssp ECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBC
T ss_pred ECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCc
Confidence 34466777777775 7899998654 32 2234556778888 888888776 47899999997543221
Q ss_pred E----E--ec--------CCCCcEEEEEccCCCCEE-EEEeCCCcEEEEECCCCe-------E-------EEEecCCCCe
Q 004785 144 V----L--HG--------HRRTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAE-------C-------IGSRDFYRPI 194 (730)
Q Consensus 144 ~----l--~g--------H~~~V~sVafSP~dg~lL-aSgS~DgtVrLWDl~tg~-------~-------i~~l~h~~~V 194 (730)
. + .+ +...+.+++|+| +++++ ++...++.|++|++.... . .........+
T Consensus 135 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 213 (361)
T 3scy_A 135 PASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGP 213 (361)
T ss_dssp SCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCE
T ss_pred ccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCC
Confidence 1 1 11 122357899999 77755 455568899999887543 1 2223455678
Q ss_pred EEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeEE---ecCCCCeEEEEEccCCCeEEEEEe
Q 004785 195 ASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIV---LRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 195 ~sVafSPdG~~LAsgS--dd~I~VWDl~t~~~~~~~~~l---~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
..++|+|||++|++++ ++.|++||+.+++... .... ..+...+..++|+|||++++++..
T Consensus 214 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~-~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDE-IQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEECTTSSEEEEEETTTCEEEEEEEETTEEEE-EEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred eEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEE-eEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 8999999999988887 4559999998664311 1111 223355789999999998876653
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.45 E-value=2.4e-11 Score=128.60 Aligned_cols=172 Identities=12% Similarity=0.079 Sum_probs=118.1
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCC-CCC-----------------CCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCC
Q 004785 80 ARRGLASWV-EAESLHHLRPKYC-PLS-----------------PPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTG 139 (730)
Q Consensus 80 ~g~~L~Sgs-~DgsIrlWd~~t~-~L~-----------------gH~~~Vt~lafSPDG~~LaSgS~-DgtVrVWDl~tg 139 (730)
+++.|+... .++.|.+|++... .+. .+...+.+++|+|||++|+++.. ++.|++|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 445555554 6889999998642 211 11234688999999997766654 889999988754
Q ss_pred eE------E-------EEEecCCCCcEEEEEccCCCCEEEEEe-CCCcEEEEECCCCeEEEE--ec----CCCCeEEEEE
Q 004785 140 SC------L-------KVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGS--RD----FYRPIASIAF 199 (730)
Q Consensus 140 ~~------l-------~~l~gH~~~V~sVafSP~dg~lLaSgS-~DgtVrLWDl~tg~~i~~--l~----h~~~V~sVaf 199 (730)
.. + .....+...+..++|+| ++++++.++ .++.|.+||+.+++.... +. +......++|
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~ 266 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHL 266 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEE
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEE
Confidence 31 1 11223445678999999 787766665 689999999998765322 21 2345789999
Q ss_pred cCCCCEEEEEEC---CeEEEEEcCC--CccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 200 HASGELLAVASG---HKLYIWRYNM--REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 200 SPdG~~LAsgSd---d~I~VWDl~t--~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
+|||++|+++.. +.|.+|++.. ++... ...+.. ...+..++|+|||++|+++.
T Consensus 267 spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~-~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 267 SPDGKYLYASNRLKADGVAIFKVDETNGTLTK-VGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp CTTSSEEEEEECSSSCEEEEEEECTTTCCEEE-EEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE-eeEecC-CCCCceEEECCCCCEEEEEE
Confidence 999999987764 3499999963 33211 112222 55788999999999888776
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.43 E-value=6.5e-12 Score=134.36 Aligned_cols=179 Identities=11% Similarity=0.045 Sum_probs=123.0
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCC-CCCCC---CCC--CCeEEEEECCCCCE--EEEEe-------------CCCeEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPK-YCPLS---PPP--RSTIAAAFSPDGKT--LASTH-------------GDHTVKI 133 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~-t~~L~---gH~--~~Vt~lafSPDG~~--LaSgS-------------~DgtVrV 133 (730)
++...+++.|+++..+ .|.+|++. ++++. .+. +.+..++|+|||++ ++++. .++++.+
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 3444567778888777 89999986 55321 111 23567899999994 45553 6899999
Q ss_pred EECC-CCeEEEEEe----cCCCCcEEEEEccCCCCEEEEEe-CCCcEEEEECC-CCeEEE--Eec---CCCCeEEEEEcC
Q 004785 134 IDCQ-TGSCLKVLH----GHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNAS-TAECIG--SRD---FYRPIASIAFHA 201 (730)
Q Consensus 134 WDl~-tg~~l~~l~----gH~~~V~sVafSP~dg~lLaSgS-~DgtVrLWDl~-tg~~i~--~l~---h~~~V~sVafSP 201 (730)
|++. +++....+. .+...+..++|+| ++++++++. .++.|++||+. +++... .+. +...+..++|+|
T Consensus 124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred EccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 9997 466554443 2556799999999 788777665 46899999998 776532 232 356789999999
Q ss_pred CCCEEEEEEC--CeEEEEEcCC--CccccCCeEEe-------cCCC------CeEEEE-EccCCCeEEEEEe
Q 004785 202 SGELLAVASG--HKLYIWRYNM--REETSSPRIVL-------RTRR------SLRAVH-FHPHAAPLLLTAE 255 (730)
Q Consensus 202 dG~~LAsgSd--d~I~VWDl~t--~~~~~~~~~l~-------~h~~------~V~sVa-FSPdG~~Llatgs 255 (730)
||++|++++. +.|.+|+++. ++.......+. ++.. .+..++ |+|||++|+++..
T Consensus 203 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 203 TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 9999988873 4599998763 33210000111 1122 588999 9999998876654
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.40 E-value=7.2e-12 Score=143.76 Aligned_cols=234 Identities=10% Similarity=0.036 Sum_probs=150.4
Q ss_pred CCE-EEEE-eCCCeEEEEeCC--C-C---CCCC-----CCCCeEEEEECCCCCEEEEEeCC----------CeEEEEECC
Q 004785 81 RRG-LASW-VEAESLHHLRPK--Y-C---PLSP-----PPRSTIAAAFSPDGKTLASTHGD----------HTVKIIDCQ 137 (730)
Q Consensus 81 g~~-L~Sg-s~DgsIrlWd~~--t-~---~L~g-----H~~~Vt~lafSPDG~~LaSgS~D----------gtVrVWDl~ 137 (730)
++. |+.. ..+..|.+|+.. . + ++.. |...+..++|||||+.|++++.| ..|++||+.
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 169 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLD 169 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETT
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECC
Confidence 444 4433 335678888876 2 3 3555 66778999999999999999887 589999998
Q ss_pred C------CeEEEEEe-cCCCCcEEEEEccCCCCEEEEEeCC--------CcEEEEECC-CC---eEEEEec-CCCCeEEE
Q 004785 138 T------GSCLKVLH-GHRRTPWVVRFHPLNPTIIASGSLD--------HEVRLWNAS-TA---ECIGSRD-FYRPIASI 197 (730)
Q Consensus 138 t------g~~l~~l~-gH~~~V~sVafSP~dg~lLaSgS~D--------gtVrLWDl~-tg---~~i~~l~-h~~~V~sV 197 (730)
+ ++ ...+. .+...+..++|+| +++.|+.++.+ .+|++||+. ++ +...... +...+..+
T Consensus 170 ~~~~~~~~~-~~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~ 247 (662)
T 3azo_A 170 GSAAADRSA-VRELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQA 247 (662)
T ss_dssp STTTTCGGG-SEESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEE
T ss_pred CCccccCCc-eeEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcce
Confidence 8 55 44555 5566788899999 88888877754 379999999 57 4444444 46789999
Q ss_pred EEcCCCCEEEEEEC-C--eEEEEEcCCCccccCCeEEecCCCC---------eEEEEEccCCCeEEEEEeeCCccCCCcc
Q 004785 198 AFHASGELLAVASG-H--KLYIWRYNMREETSSPRIVLRTRRS---------LRAVHFHPHAAPLLLTAEVNDLDSSESS 265 (730)
Q Consensus 198 afSPdG~~LAsgSd-d--~I~VWDl~t~~~~~~~~~l~~h~~~---------V~sVaFSPdG~~Llatgsvwdl~s~~~~ 265 (730)
+|+|||++++++.. + .|++||+.+++... +..+... +..++|+|+++.+++... ...
T Consensus 248 ~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~----l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~------ 316 (662)
T 3azo_A 248 EWAPDGSLIVATDRTGWWNLHRVDPATGAATQ----LCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAA------ 316 (662)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECTTTCCEEE----SSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSC------
T ss_pred EECCCCeEEEEECCCCCeEEEEEECCCCceee----cccccccccCccccccCceEeEeCCCEEEEEEEc-Ccc------
Confidence 99999996666653 3 37777765554322 2222111 567889999885554432 110
Q ss_pred eeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeE-ecCCCEEEEEecCCCCCcccceeecCCCcceee
Q 004785 266 LTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSF-VRDDERISLQHTEHDSGATRTQQSLRSSSSVRL 344 (730)
Q Consensus 266 ~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~F-SpDg~rI~~~~~~~dsgs~~~~~~~~ss~~~~l 344 (730)
.+...+...+....+ .. .... ...+ ++|++.+++...+.+.+..++..++.+....+|
T Consensus 317 ---------------~l~~~d~~~~~~~~l-~~----~~~~-~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 317 ---------------VLGILDPESGELVDA-AG----PWTE-WAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp ---------------EEEEEETTTTEEEEC-CS----SCCE-EEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred ---------------EEEEEECCCCcEEEe-cC----CCCe-EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 111112111110000 00 0011 1233 778999998888888788888888877776666
Q ss_pred eccc
Q 004785 345 LTYS 348 (730)
Q Consensus 345 ~~~~ 348 (730)
+...
T Consensus 376 ~~~~ 379 (662)
T 3azo_A 376 GARH 379 (662)
T ss_dssp ESCC
T ss_pred ecCC
Confidence 5444
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.39 E-value=7.5e-12 Score=132.45 Aligned_cols=203 Identities=8% Similarity=0.009 Sum_probs=133.1
Q ss_pred CeEEEEeCCCCC---CCCCCCC-eEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEE------------
Q 004785 91 ESLHHLRPKYCP---LSPPPRS-TIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV------------ 154 (730)
Q Consensus 91 gsIrlWd~~t~~---L~gH~~~-Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~s------------ 154 (730)
..|.+||..+++ +..+... ...+.|+|||++|+.++.++.|++||+.+++....+..+......
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 139 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKL 139 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcc
Confidence 367888887662 3333333 334889999999999999999999999998876666655442222
Q ss_pred -------EEEccCCCCEEEEE-----eCCCcEEEEECCCCeEEEEecCCCCeEEEEEcC-CCCEEEEEEC-------CeE
Q 004785 155 -------VRFHPLNPTIIASG-----SLDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SGELLAVASG-------HKL 214 (730)
Q Consensus 155 -------VafSP~dg~lLaSg-----S~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSP-dG~~LAsgSd-------d~I 214 (730)
+.|+| +++.++.. ..+..|++||+.+++......+...+..+.|+| +|+.|+..++ ..|
T Consensus 140 ~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l 218 (396)
T 3c5m_A 140 VGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARM 218 (396)
T ss_dssp EEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCC
T ss_pred ccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceE
Confidence 24566 45544433 456789999999998877777778899999999 8887777663 248
Q ss_pred EEEEcCCCccccCCeEEecC--CCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCC
Q 004785 215 YIWRYNMREETSSPRIVLRT--RRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSH 292 (730)
Q Consensus 215 ~VWDl~t~~~~~~~~~l~~h--~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~ 292 (730)
++||+..++.. .+..+ ...+..+.|+|||++|+..+...... ...+.+++..++..
T Consensus 219 ~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~------------------~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 219 WLVNEDGSNVR----KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQT------------------DRVIYKANPETLEN 276 (396)
T ss_dssp EEEETTSCCCE----ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTC------------------CEEEEEECTTTCCE
T ss_pred EEEECCCCcee----EeeccCCCccccceEECCCCCEEEEEecCCCCc------------------cceEEEEECCCCCe
Confidence 88888665422 22222 23578899999999888775432100 01255555444332
Q ss_pred CCcccccCCCCCCceeeeEec-CCCEEEEEe
Q 004785 293 PGLAEEVPLITPPFLRPSFVR-DDERISLQH 322 (730)
Q Consensus 293 ~~L~~~~~~~slpil~p~FSp-Dg~rI~~~~ 322 (730)
..+... +...+.|++ ||+.+++..
T Consensus 277 ~~l~~~------~~~~~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 277 EEVMVM------PPCSHLMSNFDGSLMVGDG 301 (396)
T ss_dssp EEEEEC------CSEEEEEECSSSSEEEEEE
T ss_pred EEeeeC------CCCCCCccCCCCceEEEec
Confidence 222211 112288999 999777643
No 167
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.38 E-value=3e-12 Score=145.22 Aligned_cols=165 Identities=9% Similarity=0.003 Sum_probs=124.5
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEECCCCeEEEEEecCCC
Q 004785 78 RDARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSgS~D----gtVrVWDl~tg~~l~~l~gH~~ 150 (730)
.+++..++....++.+.+||+.+++ +..+.. .+++|||||++|++++.| ..|++||+.+++.. .+..|.+
T Consensus 119 ~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~ 195 (582)
T 3o4h_A 119 DTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEG 195 (582)
T ss_dssp ECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSC
T ss_pred CCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCC
Confidence 3444444444444555599998763 333333 789999999999988877 78999999988754 6788988
Q ss_pred CcEEEEEccCCCCEEEEEeCCC--cEEEEECCCCeEEEEecCCCCeEEEE--------EcCCCCEEEEEE-CCeEEEEEc
Q 004785 151 TPWVVRFHPLNPTIIASGSLDH--EVRLWNASTAECIGSRDFYRPIASIA--------FHASGELLAVAS-GHKLYIWRY 219 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~Dg--tVrLWDl~tg~~i~~l~h~~~V~sVa--------fSPdG~~LAsgS-dd~I~VWDl 219 (730)
.+..++|+| ++++|+++..|+ .|++||+.+++......+...+..++ |+|||.++++++ ++.++||++
T Consensus 196 ~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 196 SFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 899999999 888888888888 89999999988873334555666666 999998888887 556999999
Q ss_pred CCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
++... .....|.+++|+ +|+.+++.+.
T Consensus 275 --g~~~~------~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 275 --GERVE------APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp --TEEEC------CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred --CCeec------cCCCceEEEEec-CCEEEEEEcC
Confidence 44321 234678899999 8886665443
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.38 E-value=2.7e-11 Score=129.60 Aligned_cols=145 Identities=14% Similarity=0.077 Sum_probs=106.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEECC-CCeEEEEEecC-CCCcEEEEEccCCCC--EEEEEe-------------
Q 004785 107 PRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ-TGSCLKVLHGH-RRTPWVVRFHPLNPT--IIASGS------------- 169 (730)
Q Consensus 107 ~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~-tg~~l~~l~gH-~~~V~sVafSP~dg~--lLaSgS------------- 169 (730)
...+..++|+|||++|++++.+ .|.+||+. +++........ .+.+..++|+| +++ ++++++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccceeec
Confidence 3467899999999999999888 99999997 78765443311 13366799999 777 345553
Q ss_pred CCCcEEEEECC-CCeEEEEec-----CCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC-CCccccCCeEEe--cCCCCe
Q 004785 170 LDHEVRLWNAS-TAECIGSRD-----FYRPIASIAFHASGELLAVAS--GHKLYIWRYN-MREETSSPRIVL--RTRRSL 238 (730)
Q Consensus 170 ~DgtVrLWDl~-tg~~i~~l~-----h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~-t~~~~~~~~~l~--~h~~~V 238 (730)
.++++.+|++. +++....+. +...+.+++|+|||++|+++. ++.|++||+. +++... ...+. .+...+
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~g~~p 195 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VGSVDAPDPGDHP 195 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EEEEECSSTTCCE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-eeeEecCCCCCCC
Confidence 68999999997 466543332 456799999999999988876 3569999998 554321 11122 235679
Q ss_pred EEEEEccCCCeEEEEE
Q 004785 239 RAVHFHPHAAPLLLTA 254 (730)
Q Consensus 239 ~sVaFSPdG~~Llatg 254 (730)
+.++|+|||++++++.
T Consensus 196 ~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 196 RWVAMHPTGNYLYALM 211 (365)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred CEeEECCCCCEEEEEE
Confidence 9999999999887665
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.35 E-value=2.5e-11 Score=139.27 Aligned_cols=165 Identities=13% Similarity=0.075 Sum_probs=117.9
Q ss_pred eCCCeEEEEeCC-CC---CCCCCCCCeE---------EEEEC--CCCCE-EEEEeC-CCeEEEEECC--C-CeEEEEEec
Q 004785 88 VEAESLHHLRPK-YC---PLSPPPRSTI---------AAAFS--PDGKT-LASTHG-DHTVKIIDCQ--T-GSCLKVLHG 147 (730)
Q Consensus 88 s~DgsIrlWd~~-t~---~L~gH~~~Vt---------~lafS--PDG~~-LaSgS~-DgtVrVWDl~--t-g~~l~~l~g 147 (730)
..++...+|... .+ ++..|...+. ...|+ |||++ |+.++. +..|++|++. . ++ ...+..
T Consensus 44 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~ 122 (662)
T 3azo_A 44 AEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTP 122 (662)
T ss_dssp TTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSC
T ss_pred ccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccC
Confidence 346778888743 22 4666766666 66665 99998 777655 5677777775 3 43 455655
Q ss_pred -----CCCCcEEEEEccCCCCEEEEEeCC----------CcEEEEECCC------CeEEEEe-cCCCCeEEEEEcCCCCE
Q 004785 148 -----HRRTPWVVRFHPLNPTIIASGSLD----------HEVRLWNAST------AECIGSR-DFYRPIASIAFHASGEL 205 (730)
Q Consensus 148 -----H~~~V~sVafSP~dg~lLaSgS~D----------gtVrLWDl~t------g~~i~~l-~h~~~V~sVafSPdG~~ 205 (730)
|...+..++|+| +++.|++++.| .+|++||+.+ ++..... .+...+..++|||||++
T Consensus 123 ~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~ 201 (662)
T 3azo_A 123 VSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQ 201 (662)
T ss_dssp CCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSE
T ss_pred CccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCE
Confidence 667788999999 88888888776 5899999998 6665555 55667888999999999
Q ss_pred EEEEE-CC--------eEEEEEcC-CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 206 LAVAS-GH--------KLYIWRYN-MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 206 LAsgS-dd--------~I~VWDl~-t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
|+.++ ++ .|++||+. ++...........+...+..+.|+|||+ ++++++
T Consensus 202 la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~ 260 (662)
T 3azo_A 202 AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATD 260 (662)
T ss_dssp EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEEC
T ss_pred EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEEC
Confidence 98776 32 39999998 4521111123344578899999999999 555543
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.32 E-value=2.7e-10 Score=132.97 Aligned_cols=237 Identities=10% Similarity=0.001 Sum_probs=152.4
Q ss_pred EecCCCEEEEEeCCC-----eEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEEeCCCe----------------EE
Q 004785 77 GRDARRGLASWVEAE-----SLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHT----------------VK 132 (730)
Q Consensus 77 ~~d~g~~L~Sgs~Dg-----sIrlWd~~t~~L~---gH~~~Vt~lafSPDG~~LaSgS~Dgt----------------Vr 132 (730)
.+.+++.|+....++ .|++||+.+++.. .....+..++|+|||+.|+.++.++. |+
T Consensus 132 ~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 132 FSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp ECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence 344556666444332 8999999887422 11223678999999999999988766 99
Q ss_pred EEECCCCeE--EEEEec--CCCCcEEEEEccCCCCEEEEEeC-----CCcEEEEECCC------C--eEEEEecCCCCeE
Q 004785 133 IIDCQTGSC--LKVLHG--HRRTPWVVRFHPLNPTIIASGSL-----DHEVRLWNAST------A--ECIGSRDFYRPIA 195 (730)
Q Consensus 133 VWDl~tg~~--l~~l~g--H~~~V~sVafSP~dg~lLaSgS~-----DgtVrLWDl~t------g--~~i~~l~h~~~V~ 195 (730)
+|++.++.. ...+.. |...+..+.|+| ++++|+..+. +..|++||+.+ + +......+...+.
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~ 290 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY 290 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE
Confidence 999988762 233333 455678999999 7777766554 67899999986 5 3344444555555
Q ss_pred EEEEcCCCCEEEEEEC-C----eEEEEEcCCCccccCCeEEecCCC--CeEEEEEccCCCeEEEEEeeCCccCCCcceeE
Q 004785 196 SIAFHASGELLAVASG-H----KLYIWRYNMREETSSPRIVLRTRR--SLRAVHFHPHAAPLLLTAEVNDLDSSESSLTL 268 (730)
Q Consensus 196 sVafSPdG~~LAsgSd-d----~I~VWDl~t~~~~~~~~~l~~h~~--~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l 268 (730)
. .|+|+|+.|+..++ + +|.+||+.++.... ...+..+.. .+..+.|++++. ++++.......
T Consensus 291 ~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~-------- 359 (710)
T 2xdw_A 291 D-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK-WKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKN-------- 359 (710)
T ss_dssp E-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEE--------
T ss_pred E-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-ceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEE--------
Confidence 4 58999998887763 2 39999998764211 234555543 688899986555 55554322111
Q ss_pred eccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCCc
Q 004785 269 ATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSS 340 (730)
Q Consensus 269 ~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~ 340 (730)
.+.+++...+........ ....+..+++++|++.+++...+...+.+++..++.+..
T Consensus 360 ------------~l~~~~~~~g~~~~~l~~---~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 360 ------------TLQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ------------EEEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ------------EEEEEECCCCCEEEecCC---CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 222333211111111111 011233578889999999999999999999999987665
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.29 E-value=9.4e-10 Score=116.16 Aligned_cols=159 Identities=14% Similarity=0.155 Sum_probs=115.0
Q ss_pred CeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe-EEEEE---------ecCCCCcEEE
Q 004785 91 ESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-CLKVL---------HGHRRTPWVV 155 (730)
Q Consensus 91 gsIrlWd~~t~~L-----~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~-~l~~l---------~gH~~~V~sV 155 (730)
++|.+||..++++ .++......++++++|+++++...++.|++||..... .+..+ .++...+..|
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 4799999987643 2455678999999999988888889999999975442 45555 3445578899
Q ss_pred EEccCCCCEEEEEe-CCCcEEEEECCCCeEEEEecCC-----------CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCC
Q 004785 156 RFHPLNPTIIASGS-LDHEVRLWNASTAECIGSRDFY-----------RPIASIAFHASGELLAVAS--GHKLYIWRYNM 221 (730)
Q Consensus 156 afSP~dg~lLaSgS-~DgtVrLWDl~tg~~i~~l~h~-----------~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t 221 (730)
+|+|++++++++.+ .++.|++|| .+++.+..+... .....++++|++..|+++. +++|++||..+
T Consensus 149 a~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 99996788888886 699999999 567777665421 2378999999954444444 45599999987
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEE
Q 004785 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPdG~~Lla 252 (730)
++... ......+...+..++|+| +..+..
T Consensus 228 G~~~~-~~~~~~~~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 228 KEFVR-EIKHASFGRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp CCEEE-EECCTTTTTCEEEEEEET-TEEEEE
T ss_pred CcEEE-EEeccccCCCcceeeecC-CEEEEe
Confidence 76533 111124566789999999 543333
No 172
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.27 E-value=2.6e-10 Score=132.97 Aligned_cols=240 Identities=10% Similarity=-0.025 Sum_probs=152.0
Q ss_pred EecCCCEEE-----EEeCCCeEEEEeCCCCCCC--CCCCCe--EEEEECCCCCEEEEEeCCCe-------------EEEE
Q 004785 77 GRDARRGLA-----SWVEAESLHHLRPKYCPLS--PPPRST--IAAAFSPDGKTLASTHGDHT-------------VKII 134 (730)
Q Consensus 77 ~~d~g~~L~-----Sgs~DgsIrlWd~~t~~L~--gH~~~V--t~lafSPDG~~LaSgS~Dgt-------------VrVW 134 (730)
.+.+++.|+ .|+++..|++||+.++.+. .+...+ ..++|+|||+.|+.++.|.. |++|
T Consensus 128 ~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 128 VSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp ECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred ECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 344556665 3344568999999988543 233333 78999999999999998776 9999
Q ss_pred ECCCCe----EEEEEecCCCCcEEEEEccCCCCEEEEEeCCC----cEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEE
Q 004785 135 DCQTGS----CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH----EVRLWNASTAECIGSRDFYRPIASIAFHASGELL 206 (730)
Q Consensus 135 Dl~tg~----~l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dg----tVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~L 206 (730)
++.++. .+.....|...+..+.|+| ++++++..+.++ .|++||..+++......+...+....| ++|+ |
T Consensus 208 ~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l 284 (695)
T 2bkl_A 208 TLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-F 284 (695)
T ss_dssp ETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-E
T ss_pred ECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-E
Confidence 998876 2333344556788999999 777777666555 788888777766666666666667767 6677 5
Q ss_pred EEEEC-----CeEEEEEcCCCccccCCeEEecC--CCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCC
Q 004785 207 AVASG-----HKLYIWRYNMREETSSPRIVLRT--RRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPP 279 (730)
Q Consensus 207 AsgSd-----d~I~VWDl~t~~~~~~~~~l~~h--~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~ 279 (730)
+..++ .+|++||+.+++... ...+..+ ...+..++|+ ++ .++++...+...
T Consensus 285 ~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~------------------- 342 (695)
T 2bkl_A 285 YVLTDEGAPRQRVFEVDPAKPARAS-WKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATS------------------- 342 (695)
T ss_dssp EEEECTTCTTCEEEEEBTTBCSGGG-CEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEE-------------------
T ss_pred EEEECCCCCCCEEEEEeCCCCCccC-CeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEE-------------------
Confidence 55553 349999997765311 2234443 4567888888 44 455554322111
Q ss_pred CeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCCcceeee
Q 004785 280 PVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLL 345 (730)
Q Consensus 280 ~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~~~~l~ 345 (730)
.+.+.+.. +........ + ....+..+.+++|++.+++...+...+.+++.+++.+.....|.
T Consensus 343 -~l~~~~~~-g~~~~~l~~-~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 343 -EVRVATLK-GKPVRTVQL-P-GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp -EEEEEETT-CCEEEECCC-S-SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred -EEEEEeCC-CCeeEEecC-C-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 11111110 000000000 0 00112256788999999998888888899999998877655554
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.20 E-value=9.4e-11 Score=123.96 Aligned_cols=209 Identities=9% Similarity=0.019 Sum_probs=129.1
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeE
Q 004785 108 RSTIAAAFSPDGKTLASTHGD---HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC 184 (730)
Q Consensus 108 ~~Vt~lafSPDG~~LaSgS~D---gtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~ 184 (730)
..+..++|||||++|+....+ ..|++||+.+++......++......+.|+| +++.|+.++.++.|++||+.+++.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCCc
Confidence 347788999999998887653 4789999998876544443333334488999 899999999999999999999887
Q ss_pred EEEecC-CCCeEE-------------------EEEcCCCCEEEEEE------CCeEEEEEcCCCccccCCeEEecCCCCe
Q 004785 185 IGSRDF-YRPIAS-------------------IAFHASGELLAVAS------GHKLYIWRYNMREETSSPRIVLRTRRSL 238 (730)
Q Consensus 185 i~~l~h-~~~V~s-------------------VafSPdG~~LAsgS------dd~I~VWDl~t~~~~~~~~~l~~h~~~V 238 (730)
...... ...... +.|+|+|+.++... +..|++||+.+++.. .+..+...+
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~----~~~~~~~~~ 190 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE----VIHQDTAWL 190 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE----EEEEESSCE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE----eeccCCccc
Confidence 665542 222222 35678887666542 234999999887642 244567789
Q ss_pred EEEEEcc-CCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCE
Q 004785 239 RAVHFHP-HAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDER 317 (730)
Q Consensus 239 ~sVaFSP-dG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~r 317 (730)
..+.|+| +|+.++.... ..... ....+.+++........+... .....+..+.|+|||++
T Consensus 191 ~~~~~sp~dg~~l~~~~~-~~~~~----------------~~~~l~~~d~~~~~~~~l~~~--~~~~~~~~~~~spdg~~ 251 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHE-GPHDL----------------VDARMWLVNEDGSNVRKIKEH--AEGESCTHEFWIPDGSA 251 (396)
T ss_dssp EEEEEETTEEEEEEEEEC-SCSSS----------------CSCCCEEEETTSCCCEESSCC--CTTEEEEEEEECTTSSC
T ss_pred ccceECCCCCCEEEEEec-CCCCC----------------CCceEEEEECCCCceeEeecc--CCCccccceEECCCCCE
Confidence 9999999 7887776653 11000 001334444332221111110 00112336899999999
Q ss_pred EEEEecCCCC-CcccceeecCCCc
Q 004785 318 ISLQHTEHDS-GATRTQQSLRSSS 340 (730)
Q Consensus 318 I~~~~~~~ds-gs~~~~~~~~ss~ 340 (730)
|++....... ...++.+++.+..
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCC
T ss_pred EEEEecCCCCccceEEEEECCCCC
Confidence 8885443221 1125555554433
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.19 E-value=9.4e-09 Score=107.09 Aligned_cols=174 Identities=9% Similarity=-0.007 Sum_probs=121.6
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCCC----CCCCCeEEEEECCCCCEEEEEeCC----CeEEEEECCCCeEEEEEe--cC
Q 004785 79 DARRGLASWVEAESLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLKVLH--GH 148 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~~L~----gH~~~Vt~lafSPDG~~LaSgS~D----gtVrVWDl~tg~~l~~l~--gH 148 (730)
..+..+++...++.|.+||.+++++. .+...+.+++|+++|+++++...+ +.|.+||..+++....+. .+
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 133 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST 133 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc
Confidence 34555557778899999998876422 456789999999999988877666 689999998877554443 24
Q ss_pred CCCcEEEEEccCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC
Q 004785 149 RRTPWVVRFHPLNPTIIASGSL------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYN 220 (730)
Q Consensus 149 ~~~V~sVafSP~dg~lLaSgS~------DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~ 220 (730)
...+..++++| +++++++... .+.|..||..+++..........+..++|+|+|++|+++. ++.|++||+.
T Consensus 134 ~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 134 AYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp CCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 45789999999 7888877654 3567777776665544444445678999999999777665 4569999996
Q ss_pred CC-ccccCC--eEEe--cCCCCeEEEEEccCCCeEEEE
Q 004785 221 MR-EETSSP--RIVL--RTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 221 t~-~~~~~~--~~l~--~h~~~V~sVaFSPdG~~Llat 253 (730)
+. ...... .... .....+..++++++|+.++++
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 250 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAM 250 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEE
T ss_pred CCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEE
Confidence 42 221100 0111 111467889999999866554
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.17 E-value=2.9e-09 Score=109.68 Aligned_cols=172 Identities=13% Similarity=0.043 Sum_probs=121.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC--CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC----CCCcE
Q 004785 80 ARRGLASWVEAESLHHLRPKYC--PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH----RRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~--~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH----~~~V~ 153 (730)
++..+++...++.|..|+..++ .+..+...+.+++|+++|+++++...++.|.+||..+++........ ...+.
T Consensus 39 g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 118 (296)
T 3e5z_A 39 RSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN 118 (296)
T ss_dssp GTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC
T ss_pred CCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC
Confidence 3336778888899999998765 23456678999999999998887777889999999888765443321 23467
Q ss_pred EEEEccCCCCEEEEEe-----------------CCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEE
Q 004785 154 VVRFHPLNPTIIASGS-----------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLY 215 (730)
Q Consensus 154 sVafSP~dg~lLaSgS-----------------~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~ 215 (730)
.++++| +++++++.+ ..+.|..+|.. ++...........+.++|+|+|+.|++.+ ++.|+
T Consensus 119 ~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 119 DVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATH 196 (296)
T ss_dssp CEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEE
T ss_pred CEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEE
Confidence 899999 888888732 13456666665 55555555667789999999999984444 35699
Q ss_pred EEEcC-CCccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004785 216 IWRYN-MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 216 VWDl~-t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llat 253 (730)
+||+. .+........+..+...+..++++++|+.++++
T Consensus 197 ~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 197 RYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred EEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 99997 333201011222345567789999999865554
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.13 E-value=4e-09 Score=110.19 Aligned_cols=153 Identities=15% Similarity=0.175 Sum_probs=105.3
Q ss_pred CCeEEEEeCCCCCCCCCCCCeEEEEECCCCCEEEEEeCC---C--eEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCE
Q 004785 90 AESLHHLRPKYCPLSPPPRSTIAAAFSPDGKTLASTHGD---H--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTI 164 (730)
Q Consensus 90 DgsIrlWd~~t~~L~gH~~~Vt~lafSPDG~~LaSgS~D---g--tVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~l 164 (730)
+..|.+|+..++....- ..+..+.|||||++|+..+.+ + .|++||+.+++.......+ . +..++|+| +++.
T Consensus 42 ~~~l~~~d~~~~~~~~l-~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wsp-dg~~ 117 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNE-DSRK 117 (347)
T ss_dssp EEEEEEEETTTCCEEEE-ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECT-TSSE
T ss_pred cceEEEEeCCCCceEEc-ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECC-CCCE
Confidence 56688889876632111 568899999999999988764 2 4888899888766555444 3 99999999 7777
Q ss_pred EEEEeC---------------------------CCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECC-----
Q 004785 165 IASGSL---------------------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH----- 212 (730)
Q Consensus 165 LaSgS~---------------------------DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd----- 212 (730)
|+.++. ...|++||+.+++.+..+... .+..+.|+||| +++++..+
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~ 195 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQ 195 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCC
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEeccccccc
Confidence 777653 257999999998873333224 78899999999 77777531
Q ss_pred ---eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 213 ---KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 213 ---~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
...||.+++++. . .+..+ ..+..+ +|||++++..+.
T Consensus 196 ~~~~~~l~~~d~~~~-~---~l~~~-~~~~~~--spdg~~l~~~~~ 234 (347)
T 2gop_A 196 YFKFWDIYIWEDGKE-E---KMFEK-VSFYAV--DSDGERILLYGK 234 (347)
T ss_dssp SSCCEEEEEEETTEE-E---EEEEE-ESEEEE--EECSSCEEEEEC
T ss_pred ccccccEEEeCCCce-E---EeccC-cceeeE--CCCCCEEEEEEc
Confidence 334444443332 1 23334 445444 999998887764
No 177
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.11 E-value=1.8e-09 Score=116.38 Aligned_cols=96 Identities=10% Similarity=0.095 Sum_probs=74.1
Q ss_pred CCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEeC----------CCeEEEEECCCCeEEEEEecC------
Q 004785 89 EAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHG----------DHTVKIIDCQTGSCLKVLHGH------ 148 (730)
Q Consensus 89 ~DgsIrlWd~~t~~L----~gH~~~Vt~lafSPDG~~LaSgS~----------DgtVrVWDl~tg~~l~~l~gH------ 148 (730)
.|+.|.+||..++++ ..+..+ .++|+|||++|+++.. +++|.+||+.+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 367899999877643 233333 8999999999999863 678999999999988887643
Q ss_pred CCCcEEEEEccCCCCEEEEEeC--CCcEEEEECCCCeEEEE
Q 004785 149 RRTPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGS 187 (730)
Q Consensus 149 ~~~V~sVafSP~dg~lLaSgS~--DgtVrLWDl~tg~~i~~ 187 (730)
......++|+| ++++++++.. +++|.+||+.+++.+..
T Consensus 107 g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 107 LNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 34577899999 8888887763 68899999988766554
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.11 E-value=1.4e-08 Score=107.46 Aligned_cols=172 Identities=9% Similarity=0.010 Sum_probs=126.4
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC-----C
Q 004785 79 DARRGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR-----R 150 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~~L~---gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~-----~ 150 (730)
++++..++...++.|.+||..++++. ........++++++++.+++...++.|.+||..+++....+.... .
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence 34555555566789999999887532 234678899999998544444479999999999999887776433 1
Q ss_pred CcEEEEEccCCCCEEEEEe-CCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEEC-----------CeEEEEE
Q 004785 151 TPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-----------HKLYIWR 218 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS-~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSd-----------d~I~VWD 218 (730)
....+++ . ++.++++.. .+++|.+||+.+++.+..+........++++|+|+++++... +.|.+||
T Consensus 132 ~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 132 STEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp BCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred CcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 4567788 4 666666654 589999999999998888776666788999999997766654 3599999
Q ss_pred cCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
..+++... ............++|+||++++.++.
T Consensus 210 ~~t~~v~~--~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 210 AETFTVEK--QFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp TTTTEEEE--EEECCTTCCCEEEEECTTSCEEEEES
T ss_pred CCCCeEEE--EEecCCCCCceeEEEecCCCEEEEEc
Confidence 98876533 11122234789999999999877653
No 179
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.09 E-value=1.3e-09 Score=119.78 Aligned_cols=170 Identities=11% Similarity=0.030 Sum_probs=126.4
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC--------------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYC--------------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT 138 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~--------------~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~t 138 (730)
.+.+....++.+++++.++ +.+|+.+.- ....+.. |+.++| |+++|+++ .++.|++||+.+
T Consensus 41 nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 41 QNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp BCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSS
T ss_pred cEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchh
Confidence 3445556777888888874 555875311 1234566 999999 99999999 889999999988
Q ss_pred CeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEE
Q 004785 139 GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIW 217 (730)
Q Consensus 139 g~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VW 217 (730)
......+..|...+..+.+.+ . .++.++.||+|.+||+.++.... +...|.+++|||+| ++.|. ++++++|
T Consensus 116 l~~~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~ 187 (388)
T 1xip_A 116 LSEFRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSF 187 (388)
T ss_dssp TTCEEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEEE
T ss_pred hhccCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEEE
Confidence 776667777888898888776 2 28888999999999999887654 34589999999999 45555 6669999
Q ss_pred EcCCCcc--cc---CCeEEe---cCCCCeEEEEEccCCCeEEEEEe
Q 004785 218 RYNMREE--TS---SPRIVL---RTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 218 Dl~t~~~--~~---~~~~l~---~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+...... .. .+..+. +|...|.+|.|.+++.++++=..
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 8877652 11 010112 36788999999999997765443
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.09 E-value=8.5e-09 Score=107.67 Aligned_cols=158 Identities=11% Similarity=0.119 Sum_probs=104.6
Q ss_pred cCCCEEEEEeCC---C--eEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCC----------------------
Q 004785 79 DARRGLASWVEA---E--SLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD---------------------- 128 (730)
Q Consensus 79 d~g~~L~Sgs~D---g--sIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSgS~D---------------------- 128 (730)
.+++.|+....+ + .|.+|++.+++ +..+.. +..+.|+|||+.|+.++.+
T Consensus 68 pDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 68 PDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC------
T ss_pred CCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 455566655433 3 37777877652 333344 9999999999999888743
Q ss_pred -----CeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCC---------cEEEEECCCCeEEEEecCCCCe
Q 004785 129 -----HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH---------EVRLWNASTAECIGSRDFYRPI 194 (730)
Q Consensus 129 -----gtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dg---------tVrLWDl~tg~~i~~l~h~~~V 194 (730)
..|++||+.+++.+..+.. . .+..+.|+| ++ +++++..+. .|.++| +++......+ ..+
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~ 219 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSF 219 (347)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESE
T ss_pred ccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeC--CCceEEeccC-cce
Confidence 5799999999987555655 3 788999999 77 877776542 355555 6665554444 445
Q ss_pred EEEEEcCCCCEEEEEEC-C--------eEEEEEcCCCccccCCeEEecCCCCeEE-EEEccCCCeEEEE
Q 004785 195 ASIAFHASGELLAVASG-H--------KLYIWRYNMREETSSPRIVLRTRRSLRA-VHFHPHAAPLLLT 253 (730)
Q Consensus 195 ~sVafSPdG~~LAsgSd-d--------~I~VWDl~t~~~~~~~~~l~~h~~~V~s-VaFSPdG~~Llat 253 (730)
..+ +|||++|+.++. + .|++|| +++... ....+...+.. +.|+ || .++++
T Consensus 220 ~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~---l~~~~~~~~~~~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 220 YAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG---ILDEVDRGVGQAKIKD-GK-VYFTL 279 (347)
T ss_dssp EEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE---SSTTCCSEEEEEEEET-TE-EEEEE
T ss_pred eeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEe---ccccCCcccCCccEEc-Cc-EEEEE
Confidence 444 999998887762 2 378887 333211 22345667886 8999 88 44443
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.08 E-value=3e-09 Score=114.60 Aligned_cols=170 Identities=10% Similarity=0.097 Sum_probs=122.3
Q ss_pred EEEEecCCCEEEEEe----------CCCeEEEEeCCCCCCC----C------CCCCeEEEEECCCCCEEEEEeC--CCeE
Q 004785 74 FEAGRDARRGLASWV----------EAESLHHLRPKYCPLS----P------PPRSTIAAAFSPDGKTLASTHG--DHTV 131 (730)
Q Consensus 74 l~a~~d~g~~L~Sgs----------~DgsIrlWd~~t~~L~----g------H~~~Vt~lafSPDG~~LaSgS~--DgtV 131 (730)
-++...+++.++... .+++|.+||..+.+.. . +......++|+|||++|+++.. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 445556777777765 3667999998765321 1 2245678999999999998864 5789
Q ss_pred EEEECCCCeEEEE-EecC-------------------------------CCCcE--------------------------
Q 004785 132 KIIDCQTGSCLKV-LHGH-------------------------------RRTPW-------------------------- 153 (730)
Q Consensus 132 rVWDl~tg~~l~~-l~gH-------------------------------~~~V~-------------------------- 153 (730)
.+||+.+++.+.. +... .+.+.
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9999988776655 2100 00000
Q ss_pred --------------------------------------------EEEEccCCCCEEEEEeC-----------CCcEEEEE
Q 004785 154 --------------------------------------------VVRFHPLNPTIIASGSL-----------DHEVRLWN 178 (730)
Q Consensus 154 --------------------------------------------sVafSP~dg~lLaSgS~-----------DgtVrLWD 178 (730)
.++|+| +++.++.+.. +++|.+||
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD 292 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMD 292 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-CCCeEEEEEccCCCcccccCCCceEEEEE
Confidence 156777 4444444322 34799999
Q ss_pred CCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCC--ccccCCeEEecCCCCeEEEEEccCCC
Q 004785 179 ASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMR--EETSSPRIVLRTRRSLRAVHFHPHAA 248 (730)
Q Consensus 179 l~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~--~~~~~~~~l~~h~~~V~sVaFSPdG~ 248 (730)
+.+++.+..+.... +.+++|+|||++|++++++.|.|||..++ +.+. .+..+....+.+.|+|+|+
T Consensus 293 ~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~---~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 293 TKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR---TIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEE---EETTSCSSEEEEEECCCSC
T ss_pred CCCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeE---EeccCCCCcEEEEecCCCC
Confidence 99999998887556 99999999999999888866999999998 6543 3446677889999999996
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.08 E-value=9e-09 Score=120.14 Aligned_cols=146 Identities=9% Similarity=0.032 Sum_probs=107.2
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCC-----eEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCc------
Q 004785 105 PPPRSTIAAAFSPDGKTLASTHGDH-----TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE------ 173 (730)
Q Consensus 105 gH~~~Vt~lafSPDG~~LaSgS~Dg-----tVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dgt------ 173 (730)
+|...+..++|||||++||.++.++ .|++||+.+++.+.....+. .+..++|+| +++.|+.++.|+.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTH-DGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECT-TSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEe-CCCEEEEEEECCccccccc
Confidence 3445688999999999999876643 89999999998775433222 367899999 8888888887766
Q ss_pred ----------EEEEECCCCeE--EEEec---CCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCC------Ccccc
Q 004785 174 ----------VRLWNASTAEC--IGSRD---FYRPIASIAFHASGELLAVASG------HKLYIWRYNM------REETS 226 (730)
Q Consensus 174 ----------VrLWDl~tg~~--i~~l~---h~~~V~sVafSPdG~~LAsgSd------d~I~VWDl~t------~~~~~ 226 (730)
|++|++.+++. ...+. +...+..+.|+|||++|+..+. ..|++||+.+ +..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-- 277 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-- 277 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--
Confidence 99999988762 22222 3456789999999999887762 2499999976 421
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
....+..+...+.. .|+++|+.++..++
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEEC
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEEC
Confidence 13345566666655 48999998887764
No 183
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.07 E-value=2.9e-08 Score=101.22 Aligned_cols=167 Identities=13% Similarity=0.114 Sum_probs=120.2
Q ss_pred cCCCEEEEEeC--CCeEEEEeCCCCC---C-CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe--cCCC
Q 004785 79 DARRGLASWVE--AESLHHLRPKYCP---L-SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH--GHRR 150 (730)
Q Consensus 79 d~g~~L~Sgs~--DgsIrlWd~~t~~---L-~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~--gH~~ 150 (730)
+.+..|+.... ++.|.+||..... + ..+...+.+++++++|+++++...++.|++||. +++.+..+. .+..
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLE 164 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCS
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccC
Confidence 34445555543 7899999954331 2 234567899999999998888778899999995 466666664 4555
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC---CCeEEEEEcCCCCEEEEEEC-C-eEEEEEcCCCccc
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY---RPIASIAFHASGELLAVASG-H-KLYIWRYNMREET 225 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~---~~V~sVafSPdG~~LAsgSd-d-~I~VWDl~t~~~~ 225 (730)
.+..+++++ +++++++...++.|++||.. ++.+..+... ..+..++++++|+++++... + .|++||.. ++..
T Consensus 165 ~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~ 241 (286)
T 1q7f_A 165 FPNGVVVND-KQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLI 241 (286)
T ss_dssp SEEEEEECS-SSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEE
T ss_pred CcEEEEECC-CCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEE
Confidence 689999999 88888888889999999984 5555555432 57899999999998877764 3 79999964 3332
Q ss_pred cCCeEEecC--CCCeEEEEEccCCCeEEE
Q 004785 226 SSPRIVLRT--RRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 226 ~~~~~l~~h--~~~V~sVaFSPdG~~Lla 252 (730)
. .+..+ ...+..++|+|+|+.+++
T Consensus 242 ~---~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 242 S---ALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp E---EEEESSCCSCEEEEEEETTTEEEEE
T ss_pred E---EEcccCCCCcceeEEECCCCcEEEE
Confidence 2 22222 234789999999984444
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.06 E-value=6.6e-09 Score=109.64 Aligned_cols=174 Identities=13% Similarity=0.159 Sum_probs=128.8
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC--CC------------CCCCCCeEEEEECC-CCCEEEEEe-CCCeEEEEECCC
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC--PL------------SPPPRSTIAAAFSP-DGKTLASTH-GDHTVKIIDCQT 138 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~--~L------------~gH~~~Vt~lafSP-DG~~LaSgS-~DgtVrVWDl~t 138 (730)
++....+..+++...++.|++|+.... .+ .++......++|+| +|.++++.+ .++.|++|| .+
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 444445667777778899999998654 11 34555789999999 788888876 689999999 67
Q ss_pred CeEEEEEecC----------CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec---CCCCeEEEEEcCCCCE
Q 004785 139 GSCLKVLHGH----------RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGEL 205 (730)
Q Consensus 139 g~~l~~l~gH----------~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~---h~~~V~sVafSPdG~~ 205 (730)
|+.+..+... ...+..|+++|++++++++...++.|++||..+++.+..+. +...+..++|+| |..
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~ 253 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFL 253 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEE
Confidence 8877777432 23488999999448888888899999999999898888764 556789999999 433
Q ss_pred EEEEE--------CCeEEEEEcCCCccccCCeEE---ecCCCCeEEEEEccCCCeEEEEE
Q 004785 206 LAVAS--------GHKLYIWRYNMREETSSPRIV---LRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 206 LAsgS--------dd~I~VWDl~t~~~~~~~~~l---~~h~~~V~sVaFSPdG~~Llatg 254 (730)
++..+ +..|++||+.+++.+. .+ ..+...+..|+|+|+|. ++++.
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g~~~~---~~~~~~~~~~~p~~ia~~~dG~-lyvad 309 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSGEIID---VFKPVRKHFDMPHDIVASEDGT-VYIGD 309 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTCCEEE---EECCSSSCCSSEEEEEECTTSE-EEEEE
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCCeEEE---EEcCCCCccCCeeEEEECCCCC-EEEEE
Confidence 33332 1249999998887544 22 24566789999999995 54443
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.04 E-value=1.5e-08 Score=105.49 Aligned_cols=166 Identities=11% Similarity=0.039 Sum_probs=126.8
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCC-CCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCC-CCc
Q 004785 79 DARRGLASWVEAESLHHLRPKYCP----LSPPP-RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR-RTP 152 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~~----L~gH~-~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~-~~V 152 (730)
..++.|++++.++.|.+||.++++ +..+. ..+.++.++|+|++|+ +.++.|+.||. +|+.+..++.+. ..+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 456788899999999999998873 33444 4688999999999888 45788999998 899999998753 468
Q ss_pred EEEEEccCCCCEEEEEeC-CCcEEEEECCCCeEEEEecCC-------CCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCc
Q 004785 153 WVVRFHPLNPTIIASGSL-DHEVRLWNASTAECIGSRDFY-------RPIASIAFHASGELLAVASG-HKLYIWRYNMRE 223 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~-DgtVrLWDl~tg~~i~~l~h~-------~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t~~ 223 (730)
.++.+.+ +++++++.+. ++.|..+|. +|+.+..+... .....+++.++|++|++..+ +.|.+||.. ++
T Consensus 80 ~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 8899999 8999998887 778888886 67776665311 23456788999999998874 559999987 66
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
.+. .......+.++.+.++|..+++..
T Consensus 157 ~~w----~~~~~~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 157 LLN----SVKLSGTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp EEE----EEECSSCCCEEEECTTSCEEEECB
T ss_pred EEE----EEECCCCccceeEcCCCCEEEEeC
Confidence 533 222234567788899999766543
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.00 E-value=4.3e-09 Score=109.66 Aligned_cols=147 Identities=12% Similarity=0.106 Sum_probs=109.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCC----CcEEEEE
Q 004785 103 LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD----HEVRLWN 178 (730)
Q Consensus 103 L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~D----gtVrLWD 178 (730)
+..+...+.+++|+++|++++++..++.|++||..+++....+..+...+.+++|+| +++++++...+ +.|.+||
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEEC
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEe
Confidence 344566789999999999888888899999999998886655545677899999999 78888887766 6899999
Q ss_pred CCCCeEEEEec---CCCCeEEEEEcCCCCEEEEEEC-------CeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCC
Q 004785 179 ASTAECIGSRD---FYRPIASIAFHASGELLAVASG-------HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA 248 (730)
Q Consensus 179 l~tg~~i~~l~---h~~~V~sVafSPdG~~LAsgSd-------d~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~ 248 (730)
..+++....+. ....+..++++|+|+++++... +.|+.||..+++.. .+......+..++|+|+|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT----PIIQNISVANGIALSTDEK 194 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE----EEEEEESSEEEEEECTTSS
T ss_pred CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE----EeecCCCcccceEECCCCC
Confidence 98877653332 3457899999999998776653 23666665544321 2223334578999999998
Q ss_pred eEEEEE
Q 004785 249 PLLLTA 254 (730)
Q Consensus 249 ~Llatg 254 (730)
+++++.
T Consensus 195 ~l~v~~ 200 (333)
T 2dg1_A 195 VLWVTE 200 (333)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 666554
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.00 E-value=6.9e-08 Score=98.42 Aligned_cols=170 Identities=9% Similarity=0.095 Sum_probs=121.3
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCCC---C------CCCCCCeEEEEE-CCCCCEEEEEeC-CCeEEEEECCCCeEEEEE
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYCP---L------SPPPRSTIAAAF-SPDGKTLASTHG-DHTVKIIDCQTGSCLKVL 145 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~~---L------~gH~~~Vt~laf-SPDG~~LaSgS~-DgtVrVWDl~tg~~l~~l 145 (730)
....+..+++...++.|.+||..... + .+|...+.++++ .++++++++... ++.|++|| .+++.+..+
T Consensus 37 ~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~ 115 (286)
T 1q7f_A 37 VNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKF 115 (286)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEe
Confidence 33345556666778899999976431 1 234567899999 567777666643 88999999 677777777
Q ss_pred ec-CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec---CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcC
Q 004785 146 HG-HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGELLAVAS-GHKLYIWRYN 220 (730)
Q Consensus 146 ~g-H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~---h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~ 220 (730)
.. +...+..+++++ +++++++...++.|++||.. ++.+..+. +...+..++++++|+++++.. ++.|++||..
T Consensus 116 ~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 116 GATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp CTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred cCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 43 445789999999 78888888888999999964 55555553 345689999999999766655 5669999975
Q ss_pred CCccccCCeEEec--CCCCeEEEEEccCCCeEEEE
Q 004785 221 MREETSSPRIVLR--TRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 221 t~~~~~~~~~l~~--h~~~V~sVaFSPdG~~Llat 253 (730)
.. ... .+.. +...+..++++++|+.+++.
T Consensus 194 g~-~~~---~~~~~g~~~~p~~i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 194 GQ-YLR---QIGGEGITNYPIGVGINSNGEILIAD 224 (286)
T ss_dssp CC-EEE---EESCTTTSCSEEEEEECTTCCEEEEE
T ss_pred CC-EEE---EEccCCccCCCcEEEECCCCCEEEEe
Confidence 43 211 2222 23578999999999855554
No 188
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.00 E-value=1.5e-08 Score=119.19 Aligned_cols=237 Identities=12% Similarity=0.018 Sum_probs=144.5
Q ss_pred ecCCCEEEEEeCC-----CeEEEEeCCCCCCC-CCCCC--eEEEEECCCCCEEEEEeCCCe--------------EEEEE
Q 004785 78 RDARRGLASWVEA-----ESLHHLRPKYCPLS-PPPRS--TIAAAFSPDGKTLASTHGDHT--------------VKIID 135 (730)
Q Consensus 78 ~d~g~~L~Sgs~D-----gsIrlWd~~t~~L~-gH~~~--Vt~lafSPDG~~LaSgS~Dgt--------------VrVWD 135 (730)
+.+++.|+....+ ..|++||+.++... .+... +..++|+|| +.|+.++.|.. |++|+
T Consensus 171 SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~ 249 (741)
T 1yr2_A 171 SDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHR 249 (741)
T ss_dssp CTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEE
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEE
Confidence 3455556544432 36999999987532 11112 357899999 99998887654 99999
Q ss_pred CCCCeE--EEEEec--CCCCcEEEEEccCCCCEEEEEeCC-----CcEEEEECCCC--e-EEEEecCCCCeEEEEEcCCC
Q 004785 136 CQTGSC--LKVLHG--HRRTPWVVRFHPLNPTIIASGSLD-----HEVRLWNASTA--E-CIGSRDFYRPIASIAFHASG 203 (730)
Q Consensus 136 l~tg~~--l~~l~g--H~~~V~sVafSP~dg~lLaSgS~D-----gtVrLWDl~tg--~-~i~~l~h~~~V~sVafSPdG 203 (730)
+.++.. ...+.. +...+..+.|+| ++++++..+.+ ..|++||+.++ + ......+...+... ++|+|
T Consensus 250 lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg 327 (741)
T 1yr2_A 250 LGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVG 327 (741)
T ss_dssp TTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEET
T ss_pred CCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccC
Confidence 987752 333433 334588999999 88777766644 38999999887 4 44444455455555 34899
Q ss_pred CEEEEEECC-----eEEEEEcCCCc-cccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccC
Q 004785 204 ELLAVASGH-----KLYIWRYNMRE-ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRY 277 (730)
Q Consensus 204 ~~LAsgSdd-----~I~VWDl~t~~-~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~ 277 (730)
+.|+..++. +|++||+.++. ... ..+..+...+..+.|+ +..++++.......
T Consensus 328 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~--~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~----------------- 386 (741)
T 1yr2_A 328 DQLWFVSGDGAPLKKIVRVDLSGSTPRFD--TVVPESKDNLESVGIA--GNRLFASYIHDAKS----------------- 386 (741)
T ss_dssp TEEEEEECTTCTTCEEEEEECSSSSCEEE--EEECCCSSEEEEEEEE--BTEEEEEEEETTEE-----------------
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCccccE--EEecCCCCeEEEEEEE--CCEEEEEEEECCEE-----------------
Confidence 988888742 29999987752 211 2233344456677777 44465554322111
Q ss_pred CCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCCcceee
Q 004785 278 PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRL 344 (730)
Q Consensus 278 p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~~~~l 344 (730)
.+.+.+.. +........ + ....+..+.+++|++.|++...+...+.+++.+++.+...+.|
T Consensus 387 ---~l~~~~~~-g~~~~~l~~-~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 387 ---QVLAFDLD-GKPAGAVSL-P-GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp ---EEEEEETT-SCEEEECBC-S-SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred ---EEEEEeCC-CCceeeccC-C-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 12222211 000000000 0 0112335788899999999888888899999999877664444
No 189
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.98 E-value=2.4e-08 Score=116.77 Aligned_cols=241 Identities=11% Similarity=0.011 Sum_probs=150.5
Q ss_pred EecCCCEEE-EEe----CCCeEEEEeCCCCCC-CCCCCCe--EEEEECCCCCEEEEEeCCC-------------eEEEEE
Q 004785 77 GRDARRGLA-SWV----EAESLHHLRPKYCPL-SPPPRST--IAAAFSPDGKTLASTHGDH-------------TVKIID 135 (730)
Q Consensus 77 ~~d~g~~L~-Sgs----~DgsIrlWd~~t~~L-~gH~~~V--t~lafSPDG~~LaSgS~Dg-------------tVrVWD 135 (730)
.+.+++.|+ +.. +...|++||+.+++. ..+...+ ..++|+ ||+.|+.++.|. .|++|+
T Consensus 136 ~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~ 214 (693)
T 3iuj_A 136 FSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHR 214 (693)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEE
T ss_pred ECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEE
Confidence 344555555 332 335699999998853 2222223 578999 999999998874 499999
Q ss_pred CCCCeE--EEEEe--c-CCCCcEEEEEccCCCCEE-EEEeC---CCcEEEEECCCC--eEEEEecCCCCeEEEEEcCCCC
Q 004785 136 CQTGSC--LKVLH--G-HRRTPWVVRFHPLNPTII-ASGSL---DHEVRLWNASTA--ECIGSRDFYRPIASIAFHASGE 204 (730)
Q Consensus 136 l~tg~~--l~~l~--g-H~~~V~sVafSP~dg~lL-aSgS~---DgtVrLWDl~tg--~~i~~l~h~~~V~sVafSPdG~ 204 (730)
+.++.. ...+. . |...+..+.|+| +++++ ++.+. ++.|++||+.++ +......+....... |+++|.
T Consensus 215 lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~ 292 (693)
T 3iuj_A 215 LGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGS 292 (693)
T ss_dssp TTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETT
T ss_pred CCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCC
Confidence 987642 33333 3 445577899999 66655 44432 358999999876 444444555555554 777787
Q ss_pred EEEEEEC-----CeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCC
Q 004785 205 LLAVASG-----HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPP 279 (730)
Q Consensus 205 ~LAsgSd-----d~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~ 279 (730)
.|+..++ .+|.+||+.++.... ...+..+...+. .|++++++|+.+.......
T Consensus 293 ~l~~~t~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~------------------- 350 (693)
T 3iuj_A 293 TLYLLTNRDAPNRRLVTVDAANPGPAH-WRDLIPERQQVL--TVHSGSGYLFAEYMVDATA------------------- 350 (693)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSCE--EEEEETTEEEEEEEETTEE-------------------
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCccc-cEEEecCCCCEE--EEEEECCEEEEEEEECCee-------------------
Confidence 6666652 239999998765422 235666666665 8999999888776533211
Q ss_pred CeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCCcceeeec
Q 004785 280 PVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLT 346 (730)
Q Consensus 280 ~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss~~~~l~~ 346 (730)
.+.+++........+.. +. ......+.+++|++.|++...+...+.+++..++.+...+.|..
T Consensus 351 -~l~~~d~~g~~~~~l~~--p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 351 -RVEQFDYEGKRVREVAL--PG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp -EEEEECTTSCEEEEECC--SS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEEC
T ss_pred -EEEEEECCCCeeEEeec--CC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEe
Confidence 22223222111000000 00 01122566788999999988888889999999987766555543
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.93 E-value=1.8e-08 Score=117.39 Aligned_cols=141 Identities=16% Similarity=0.117 Sum_probs=100.1
Q ss_pred CCCCCeEEEEECCCCCEEEEE-----eCCCeEEEEECCCCeEEEEEecCCCC--cEEEEEccCCCCEEEEEeCCCc----
Q 004785 105 PPPRSTIAAAFSPDGKTLAST-----HGDHTVKIIDCQTGSCLKVLHGHRRT--PWVVRFHPLNPTIIASGSLDHE---- 173 (730)
Q Consensus 105 gH~~~Vt~lafSPDG~~LaSg-----S~DgtVrVWDl~tg~~l~~l~gH~~~--V~sVafSP~dg~lLaSgS~Dgt---- 173 (730)
+|...+..++|||||++||.+ +++.+|++||+.+++.+. ..+... ...++|+| +++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCCc
Confidence 566679999999999999844 445789999999998641 112222 26799999 8888888888776
Q ss_pred ---------EEEEECCCCeE--EEEec---CCCCeEEEEEcCCCCEEEEEE-CC----eEEEEEcCCCccccCCeEEecC
Q 004785 174 ---------VRLWNASTAEC--IGSRD---FYRPIASIAFHASGELLAVAS-GH----KLYIWRYNMREETSSPRIVLRT 234 (730)
Q Consensus 174 ---------VrLWDl~tg~~--i~~l~---h~~~V~sVafSPdG~~LAsgS-dd----~I~VWDl~t~~~~~~~~~l~~h 234 (730)
|++|++.+++. ...+. +...+.++.|+|||++|+..+ ++ .|++||..+++ ...+..+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~----~~~l~~~ 270 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD----FRLLVKG 270 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS----CEEEEEC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc----eEEeecC
Confidence 99999998762 22222 345788999999999887766 33 37777654443 2345556
Q ss_pred CCCeEEEEEccCCCeEEEEE
Q 004785 235 RRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 235 ~~~V~sVaFSPdG~~Llatg 254 (730)
...+....| ++|. +++.+
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s 288 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLT 288 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEE
T ss_pred CCceEEEEe-cCCc-EEEEE
Confidence 666677767 6777 66554
No 191
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.90 E-value=3.8e-07 Score=94.68 Aligned_cols=178 Identities=8% Similarity=0.004 Sum_probs=115.4
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEeCCCCCC--CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC-
Q 004785 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPL--SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH- 148 (730)
Q Consensus 72 ~ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~~L--~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH- 148 (730)
.-..+..+.+..+++...++.|..||..++.+ ......+.+++|+++|+++++ . +..|.+||.++++........
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCT
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCC
Confidence 34444444566677777888999999887642 234567999999999995554 3 568999999888754333221
Q ss_pred ---CCCcEEEEEccCCCCEEEEEeCC---------CcEEEEECC-CCeEEEEecCCCCeEEEEEcCCCCEEEEEE--CCe
Q 004785 149 ---RRTPWVVRFHPLNPTIIASGSLD---------HEVRLWNAS-TAECIGSRDFYRPIASIAFHASGELLAVAS--GHK 213 (730)
Q Consensus 149 ---~~~V~sVafSP~dg~lLaSgS~D---------gtVrLWDl~-tg~~i~~l~h~~~V~sVafSPdG~~LAsgS--dd~ 213 (730)
...++.++++| +++++++...+ ....||.+. .++...........+.++|+|||+.|+++. +++
T Consensus 94 ~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~ 172 (297)
T 3g4e_A 94 DKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYS 172 (297)
T ss_dssp TCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTE
T ss_pred CCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCc
Confidence 23478899999 78877765322 223444443 244444444445578999999999887766 456
Q ss_pred EEEEEcC--CCccccCCeEE---ecCCCCeEEEEEccCCCeEEEE
Q 004785 214 LYIWRYN--MREETSSPRIV---LRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 214 I~VWDl~--t~~~~~~~~~l---~~h~~~V~sVaFSPdG~~Llat 253 (730)
|++||+. ++.... ...+ ..+...+..++++++|+.+++.
T Consensus 173 i~~~~~d~~~G~~~~-~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 173 VDAFDYDLQTGQISN-RRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp EEEEEECTTTCCEEE-EEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred EEEEeccCCCCcccC-cEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 9999984 443211 1111 1233567899999999855544
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.90 E-value=1.5e-07 Score=108.37 Aligned_cols=170 Identities=11% Similarity=0.024 Sum_probs=128.1
Q ss_pred CEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECC--CCeEEEEEecCCCCcEEEE
Q 004785 82 RGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ--TGSCLKVLHGHRRTPWVVR 156 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~L~---gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~--tg~~l~~l~gH~~~V~sVa 156 (730)
..+++...++.|.++|..++++. .....+..+.|+|||++|++++.|+.|.+||+. +++.+..+.... ....++
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia 246 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIE 246 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeE
Confidence 45566678899999999887432 123357799999999999999999999999996 888888887543 467899
Q ss_pred Ec----cCCCCEEEE-EeCCCcEEEEECCCCeEEEEecC------------CCCeEEEEEcCCCCEEEEEE--CCeEEEE
Q 004785 157 FH----PLNPTIIAS-GSLDHEVRLWNASTAECIGSRDF------------YRPIASIAFHASGELLAVAS--GHKLYIW 217 (730)
Q Consensus 157 fS----P~dg~lLaS-gS~DgtVrLWDl~tg~~i~~l~h------------~~~V~sVafSPdG~~LAsgS--dd~I~VW 217 (730)
|+ | +++++++ ...+++|.++|..+.+.++.+.. ...+..+.+++++..+++.- ++.|.++
T Consensus 247 ~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~v 325 (567)
T 1qks_A 247 TSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV 325 (567)
T ss_dssp ECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred EccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEE
Confidence 99 7 6666555 45579999999999998877542 12678899999988666655 3559999
Q ss_pred EcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 218 RYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 218 Dl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
|+...+... ............+.|+|||++++++..
T Consensus 326 d~~~~~~~~--v~~i~~~~~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 326 DYTDLNNLK--TTEISAERFLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp ETTCSSEEE--EEEEECCSSEEEEEECTTSCEEEEEEG
T ss_pred ecCCCccce--eeeeeccccccCceECCCCCEEEEEeC
Confidence 997764322 122344566788999999999887764
No 193
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.90 E-value=6.8e-08 Score=99.34 Aligned_cols=171 Identities=18% Similarity=0.134 Sum_probs=117.1
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCCCCC-------C-CCCCeEEEEECCCCCEEEEE----e-------------CCCe
Q 004785 76 AGRDARRGLASWVEAESLHHLRPKYCPLS-------P-PPRSTIAAAFSPDGKTLAST----H-------------GDHT 130 (730)
Q Consensus 76 a~~d~g~~L~Sgs~DgsIrlWd~~t~~L~-------g-H~~~Vt~lafSPDG~~LaSg----S-------------~Dgt 130 (730)
+....+..+++...++.|.+||..++++. + ....+.+++++|+|+++++. + ..+.
T Consensus 75 ~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 75 CLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRW 154 (296)
T ss_dssp EECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred eECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcE
Confidence 33334555555445689999998766421 1 12346789999999988873 2 1345
Q ss_pred EEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECC-CCeE---EEEe-cCCCCeEEEEEcCCCCE
Q 004785 131 VKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-TAEC---IGSR-DFYRPIASIAFHASGEL 205 (730)
Q Consensus 131 VrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~-tg~~---i~~l-~h~~~V~sVafSPdG~~ 205 (730)
|..+|.. ++ +..+..+...+..++|+| +++++++.+.++.|++||+. +++. ...+ .....+..++++++|++
T Consensus 155 l~~~~~~-g~-~~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l 231 (296)
T 3e5z_A 155 VFRLAPD-GT-LSAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLI 231 (296)
T ss_dssp EEEECTT-SC-EEEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCE
T ss_pred EEEECCC-CC-EEEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCE
Confidence 6666655 54 445556667789999999 77777777888999999997 5554 2223 23445678999999997
Q ss_pred EEEEECCeEEEEEcCCCccccCCeEEecCCCCeEEEEE-ccCCCeEEEEEe
Q 004785 206 LAVASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHF-HPHAAPLLLTAE 255 (730)
Q Consensus 206 LAsgSdd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaF-SPdG~~Llatgs 255 (730)
+++. +++|.+||.. ++... .+..+.. +.+++| +|+++.|.+++.
T Consensus 232 ~v~~-~~~v~~~~~~-g~~~~---~~~~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 232 WASA-GDGVHVLTPD-GDELG---RVLTPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp EEEE-TTEEEEECTT-SCEEE---EEECSSC-CCEEEEESTTSCEEEEEET
T ss_pred EEEc-CCeEEEECCC-CCEEE---EEECCCC-ceeEEEECCCCCEEEEEcC
Confidence 6666 7779999986 43322 3444555 899999 589887777653
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.89 E-value=1.2e-07 Score=95.20 Aligned_cols=168 Identities=10% Similarity=0.004 Sum_probs=117.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCC----CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~L~----gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
.+. |+.+..++.|..||.....+. .....+.+++++++|+++++...++.|.+|+..+.............+..+
T Consensus 77 ~g~-l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i 155 (270)
T 1rwi_B 77 AGT-VYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGV 155 (270)
T ss_dssp TCC-EEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCE
T ss_pred CCC-EEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeE
Confidence 344 444444889999998765321 233578999999999977777778899999876554433223333467889
Q ss_pred EEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEec
Q 004785 156 RFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~ 233 (730)
++++ +++++++...++.|.+||..++...... .....+..++++++|+++++.. ++.|.+||........ ....
T Consensus 156 ~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~---~~~~ 231 (270)
T 1rwi_B 156 AVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV---LPFT 231 (270)
T ss_dssp EECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE---CCCC
T ss_pred EEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee---eccC
Confidence 9999 7788888777889999999876654432 2336789999999997655554 4569999986643211 1122
Q ss_pred CCCCeEEEEEccCCCeEEE
Q 004785 234 TRRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Lla 252 (730)
+...+.+++++++|+.+++
T Consensus 232 ~~~~p~~i~~~~~g~l~v~ 250 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRTVYVA 250 (270)
T ss_dssp SCSCEEEEEECTTCCEEEE
T ss_pred CCCCceeEEECCCCCEEEE
Confidence 3357899999999984444
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.87 E-value=1.2e-07 Score=100.30 Aligned_cols=173 Identities=10% Similarity=0.009 Sum_probs=122.0
Q ss_pred EEEecCCCEEEEEe-CCCeEEEEeCCCCCCC-----CC----CCCeEEEEECCCCCEEEEEe--CCCeEEEEECCCCeEE
Q 004785 75 EAGRDARRGLASWV-EAESLHHLRPKYCPLS-----PP----PRSTIAAAFSPDGKTLASTH--GDHTVKIIDCQTGSCL 142 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs-~DgsIrlWd~~t~~L~-----gH----~~~Vt~lafSPDG~~LaSgS--~DgtVrVWDl~tg~~l 142 (730)
++...++ .++... .++.|.+||..+.++. +. ......+++ +++.|+.+. .++.|.+||..+++.+
T Consensus 89 i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 89 IHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp EEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred EEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 3343344 455444 7899999999876421 11 114556777 455555554 4889999999999988
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEeCC----------CcEEEEECCCCeEEEEecC--CCCeEEEEEcCCCCEEEEEE
Q 004785 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLD----------HEVRLWNASTAECIGSRDF--YRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 143 ~~l~gH~~~V~sVafSP~dg~lLaSgS~D----------gtVrLWDl~tg~~i~~l~h--~~~V~sVafSPdG~~LAsgS 210 (730)
..+... .....+.++| ++++++++..+ +.|.+||..+++.+..+.. ......++|+|++++|+++.
T Consensus 166 ~~i~~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 166 DELTIG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEEECS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEEEcC-CCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 888653 3467899999 78877776654 7899999999988766653 34789999999999998876
Q ss_pred CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 211 GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 211 dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
. .|++||..+++... .............++++|++..+.++.
T Consensus 244 ~-~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 244 N-DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp S-SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred c-EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 5 89999998876532 111122246789999999655555554
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.85 E-value=8.3e-07 Score=102.08 Aligned_cols=177 Identities=11% Similarity=-0.019 Sum_probs=125.1
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCC--CCCCC---CCCCCeEEEEEC----CCCCEEEEEeC-CCeEEEEECCCCeEEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPK--YCPLS---PPPRSTIAAAFS----PDGKTLASTHG-DHTVKIIDCQTGSCLKV 144 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~--t~~L~---gH~~~Vt~lafS----PDG~~LaSgS~-DgtVrVWDl~tg~~l~~ 144 (730)
+..+.+++.++.++.|+.|.+||+. +.++. ........++|+ |||++++++.. +++|.|+|..+.+.++.
T Consensus 202 v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~ 281 (567)
T 1qks_A 202 SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI 281 (567)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE
T ss_pred eEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEE
Confidence 4445577888888899999999985 44211 012235789999 69999988876 58999999999998887
Q ss_pred EecC-----------CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE--EEecCCCCeEEEEEcCCCCEEEEEE-
Q 004785 145 LHGH-----------RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI--GSRDFYRPIASIAFHASGELLAVAS- 210 (730)
Q Consensus 145 l~gH-----------~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i--~~l~h~~~V~sVafSPdG~~LAsgS- 210 (730)
+... ...+..+..++++..++++...+|.|.++|..+.+.. ..+........+.|+|+|++|+++.
T Consensus 282 i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 282 QSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp EECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG
T ss_pred EeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC
Confidence 7522 1257788888855666777777899999999876433 3344556678899999999998887
Q ss_pred -CCeEEEEEcCCCccccCCeEE---ecCCC-CeEEEEEccCCCeEEEEE
Q 004785 211 -GHKLYIWRYNMREETSSPRIV---LRTRR-SLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 211 -dd~I~VWDl~t~~~~~~~~~l---~~h~~-~V~sVaFSPdG~~Llatg 254 (730)
+++|.++|+.+++..... .. ..|.. .+. + ++|++..+.++.
T Consensus 362 ~sn~V~ViD~~t~kl~~~i-~vgg~~Phpg~g~~-~-~~p~~g~v~~t~ 407 (567)
T 1qks_A 362 ARNKLVVIDTKEGKLVAIE-DTGGQTPHPGRGAN-F-VHPTFGPVWATS 407 (567)
T ss_dssp GGTEEEEEETTTTEEEEEE-ECSSSSBCCTTCEE-E-EETTTEEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEE-eccCcCCCCcccee-e-ECCCCCcEEEeC
Confidence 466999999988754311 11 12322 222 2 688866565554
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.85 E-value=1.8e-06 Score=88.39 Aligned_cols=163 Identities=10% Similarity=0.052 Sum_probs=108.9
Q ss_pred EeCCCeEEEEeCCCCCCC--------CCCCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCeEEEE-Eec----CCCCc
Q 004785 87 WVEAESLHHLRPKYCPLS--------PPPRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGSCLKV-LHG----HRRTP 152 (730)
Q Consensus 87 gs~DgsIrlWd~~t~~L~--------gH~~~Vt~lafSPD-G~~LaSgS~DgtVrVWDl~tg~~l~~-l~g----H~~~V 152 (730)
...++.|.+||..++++. ++...+.+++++++ |+++++. .+..|.+||.. ++.... ... ....+
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCC
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCC
Confidence 366788999997766421 24567999999999 6655544 44479999988 765433 221 12358
Q ss_pred EEEEEccCCCCEEEEEeCC---------------CcEEEEECCCCeEEEEecCCCCeEEEEEc----CCCCEEEEEE--C
Q 004785 153 WVVRFHPLNPTIIASGSLD---------------HEVRLWNASTAECIGSRDFYRPIASIAFH----ASGELLAVAS--G 211 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~D---------------gtVrLWDl~tg~~i~~l~h~~~V~sVafS----PdG~~LAsgS--d 211 (730)
..+++++ +++++++...+ +.|..||.. ++.............++|+ |+|+.|+++. +
T Consensus 120 ~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~ 197 (314)
T 1pjx_A 120 NDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT 197 (314)
T ss_dssp CEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT
T ss_pred cCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCC
Confidence 8999999 78888877655 568888876 6655444444567899999 9998777665 4
Q ss_pred CeEEEEEcC-CCcccc--CCeEEecCC-CCeEEEEEccCCCeEEEE
Q 004785 212 HKLYIWRYN-MREETS--SPRIVLRTR-RSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 212 d~I~VWDl~-t~~~~~--~~~~l~~h~-~~V~sVaFSPdG~~Llat 253 (730)
++|++||+. .++... ....+..+. ..+..++++++|+.+++.
T Consensus 198 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 198 KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence 569999986 332111 001111222 567899999999866554
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.78 E-value=1.7e-06 Score=91.31 Aligned_cols=169 Identities=12% Similarity=0.005 Sum_probs=112.0
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCCC--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEec---C-CCCc
Q 004785 79 DARRGLASWVEAESLHHLRPKYCPLS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG---H-RRTP 152 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~~L~--gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g---H-~~~V 152 (730)
+.+..+++...++.|..||..++.+. .....+.+++|+++|+++++. .+ .|.+||..+++....... . ...+
T Consensus 59 ~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~ 136 (326)
T 2ghs_A 59 ASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRS 136 (326)
T ss_dssp TTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCC
Confidence 34556666667788889988765321 234679999999999877754 44 599999988875433221 1 1347
Q ss_pred EEEEEccCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC--CC
Q 004785 153 WVVRFHPLNPTIIASGSL------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYN--MR 222 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~------DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~--t~ 222 (730)
..++++| +++++++... .+.|..+| +++...........+.++|+|||+.|+++. ++.|++||+. ++
T Consensus 137 ~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 137 NDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp EEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred CCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 8899999 7777776542 24566666 565544434344678999999999887776 3459999986 44
Q ss_pred -ccccCCeEEe---cCCCCeEEEEEccCCCeEEEE
Q 004785 223 -EETSSPRIVL---RTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 223 -~~~~~~~~l~---~h~~~V~sVaFSPdG~~Llat 253 (730)
.... ...+. .....+..++++++|..++++
T Consensus 214 l~~~~-~~~~~~~~~~~~~p~gi~~d~~G~lwva~ 247 (326)
T 2ghs_A 214 LPTGK-AEVFIDSTGIKGGMDGSVCDAEGHIWNAR 247 (326)
T ss_dssp CBSSC-CEEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred CcccC-ceEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 3211 11221 133457889999999865554
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.77 E-value=3e-07 Score=108.02 Aligned_cols=145 Identities=14% Similarity=0.064 Sum_probs=100.1
Q ss_pred CCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCc-------
Q 004785 106 PPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE------- 173 (730)
Q Consensus 106 H~~~Vt~lafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dgt------- 173 (730)
|...+..++|||||++|+.++.+ .+|++||+.+++.+... .+...+..++|+| + +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEEST-T-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEEC-C-CEEEEEEecCcccccccc
Confidence 33468899999999999988664 46999999999876532 1222245789999 6 77777766554
Q ss_pred -------EEEEECCCCeE--EEEec---CCCCeEEEEEcCCCCEEEEEE-CC-----eEEEEEcCCCccccCCeEEecCC
Q 004785 174 -------VRLWNASTAEC--IGSRD---FYRPIASIAFHASGELLAVAS-GH-----KLYIWRYNMREETSSPRIVLRTR 235 (730)
Q Consensus 174 -------VrLWDl~tg~~--i~~l~---h~~~V~sVafSPdG~~LAsgS-dd-----~I~VWDl~t~~~~~~~~~l~~h~ 235 (730)
|++|++.+++. ...+. +...+..+.|+|||++|+..+ ++ .|++||+.++... ....+..+.
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG-PVTALIPDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC-CCEEEECSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc-ccEEecCCC
Confidence 99999987752 22332 223588999999999888776 32 4999999876321 023455555
Q ss_pred CCeEEEEEccCCCeEEEEEe
Q 004785 236 RSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 236 ~~V~sVaFSPdG~~Llatgs 255 (730)
..+.... +|+|+.|+..++
T Consensus 317 ~~~~~~~-~~dg~~l~~~s~ 335 (741)
T 1yr2_A 317 KAQWDFV-DGVGDQLWFVSG 335 (741)
T ss_dssp SSCEEEE-EEETTEEEEEEC
T ss_pred CceEEEE-eccCCEEEEEEC
Confidence 5555553 589998887764
No 200
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.76 E-value=2.1e-07 Score=108.73 Aligned_cols=210 Identities=12% Similarity=0.083 Sum_probs=125.9
Q ss_pred CCCCCeEEEEECCCCCEEEEEe-----CCCeEEEEECCCCeEEEE-EecCCCCcEEEEEccCCCCEEEEEeCCC------
Q 004785 105 PPPRSTIAAAFSPDGKTLASTH-----GDHTVKIIDCQTGSCLKV-LHGHRRTPWVVRFHPLNPTIIASGSLDH------ 172 (730)
Q Consensus 105 gH~~~Vt~lafSPDG~~LaSgS-----~DgtVrVWDl~tg~~l~~-l~gH~~~V~sVafSP~dg~lLaSgS~Dg------ 172 (730)
+|...+..++|||||++||.+. ++.+|++||+.+|+.+.. +.+. ....++|+ |++.|+.++.|.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws--Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL--GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE--TTTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe--CCCEEEEEEecCcccccc
Confidence 3566789999999999998643 236799999999986543 2221 13568899 445555555553
Q ss_pred -------cEEEEECCCCeE--EEEec----CCCCeEEEEEcCCCCEEEEEE-C----CeEEEEEcCCCccccCCeEEecC
Q 004785 173 -------EVRLWNASTAEC--IGSRD----FYRPIASIAFHASGELLAVAS-G----HKLYIWRYNMREETSSPRIVLRT 234 (730)
Q Consensus 173 -------tVrLWDl~tg~~--i~~l~----h~~~V~sVafSPdG~~LAsgS-d----d~I~VWDl~t~~~~~~~~~l~~h 234 (730)
.|++|++.++.. ...+. +...+.++.|+|||++|+... . ..|++||+.++.. ....+..+
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~--~~~~l~~~ 279 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA--PLLTVQGD 279 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--CCEEEECS
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--ceEEEeCC
Confidence 499999987653 23332 234578899999999886654 2 2499999987642 23345556
Q ss_pred CCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecC
Q 004785 235 RRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRD 314 (730)
Q Consensus 235 ~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpD 314 (730)
....... |+++|..++..++... +...|..++...+.........+.. -.. . .|+++
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~-------------------~~~~l~~~d~~~~~~~~~~~l~~~~-~~~-~-~~s~~ 336 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDA-------------------PNRRLVTVDAANPGPAHWRDLIPER-QQV-L-TVHSG 336 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTC-------------------TTCEEEEEETTSCCGGGCEEEECCC-SSC-E-EEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCC-------------------CCCEEEEEeCCCCCccccEEEecCC-CCE-E-EEEEE
Confidence 6666555 7788887777654211 1123444554443321111111111 112 2 89999
Q ss_pred CCEEEEEecCCCCCcccceeecCCCcceee
Q 004785 315 DERISLQHTEHDSGATRTQQSLRSSSSVRL 344 (730)
Q Consensus 315 g~rI~~~~~~~dsgs~~~~~~~~ss~~~~l 344 (730)
++.|++...++. ...+...++++....++
T Consensus 337 g~~lv~~~~~~g-~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 337 SGYLFAEYMVDA-TARVEQFDYEGKRVREV 365 (693)
T ss_dssp TTEEEEEEEETT-EEEEEEECTTSCEEEEE
T ss_pred CCEEEEEEEECC-eeEEEEEECCCCeeEEe
Confidence 999887554332 22445555554433333
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.76 E-value=3.3e-07 Score=92.01 Aligned_cols=168 Identities=8% Similarity=0.002 Sum_probs=112.3
Q ss_pred CCCEEE-EEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe-cCCCCcE
Q 004785 80 ARRGLA-SWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH-GHRRTPW 153 (730)
Q Consensus 80 ~g~~L~-Sgs~DgsIrlWd~~t~~L----~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~-gH~~~V~ 153 (730)
.+...+ +...++.|..|+..+... ..+...+.+++++++|+++++.. ++.|.+||...... ..+. .....+.
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~ 111 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPE 111 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEE
T ss_pred CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCc
Confidence 444333 335678899998765421 23345688999999998666655 88999999876543 3333 2335688
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEE
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIV 231 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l 231 (730)
.+++++ +++++++...++.|.+||..+....... .....+..++++++|+++++.. ++.|++||........ ..
T Consensus 112 ~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~~ 187 (270)
T 1rwi_B 112 GLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV---LP 187 (270)
T ss_dssp EEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE---CC
T ss_pred ceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe---ec
Confidence 999999 7888888778899999987665443322 2334678899999999665554 4569999987654322 11
Q ss_pred ecCCCCeEEEEEccCCCeEEEE
Q 004785 232 LRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 232 ~~h~~~V~sVaFSPdG~~Llat 253 (730)
..+...+..++++++|..+++.
T Consensus 188 ~~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 188 FTDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp CSSCCSEEEEEECTTCCEEEEE
T ss_pred ccCCCCceEEEECCCCCEEEEE
Confidence 2233678999999999644443
No 202
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.74 E-value=5.3e-07 Score=93.79 Aligned_cols=175 Identities=11% Similarity=-0.003 Sum_probs=116.2
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC--CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC---
Q 004785 74 FEAGRDARRGLASWVEAESLHHLRPKYC--PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH--- 148 (730)
Q Consensus 74 l~a~~d~g~~L~Sgs~DgsIrlWd~~t~--~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH--- 148 (730)
..+..+++..+++...++.|..|+.... .+..+...+..++++++|+++++...++.|.+||.. ++........
T Consensus 50 p~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~ 128 (305)
T 3dr2_A 50 PAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGK 128 (305)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTE
T ss_pred CeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCC
Confidence 3334344446778888888999987422 233456678999999999977766667899999986 6533222111
Q ss_pred -CCCcEEEEEccCCCCEEEE----EeC-------------CCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE
Q 004785 149 -RRTPWVVRFHPLNPTIIAS----GSL-------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 149 -~~~V~sVafSP~dg~lLaS----gS~-------------DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS 210 (730)
...+..+++++ +++++++ |.. .+.|..||..+++..... .....+.++|+|||+.|+++.
T Consensus 129 ~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~ 206 (305)
T 3dr2_A 129 RLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQ 206 (305)
T ss_dssp ECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEE
T ss_pred ccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEe
Confidence 13467899999 8888886 332 256888888777655444 445678899999999888776
Q ss_pred C-------CeEEEEEcCCCccccCCeEE-ecCCCCeEEEEEccCCCeEEE
Q 004785 211 G-------HKLYIWRYNMREETSSPRIV-LRTRRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 211 d-------d~I~VWDl~t~~~~~~~~~l-~~h~~~V~sVaFSPdG~~Lla 252 (730)
. +.|++||+.... +.....+ .........++++++|+.+++
T Consensus 207 ~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~ 255 (305)
T 3dr2_A 207 TPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS 255 (305)
T ss_dssp CCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEEC
T ss_pred cCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEe
Confidence 4 359999987654 2111111 112334567889999984443
No 203
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.70 E-value=7.9e-07 Score=92.37 Aligned_cols=167 Identities=13% Similarity=0.061 Sum_probs=124.7
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCCC----CCCC-CCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCeEEEEEec----
Q 004785 78 RDARRGLASWVEAESLHHLRPKYCP----LSPP-PRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSCLKVLHG---- 147 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~~----L~gH-~~~Vt~lafSPDG~~LaSgS~-DgtVrVWDl~tg~~l~~l~g---- 147 (730)
..++..++ +.++.|..||. +++ +..+ ...+.++.+.+||++|++.+. ++.|..+|. +|+.+..+..
T Consensus 45 ~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~ 120 (276)
T 3no2_A 45 TKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI 120 (276)
T ss_dssp CTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC
T ss_pred CCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC
Confidence 34555555 45677888887 442 2232 346889999999999999887 788888885 7887777652
Q ss_pred --CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCcc
Q 004785 148 --HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREE 224 (730)
Q Consensus 148 --H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd-~I~VWDl~t~~~ 224 (730)
+......+++.+ +++++++...++.|..||.. |+.+..+.....+.++.+.++|++|++++++ +|..+|..+++.
T Consensus 121 ~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 121 ERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CcccccccCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 212345677888 89999999999999999998 9999988876777888999999999888865 599999988876
Q ss_pred ccCCeEEecC------CCCeEEEEEccCCCeEEEE
Q 004785 225 TSSPRIVLRT------RRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 225 ~~~~~~l~~h------~~~V~sVaFSPdG~~Llat 253 (730)
+. .+... -..+..+...++|..+++.
T Consensus 199 ~w---~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 199 VR---RVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EE---EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EE---EecCCCCCCccccccccceEcCCCCEEEEe
Confidence 44 22211 2347888889999866554
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.67 E-value=1.5e-06 Score=88.91 Aligned_cols=166 Identities=11% Similarity=0.145 Sum_probs=113.3
Q ss_pred CEEEEEeCCCeEEEEeCCCCCC----CC-----CCCCeEEEEECCCCCEEEEEeCC---------------CeEEEEECC
Q 004785 82 RGLASWVEAESLHHLRPKYCPL----SP-----PPRSTIAAAFSPDGKTLASTHGD---------------HTVKIIDCQ 137 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~L----~g-----H~~~Vt~lafSPDG~~LaSgS~D---------------gtVrVWDl~ 137 (730)
..|+.+.....|.+||.+ +++ .. +...+.+++++++|+++++...+ +.|..||..
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred CcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 456666555678889877 532 11 12358899999999888777655 578888866
Q ss_pred CCeEEEEEecCCCCcEEEEEc----cCCCC-EEEEEeCCCcEEEEECC-CCeE-----EEEec-CC-CCeEEEEEcCCCC
Q 004785 138 TGSCLKVLHGHRRTPWVVRFH----PLNPT-IIASGSLDHEVRLWNAS-TAEC-----IGSRD-FY-RPIASIAFHASGE 204 (730)
Q Consensus 138 tg~~l~~l~gH~~~V~sVafS----P~dg~-lLaSgS~DgtVrLWDl~-tg~~-----i~~l~-h~-~~V~sVafSPdG~ 204 (730)
++.... ..+......++|+ | +++ ++++...++.|.+||+. +++. ...+. +. ..+..++++++|+
T Consensus 162 -g~~~~~-~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 238 (314)
T 1pjx_A 162 -GQMIQV-DTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN 238 (314)
T ss_dssp -SCEEEE-EEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC
T ss_pred -CCEEEe-ccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC
Confidence 654333 3334457889999 9 665 45555678899999986 4542 11222 22 5678899999999
Q ss_pred EEEEEE-CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 205 LLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 205 ~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
++++.. ++.|.+||..+++... .+..+...+.+++|+++|++|.++.
T Consensus 239 l~v~~~~~~~i~~~d~~~g~~~~---~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 239 LLVANWGSSHIEVFGPDGGQPKM---RIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEEEETTTEEEEECTTCBSCSE---EEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCEEEEEcCCCCcEeE---EEeCCCCCceeEEECCCCCEEEEEe
Confidence 777765 5669999987655322 3444557899999999999665554
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.63 E-value=7.8e-06 Score=82.48 Aligned_cols=164 Identities=10% Similarity=0.030 Sum_probs=116.1
Q ss_pred CEEEEEeC-CCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe--cCCCCcE
Q 004785 82 RGLASWVE-AESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH--GHRRTPW 153 (730)
Q Consensus 82 ~~L~Sgs~-DgsIrlWd~~t~~L-----~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~--gH~~~V~ 153 (730)
..++.+.. ++.|..||.. +.+ ..+...+.+++++++|.++++...++.|..||.. ++. ..+. .....+.
T Consensus 26 g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~ 102 (299)
T 2z2n_A 26 GKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPY 102 (299)
T ss_dssp SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEE
T ss_pred CCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCce
Confidence 34444444 6889999877 432 2345679999999999988877778899999976 443 3332 3455789
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-c-CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeE
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-D-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRI 230 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~-h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~ 230 (730)
.+++.+ +++++++...++.|.+||. +++..... . ....+..++++++|+++++.. ++.|.+||. +++... ..
T Consensus 103 ~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~ 177 (299)
T 2z2n_A 103 GITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE--FK 177 (299)
T ss_dssp EEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE--EE
T ss_pred eeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE--ee
Confidence 999999 8888888777889999999 66544332 2 345789999999998777665 456999998 544321 11
Q ss_pred EecCCCCeEEEEEccCCCeEEEE
Q 004785 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 231 l~~h~~~V~sVaFSPdG~~Llat 253 (730)
.......+..++++++|+.+++.
T Consensus 178 ~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 178 IPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCCCcceeEEECCCCCEEEEc
Confidence 22334568899999999855543
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.60 E-value=8.4e-06 Score=82.25 Aligned_cols=168 Identities=11% Similarity=0.033 Sum_probs=117.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE-EecCCCCcEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV-LHGHRRTPWV 154 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~-l~gH~~~V~s 154 (730)
.+...++...++.|..|+.... .+......+.+++++++|+++++...++.|.+||. +++.... +..+...+..
T Consensus 67 ~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~ 145 (299)
T 2z2n_A 67 DGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSF 145 (299)
T ss_dssp TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred CCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCce
Confidence 3444444444778888987522 12234557899999999988887777889999998 6654432 2334567899
Q ss_pred EEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE-ec-CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEE
Q 004785 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RD-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIV 231 (730)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~-l~-h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l 231 (730)
+++.+ +++++++...++.|..||. +++.... .. ....+..++++++|+++++.. ++.|.+||. +++... ...
T Consensus 146 i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~ 220 (299)
T 2z2n_A 146 ITLGS-DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE--FKI 220 (299)
T ss_dssp EEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EEC
T ss_pred EEEcC-CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE--EEC
Confidence 99999 7888887777889999999 6765543 22 345688999999999655554 456999998 554321 112
Q ss_pred ecCCCCeEEEEEccCCCeEEEE
Q 004785 232 LRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 232 ~~h~~~V~sVaFSPdG~~Llat 253 (730)
..+...+..++++++|+.+++.
T Consensus 221 ~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 221 PTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp SSTTCCEEEEEECSTTCEEEEE
T ss_pred CCCCCCceeEEECCCCCEEEec
Confidence 2345678999999999855443
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.60 E-value=5.2e-06 Score=86.03 Aligned_cols=175 Identities=12% Similarity=0.061 Sum_probs=113.9
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCCCCC---C-----CCCCeEEEEECCCCCEEEEEeCC---------CeEEEEECCC
Q 004785 76 AGRDARRGLASWVEAESLHHLRPKYCPLS---P-----PPRSTIAAAFSPDGKTLASTHGD---------HTVKIIDCQT 138 (730)
Q Consensus 76 a~~d~g~~L~Sgs~DgsIrlWd~~t~~L~---g-----H~~~Vt~lafSPDG~~LaSgS~D---------gtVrVWDl~t 138 (730)
+....+. ++.+. +..|.+||.+++++. . ....+++++++|+|+++++...+ ..-.||.+..
T Consensus 60 ~~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 60 ALRQSGG-YVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP 137 (297)
T ss_dssp EEBTTSS-EEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT
T ss_pred EECCCCC-EEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC
Confidence 3333444 55444 567889998776321 1 12347899999999977655321 2234444432
Q ss_pred -CeEEEEEecCCCCcEEEEEccCCCC-EEEEEeCCCcEEEEEC--CCCeEE--EE---ec-CCCCeEEEEEcCCCCEEEE
Q 004785 139 -GSCLKVLHGHRRTPWVVRFHPLNPT-IIASGSLDHEVRLWNA--STAECI--GS---RD-FYRPIASIAFHASGELLAV 208 (730)
Q Consensus 139 -g~~l~~l~gH~~~V~sVafSP~dg~-lLaSgS~DgtVrLWDl--~tg~~i--~~---l~-h~~~V~sVafSPdG~~LAs 208 (730)
++... +..+....+.++|+| +++ ++++.+.++.|.+||+ .+++.. .. +. .......++++++|++.++
T Consensus 138 ~g~~~~-~~~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva 215 (297)
T 3g4e_A 138 DHHVKK-YFDQVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA 215 (297)
T ss_dssp TSCEEE-EEEEESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE
T ss_pred CCCEEE-EeeccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 44333 333444578899999 665 5566677889999997 455432 11 11 2356789999999987666
Q ss_pred EEC-CeEEEEEcCCCccccCCeEEecCCCCeEEEEEc-cCCCeEEEEEeeC
Q 004785 209 ASG-HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFH-PHAAPLLLTAEVN 257 (730)
Q Consensus 209 gSd-d~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFS-PdG~~Llatgsvw 257 (730)
..+ +.|.+||..+++... .+..+...+++++|. ||++.|.++....
T Consensus 216 ~~~~~~v~~~d~~tG~~~~---~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 216 CYNGGRVIRLDPVTGKRLQ---TVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EETTTEEEEECTTTCCEEE---EEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EcCCCEEEEEcCCCceEEE---EEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 654 459999998776543 344455789999998 8998887776543
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.57 E-value=7e-06 Score=89.13 Aligned_cols=170 Identities=12% Similarity=0.070 Sum_probs=105.7
Q ss_pred EEEecCCCEEEEEe----------CCCeEEEEeCCCCCCCCC-----------CCCeEEEEECCCCCEEEEEeC--CCeE
Q 004785 75 EAGRDARRGLASWV----------EAESLHHLRPKYCPLSPP-----------PRSTIAAAFSPDGKTLASTHG--DHTV 131 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs----------~DgsIrlWd~~t~~L~gH-----------~~~Vt~lafSPDG~~LaSgS~--DgtV 131 (730)
++...+++.++... .++.|.+||..+.+..+. ......+.|+|||++|+++.. +..|
T Consensus 71 i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v 150 (373)
T 2mad_H 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAV 150 (373)
T ss_pred eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeE
Confidence 33444666666554 367899999876532210 123458999999999999874 5789
Q ss_pred EEEECCCCeEEEE-EecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEE------------------------
Q 004785 132 KIIDCQTGSCLKV-LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG------------------------ 186 (730)
Q Consensus 132 rVWDl~tg~~l~~-l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~------------------------ 186 (730)
.++| .+++.+.. +.... ++.+.|.+.+.+++.+.|+.+.+||. +++.+.
T Consensus 151 ~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 151 GLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence 9999 99998877 54221 13334433344455555555555555 433221
Q ss_pred --------------------------Eec-----------CCCCeEEEEEcCCCCEEEEEEC-----------CeEEEEE
Q 004785 187 --------------------------SRD-----------FYRPIASIAFHASGELLAVASG-----------HKLYIWR 218 (730)
Q Consensus 187 --------------------------~l~-----------h~~~V~sVafSPdG~~LAsgSd-----------d~I~VWD 218 (730)
.+. .......++++||++.|+++.+ +.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 010 0112233778999998887652 3499999
Q ss_pred cCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
+.+.+.+. .+ ........+.|+|||++++.++
T Consensus 305 ~~t~~vv~---~i-~~g~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 305 GLVGQTSS---QI-SLGHDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred CCCCEEEE---EE-ECCCCcCeEEECCCCCeEEEEE
Confidence 98887644 22 3344689999999999444443
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.55 E-value=3.9e-05 Score=83.26 Aligned_cols=125 Identities=10% Similarity=-0.054 Sum_probs=86.6
Q ss_pred eEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEe----------CCCeEEEEECCCCeEEEEEecC-------CC
Q 004785 92 SLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------RR 150 (730)
Q Consensus 92 sIrlWd~~t~~L----~gH~~~Vt~lafSPDG~~LaSgS----------~DgtVrVWDl~tg~~l~~l~gH-------~~ 150 (730)
+|.+||..++++ ..-..+ .++|||||++|+.+. .++.|.+||..+++.+..+... ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 778888877642 222222 899999999999886 3678999999999888776432 12
Q ss_pred CcEEEEEccCCCCEEEEEeC--CCcEEEEECCCCeEEEE-ecCCCCeEEEEEcCCCCEE-EEE-ECCeEEEEEcCCCcc
Q 004785 151 TPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGS-RDFYRPIASIAFHASGELL-AVA-SGHKLYIWRYNMREE 224 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~--DgtVrLWDl~tg~~i~~-l~h~~~V~sVafSPdG~~L-Asg-Sdd~I~VWDl~t~~~ 224 (730)
....++|+| ++++++.+.. ++.|.++| .+++.+.. +..... +.+.|+++.. ++. .++++.+||. +++.
T Consensus 126 ~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 126 YSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred CccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcE
Confidence 356799999 8888877764 57899999 99998877 665443 3445555422 222 2555777777 5543
No 210
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.54 E-value=1e-05 Score=90.35 Aligned_cols=174 Identities=11% Similarity=0.120 Sum_probs=118.2
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC--CCCC-------------CCCeEEEEECCCCCEEEEEeCC------CeEEEEECC
Q 004785 79 DARRGLASWVEAESLHHLRPKYCP--LSPP-------------PRSTIAAAFSPDGKTLASTHGD------HTVKIIDCQ 137 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~~--L~gH-------------~~~Vt~lafSPDG~~LaSgS~D------gtVrVWDl~ 137 (730)
+.+..++.+..+.+|.++|..+.. .+-+ ...-..+..+||| +++++..+ +.|.++|.+
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 445556678888999999986541 1100 1123456788999 77776655 789999999
Q ss_pred CCeEEEEEecCCC---CcEEEEEccCCCCEEEEEe-------------------CCCcEEEEECCCCeEEEEecCC---C
Q 004785 138 TGSCLKVLHGHRR---TPWVVRFHPLNPTIIASGS-------------------LDHEVRLWNASTAECIGSRDFY---R 192 (730)
Q Consensus 138 tg~~l~~l~gH~~---~V~sVafSP~dg~lLaSgS-------------------~DgtVrLWDl~tg~~i~~l~h~---~ 192 (730)
+++.+..+....+ .-+.+.|+| +++.+++.. .+.+|.+||+.+++.+..+... .
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9999988863322 234588899 888888874 3789999999999888877653 2
Q ss_pred CeEEEEE--cCCCCEEEEEEC-----C--eEEEEEcCCCccccCCeEE-------ec-----------CCCCeEEEEEcc
Q 004785 193 PIASIAF--HASGELLAVASG-----H--KLYIWRYNMREETSSPRIV-------LR-----------TRRSLRAVHFHP 245 (730)
Q Consensus 193 ~V~sVaf--SPdG~~LAsgSd-----d--~I~VWDl~t~~~~~~~~~l-------~~-----------h~~~V~sVaFSP 245 (730)
....+.| +|+|+++++++. . .|.+|..+.++... ...+ .. .......+.+|+
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE-EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE-EEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 3445656 999998888764 3 37776665432111 0000 00 024578899999
Q ss_pred CCCeEEEEEe
Q 004785 246 HAAPLLLTAE 255 (730)
Q Consensus 246 dG~~Llatgs 255 (730)
||++|.++..
T Consensus 331 DGrfLYVSnr 340 (462)
T 2ece_A 331 DDKFLYLSLW 340 (462)
T ss_dssp TSCEEEEEET
T ss_pred CCCEEEEEeC
Confidence 9998887754
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.47 E-value=7.2e-06 Score=90.01 Aligned_cols=171 Identities=9% Similarity=-0.025 Sum_probs=112.3
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEEeCCC--eEEEEECCCCeEEEEE----
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVL---- 145 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~~L~---gH~~~Vt~lafSPDG~~LaSgS~Dg--tVrVWDl~tg~~l~~l---- 145 (730)
++....+..+++...++.|+.||.+++.+. ....... ++|+++++.|+++..++ .|.+||...+.....+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~ 214 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLG 214 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECC
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeecc
Confidence 333344555555556789999999876321 1122233 99999999999988765 8999998776554444
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE----e-cCCCCe--EEEEEcCCCCEEEEEE--CCeEEE
Q 004785 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS----R-DFYRPI--ASIAFHASGELLAVAS--GHKLYI 216 (730)
Q Consensus 146 ~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~----l-~h~~~V--~sVafSPdG~~LAsgS--dd~I~V 216 (730)
......+.+++++|+++.+++ +..++.|+.||..++..... . ...... ..++|+|++..|+++. .+.|+.
T Consensus 215 ~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~ 293 (409)
T 3hrp_A 215 STFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYK 293 (409)
T ss_dssp TTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred chhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEE
Confidence 224566889999994455444 67788999999987764332 1 112222 3999999766666665 345999
Q ss_pred EEcCCCccccCCeEEecC---------------CCCeEEEEEccCCCeEEE
Q 004785 217 WRYNMREETSSPRIVLRT---------------RRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 217 WDl~t~~~~~~~~~l~~h---------------~~~V~sVaFSPdG~~Lla 252 (730)
||...... .+.++ -.....++|+++|+.+++
T Consensus 294 ~~~~g~~~-----~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 294 ITPDGECE-----WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp ECTTCCEE-----EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred EecCCCEE-----EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 98764311 22222 235789999999994444
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.46 E-value=1.6e-05 Score=83.81 Aligned_cols=165 Identities=13% Similarity=0.075 Sum_probs=107.4
Q ss_pred EEEEEeCCCeEEEEeCCCCCCC---C----C-CCCeEEEEECCCCCEEEEEeC------CCeEEEEECCCCeEEEEEecC
Q 004785 83 GLASWVEAESLHHLRPKYCPLS---P----P-PRSTIAAAFSPDGKTLASTHG------DHTVKIIDCQTGSCLKVLHGH 148 (730)
Q Consensus 83 ~L~Sgs~DgsIrlWd~~t~~L~---g----H-~~~Vt~lafSPDG~~LaSgS~------DgtVrVWDl~tg~~l~~l~gH 148 (730)
.++.+..+ .|.+||..++++. . . ...+.+++++++|+++++... .+.|..+| +++.. .+..+
T Consensus 102 ~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~ 177 (326)
T 2ghs_A 102 KQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD 177 (326)
T ss_dssp EEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE
T ss_pred eEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC
Confidence 34444444 4889998766421 1 1 235889999999997765542 24566666 56543 33333
Q ss_pred CCCcEEEEEccCCCCE-EEEEeCCCcEEEEECC--CC-eE-----EEEec-CCCCeEEEEEcCCCCEEEEEE-CCeEEEE
Q 004785 149 RRTPWVVRFHPLNPTI-IASGSLDHEVRLWNAS--TA-EC-----IGSRD-FYRPIASIAFHASGELLAVAS-GHKLYIW 217 (730)
Q Consensus 149 ~~~V~sVafSP~dg~l-LaSgS~DgtVrLWDl~--tg-~~-----i~~l~-h~~~V~sVafSPdG~~LAsgS-dd~I~VW 217 (730)
......++|+| +++. +++.+.++.|.+||+. ++ +. ...+. .......++++++|+++++.. +++|.+|
T Consensus 178 ~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 178 ISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY 256 (326)
T ss_dssp ESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred CcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEE
Confidence 34577899999 6664 4555667899999986 55 31 22222 234578899999998766655 4669999
Q ss_pred EcCCCccccCCeEEecCCCCeEEEEEc-cCCCeEEEEEee
Q 004785 218 RYNMREETSSPRIVLRTRRSLRAVHFH-PHAAPLLLTAEV 256 (730)
Q Consensus 218 Dl~t~~~~~~~~~l~~h~~~V~sVaFS-PdG~~Llatgsv 256 (730)
|. .++... .+..+...+.+++|+ ++++.|+++...
T Consensus 257 d~-~g~~~~---~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 257 DT-DGNHIA---RYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CT-TCCEEE---EEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CC-CCCEEE---EEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 98 344322 334455679999998 898877666543
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.46 E-value=3.9e-05 Score=77.38 Aligned_cols=167 Identities=10% Similarity=0.013 Sum_probs=115.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE-EEecCCCCcE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK-VLHGHRRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~-----L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~-~l~gH~~~V~ 153 (730)
.+...++...++.|.+||.. ++ +..+...+.+++++++|+++++...++.|.+||.. ++... .+......+.
T Consensus 30 ~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~ 107 (300)
T 2qc5_A 30 DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPY 107 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE
T ss_pred CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCc
Confidence 34433343457888889877 43 22344679999999999888777668899999987 65432 2222446789
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE-ec-CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeE
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RD-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRI 230 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~-l~-h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~ 230 (730)
.+++.+ +++++++...++.|..||.. ++.... +. ....+..++++++|+++++.. ++.|.+||. +++... ..
T Consensus 108 ~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~ 182 (300)
T 2qc5_A 108 GITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE--YP 182 (300)
T ss_dssp EEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EE
T ss_pred cceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE--ee
Confidence 999998 88888887778899999987 655432 22 346789999999999555544 456999998 443321 11
Q ss_pred EecCCCCeEEEEEccCCCeEEEE
Q 004785 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 231 l~~h~~~V~sVaFSPdG~~Llat 253 (730)
.......+..++++++|..+++.
T Consensus 183 ~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 183 LPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCCCCcceEEECCCCCEEEEc
Confidence 22334578999999999855543
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.44 E-value=4.8e-05 Score=76.67 Aligned_cols=167 Identities=10% Similarity=0.027 Sum_probs=115.2
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE-EecCCCCcE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV-LHGHRRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~-----L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~-l~gH~~~V~ 153 (730)
.+...++...++.|..||.. ++ +......+.+++++++|+++++...++.|..||.. ++.... +......+.
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~ 149 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPA 149 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE
T ss_pred CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCce
Confidence 34444444446789999877 42 22234678999999999888877768899999987 654422 333456788
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeE
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRI 230 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l--~h~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t~~~~~~~~~ 230 (730)
.+++.+ +++++++...++.|..||. +++..... .....+..++++++|+++++... +.|.+||. +++... ..
T Consensus 150 ~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~ 224 (300)
T 2qc5_A 150 FITLGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE--YD 224 (300)
T ss_dssp EEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EE
T ss_pred eEEECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE--EE
Confidence 999999 7787777777889999998 56554432 23456889999999986665543 45999998 333211 11
Q ss_pred EecCCCCeEEEEEccCCCeEEEE
Q 004785 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 231 l~~h~~~V~sVaFSPdG~~Llat 253 (730)
.......+.+++++++|+.+++.
T Consensus 225 ~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 225 IPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEE
T ss_pred CCCCCCCceEEEECCCCCEEEec
Confidence 22345678999999999855444
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.43 E-value=6.3e-06 Score=87.45 Aligned_cols=148 Identities=9% Similarity=-0.019 Sum_probs=101.2
Q ss_pred CCCCCeEEEEECCCCCEEEEEeC-----CCeEEEEECCCCeEEEEEecC------CCCcEEEEEccCCCCEEEEEe---C
Q 004785 105 PPPRSTIAAAFSPDGKTLASTHG-----DHTVKIIDCQTGSCLKVLHGH------RRTPWVVRFHPLNPTIIASGS---L 170 (730)
Q Consensus 105 gH~~~Vt~lafSPDG~~LaSgS~-----DgtVrVWDl~tg~~l~~l~gH------~~~V~sVafSP~dg~lLaSgS---~ 170 (730)
+|...+.+++|+++|+++++-.. +..|.+||+.+++.++.+... ...+..++++++++.++++-. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999887665544 579999999999977777532 234688999984556666665 6
Q ss_pred CCcEEEEECCCCeEEEEecC------------------------------CCCeEEEEEcCCCCEEEEEECC--eEEEEE
Q 004785 171 DHEVRLWNASTAECIGSRDF------------------------------YRPIASIAFHASGELLAVASGH--KLYIWR 218 (730)
Q Consensus 171 DgtVrLWDl~tg~~i~~l~h------------------------------~~~V~sVafSPdG~~LAsgSdd--~I~VWD 218 (730)
++.|.+||+.+++....+.. ...++.++|+|||+.|+++... .|+.++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 88999999998876654421 0236889999999999888743 366665
Q ss_pred cCC---Cc----cccCCeEEecCCCCeEEEEEccCCCeEEE
Q 004785 219 YNM---RE----ETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 219 l~t---~~----~~~~~~~l~~h~~~V~sVaFSPdG~~Lla 252 (730)
... +. .........++......++++++|..+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va 264 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVG 264 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEE
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEE
Confidence 421 11 00001122234445678999999985554
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.43 E-value=1.3e-05 Score=88.11 Aligned_cols=241 Identities=13% Similarity=0.080 Sum_probs=141.9
Q ss_pred EEEecCCCEEEEEe----------CCCeEEEEeCCCCCCCC-----C------CCCeEEEEECCCCCEEEEEeC--CCeE
Q 004785 75 EAGRDARRGLASWV----------EAESLHHLRPKYCPLSP-----P------PRSTIAAAFSPDGKTLASTHG--DHTV 131 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs----------~DgsIrlWd~~t~~L~g-----H------~~~Vt~lafSPDG~~LaSgS~--DgtV 131 (730)
++...+++.++... .++.|.+||..+.+... . ......+.|+|||++|+++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 44445566565443 46789999998874221 1 124557999999999998864 6899
Q ss_pred EEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCC-CeEEEEec-C----CCCe-EEEEEc-CCC
Q 004785 132 KIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECIGSRD-F----YRPI-ASIAFH-ASG 203 (730)
Q Consensus 132 rVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~t-g~~i~~l~-h----~~~V-~sVafS-PdG 203 (730)
.++|+.+++.+..+.... +..+.|.+.+.+++.+.||++.+.++.+ ++...... . ...+ ....|. ++|
T Consensus 163 sVID~~t~~vv~tI~v~g----~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD----CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEECCCCcEEEEEECCC----cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 999999999998886422 1223353677888889999999999986 55432211 1 1222 224664 788
Q ss_pred CEEEEEECCeEEEEEcCCCccccCCeEE-ec--------CCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCc
Q 004785 204 ELLAVASGHKLYIWRYNMREETSSPRIV-LR--------TRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGY 274 (730)
Q Consensus 204 ~~LAsgSdd~I~VWDl~t~~~~~~~~~l-~~--------h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~ 274 (730)
+++++..++.|++.|+............ .. .......++++++++++..+.....-.+
T Consensus 239 ~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~------------- 305 (386)
T 3sjl_D 239 RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR------------- 305 (386)
T ss_dssp EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC-------------
T ss_pred cEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccc-------------
Confidence 7777666677999999765421101110 00 1123345777999988877654221110
Q ss_pred ccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCC-EEEEEecCCCCCcccceeecCCC
Q 004785 275 WRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDE-RISLQHTEHDSGATRTQQSLRSS 339 (730)
Q Consensus 275 ~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~-rI~~~~~~~dsgs~~~~~~~~ss 339 (730)
.+.+...|.+.|..+.+....... .-+.+.+.|++|++ ++++. +. ...++++.|..+.
T Consensus 306 hk~~~~~V~viD~~t~kv~~~i~v----g~~~~~lavs~D~~~~ly~t-n~--~~~~VsViD~~t~ 364 (386)
T 3sjl_D 306 HKTASRFVVVLDAKTGERLAKFEM----GHEIDSINVSQDEKPLLYAL-ST--GDKTLYIHDAESG 364 (386)
T ss_dssp TTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECSSSSCEEEEE-ET--TTTEEEEEETTTC
T ss_pred cCCCCCEEEEEECCCCeEEEEEEC----CCCcceEEECCCCCeEEEEE-cC--CCCeEEEEECCCC
Confidence 011223455555444433222211 11456899999998 55542 21 2334556665533
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.42 E-value=1.4e-06 Score=95.73 Aligned_cols=120 Identities=12% Similarity=-0.005 Sum_probs=96.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
++..|+.+ .++.|++||.... .+..|...|.++.+.+. .+++++.||.|.+||+.++.... +...|.++
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v 168 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSF 168 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEE
Confidence 56777777 8899999998653 24456777888888764 38889999999999999887643 34579999
Q ss_pred EEccCCCCEEEEEeCCCcEEEEECCCCeE--EEEe----------cCCCCeEEEEEcCCCCEEEEE
Q 004785 156 RFHPLNPTIIASGSLDHEVRLWNASTAEC--IGSR----------DFYRPIASIAFHASGELLAVA 209 (730)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~tg~~--i~~l----------~h~~~V~sVafSPdG~~LAsg 209 (730)
+|+| ++ ++.|..||++++|+...++. .+.+ .|...|.+|.|.+++++|++=
T Consensus 169 ~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 169 DVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999 66 67899999999999988775 4445 256789999999999988754
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.40 E-value=1.7e-05 Score=86.97 Aligned_cols=168 Identities=10% Similarity=-0.046 Sum_probs=111.5
Q ss_pred cCCCEEEEEeCCC--eEEEEeCCCCC----C----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE----
Q 004785 79 DARRGLASWVEAE--SLHHLRPKYCP----L----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV---- 144 (730)
Q Consensus 79 d~g~~L~Sgs~Dg--sIrlWd~~t~~----L----~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~---- 144 (730)
..+..|+....++ .|..|+..... + ......+.+++++|++..|+.+..++.|+.||..++.....
T Consensus 180 ~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~ 259 (409)
T 3hrp_A 180 KDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE 259 (409)
T ss_dssp TTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC
T ss_pred cCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc
Confidence 4455666666654 78888876432 1 22456688999999555566677788999999988764332
Q ss_pred EecCCCCc-E-EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC---------------CCeEEEEEcCCCCEEE
Q 004785 145 LHGHRRTP-W-VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY---------------RPIASIAFHASGELLA 207 (730)
Q Consensus 145 l~gH~~~V-~-sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~---------------~~V~sVafSPdG~~LA 207 (730)
..++...- . .++|+|+++.++++-..++.|+.||.... .....+.. .....++|+|+|++++
T Consensus 260 ~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyv 338 (409)
T 3hrp_A 260 LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYI 338 (409)
T ss_dssp CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEE
T ss_pred ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEE
Confidence 22333322 3 89999966777777778899999998643 33323321 3478999999999555
Q ss_pred EEE-C-CeEEEEEcCCCccccCCeEEecC---------------CCCeEEEEEccCCCeEE
Q 004785 208 VAS-G-HKLYIWRYNMREETSSPRIVLRT---------------RRSLRAVHFHPHAAPLL 251 (730)
Q Consensus 208 sgS-d-d~I~VWDl~t~~~~~~~~~l~~h---------------~~~V~sVaFSPdG~~Ll 251 (730)
+-+ . +.|++||+.++... .+.++ -.....++++++|..++
T Consensus 339 ad~~~~~~I~~~~~~~G~v~----~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyV 395 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDGYVS----TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWI 395 (409)
T ss_dssp EETTTTCEEEEEETTTTEEE----EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEE
T ss_pred EeCCCCCEEEEEECCCCEEE----EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEE
Confidence 554 3 34999997766532 22222 24578999999976444
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.38 E-value=3.6e-05 Score=85.57 Aligned_cols=97 Identities=10% Similarity=0.010 Sum_probs=74.7
Q ss_pred CeEEEEeCCCCCCC----CCCCCeEEEEECCCCCEEEEEe----------CCCeEEEEECCCCeEEEEEecC-------C
Q 004785 91 ESLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------R 149 (730)
Q Consensus 91 gsIrlWd~~t~~L~----gH~~~Vt~lafSPDG~~LaSgS----------~DgtVrVWDl~tg~~l~~l~gH-------~ 149 (730)
+.|.++|..+.++. --..+ .++++|||++|+++. .++.|.++|..+++.+..+.-- .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 68999998876422 11223 799999999998886 3678999999999998887532 2
Q ss_pred CCcEEEEEccCCCCEEEEEeC--CCcEEEEECCCCeEEEEecC
Q 004785 150 RTPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGSRDF 190 (730)
Q Consensus 150 ~~V~sVafSP~dg~lLaSgS~--DgtVrLWDl~tg~~i~~l~h 190 (730)
.....+.|+| ++++++.+.. +++|.+.|+.+++.+..+..
T Consensus 177 ~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 177 TYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 3456799999 8887777664 67899999999998877654
No 220
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.25 E-value=3.1e-05 Score=80.76 Aligned_cols=171 Identities=8% Similarity=0.010 Sum_probs=117.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCCCC--CCCeE--EEEECCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCcEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCPLSPP--PRSTI--AAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~L~gH--~~~Vt--~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~~~V~s 154 (730)
++...++.+.++.|+.+|++++++... ..... .+++ +++.|+.. -.++.+.+||.++.+.+..+..- ..-+.
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwG 140 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWG 140 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCC
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeE
Confidence 566666777888999999998854321 22233 3555 45555554 45889999999999999998743 33345
Q ss_pred EEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC---C---CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCcccc
Q 004785 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---Y---RPIASIAFHASGELLAVAS--GHKLYIWRYNMREETS 226 (730)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h---~---~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~~~~~ 226 (730)
+++ +++.|+.+..++.|.++|..+.+.+..+.- . ..++.+.|. +|+ |++.. ++.|.+.|..+++...
T Consensus 141 Lt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 141 LCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEE
T ss_pred Eec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEE
Confidence 554 445555556688999999999988877542 1 245677887 775 44454 4569999999987644
Q ss_pred CCeEE----------ecCCCCeEEEEEccCCCeEEEEEeeCC
Q 004785 227 SPRIV----------LRTRRSLRAVHFHPHAAPLLLTAEVND 258 (730)
Q Consensus 227 ~~~~l----------~~h~~~V~sVaFSPdG~~Llatgsvwd 258 (730)
..... .....-.+.|+|+|+++.|+.|++.|.
T Consensus 216 ~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp 257 (268)
T 3nok_A 216 VIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWP 257 (268)
T ss_dssp EEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCS
T ss_pred EEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCC
Confidence 11110 011245689999999999999999885
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.25 E-value=2.6e-05 Score=86.67 Aligned_cols=133 Identities=11% Similarity=-0.029 Sum_probs=96.0
Q ss_pred CCCCEEEEEeCC-----CeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----------CCCcEEEEECCC
Q 004785 117 PDGKTLASTHGD-----HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRLWNAST 181 (730)
Q Consensus 117 PDG~~LaSgS~D-----gtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS----------~DgtVrLWDl~t 181 (730)
++++.+++.... +.|.++|..+++.+..+..-..+ .++++| +++.++.+. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 478877776553 69999999999999998755554 899999 666555554 467899999999
Q ss_pred CeEEEEecCC--------CCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEecC------CCCeEEEEEc
Q 004785 182 AECIGSRDFY--------RPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRT------RRSLRAVHFH 244 (730)
Q Consensus 182 g~~i~~l~h~--------~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~h------~~~V~sVaFS 244 (730)
++.+..+... .....+.|+|||++|+++.. +.|.+.|+.+.+..... .... ...-..+.++
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I--~v~g~~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRML--DVPDCYHIFPASPTVFYMNC 236 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE--ECCSEEEEEEEETTEEEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEE--EcCCceeeccCCCcEEEEEc
Confidence 9988776432 34567899999999999872 45999999998765411 1110 0112346788
Q ss_pred cCCCeEEEEE
Q 004785 245 PHAAPLLLTA 254 (730)
Q Consensus 245 PdG~~Llatg 254 (730)
+||+.++...
T Consensus 237 ~dG~~~~V~~ 246 (426)
T 3c75_H 237 RDGSLARVDF 246 (426)
T ss_dssp TTSSEEEEEC
T ss_pred CCCCEEEEEC
Confidence 8888666554
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.22 E-value=4.3e-05 Score=80.97 Aligned_cols=163 Identities=9% Similarity=-0.029 Sum_probs=104.4
Q ss_pred CCeEEEEeCCCCCC----------CCCCCCeEEEEECCCCCEE-EEEe---CCCeEEEEECCCCeEEEEEecCC------
Q 004785 90 AESLHHLRPKYCPL----------SPPPRSTIAAAFSPDGKTL-ASTH---GDHTVKIIDCQTGSCLKVLHGHR------ 149 (730)
Q Consensus 90 DgsIrlWd~~t~~L----------~gH~~~Vt~lafSPDG~~L-aSgS---~DgtVrVWDl~tg~~l~~l~gH~------ 149 (730)
+.+|.+||.+++++ ..+...+..+++++++..+ ++-. .++.|.+||..+++..+.+.+|.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 46888888876631 1233457899999865454 4444 57899999999888776664431
Q ss_pred -----------------------CCcEEEEEccCCCCEEEEEeCCC-cEEEEECC---CCe--------EEEEecCCCCe
Q 004785 150 -----------------------RTPWVVRFHPLNPTIIASGSLDH-EVRLWNAS---TAE--------CIGSRDFYRPI 194 (730)
Q Consensus 150 -----------------------~~V~sVafSP~dg~lLaSgS~Dg-tVrLWDl~---tg~--------~i~~l~h~~~V 194 (730)
..+..|+|+| +++.++.+..++ .|..+|.. .+. .+....+....
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~p 250 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPIC 250 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSC
T ss_pred cceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCC
Confidence 1257899999 777777776655 45444431 111 01122333456
Q ss_pred EEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 195 ASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 195 ~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
..++++++|+++++.. ++.|.+||..+++... .....+...+..++|.++|+.++++..
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~--~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRAYKL--LVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTEEEE--EEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCCEEE--EEECCceecCCeeEECCCCcEEEEeCc
Confidence 6799999998777766 4569999984454211 111122456899999999886665553
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.21 E-value=1.8e-05 Score=82.04 Aligned_cols=139 Identities=9% Similarity=0.019 Sum_probs=99.4
Q ss_pred CCCeEEEEECCCCC-EEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE
Q 004785 107 PRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI 185 (730)
Q Consensus 107 ~~~Vt~lafSPDG~-~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i 185 (730)
........|+++|+ ++++...++.|..|+. +++ ...+..+...+..+++++ +++++++...++.|.+||.. ++..
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCEE
Confidence 34567899999998 5667777899999998 555 455666777899999999 88877776667889999986 6543
Q ss_pred EEecC-----CCCeEEEEEcCCCCEEEE----EE--------------CCeEEEEEcCCCccccCCeEEecCCCCeEEEE
Q 004785 186 GSRDF-----YRPIASIAFHASGELLAV----AS--------------GHKLYIWRYNMREETSSPRIVLRTRRSLRAVH 242 (730)
Q Consensus 186 ~~l~h-----~~~V~sVafSPdG~~LAs----gS--------------dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVa 242 (730)
..... ...++.++++|+|+++++ |. .+.|+.||..+++... +. .......++
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~----~~-~~~~p~gl~ 194 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR----MA-DLDHPNGLA 194 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE----EE-EESSEEEEE
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE----Ee-cCCCCcceE
Confidence 33221 234678999999998876 32 1237777776655322 22 334678899
Q ss_pred EccCCCeEEEEE
Q 004785 243 FHPHAAPLLLTA 254 (730)
Q Consensus 243 FSPdG~~Llatg 254 (730)
|+||++.|+.+.
T Consensus 195 ~spdg~~lyv~~ 206 (305)
T 3dr2_A 195 FSPDEQTLYVSQ 206 (305)
T ss_dssp ECTTSSEEEEEE
T ss_pred EcCCCCEEEEEe
Confidence 999999776654
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.20 E-value=1.1e-05 Score=88.49 Aligned_cols=138 Identities=11% Similarity=0.025 Sum_probs=98.7
Q ss_pred EEECCCCCEEEEEeC-----CCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----------CCCcEEEE
Q 004785 113 AAFSPDGKTLASTHG-----DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRLW 177 (730)
Q Consensus 113 lafSPDG~~LaSgS~-----DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS----------~DgtVrLW 177 (730)
....||++.++.... ++.|.++|..+++.+..+..-..+ . ++++| ++++++.++ .++.|.+|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~sp-DG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVAD-DGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECC-CCCEEEEEcccccccccCCCCCEEEEE
Confidence 455789999888865 679999999999999998765554 4 99999 666665554 46789999
Q ss_pred ECCCCeEEEEecCC--------CCeEEEEEcCCCCEEEEEE---CCeEEEEEcCCCccccCCeEEecC-----CCCeEEE
Q 004785 178 NASTAECIGSRDFY--------RPIASIAFHASGELLAVAS---GHKLYIWRYNMREETSSPRIVLRT-----RRSLRAV 241 (730)
Q Consensus 178 Dl~tg~~i~~l~h~--------~~V~sVafSPdG~~LAsgS---dd~I~VWDl~t~~~~~~~~~l~~h-----~~~V~sV 241 (730)
|..+++.+..+... .....++|+|||++|+++. ++.|.++|+.+.+...... ..+. ...-.-+
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~-v~g~~~~~P~g~~~~~ 193 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD-VPDCYHIFPTAPDTFF 193 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSEEEEEEEETTEEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE-CCCcceeecCCCceeE
Confidence 99999988876422 2456799999999999886 2459999999987654110 0000 0011124
Q ss_pred EEccCCCeEEEEE
Q 004785 242 HFHPHAAPLLLTA 254 (730)
Q Consensus 242 aFSPdG~~Llatg 254 (730)
..++||+.++...
T Consensus 194 ~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 194 MHCRDGSLAKVAF 206 (386)
T ss_dssp EEETTSCEEEEEC
T ss_pred EECCCCCEEEEEC
Confidence 6778887655544
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.20 E-value=3.8e-05 Score=85.73 Aligned_cols=164 Identities=10% Similarity=0.020 Sum_probs=109.0
Q ss_pred CeEEEEeCCCCCCC------CCC-CCeEEEEECCCCCEEEEEe-------------------CCCeEEEEECCCCeEEEE
Q 004785 91 ESLHHLRPKYCPLS------PPP-RSTIAAAFSPDGKTLASTH-------------------GDHTVKIIDCQTGSCLKV 144 (730)
Q Consensus 91 gsIrlWd~~t~~L~------gH~-~~Vt~lafSPDG~~LaSgS-------------------~DgtVrVWDl~tg~~l~~ 144 (730)
+.|.++|.++.++. ... .--+.+-|+|+++.+++.. .+.+|.+||+.+++.+..
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 67899998876322 122 2244688899999888884 368999999999988888
Q ss_pred EecC-C-CCcEEEEE--ccCCCCEEEEEe------CCCcEEEEECCCCeEE--EEe--cC-----------------CCC
Q 004785 145 LHGH-R-RTPWVVRF--HPLNPTIIASGS------LDHEVRLWNASTAECI--GSR--DF-----------------YRP 193 (730)
Q Consensus 145 l~gH-~-~~V~sVaf--SP~dg~lLaSgS------~DgtVrLWDl~tg~~i--~~l--~h-----------------~~~ 193 (730)
+..- . .....|.| +| ++++++.++ .+++|.+|....++.. +.+ .. ...
T Consensus 244 I~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp EESCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred EecCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 7642 1 23455666 99 666665554 6778888766555321 111 10 245
Q ss_pred eEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeEE-ecCC-------------CCeEEEEEccCCCeEEEEEe
Q 004785 194 IASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRIV-LRTR-------------RSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 194 V~sVafSPdG~~LAsgSd--d~I~VWDl~t~~~~~~~~~l-~~h~-------------~~V~sVaFSPdG~~Llatgs 255 (730)
...|.+||||++|+++.. +.|.+||+...........+ .+.. ...+.+.++|||++|+++.+
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 678999999999999983 45999998643221101111 1100 13588999999999888875
No 226
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.19 E-value=3.2e-05 Score=80.48 Aligned_cols=173 Identities=8% Similarity=0.023 Sum_probs=112.8
Q ss_pred CCCEEEEEeCCC--eEEEEeCCCCCCCC---CCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCeEEEEEecCCCCcE
Q 004785 80 ARRGLASWVEAE--SLHHLRPKYCPLSP---PPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~Dg--sIrlWd~~t~~L~g---H~~~Vt~lafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~~l~gH~~~V~ 153 (730)
++....+.+.++ .|+.+|++++++.. -..........++++.|+... .++.+.+||.++.+.+..+.... .=+
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~ 130 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGW 130 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-Cce
Confidence 345555655555 89999999885321 112333322333456666655 48899999999999999987432 223
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC---C---CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccc
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---Y---RPIASIAFHASGELLAVAS--GHKLYIWRYNMREET 225 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h---~---~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~~~~ 225 (730)
.++ +++..++++ ..++.|.++|..+.+.+..+.- . ..++.+.|. +|+ |++.. ++.|.+.|..+++..
T Consensus 131 glt--~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 131 GLT--HNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp CEE--ECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEE
T ss_pred EEe--cCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEE
Confidence 444 424444444 4578899999999988777542 1 345667886 675 44454 456999999998864
Q ss_pred cCCeE--E-------ecCCCCeEEEEEccCCCeEEEEEeeCC
Q 004785 226 SSPRI--V-------LRTRRSLRAVHFHPHAAPLLLTAEVND 258 (730)
Q Consensus 226 ~~~~~--l-------~~h~~~V~sVaFSPdG~~Llatgsvwd 258 (730)
..... + .....-.+.|+|+|+++.|+.+++.|.
T Consensus 206 ~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 206 GIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp EEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS
T ss_pred EEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 41111 0 011235689999999999999999885
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.14 E-value=7.4e-05 Score=77.96 Aligned_cols=168 Identities=8% Similarity=-0.020 Sum_probs=111.7
Q ss_pred EEEEEe---CCCeEEEEeCCCCCCC-----CCCCCeEEEEECCCCCEEEEEeC-CCeEEEEECCCCeEEEEEecCCCCcE
Q 004785 83 GLASWV---EAESLHHLRPKYCPLS-----PPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 83 ~L~Sgs---~DgsIrlWd~~t~~L~-----gH~~~Vt~lafSPDG~~LaSgS~-DgtVrVWDl~tg~~l~~l~gH~~~V~ 153 (730)
.|+... .+++|+.+|..++++. +.......+++. ++.|+.+.. ++.|.++|..+++.+..+..-...
T Consensus 33 ~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~-- 108 (266)
T 2iwa_A 33 TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD-- 108 (266)
T ss_dssp EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--
T ss_pred eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--
Confidence 455443 2578999999987422 111122345554 556666554 789999999999999888632122
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC------CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccc
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------RPIASIAFHASGELLAVAS--GHKLYIWRYNMREET 225 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~------~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~~~~ 225 (730)
...+++++..+++ +..+++|.++|..+.+.+..+.-. ...+.+.|. +|+ |++.. ++.|.+.|..+++..
T Consensus 109 g~glt~Dg~~l~v-s~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 109 GWGLATDGKILYG-SDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE-VWANIWQTDCIARISAKDGTLL 185 (266)
T ss_dssp CCEEEECSSSEEE-ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTTCCEE
T ss_pred eEEEEECCCEEEE-ECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE-EEEecCCCCeEEEEECCCCcEE
Confidence 2345563444554 456889999999998887775422 246788888 774 55554 456999999998865
Q ss_pred cCCeEEec-----------CCCCeEEEEEccCCCeEEEEEeeCC
Q 004785 226 SSPRIVLR-----------TRRSLRAVHFHPHAAPLLLTAEVND 258 (730)
Q Consensus 226 ~~~~~l~~-----------h~~~V~sVaFSPdG~~Llatgsvwd 258 (730)
... .+.+ .......++|+|+++++++++..|+
T Consensus 186 ~~I-~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 186 GWI-LLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp EEE-ECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred EEE-ECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 411 1111 0135689999999999999998774
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.08 E-value=4.4e-05 Score=87.77 Aligned_cols=172 Identities=8% Similarity=-0.059 Sum_probs=121.1
Q ss_pred CCCEEE-EEeCCCeEEEEeCCCCCCC-----CCCCCeEEEEE-C-CCCCEEEEEe------------------CCCeEEE
Q 004785 80 ARRGLA-SWVEAESLHHLRPKYCPLS-----PPPRSTIAAAF-S-PDGKTLASTH------------------GDHTVKI 133 (730)
Q Consensus 80 ~g~~L~-Sgs~DgsIrlWd~~t~~L~-----gH~~~Vt~laf-S-PDG~~LaSgS------------------~DgtVrV 133 (730)
+++.++ +-..+..|.+.|+++.+.. ........+++ + |++++++.++ .++.|.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 344444 4445667999999886311 22345889998 5 8999998885 2568999
Q ss_pred EECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCC--------------------------------------cEE
Q 004785 134 IDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH--------------------------------------EVR 175 (730)
Q Consensus 134 WDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dg--------------------------------------tVr 175 (730)
+|.++.+.+.++.--. ....++++| +++++++.+.+. .|.
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 9999999888876433 456789999 788887777543 477
Q ss_pred EEECCC--CeE-EEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccc--------cCCeEEecCCCCeEEEE
Q 004785 176 LWNAST--AEC-IGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREET--------SSPRIVLRTRRSLRAVH 242 (730)
Q Consensus 176 LWDl~t--g~~-i~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~~~~--------~~~~~l~~h~~~V~sVa 242 (730)
+.|.++ ++. +..+.......++.++|||+++++++ ++.|.++|+.+.+.. ........-....+.++
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 888887 544 45555555677899999999999988 456999999865310 00111223356789999
Q ss_pred EccCCCeEEEEE
Q 004785 243 FHPHAAPLLLTA 254 (730)
Q Consensus 243 FSPdG~~Llatg 254 (730)
|+|+| ++.++.
T Consensus 338 F~~dG-~aY~t~ 348 (595)
T 1fwx_A 338 FDGRG-NAYTSL 348 (595)
T ss_dssp ECTTS-EEEEEE
T ss_pred ECCCC-eEEEEE
Confidence 99999 665554
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.08 E-value=2.6e-07 Score=99.94 Aligned_cols=139 Identities=12% Similarity=0.016 Sum_probs=75.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCC-cE-
Q 004785 80 ARRGLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT-PW- 153 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~L----~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~-V~- 153 (730)
.+..++.++.|+.|..||.+++++ .. +.+.+..+..+++.+++++.|+.|+.||.++|+.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567888999999999999988742 22 44555556667888888889999999999999887766543211 10
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccc
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREET 225 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t~~~~ 225 (730)
...+. .+..+++++.|+.|+.||..+|+.+..+.... ...++|++..|++++. +.|+.||.++++..
T Consensus 86 sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 86 SPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred CceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence 01111 34567788889999999999999887765433 2456778888888874 55999999988754
No 230
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.07 E-value=0.00019 Score=73.96 Aligned_cols=174 Identities=14% Similarity=0.096 Sum_probs=112.3
Q ss_pred CCCEEEEEeCC--CeEEEEeCCCCCCCC---CCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCcE
Q 004785 80 ARRGLASWVEA--ESLHHLRPKYCPLSP---PPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~D--gsIrlWd~~t~~L~g---H~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~~~V~ 153 (730)
++....+.+.. ..|+.+|.+++++.. -...........+++.|+.. -.++.+.+||.++.+.+..+.... .-+
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gw 108 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGW 108 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-Cce
Confidence 34444455554 489999999885321 11222222223335555554 458899999999999999987433 234
Q ss_pred EEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC------CCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCcccc
Q 004785 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------RPIASIAFHASGELLAVAS-GHKLYIWRYNMREETS 226 (730)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~------~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~ 226 (730)
.++ ++++.+++| ..++.|.++|..+.+.+..+.-. ..++.+.|. +|+..+... ++.|.+.|..+++...
T Consensus 109 glt--~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 109 ALT--SDDSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp EEE--ECSSCEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred EEe--eCCCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEE
Confidence 555 434455555 55889999999999887775421 355677776 666443332 5669999999987644
Q ss_pred CCeE--E--------ecCCCCeEEEEEccCCCeEEEEEeeCC
Q 004785 227 SPRI--V--------LRTRRSLRAVHFHPHAAPLLLTAEVND 258 (730)
Q Consensus 227 ~~~~--l--------~~h~~~V~sVaFSPdG~~Llatgsvwd 258 (730)
.... + .....-.+.|+|+|+++.|+.+++.|.
T Consensus 185 ~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp 226 (243)
T 3mbr_X 185 WIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWP 226 (243)
T ss_dssp EEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCS
T ss_pred EEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 1110 0 011235689999999999999999885
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.06 E-value=8.4e-05 Score=87.01 Aligned_cols=160 Identities=13% Similarity=0.140 Sum_probs=110.2
Q ss_pred eEEEEeCCCCCC------CCCC-------CCeEEEEECCCC---CEEEEEeCCCeEEEEECCCCeEEEEEecCCCC----
Q 004785 92 SLHHLRPKYCPL------SPPP-------RSTIAAAFSPDG---KTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT---- 151 (730)
Q Consensus 92 sIrlWd~~t~~L------~gH~-------~~Vt~lafSPDG---~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~---- 151 (730)
+|..+|.+++++ ..|. .....+....|| +.|+.++.+|.|+++|.++|+.+..++.....
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 588888887742 2231 223334444477 67899999999999999999988766422100
Q ss_pred -------c------------------------EEEEEccCCCCEEEEEeC------------------------------
Q 004785 152 -------P------------------------WVVRFHPLNPTIIASGSL------------------------------ 170 (730)
Q Consensus 152 -------V------------------------~sVafSP~dg~lLaSgS~------------------------------ 170 (730)
+ ..++|+| +..+++....
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 0 1478899 6666665432
Q ss_pred -------------CCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCCC
Q 004785 171 -------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRR 236 (730)
Q Consensus 171 -------------DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~~ 236 (730)
.+.|..||+.+++.+..+.+...+....+..+|.++++++ ++.+++||..+++.+. .....+..
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw--~~~~~~~~ 520 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW--EAPTGTGV 520 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCC
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee--eeeCCCCc
Confidence 2789999999999998887766666667778888888887 4569999999998754 12223333
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004785 237 SLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 237 ~V~sVaFSPdG~~Llatg 254 (730)
.-.-+.|..+|+.+++..
T Consensus 521 ~~~p~~y~~~G~~~v~~~ 538 (677)
T 1kb0_A 521 VAAPSTYMVDGRQYVSVA 538 (677)
T ss_dssp CSCCEEEEETTEEEEEEE
T ss_pred ccCCEEEEeCCEEEEEEe
Confidence 334556778998666554
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.06 E-value=4.3e-05 Score=83.27 Aligned_cols=87 Identities=11% Similarity=-0.097 Sum_probs=64.1
Q ss_pred eEEEEeCCCCCCC----CCCCCeEEEEECCCCCEEEEEe----------CCCeEEEEECCCCeEEEEEecC-------CC
Q 004785 92 SLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------RR 150 (730)
Q Consensus 92 sIrlWd~~t~~L~----gH~~~Vt~lafSPDG~~LaSgS----------~DgtVrVWDl~tg~~l~~l~gH-------~~ 150 (730)
+|.++|..+.++. .-..+ .+.|+|||++|+++. .+++|.+||+.+++.+..+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 6778888776321 11223 799999999999886 3789999999999999998643 13
Q ss_pred CcEEEEEccCCCCEEEEEeC--CCcEEE--EECCC
Q 004785 151 TPWVVRFHPLNPTIIASGSL--DHEVRL--WNAST 181 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~--DgtVrL--WDl~t 181 (730)
....++|+| ++++++.+.. +..|.+ +|+.+
T Consensus 125 ~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh
Confidence 466799999 7777776654 456888 87743
No 233
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.06 E-value=0.00068 Score=80.08 Aligned_cols=238 Identities=11% Similarity=0.020 Sum_probs=132.1
Q ss_pred cCCCEEE-EEeCCC----eEEEEeCCCC-CCC-CC-CCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCe--EEE
Q 004785 79 DARRGLA-SWVEAE----SLHHLRPKYC-PLS-PP-PRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGS--CLK 143 (730)
Q Consensus 79 d~g~~L~-Sgs~Dg----sIrlWd~~t~-~L~-gH-~~~Vt~lafSPDG~~LaSgS~D-----gtVrVWDl~tg~--~l~ 143 (730)
.+++.|+ +...+| .|+++|+.++ ... .+ ......+.|+|||+.|+....| ..|+++++.++. ...
T Consensus 184 PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~l 263 (751)
T 2xe4_A 184 PEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVC 263 (751)
T ss_dssp TTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEE
T ss_pred CCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEE
Confidence 3555454 333333 4999999887 532 11 1123468999999988887765 368889998764 233
Q ss_pred EEec-CCCCcEEEEEccCCCCEEEEEe---CCCcEEEEECCCC--eE--EEEec-CCCCeEEEEEcCCCCEEEEEE-CC-
Q 004785 144 VLHG-HRRTPWVVRFHPLNPTIIASGS---LDHEVRLWNASTA--EC--IGSRD-FYRPIASIAFHASGELLAVAS-GH- 212 (730)
Q Consensus 144 ~l~g-H~~~V~sVafSP~dg~lLaSgS---~DgtVrLWDl~tg--~~--i~~l~-h~~~V~sVafSPdG~~LAsgS-dd- 212 (730)
.+.. .......+.|+| ++++|+..+ ....|+++|+.++ +. ..... ......++.|+. |+.|+..+ .+
T Consensus 264 v~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~ 341 (751)
T 2xe4_A 264 LYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGG 341 (751)
T ss_dssp EEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTT
T ss_pred EEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCC
Confidence 4432 234456789999 777666544 2446889999875 23 22222 334455666554 55555544 32
Q ss_pred ----eEEEEEcCCCccccCCeE-EecCCCCeEEEEEccCCCeEEEEEeeCCccCCCcceeEeccCCcccCCCCeEEEecC
Q 004785 213 ----KLYIWRYNMREETSSPRI-VLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGA 287 (730)
Q Consensus 213 ----~I~VWDl~t~~~~~~~~~-l~~h~~~V~sVaFSPdG~~Llatgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~ 287 (730)
+|.++|+.+... ... +..+...+.--.|++++.+|+++....... .+.+.+.
T Consensus 342 a~~~~L~~~d~~~~~~---~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~--------------------~l~~~dl 398 (751)
T 2xe4_A 342 AVNHKLLIAPRGQPSD---WSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLT--------------------RIWTMMA 398 (751)
T ss_dssp CTTCEEEEEETTSTTC---CCCEEECCCSSEEEEEEEECSSEEEEEEEETTEE--------------------EEEEEEC
T ss_pred CCCcEEEEEcCCCccc---ceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEE--------------------EEEEEec
Confidence 277777764321 122 344444433333444567777665432211 2222221
Q ss_pred -------CCCC-CCCcccccCCCCCCceeeeE------ecCCCEEEEEecCCCCCcccceeecCCCcceeeec
Q 004785 288 -------HSSS-HPGLAEEVPLITPPFLRPSF------VRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLT 346 (730)
Q Consensus 288 -------~s~d-~~~L~~~~~~~slpil~p~F------SpDg~rI~~~~~~~dsgs~~~~~~~~ss~~~~l~~ 346 (730)
..+. ...+. . +.......+ +.|++.+++...+...+...+..++.+...+.|..
T Consensus 399 ~~~~~~~~~g~~~~~l~-l----~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 399 DSQDGVFKAGTGLREVV-M----EEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKV 466 (751)
T ss_dssp CTTTSCCCTTTCCEECC-C----CCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEE
T ss_pred ccccccccCCccceEEC-C----CCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 1111 00000 0 000111233 56888899988888888899988887766666653
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.97 E-value=0.00059 Score=71.13 Aligned_cols=170 Identities=8% Similarity=0.074 Sum_probs=106.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCCC-----------------------CCCCeEEEEECC-CCCEEEEEeCCCeEEEEEC
Q 004785 81 RRGLASWVEAESLHHLRPKYCPLSP-----------------------PPRSTIAAAFSP-DGKTLASTHGDHTVKIIDC 136 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~L~g-----------------------H~~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl 136 (730)
+..+++...++.|..|+...+.+.. ....+..+++++ +|+ |+.+...+.|.++|.
T Consensus 30 g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~ 108 (322)
T 2fp8_A 30 NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYHLSVVGS 108 (322)
T ss_dssp CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTEEEEECT
T ss_pred CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCCEEEEeC
Confidence 4446677777888888776543210 013578999998 554 555555556888887
Q ss_pred CCCeEEEEEec-----CCCCcEEEEEccCCCCEEEEEeC-----------------CCcEEEEECCCCeEEEEecCCCCe
Q 004785 137 QTGSCLKVLHG-----HRRTPWVVRFHPLNPTIIASGSL-----------------DHEVRLWNASTAECIGSRDFYRPI 194 (730)
Q Consensus 137 ~tg~~l~~l~g-----H~~~V~sVafSP~dg~lLaSgS~-----------------DgtVrLWDl~tg~~i~~l~h~~~V 194 (730)
.+++. ..+.. .......+++.+.+++++++-.. ++.|..||..+++...........
T Consensus 109 ~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p 187 (322)
T 2fp8_A 109 EGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP 187 (322)
T ss_dssp TCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC
T ss_pred CCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC
Confidence 76542 23321 11346789998734566665432 367999998877654433322345
Q ss_pred EEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 195 ASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 195 ~sVafSPdG~~LAsgS--dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
+.++|+|+|++|+++. .++|++||+..... .....+..... ...++++++|+.+++..
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-GTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-TCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcC-CccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 6799999999887775 35699999875321 11111212223 78899999998666554
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.97 E-value=0.00024 Score=83.38 Aligned_cols=161 Identities=12% Similarity=0.135 Sum_probs=107.0
Q ss_pred eEEEEeCCCCCC------CCCC-------CCeEEEEECCCCC---EEEEEeCCCeEEEEECCCCeEEEEEecCC------
Q 004785 92 SLHHLRPKYCPL------SPPP-------RSTIAAAFSPDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHR------ 149 (730)
Q Consensus 92 sIrlWd~~t~~L------~gH~-------~~Vt~lafSPDG~---~LaSgS~DgtVrVWDl~tg~~l~~l~gH~------ 149 (730)
.|..||.+++++ ..|. ..+.......+|+ .|+.++.+|.++++|.++|+.+...+...
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 388999988742 2232 1222223333665 78899999999999999999874432111
Q ss_pred --------------------------------C-CcEEEEEccCCCCEEEEEeC--------------------------
Q 004785 150 --------------------------------R-TPWVVRFHPLNPTIIASGSL-------------------------- 170 (730)
Q Consensus 150 --------------------------------~-~V~sVafSP~dg~lLaSgS~-------------------------- 170 (730)
+ .-..++|+| +..+++....
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEEEEeccccceeeeeccccccccccccccccCc
Confidence 0 011378888 6566665421
Q ss_pred -------------------CCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeE
Q 004785 171 -------------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRI 230 (730)
Q Consensus 171 -------------------DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~ 230 (730)
+++|+.||+.+|+.+..+.+...+....+...|.+|++++ ++.|+.||.++++.+. ..
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw--~~ 512 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLW--EQ 512 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE--EE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccce--ee
Confidence 3789999999999998877665555556777888888888 4559999999998754 12
Q ss_pred EecCCCCeEEEEEccCCCeEEEEEe
Q 004785 231 VLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 231 l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
...+.....-+.|..+|+.+++...
T Consensus 513 ~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 513 PAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp ECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eCCCCcccCceEEEECCEEEEEEEe
Confidence 2233222344677889987766554
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.96 E-value=0.00073 Score=68.36 Aligned_cols=143 Identities=12% Similarity=0.025 Sum_probs=95.8
Q ss_pred CeEEEEECCCCCEEEEEe-CCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 004785 109 STIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS 187 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~ 187 (730)
.+..++|+++++.|+.+. .++.|.++|...+.....+.........++++++++.++++-...+.|.++|+........
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 467999999766665554 4789999998766544444333356889999984566666666778999999875433222
Q ss_pred ecC-CCCeEEEEEcCCCCEEEEEEC----CeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 188 RDF-YRPIASIAFHASGELLAVASG----HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 188 l~h-~~~V~sVafSPdG~~LAsgSd----d~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
... ......++++|++..|+.+.. +.|..++++.... . ......-.....++|++++.+|..+.
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~--~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-R--ILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-E--EEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-E--EEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 322 246789999998777766653 3488888764322 1 11112334678999999988776654
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.90 E-value=0.0004 Score=72.19 Aligned_cols=191 Identities=10% Similarity=0.110 Sum_probs=116.7
Q ss_pred eEEEEECCCCCEEEEEeCCC--eEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q 004785 110 TIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS 187 (730)
Q Consensus 110 Vt~lafSPDG~~LaSgS~Dg--tVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~ 187 (730)
...+.|+ ++.++.+++.++ .|+++|+++++.+..+.-.. ........+.++.+++..-.++.+.++|..+.+.+..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 5789998 777777777766 89999999999998886543 3444334443456666666799999999999999998
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCC---CCeEEEEEccCCCeEEEEEeeCCccCCC
Q 004785 188 RDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAAPLLLTAEVNDLDSSE 263 (730)
Q Consensus 188 l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~---~~V~sVaFSPdG~~Llatgsvwdl~s~~ 263 (730)
+.....- ..+++||+.|+.+. +++|+++|..+.+....... .... ..++.+.|. +|+ +.+ ++|.- +
T Consensus 123 i~~~~eG--~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V-~~~g~~~~~lNELe~~-~G~-lya--n~w~~---~ 192 (262)
T 3nol_A 123 FNYDGEG--WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV-TAHGEELPELNELEWV-DGE-IFA--NVWQT---N 192 (262)
T ss_dssp EECSSCC--CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC-EETTEECCCEEEEEEE-TTE-EEE--EETTS---S
T ss_pred EECCCCc--eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe-ccCCccccccceeEEE-CCE-EEE--EEccC---C
Confidence 8765432 34446788777765 45599999998876542111 1111 345567776 675 443 23431 2
Q ss_pred cceeEeccCCcccCCCCeEEEecCCCCCCCCccccc--CCCCCCce-eeeEecCCCEEEEEec
Q 004785 264 SSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEV--PLITPPFL-RPSFVRDDERISLQHT 323 (730)
Q Consensus 264 ~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~--~~~slpil-~p~FSpDg~rI~~~~~ 323 (730)
....+...+|. ++...+... +.... .......+ -.+|+|+++++.+...
T Consensus 193 ~I~vIDp~tG~------V~~~Id~~~-----L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 193 KIVRIDPETGK------VTGIIDLNG-----ILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEECTTTCB------EEEEEECTT-----GGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred eEEEEECCCCc------EEEEEECCc-----CccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 23333333333 222222110 00000 00112344 6899999999998443
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.87 E-value=0.00042 Score=72.23 Aligned_cols=189 Identities=10% Similarity=0.056 Sum_probs=116.3
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR 188 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l 188 (730)
....+.|+ ++.++.+.+.++.|+++|+++++.+..+ -. .........+.++.+++..-.++.+.++|..+.+.+..+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 35788997 4666777788889999999999988777 22 334443333435677777778999999999999999988
Q ss_pred cCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCC---CCeEEEEEccCCCeEEEEEeeCCccCCCc
Q 004785 189 DFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAAPLLLTAEVNDLDSSES 264 (730)
Q Consensus 189 ~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~---~~V~sVaFSPdG~~Llatgsvwdl~s~~~ 264 (730)
.....-..++ +||+.|+.+. ++.|+++|..+.+...... ...+. ..++.+.|. +|+ +.+ ++|.- +.
T Consensus 133 ~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~-V~~~g~~v~~lNeLe~~-dG~-lya--nvw~s---~~ 202 (268)
T 3nok_A 133 RYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQ-VKLRGQPVELINELECA-NGV-IYA--NIWHS---SD 202 (268)
T ss_dssp ECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEE-CEETTEECCCEEEEEEE-TTE-EEE--EETTC---SE
T ss_pred eCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEE-eCCCCcccccccccEEe-CCE-EEE--EECCC---Ce
Confidence 7654434444 5788888776 4559999999887654211 11122 245677777 675 443 33432 23
Q ss_pred ceeEeccCCcccCCCCeEEEecCCCCCCCCccc-cc--CCCCCCce-eeeEecCCCEEEEE
Q 004785 265 SLTLATSPGYWRYPPPVICMAGAHSSSHPGLAE-EV--PLITPPFL-RPSFVRDDERISLQ 321 (730)
Q Consensus 265 ~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~-~~--~~~slpil-~p~FSpDg~rI~~~ 321 (730)
...+...+|. ++...+... +.. .. .......+ -.+|+++++++.+.
T Consensus 203 I~vIDp~TG~------V~~~Idl~~-----L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 203 VLEIDPATGT------VVGVIDASA-----LTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp EEEECTTTCB------EEEEEECHH-----HHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred EEEEeCCCCc------EEEEEECCC-----CcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 3333333333 222222110 000 00 01112344 58999999999883
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.86 E-value=0.0011 Score=69.08 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=92.5
Q ss_pred CeEEEEECCCCCEEEEEeC--CCeEEEEECCCCeEEEEEecCCC-CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE
Q 004785 109 STIAAAFSPDGKTLASTHG--DHTVKIIDCQTGSCLKVLHGHRR-TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI 185 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~--DgtVrVWDl~tg~~l~~l~gH~~-~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i 185 (730)
....+.|++|+.++++.+. +..|.++|+.+++.+..+.-... ....+++. ++.++++.-.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 3689999998754444443 57999999999999888753222 22345554 4566666777899999999999998
Q ss_pred EEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEec--CCCCeEEEEEccCCCeEEE
Q 004785 186 GSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLR--TRRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 186 ~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~--h~~~V~sVaFSPdG~~Lla 252 (730)
..+... .-....+++||+.|+++. ++.|+++|..+.+.......-.. .-..++.+.|. +|+ +.+
T Consensus 100 ~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyv 166 (266)
T 2iwa_A 100 KNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE-VWA 166 (266)
T ss_dssp EEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEE
T ss_pred EEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE-EEE
Confidence 887654 112344667888777665 34599999988775441111110 11246788888 664 443
No 240
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.73 E-value=0.00095 Score=78.84 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=90.3
Q ss_pred CCCC-CeEEEEEC-CCCCEEEEEeC-C----CeEEEEECCCC-eEEE-EEecCCCCcEEEEEccCCCCEEEEEeCC----
Q 004785 105 PPPR-STIAAAFS-PDGKTLASTHG-D----HTVKIIDCQTG-SCLK-VLHGHRRTPWVVRFHPLNPTIIASGSLD---- 171 (730)
Q Consensus 105 gH~~-~Vt~lafS-PDG~~LaSgS~-D----gtVrVWDl~tg-~~l~-~l~gH~~~V~sVafSP~dg~lLaSgS~D---- 171 (730)
+|.- .+....|| |||++||.+.. + .+|+++|+.++ +.+. .+.. ....++|+| +++.|+....|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~Wsp-Dg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGP-DHTSLFYVTKDETLR 245 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECS-STTEEEEEEECTTCC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEec-CCCEEEEEEECCCCC
Confidence 3443 67899999 99999887644 2 35999999998 6321 1211 134689999 66666555554
Q ss_pred -CcEEEEECCCCeE--EEEe--cCCCCeEEEEEcCCCCEEEEEE-C--C-eEEEEEcCCCccccCC--eEEec-CCCCeE
Q 004785 172 -HEVRLWNASTAEC--IGSR--DFYRPIASIAFHASGELLAVAS-G--H-KLYIWRYNMREETSSP--RIVLR-TRRSLR 239 (730)
Q Consensus 172 -gtVrLWDl~tg~~--i~~l--~h~~~V~sVafSPdG~~LAsgS-d--d-~I~VWDl~t~~~~~~~--~~l~~-h~~~V~ 239 (730)
..|+++++.+++. ...+ ........+.|+|||++|+..+ . . .|+++|+.++.. .. ..+.. ......
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~--~~~~~~l~~~~~~~~~ 323 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA--HNTLEIVRPREKGVRY 323 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT--CCCEEESSCCCTTCCE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC--CceeEEeecCCCCceE
Confidence 3688899987642 2222 2334567889999999888766 2 2 299999987531 11 12222 334455
Q ss_pred EEEEccCCCeEEEEEe
Q 004785 240 AVHFHPHAAPLLLTAE 255 (730)
Q Consensus 240 sVaFSPdG~~Llatgs 255 (730)
++.|+. |+.|+..++
T Consensus 324 s~~~~~-g~~l~~~t~ 338 (751)
T 2xe4_A 324 DVQMHG-TSHLVILTN 338 (751)
T ss_dssp EEEEET-TTEEEEEEC
T ss_pred EEeeee-CCEEEEEeC
Confidence 555543 555665543
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.72 E-value=1.7e-05 Score=85.48 Aligned_cols=126 Identities=16% Similarity=0.103 Sum_probs=65.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC--CeE
Q 004785 118 DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR--PIA 195 (730)
Q Consensus 118 DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~--~V~ 195 (730)
++.++++++.|+.|+.||..+|+.+..++. +.+.+..+.. ++.++++++.|+.|+.||..+|+.+....... .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 678999999999999999999999988876 5566555666 66778888899999999999998766654221 110
Q ss_pred -EEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 196 -SIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 196 -sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
+..+. ++..|++++ ++.|+.||..+++... ....+. ...++|++..+++++
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w---~~~~~~----~~~~~p~~~~v~~~~ 137 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ---TLSSAF----ADSLSPSTSLLYLGR 137 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC-----------------------------EEEEE
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE---EecCCC----cccccccCCEEEEEe
Confidence 11111 344566665 5569999999987643 111121 234567777666654
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.66 E-value=0.0043 Score=63.78 Aligned_cols=196 Identities=14% Similarity=0.085 Sum_probs=116.8
Q ss_pred CCeEEEEECCCCCEEEEEeCC--CeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE
Q 004785 108 RSTIAAAFSPDGKTLASTHGD--HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI 185 (730)
Q Consensus 108 ~~Vt~lafSPDG~~LaSgS~D--gtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i 185 (730)
..+..+.|+. +.++.+.+.+ ..|+++|+++|+.+..+.-... .........++++++..-.++.+.++|..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3477999985 5566666665 4899999999999988864433 3333333335666777778999999999999999
Q ss_pred EEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCC---CCeEEEEEccCCCeEEEEEeeCCccC
Q 004785 186 GSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAAPLLLTAEVNDLDS 261 (730)
Q Consensus 186 ~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~---~~V~sVaFSPdG~~Llatgsvwdl~s 261 (730)
..+.....-..++ +|++.|+++. +++|+++|..+.+...... ...+. ..++.+.|. +|+ +. .++|.-
T Consensus 99 ~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~-V~~~g~~~~~lNeLe~~-~G~-ly--anvw~s-- 169 (243)
T 3mbr_X 99 ARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIK-VTAGGRPLDNLNELEWV-NGE-LL--ANVWLT-- 169 (243)
T ss_dssp EEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEE-CEETTEECCCEEEEEEE-TTE-EE--EEETTT--
T ss_pred EEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEE-EccCCcccccceeeEEe-CCE-EE--EEECCC--
Confidence 9987655434444 5677777665 4459999999887654211 11121 345566665 565 44 334432
Q ss_pred CCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCce-eeeEecCCCEEEEEec
Q 004785 262 SESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFL-RPSFVRDDERISLQHT 323 (730)
Q Consensus 262 ~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil-~p~FSpDg~rI~~~~~ 323 (730)
+....+...+|. ++...+...-.. ..... .......+ -.+|+++++++.+...
T Consensus 170 -~~I~vIDp~tG~------V~~~idl~~l~~-~~~~~-~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 170 -SRIARIDPASGK------VVAWIDLQALVP-DADAL-TDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp -TEEEEECTTTCB------EEEEEECGGGST-TTTSC-CCTTSSCEEEEEEETTTTEEEEEET
T ss_pred -CeEEEEECCCCC------EEEEEECCcCcc-ccccc-cCCcCCceEEEEEcCCCCEEEEECC
Confidence 233344444444 233222110000 00000 00112344 5899999999998433
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.65 E-value=0.00068 Score=79.29 Aligned_cols=78 Identities=10% Similarity=0.130 Sum_probs=59.1
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------eEEEEECCCCeEEEEEec--CC-------CCcEEEEEccCCC
Q 004785 111 IAAAFSPDGKTLASTHGDH-------------------TVKIIDCQTGSCLKVLHG--HR-------RTPWVVRFHPLNP 162 (730)
Q Consensus 111 t~lafSPDG~~LaSgS~Dg-------------------tVrVWDl~tg~~l~~l~g--H~-------~~V~sVafSP~dg 162 (730)
..+++++++.+|+.+..++ .|..+|.++|+.+..++. |. .....+.... ++
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG 324 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AG 324 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TT
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CC
Confidence 3578899999998887664 599999999999888764 21 1223334444 55
Q ss_pred ---CEEEEEeCCCcEEEEECCCCeEEEEec
Q 004785 163 ---TIIASGSLDHEVRLWNASTAECIGSRD 189 (730)
Q Consensus 163 ---~lLaSgS~DgtVrLWDl~tg~~i~~l~ 189 (730)
..++.++.+|.|+++|..+|+.+..+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 688999999999999999999887654
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.64 E-value=0.00063 Score=69.84 Aligned_cols=159 Identities=12% Similarity=0.012 Sum_probs=106.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~----L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVa 156 (730)
+..|+.+..++.|..+|.. +. +..+...+.++...++|. |..++.++.|..+|.. ++.+..+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 5678888888999999987 42 223344456667777776 5567788999999998 888777776666677788
Q ss_pred EccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEEecCC
Q 004785 157 FHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTR 235 (730)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~~l~~h~ 235 (730)
+.+ ++.+++.. +.|..+| .+++.+.... ....+.++..+++|.+.+...++.|..+|. +++... ......
T Consensus 184 ~d~-~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~---~~~~~~ 254 (330)
T 3hxj_A 184 IGK-DGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKW---RFKTGK 254 (330)
T ss_dssp ECT-TCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEE---EEECSS
T ss_pred EcC-CCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeE---EeeCCC
Confidence 876 66655544 7899999 7777666654 335678888998887665544677888874 333221 222223
Q ss_pred CCeEEEEEccCCCeEE
Q 004785 236 RSLRAVHFHPHAAPLL 251 (730)
Q Consensus 236 ~~V~sVaFSPdG~~Ll 251 (730)
..+..+.+.++|...+
T Consensus 255 ~~~~~~~~~~~g~l~v 270 (330)
T 3hxj_A 255 RIESSPVIGNTDTIYF 270 (330)
T ss_dssp CCCSCCEECTTSCEEE
T ss_pred CccccceEcCCCeEEE
Confidence 3344556666776443
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.57 E-value=0.0097 Score=59.98 Aligned_cols=162 Identities=9% Similarity=0.020 Sum_probs=102.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC---C-CCCCCCeEEEEECCCCCEEEEEeC---CCeEEEEECCCCeEEEEE-ecCCCCc
Q 004785 81 RRGLASWVEAESLHHLRPKYCP---L-SPPPRSTIAAAFSPDGKTLASTHG---DHTVKIIDCQTGSCLKVL-HGHRRTP 152 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~---L-~gH~~~Vt~lafSPDG~~LaSgS~---DgtVrVWDl~tg~~l~~l-~gH~~~V 152 (730)
+...++-...+.|.+++.+... + .........++++|++..|+.+.. .+.|.++++.. +....+ .......
T Consensus 91 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P 169 (267)
T 1npe_A 91 RTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLP 169 (267)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCE
T ss_pred CeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCC
Confidence 3444444556788888876431 1 112245789999997666665554 36888888754 333333 2333467
Q ss_pred EEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeE
Q 004785 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRI 230 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~~~~~~~~~ 230 (730)
..++++++++.++++-...+.|.++|+.................++.. +..|+++. ++.|.++|..+++... .
T Consensus 170 ~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~---~ 244 (267)
T 1npe_A 170 NGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMD---T 244 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEE---E
T ss_pred cEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceE---E
Confidence 899999944556666667789999999765444333333445566654 56676666 3559999998877543 2
Q ss_pred EecC-CCCeEEEEEccCCC
Q 004785 231 VLRT-RRSLRAVHFHPHAA 248 (730)
Q Consensus 231 l~~h-~~~V~sVaFSPdG~ 248 (730)
+... ......+++.|++.
T Consensus 245 i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 245 FHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ECCSSCCCCCCEEEECSCC
T ss_pred EccccccccceeeecCccC
Confidence 2222 22467888888875
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.54 E-value=0.00021 Score=82.21 Aligned_cols=163 Identities=11% Similarity=0.104 Sum_probs=105.0
Q ss_pred CCeEEEEeCCCCCCCCC---CCCeEEEEECCCCCEEEEEeCCC-------------------------------------
Q 004785 90 AESLHHLRPKYCPLSPP---PRSTIAAAFSPDGKTLASTHGDH------------------------------------- 129 (730)
Q Consensus 90 DgsIrlWd~~t~~L~gH---~~~Vt~lafSPDG~~LaSgS~Dg------------------------------------- 129 (730)
++.+.++|.++.++... .+.-..++++|||+++++++.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 44688888877521100 11335678999999999988543
Q ss_pred -eEEEEECCC--CeE-EEEEecCCCCcEEEEEccCCCCEE-EEEeCCCcEEEEECCCCe------------EEEEecCCC
Q 004785 130 -TVKIIDCQT--GSC-LKVLHGHRRTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAE------------CIGSRDFYR 192 (730)
Q Consensus 130 -tVrVWDl~t--g~~-l~~l~gH~~~V~sVafSP~dg~lL-aSgS~DgtVrLWDl~tg~------------~i~~l~h~~ 192 (730)
.|.|.|.++ ++. +..+..- ....++.++| |++++ +++..+.+|.++|+.+.+ .........
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred CcEEEEeCcccCCceeEEEEecC-CCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 377777777 544 4455432 3467799999 66655 555578899999999653 344455566
Q ss_pred CeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCc------c-ccCCeEEecCCCC-----eEEEEEccCCCeEEEEEe
Q 004785 193 PIASIAFHASGELLAVAS--GHKLYIWRYNMRE------E-TSSPRIVLRTRRS-----LRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 193 ~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~~------~-~~~~~~l~~h~~~-----V~sVaFSPdG~~Llatgs 255 (730)
....++|+|+| ++++.. ++.|.+||+.... . ......+.-|-.+ -..+.++|||++|+++..
T Consensus 332 gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 332 GPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 78999999999 777776 6679999997721 1 1111122223221 122346899998877764
No 247
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.51 E-value=0.007 Score=65.56 Aligned_cols=165 Identities=9% Similarity=-0.028 Sum_probs=110.2
Q ss_pred EeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCC
Q 004785 87 WVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNP 162 (730)
Q Consensus 87 gs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~La-SgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg 162 (730)
.+....|+.+++.... +......+..++|++.+..|+ +-...+.|+.++...+.....+.........+++.+.++
T Consensus 92 ~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 92 FANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 171 (386)
T ss_dssp EECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred eecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence 4455678888876542 223345688999998655555 445578999999887664444443344567899988567
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEecCCCCe
Q 004785 163 TIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRSL 238 (730)
Q Consensus 163 ~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~h~~~V 238 (730)
+++++-...+.|.+.++........+. .-.....++++|.+..|+.... +.|+.+++...... ......-...
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~~~~P 248 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR---IIADTHLFWP 248 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCE
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE---EEEECCCCCe
Confidence 777777778889999987554333333 3356789999998887777763 34888887654321 1222334467
Q ss_pred EEEEEccCCCeEEEEE
Q 004785 239 RAVHFHPHAAPLLLTA 254 (730)
Q Consensus 239 ~sVaFSPdG~~Llatg 254 (730)
..|+|+|++..|..+-
T Consensus 249 nGlavd~~~~~lY~aD 264 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVD 264 (386)
T ss_dssp EEEEEEGGGTEEEEEE
T ss_pred eeEEEeCCCCEEEEEE
Confidence 8999999887776664
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.50 E-value=0.018 Score=60.43 Aligned_cols=162 Identities=10% Similarity=-0.005 Sum_probs=103.2
Q ss_pred CCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCC----CeEEEEEecCCCCcEEEEEccCC
Q 004785 90 AESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQT----GSCLKVLHGHRRTPWVVRFHPLN 161 (730)
Q Consensus 90 DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~t----g~~l~~l~gH~~~V~sVafSP~d 161 (730)
...|+..|+.... +......+.+++|+++++.|+.+ ..++.|+.+++.. ......+.........+++.+.+
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 4456777766542 22334567899999866555554 4568999999876 22222333333456889998746
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEecCCCC
Q 004785 162 PTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRS 237 (730)
Q Consensus 162 g~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~h~~~ 237 (730)
++++++-...+.|.+.|+........+. .......++++|.+..|+.+.. ++|..+++....... .....-..
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~---~~~~~~~~ 165 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQW 165 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE---EECSSCSC
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE---EEECCCCC
Confidence 6777777778899999987554433333 3456789999997776666652 458888875433211 12223456
Q ss_pred eEEEEEccCCCeEEEEE
Q 004785 238 LRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 238 V~sVaFSPdG~~Llatg 254 (730)
...++|++++..|..+.
T Consensus 166 P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVD 182 (316)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ceEEEEeccCCEEEEEE
Confidence 78999999888776654
No 249
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.47 E-value=0.014 Score=60.50 Aligned_cols=168 Identities=12% Similarity=0.106 Sum_probs=97.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC--CCCCCCCeEEEEECCCCCEEEEEeC-C-CeEEEEECCCCeEEEEEec-CCCCcEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYCP--LSPPPRSTIAAAFSPDGKTLASTHG-D-HTVKIIDCQTGSCLKVLHG-HRRTPWVV 155 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~--L~gH~~~Vt~lafSPDG~~LaSgS~-D-gtVrVWDl~tg~~l~~l~g-H~~~V~sV 155 (730)
+..+++-..++.|..||..... +..-...+..++++++|+++++... + ..|..+|..+++....... .......+
T Consensus 43 g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~ 122 (306)
T 2p4o_A 43 GTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGI 122 (306)
T ss_dssp SCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEE
T ss_pred CCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcc
Confidence 3334444456677777765431 1112345889999999996655543 2 2577778888875433321 22233455
Q ss_pred EEccCCCCEEEEEeCCCcEEEEECCCCeE-EEEe----------cCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCC
Q 004785 156 RFHPLNPTIIASGSLDHEVRLWNASTAEC-IGSR----------DFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMR 222 (730)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~tg~~-i~~l----------~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~ 222 (730)
+..+ ++..+++-..++.|+++|..+++. +... ..-...+.+ +|++++|+++. .+.|++||+...
T Consensus 123 ~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~ 199 (306)
T 2p4o_A 123 TPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDST 199 (306)
T ss_dssp EESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTT
T ss_pred cccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCC
Confidence 6555 555566555688999999876532 2110 011234555 88999888887 345999998752
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEE
Q 004785 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPdG~~Lla 252 (730)
........+.. ......++++++|+.+++
T Consensus 200 g~~~~~~~~~~-~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 200 DKPGEPEIFVE-QTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp SCBCCCEEEEE-SCCCSSEEEBTTCCEEEE
T ss_pred CCCCccEEEec-cCCCCCeEECCCCCEEEE
Confidence 21111112211 234567899999975443
No 250
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.42 E-value=0.014 Score=62.31 Aligned_cols=163 Identities=9% Similarity=-0.043 Sum_probs=107.0
Q ss_pred CCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCE
Q 004785 89 EAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTI 164 (730)
Q Consensus 89 ~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~l 164 (730)
....|+..++.... +......+..++|++....|+.. ...+.|+.++...+.....+.........+++.+.++++
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence 44556666665432 22233457899999865555544 457899999988765444444334556789999856777
Q ss_pred EEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEecCCCCeEE
Q 004785 165 IASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRSLRA 240 (730)
Q Consensus 165 LaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~h~~~V~s 240 (730)
+++-...+.|.+.++........+. .-.....++++|.+..|+.... ++|+.++++...... .....-.....
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~PnG 207 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWPNG 207 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---SCCSSCSCEEE
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCcce
Confidence 7777778899999987554333332 3356789999998777776663 448888876543211 11123346789
Q ss_pred EEEccCCCeEEEEE
Q 004785 241 VHFHPHAAPLLLTA 254 (730)
Q Consensus 241 VaFSPdG~~Llatg 254 (730)
|+|+|++..|..+-
T Consensus 208 la~d~~~~~lY~aD 221 (349)
T 3v64_C 208 LTIDYAGRRMYWVD 221 (349)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEeCCCCEEEEEE
Confidence 99999888776663
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.41 E-value=0.0017 Score=66.61 Aligned_cols=161 Identities=14% Similarity=-0.004 Sum_probs=104.8
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEE
Q 004785 79 DARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (730)
Q Consensus 79 d~g~~L~Sgs~DgsIrlWd~~t~~----L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~s 154 (730)
+.+..|+.+..++.|..+|.. +. +......+.++.+.++|.+++ ++ +.|..+| .+++.+..+......+.+
T Consensus 145 ~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~ 219 (330)
T 3hxj_A 145 SEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTR 219 (330)
T ss_dssp CTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSC
T ss_pred cCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceec
Confidence 335568888888999999987 52 222344567777877777554 44 7899999 788877777766667888
Q ss_pred EEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-CCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEEec
Q 004785 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h-~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~~l~~ 233 (730)
+...+ ++. +..++.++.|..+|. +++.+..+.. ...+.++.+.++|++.+...++.|..+|. +++... ....
T Consensus 220 ~~~~~-~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~---~~~~ 292 (330)
T 3hxj_A 220 PAISE-DGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKW---NFET 292 (330)
T ss_dssp CEECT-TSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEE---EEEC
T ss_pred eEECC-CCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEE---EEEc
Confidence 88877 555 444667788888885 5655555443 23344566676776544333557999985 444322 2222
Q ss_pred CCCCeEEEEEccCCCeEE
Q 004785 234 TRRSLRAVHFHPHAAPLL 251 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Ll 251 (730)
....+.++...++|+.++
T Consensus 293 ~~~~~~~~~~d~~g~l~~ 310 (330)
T 3hxj_A 293 GSWIIATPVIDENGTIYF 310 (330)
T ss_dssp SSCCCSCCEECTTCCEEE
T ss_pred CCccccceEEcCCCEEEE
Confidence 345566777778887444
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.39 E-value=0.0035 Score=73.15 Aligned_cols=160 Identities=13% Similarity=0.157 Sum_probs=100.8
Q ss_pred eEEEEeCCCCCC------CCCC-------CCeEEEEECCCCC---EEEEEeCCCeEEEEECCCCeEEEEEecCCCC----
Q 004785 92 SLHHLRPKYCPL------SPPP-------RSTIAAAFSPDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHRRT---- 151 (730)
Q Consensus 92 sIrlWd~~t~~L------~gH~-------~~Vt~lafSPDG~---~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~---- 151 (730)
.|..+|.+++++ ..|. .......+..+|+ .|+.++.+|.++++|..+|+.+..++.....
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 388888888742 2232 2233333334675 6888999999999999999988544322100
Q ss_pred --------------------------------cEEEEEccCCCCEEEEE-------------------------------
Q 004785 152 --------------------------------PWVVRFHPLNPTIIASG------------------------------- 168 (730)
Q Consensus 152 --------------------------------V~sVafSP~dg~lLaSg------------------------------- 168 (730)
-..++++| +..+++..
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 429 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP-GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADAT 429 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECC-CCCEEEEeccccceEeeeeccccccccccccCccccccC
Confidence 01267788 44444331
Q ss_pred -----eCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCC-CCeEEE
Q 004785 169 -----SLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR-RSLRAV 241 (730)
Q Consensus 169 -----S~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~-~~V~sV 241 (730)
..++.|..||+.+|+.+.............+...|.+|++++ ++.|++||.++++.+. .+.... -.-.-+
T Consensus 430 ~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~---~~~~~~~~~~~p~ 506 (668)
T 1kv9_A 430 DVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALW---QFEAQSGIVAAPM 506 (668)
T ss_dssp CCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE---EEECSSCCCSCCE
T ss_pred CCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhhe---EecCCCCcccCce
Confidence 124789999999999988876555555555666788888887 4559999999998654 121111 111234
Q ss_pred EEccCCCeEEEEEe
Q 004785 242 HFHPHAAPLLLTAE 255 (730)
Q Consensus 242 aFSPdG~~Llatgs 255 (730)
.+..+|+.+++.+.
T Consensus 507 ~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 507 TFELAGRQYVAIMA 520 (668)
T ss_dssp EEEETTEEEEEEEE
T ss_pred EEEECCEEEEEEEe
Confidence 45568886665554
No 253
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.35 E-value=0.0019 Score=75.60 Aligned_cols=81 Identities=14% Similarity=0.045 Sum_probs=61.5
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC--CeEEEEEcCCCC-
Q 004785 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR--PIASIAFHASGE- 204 (730)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~--~V~sVafSPdG~- 204 (730)
++.|+.||+.+|+.+..++.+.. +....+.. .+.+++.++.|+.|+.||.++|+.+..+.... ...-+.|..+|+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTI-FNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS-CCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ceeEEEEECCCCCeEeEccCCCC-ccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEE
Confidence 37899999999999988876543 34345666 67889999999999999999999998876433 234577788888
Q ss_pred EEEEEE
Q 004785 205 LLAVAS 210 (730)
Q Consensus 205 ~LAsgS 210 (730)
++++.+
T Consensus 532 yv~~~~ 537 (689)
T 1yiq_A 532 YVTFMA 537 (689)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 455444
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.33 E-value=0.023 Score=66.87 Aligned_cols=174 Identities=7% Similarity=-0.012 Sum_probs=119.8
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCCCC------------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYCPLS------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL 142 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~~L~------------gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l 142 (730)
....+....|+.|..++-|..|+..++++. -....|.++...++|++|..|+.++-|.+||..+++..
T Consensus 361 ~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~ 440 (795)
T 4a2l_A 361 CIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE 440 (795)
T ss_dssp EEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE
Confidence 334566778999999888999998765321 12356999999988885677788778999999887643
Q ss_pred EEEe-----cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-------CCCCeEEEEEcCCCCEEEEEE
Q 004785 143 KVLH-----GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-------FYRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 143 ~~l~-----gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-------h~~~V~sVafSPdG~~LAsgS 210 (730)
.+. .....|.++...+ ++.+.+... +-|.+||..+++...... ....|.++..+++|++.+...
T Consensus 441 -~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 441 -NFNQRNSQLVNENVYAILPDG-EGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp -EECTTTSCCSCSCEEEEEECS-SSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred -EeecCCCCcCCCeeEEEEECC-CCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC
Confidence 332 1345688888887 666665543 459999998876544321 135789999999998665544
Q ss_pred CCeEEEEEcCCCccccCC---eEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 211 GHKLYIWRYNMREETSSP---RIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 211 dd~I~VWDl~t~~~~~~~---~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
++|.+||..+... ... .........|.++..+++|...+.+.
T Consensus 517 -~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 517 -EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp -SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred -CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence 7799999876543 100 00011345789999999999666654
No 255
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.29 E-value=0.027 Score=61.31 Aligned_cols=166 Identities=10% Similarity=-0.001 Sum_probs=111.0
Q ss_pred EEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCC----eEEEEEecCCCCcEEEEE
Q 004785 86 SWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTG----SCLKVLHGHRRTPWVVRF 157 (730)
Q Consensus 86 Sgs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg----~~l~~l~gH~~~V~sVaf 157 (730)
..+....|+..++.... +......+..++|++.+..|+.+ ...+.|+.+++... .....+.........+++
T Consensus 87 l~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 166 (400)
T 3p5b_L 87 FFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 166 (400)
T ss_dssp EEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEE
T ss_pred EEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEE
Confidence 34445778888876542 33445678999999866655555 45688999998652 233344434556788999
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEec
Q 004785 158 HPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 158 SP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~ 233 (730)
.+.+++++++-...+.|.+.|+........+. .......++++|.+.+|+.... +.|+..+++...... ....
T Consensus 167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~---~~~~ 243 (400)
T 3p5b_L 167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTE 243 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE---EECS
T ss_pred EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE---EEEC
Confidence 87567777777778899999998665444443 3456789999998777777662 348888886543211 2223
Q ss_pred CCCCeEEEEEccCCCeEEEEE
Q 004785 234 TRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Llatg 254 (730)
.-.....|+|++++..|..+-
T Consensus 244 ~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEE
Confidence 335778999999888777663
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.21 E-value=0.0068 Score=63.01 Aligned_cols=140 Identities=8% Similarity=0.065 Sum_probs=90.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC--------------------CCCcEEEEEccCCCCEEEEE
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH--------------------RRTPWVVRFHPLNPTIIASG 168 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH--------------------~~~V~sVafSP~dg~lLaSg 168 (730)
...+++|+++|++++++..++.|..||..+++. ..+... ...+..+++.+++++ |+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 345788999999888888899999999876653 333210 135788999873444 4445
Q ss_pred eCCCcEEEEECCCCeEEEEec-----CCCCeEEEEEcC-CCCEEEEEEC------------------CeEEEEEcCCCcc
Q 004785 169 SLDHEVRLWNASTAECIGSRD-----FYRPIASIAFHA-SGELLAVASG------------------HKLYIWRYNMREE 224 (730)
Q Consensus 169 S~DgtVrLWDl~tg~~i~~l~-----h~~~V~sVafSP-dG~~LAsgSd------------------d~I~VWDl~t~~~ 224 (730)
...+.|..+|..+++...... .....+.+++++ +|++.++-.. +.|+.||..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 445568899987654322211 113578899999 9986665432 3488888766543
Q ss_pred ccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
.. ..........++|+++|+++.++.
T Consensus 178 ~~----~~~~~~~p~gia~~~dg~~lyv~d 203 (322)
T 2fp8_A 178 TL----LLKELHVPGGAEVSADSSFVLVAE 203 (322)
T ss_dssp EE----EEEEESCCCEEEECTTSSEEEEEE
T ss_pred EE----eccCCccCcceEECCCCCEEEEEe
Confidence 21 122223456799999998666553
No 257
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.17 E-value=0.00081 Score=73.17 Aligned_cols=89 Identities=13% Similarity=-0.081 Sum_probs=71.4
Q ss_pred eEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----------CCCcEEEEECCCCeEEEEecCC--------
Q 004785 130 TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRLWNASTAECIGSRDFY-------- 191 (730)
Q Consensus 130 tVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS----------~DgtVrLWDl~tg~~i~~l~h~-------- 191 (730)
+|.++|..+++.+..+..-..+ .+.++| +++.++.+. .+++|.+||+.+++.+..+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 8899999999999998755555 799999 666666654 4788999999999998887532
Q ss_pred CCeEEEEEcCCCCEEEEEEC---CeEEE--EEcCC
Q 004785 192 RPIASIAFHASGELLAVASG---HKLYI--WRYNM 221 (730)
Q Consensus 192 ~~V~sVafSPdG~~LAsgSd---d~I~V--WDl~t 221 (730)
.....++|+|||++|+++.. +.|.+ +|..+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 34568999999999999872 34888 98866
No 258
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.14 E-value=0.0044 Score=65.57 Aligned_cols=139 Identities=6% Similarity=-0.062 Sum_probs=91.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC------CC-------CCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEec
Q 004785 81 RRGLASWVEAESLHHLRPKYCPLS------PP-------PRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~L~------gH-------~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g 147 (730)
+..++.+..++.|..+|.+++++. .. ...+.+ ....++..|+.++.++.|..+|.++|+.+..+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 567777888889999998877421 11 122322 1222466788888999999999999998877765
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeE------EEEEcCCCCEEEEEE-CCeEEEEEcC
Q 004785 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIA------SIAFHASGELLAVAS-GHKLYIWRYN 220 (730)
Q Consensus 148 H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~------sVafSPdG~~LAsgS-dd~I~VWDl~ 220 (730)
........... +..++.++.++.|..+|..+|+.+..+.....+. ..... +..+++++ ++.|..+|..
T Consensus 132 ~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 132 AGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp SSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 44322223332 3567778889999999999999888766443321 22222 34566666 5569999998
Q ss_pred CCccc
Q 004785 221 MREET 225 (730)
Q Consensus 221 t~~~~ 225 (730)
+++..
T Consensus 207 tG~~~ 211 (376)
T 3q7m_A 207 QGQMI 211 (376)
T ss_dssp TCCEE
T ss_pred CCcEE
Confidence 88753
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.13 E-value=0.065 Score=57.07 Aligned_cols=169 Identities=11% Similarity=0.021 Sum_probs=106.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCcEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~----L~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~s 154 (730)
.+...++-...+.|..++..... +.........+++.+.+..| ++-...+.|.+.++........+.........
T Consensus 84 ~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~ 163 (349)
T 3v64_C 84 RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRA 163 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEE
T ss_pred ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcce
Confidence 34444555567888888876542 11223445789998855555 44455789999998755443444444456789
Q ss_pred EEEccCCCCEEEEEeCC-CcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeE
Q 004785 155 VRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRI 230 (730)
Q Consensus 155 VafSP~dg~lLaSgS~D-gtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t~~~~~~~~~ 230 (730)
++++|.++.++++-..+ +.|...++.......... .-...+.++|+|++..|+.+.. +.|..+|+...... ..
T Consensus 164 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~---~~ 240 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK---AV 240 (349)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EE
T ss_pred EEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE---EE
Confidence 99999566666665555 789999986543333222 2345789999999888888873 44999998754321 12
Q ss_pred EecCCCCeEEEEEccCCCeEEEE
Q 004785 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 231 l~~h~~~V~sVaFSPdG~~Llat 253 (730)
..........+++. .+ .+..+
T Consensus 241 ~~~~~~~P~giav~-~~-~ly~t 261 (349)
T 3v64_C 241 ISQGLPHPFAITVF-ED-SLYWT 261 (349)
T ss_dssp ECSSCSSEEEEEEE-TT-EEEEE
T ss_pred EeCCCCCceEEEEE-CC-EEEEe
Confidence 22334456777773 33 34444
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.13 E-value=0.058 Score=63.47 Aligned_cols=178 Identities=9% Similarity=0.005 Sum_probs=120.3
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCCCCC----------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE
Q 004785 73 IFEAGRDARRGLASWVEAESLHHLRPKYCPLS----------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL 142 (730)
Q Consensus 73 ll~a~~d~g~~L~Sgs~DgsIrlWd~~t~~L~----------gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l 142 (730)
+.....|....|+.|..++-|..|+..+..+. -....|.++...++|.+. .|+.++-|..||..+++..
T Consensus 312 i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~ 390 (795)
T 4a2l_A 312 VRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFT 390 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEE
T ss_pred EEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEE
Confidence 33344567788999999888999987654321 123469999999888654 5777777999998877643
Q ss_pred EEEec--------CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-----CCCCeEEEEEcCCCCEEEEE
Q 004785 143 KVLHG--------HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-----FYRPIASIAFHASGELLAVA 209 (730)
Q Consensus 143 ~~l~g--------H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-----h~~~V~sVafSPdG~~LAsg 209 (730)
..... ....|.++...+ +++++..|+.++-|.+||..+++...... ....|.++..+++|++.+..
T Consensus 391 ~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 391 SYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp EECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred EEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 32211 235688888877 67745567777779999998877554322 24578999999988865544
Q ss_pred ECCeEEEEEcCCCccccCCeE---EecCCCCeEEEEEccCCCeEEEE
Q 004785 210 SGHKLYIWRYNMREETSSPRI---VLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 210 Sdd~I~VWDl~t~~~~~~~~~---l~~h~~~V~sVaFSPdG~~Llat 253 (730)
.++|.+||..+++....... ..-....|.++...++|+..+.+
T Consensus 470 -~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 470 -LSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp -SSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred -cCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 46799999877643220000 01123678999999999866655
No 261
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.06 E-value=0.0028 Score=67.03 Aligned_cols=132 Identities=10% Similarity=0.040 Sum_probs=88.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEec-CCCCcEEEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYCPLS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG-HRRTPWVVRF 157 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~L~--gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g-H~~~V~sVaf 157 (730)
+..++.+..++.+..+|.+++++. ........+.. ++..|+.++.++.|..+|..+|+.+..... ....+.....
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 316 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL 316 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE
Confidence 456777788899999998877422 11223444444 467888888999999999999998877652 2223333333
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-CCCeEEEEEcCCCCEEEEEE-CCeEEEEE
Q 004785 158 HPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRPIASIAFHASGELLAVAS-GHKLYIWR 218 (730)
Q Consensus 158 SP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h-~~~V~sVafSPdG~~LAsgS-dd~I~VWD 218 (730)
. +..++.++.++.|.++|..+|+.+..... ...+.+.... .+..|++++ ++.|+.||
T Consensus 317 ~---~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 317 Y---NGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp E---TTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred E---CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 2 46777888999999999999998877654 3333221111 244566666 45688886
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.05 E-value=0.017 Score=66.33 Aligned_cols=162 Identities=9% Similarity=0.059 Sum_probs=98.9
Q ss_pred CeEEEEeCCCCC------CCCCC--------CCeEEEEEC-CCCC---EEEEEeCCCeEEEEECCCCeEEEEEecCCC--
Q 004785 91 ESLHHLRPKYCP------LSPPP--------RSTIAAAFS-PDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHRR-- 150 (730)
Q Consensus 91 gsIrlWd~~t~~------L~gH~--------~~Vt~lafS-PDG~---~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~-- 150 (730)
+.|.-+|.++++ +..|. ..+. +... .+|+ .++.++.+|.++++|.++|+.+..+.....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 578888888773 22332 1222 2222 4674 788899999999999999998876653320
Q ss_pred ----------C---------------------------------cEEEEEccCCCCEEEEEe------------------
Q 004785 151 ----------T---------------------------------PWVVRFHPLNPTIIASGS------------------ 169 (730)
Q Consensus 151 ----------~---------------------------------V~sVafSP~dg~lLaSgS------------------ 169 (730)
. -..++++|+.+.+++...
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 0 013566773333333221
Q ss_pred --------------CCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecC
Q 004785 170 --------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRT 234 (730)
Q Consensus 170 --------------~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h 234 (730)
.++.|..||+.+|+.+........+..-.....|.++++++ ++.++.||.++++.+-. .....
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~--~~~~~ 527 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK--FQTGS 527 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE--EECSS
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE--ecCCC
Confidence 36789999999999887766444333222223466777777 45599999999987541 11111
Q ss_pred CCCeEEEEEccCCCeEEEEEe
Q 004785 235 RRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 235 ~~~V~sVaFSPdG~~Llatgs 255 (730)
...-.-+.|..+|+.+++...
T Consensus 528 g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 528 GIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp CCCSCCEEEEETTEEEEEEEE
T ss_pred CcccCceEEEECCEEEEEEEc
Confidence 111123566788986666543
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.01 E-value=0.01 Score=68.03 Aligned_cols=136 Identities=10% Similarity=0.048 Sum_probs=88.2
Q ss_pred CCCC---EEEEEeCCCeEEEEECCCCeEEEEEecCC-------------CCc--------------------------EE
Q 004785 117 PDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHR-------------RTP--------------------------WV 154 (730)
Q Consensus 117 PDG~---~LaSgS~DgtVrVWDl~tg~~l~~l~gH~-------------~~V--------------------------~s 154 (730)
.+|+ .++.++.+|.++++|..+|+.+..++... .++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4774 57788889999999999999887664321 111 23
Q ss_pred EEEccCCCCEEEEEe-------------------------------------CCCcEEEEECCCCeEEEEecCCCCeEEE
Q 004785 155 VRFHPLNPTIIASGS-------------------------------------LDHEVRLWNASTAECIGSRDFYRPIASI 197 (730)
Q Consensus 155 VafSP~dg~lLaSgS-------------------------------------~DgtVrLWDl~tg~~i~~l~h~~~V~sV 197 (730)
++++| +..+++... .++.|..||+.+++.+..+.....+.+.
T Consensus 391 ~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~ 469 (571)
T 2ad6_A 391 DSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGG 469 (571)
T ss_dssp CEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSB
T ss_pred ceECC-CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccce
Confidence 57888 545554432 3578999999999998887655544444
Q ss_pred EEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 198 AFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 198 afSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.+...+..+++++ ++.|+.||.++++.+.. ........-.-+.+..+|+.++.+..
T Consensus 470 ~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~--~~~~~~~~~~p~~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 470 TLYTKGGLVWYATLDGYLKALDNKDGKELWN--FKMPSGGIGSPMTYSFKGKQYIGSMY 526 (571)
T ss_dssp CEEETTTEEEEECTTSEEEEEETTTCCEEEE--EECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eEEECCCEEEEEcCCCeEEEEECCCCCEEEE--EeCCCCcEeeeEEEEECCEEEEEEEC
Confidence 4444566777777 45699999999987541 11222111122446678886665544
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.01 E-value=0.03 Score=61.81 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=87.7
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCC----Ce-EEEEECCCCeE-EEEEecCCCC
Q 004785 81 RRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD----HT-VKIIDCQTGSC-LKVLHGHRRT 151 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSgS~D----gt-VrVWDl~tg~~-l~~l~gH~~~ 151 (730)
+..|+.....+.|+.++..++. +.........++|+++|+ |+.+... .. +...+...+.. ...+. ....
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~ 229 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARG 229 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSS
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCC
Confidence 3555555444889999987663 334455689999999999 4444331 22 33333322211 11222 2344
Q ss_pred cEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE-EEec--CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCC
Q 004785 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI-GSRD--FYRPIASIAFHASGELLAVASG--HKLYIWRYNM 221 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i-~~l~--h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t 221 (730)
...++++|.++.++++-..++.|+.+|..+++.. ..+. .......++|+|+|++|+++.. +.|+.+|++.
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 5678999866777777667889999999877662 2222 2223457999999998877763 4599988763
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.01 E-value=0.051 Score=58.72 Aligned_cols=169 Identities=11% Similarity=0.021 Sum_probs=105.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCcEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~----L~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~s 154 (730)
.+...++-...+.|..++..... +.........+++++.+..| ++-...+.|.+.++........+.........
T Consensus 127 ~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~g 206 (386)
T 3v65_B 127 RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRA 206 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEE
T ss_pred CCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcE
Confidence 34444555567788888876542 12222345678888755555 44455678999888655444444444466889
Q ss_pred EEEccCCCCEEEEEeCC-CcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeE
Q 004785 155 VRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRI 230 (730)
Q Consensus 155 VafSP~dg~lLaSgS~D-gtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t~~~~~~~~~ 230 (730)
|+++|.++.++++-..+ +.|...++.......... .-...+.++|+|++..|+.+.. +.|+.+|+...... ..
T Consensus 207 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~---~~ 283 (386)
T 3v65_B 207 IALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK---AV 283 (386)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE---EE
T ss_pred EEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE---EE
Confidence 99999566666665555 789999987543333332 3345789999998888888873 44999998654321 12
Q ss_pred EecCCCCeEEEEEccCCCeEEEE
Q 004785 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 231 l~~h~~~V~sVaFSPdG~~Llat 253 (730)
..........+++. .+ .++.+
T Consensus 284 ~~~~~~~P~giav~-~~-~ly~t 304 (386)
T 3v65_B 284 ISQGLPHPFAITVF-ED-SLYWT 304 (386)
T ss_dssp ECSSCSSEEEEEEE-TT-EEEEE
T ss_pred EECCCCCceEEEEE-CC-EEEEe
Confidence 22234456777773 33 34444
No 266
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.00 E-value=0.016 Score=63.74 Aligned_cols=139 Identities=13% Similarity=0.042 Sum_probs=92.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCC----C-eEEEEECCCCeEE--EEEecCCC
Q 004785 81 RRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD----H-TVKIIDCQTGSCL--KVLHGHRR 150 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSgS~D----g-tVrVWDl~tg~~l--~~l~gH~~ 150 (730)
+..|+.....+.|+.+|.+.+. +.........++|+++|++|+.+... . .+.+++. .+... ..+.. ..
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~ 226 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQ 226 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CS
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CC
Confidence 3455555545889999987653 22345568899999999977666541 1 3444443 33221 23322 23
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCC
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVAS--GHKLYIWRYNM 221 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l--~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~t 221 (730)
....++++|+++.++++-..++.|..+|..++...... ........++|+|+|++|+++. .+.|+.++.+.
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 46779999966777777777889999999877653332 2334578899999999777776 34599988764
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.89 E-value=0.21 Score=52.13 Aligned_cols=167 Identities=9% Similarity=-0.007 Sum_probs=101.0
Q ss_pred CCEEEEEeCCCeEEEEeCCC----CC----CCCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 81 RRGLASWVEAESLHHLRPKY----CP----LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t----~~----L~gH~~~Vt~lafSPDG~~La-SgS~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
+...++-...+.|..++... .. +.........+++++.+..|+ +-...+.|.++|.........+......
T Consensus 42 ~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 121 (316)
T 1ijq_A 42 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 121 (316)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCC
T ss_pred CEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCC
Confidence 34444555567788887664 11 112224567899987555554 4456789999998754433334434456
Q ss_pred cEEEEEccCCCCEEEEEeCC-CcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccC
Q 004785 152 PWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSS 227 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~D-gtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t~~~~~~ 227 (730)
...++++|.++.++++.... +.|...++......... ..-...+.++|++++..|+.+.. +.|..+|+.....
T Consensus 122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~--- 198 (316)
T 1ijq_A 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR--- 198 (316)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---
T ss_pred cceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce---
Confidence 88999998555555554443 68888888643332222 23356789999999988888873 4599999875322
Q ss_pred CeEEec---CCCCeEEEEEccCCCeEEEE
Q 004785 228 PRIVLR---TRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 228 ~~~l~~---h~~~V~sVaFSPdG~~Llat 253 (730)
..+.. .......+++. +..++.+
T Consensus 199 -~~~~~~~~~~~~P~giav~--~~~ly~~ 224 (316)
T 1ijq_A 199 -KTILEDEKRLAHPFSLAVF--EDKVFWT 224 (316)
T ss_dssp -EEEEECTTTTSSEEEEEEE--TTEEEEE
T ss_pred -EEEeecCCccCCcEEEEEE--CCEEEEE
Confidence 12221 22346677774 3345544
No 268
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.82 E-value=0.043 Score=57.93 Aligned_cols=163 Identities=10% Similarity=-0.026 Sum_probs=104.3
Q ss_pred CCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeE-EEEEecCCCCcEEEEEccCC
Q 004785 89 EAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSC-LKVLHGHRRTPWVVRFHPLN 161 (730)
Q Consensus 89 ~DgsIrlWd~~t~~-----L~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~-l~~l~gH~~~V~sVafSP~d 161 (730)
....|+.++++... +......+.+++|++.+..| .+-...+.|+.++...+.. ...+.........+++.+.+
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 35567777776542 11112346789999854444 4545578999999876632 12233333457789998756
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEecCCCC
Q 004785 162 PTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRS 237 (730)
Q Consensus 162 g~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~h~~~ 237 (730)
++++++-...+.|.++++......... ........++++|.+..|+.... ..|+..+++..... ......-..
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~l~~ 167 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF---IIINSEIYW 167 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSC
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE---EEEECCCCC
Confidence 777777777889999998754433333 34456789999998777777662 34888887643321 122223346
Q ss_pred eEEEEEccCCCeEEEEE
Q 004785 238 LRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 238 V~sVaFSPdG~~Llatg 254 (730)
...|+|++++..|..+-
T Consensus 168 Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ccEEEEeccCCEEEEEE
Confidence 78999999887777664
No 269
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.81 E-value=0.086 Score=54.36 Aligned_cols=152 Identities=9% Similarity=0.113 Sum_probs=99.1
Q ss_pred CCCCCCCCeEEEEECCCCCEEEE-EeCCCeEEEEECCCCeEEEEEec-CCCCcEEEEEccCCCCEEEEEeCCCcEEEEEC
Q 004785 102 PLSPPPRSTIAAAFSPDGKTLAS-THGDHTVKIIDCQTGSCLKVLHG-HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA 179 (730)
Q Consensus 102 ~L~gH~~~Vt~lafSPDG~~LaS-gS~DgtVrVWDl~tg~~l~~l~g-H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl 179 (730)
.+.+-...+..++|+|+++.|++ ...++.|...|.. ++.++.+.- -......|++.+ ++.++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEc
Confidence 35556667999999998766655 5668889999987 888887742 224578899988 7777777667788999987
Q ss_pred CCCeE---EEEe-------cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEEe-------cCCCCeEEE
Q 004785 180 STAEC---IGSR-------DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL-------RTRRSLRAV 241 (730)
Q Consensus 180 ~tg~~---i~~l-------~h~~~V~sVafSPdG~~LAsgSdd~-I~VWDl~t~~~~~~~~~l~-------~h~~~V~sV 241 (730)
..... +... ..+.....++|+|+++.|+++.... ..||.++............ .....+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65432 1222 1344579999999998888877433 4444443100000011111 123467899
Q ss_pred EEccCCCeEEEEEe
Q 004785 242 HFHPHAAPLLLTAE 255 (730)
Q Consensus 242 aFSPdG~~Llatgs 255 (730)
+|+|....+++.+.
T Consensus 179 ~~dp~tg~lliLS~ 192 (255)
T 3qqz_A 179 EFNQQKNTLLVLSH 192 (255)
T ss_dssp EEETTTTEEEEEET
T ss_pred EEcCCCCeEEEEEC
Confidence 99998776666554
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.051 Score=63.79 Aligned_cols=169 Identities=12% Similarity=0.038 Sum_probs=113.6
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCCCCC-------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe---
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYCPLS-------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH--- 146 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~~L~-------gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~--- 146 (730)
..+....|+.|..++-|..|+..+..+. .....|.++...++|.+.+ |+.++-|..+|..+++.. .+.
T Consensus 369 ~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~ 446 (781)
T 3v9f_A 369 CDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEK 446 (781)
T ss_dssp EECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTT
T ss_pred EEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCC
Confidence 3456678998987777888887654221 2345699999988876554 666677899998877643 332
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecC------CCCeEEEEEcCCCCEEEEEECCeEEEEEcC
Q 004785 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF------YRPIASIAFHASGELLAVASGHKLYIWRYN 220 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h------~~~V~sVafSPdG~~LAsgSdd~I~VWDl~ 220 (730)
.....|.++...+ ++.+.+ |+. +-|.++|..+++....... ...|.++..+++|++.+...+++|..||..
T Consensus 447 ~~~~~v~~i~~d~-~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 523 (781)
T 3v9f_A 447 NELLDVRVFYEDK-NKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPD 523 (781)
T ss_dssp TCCCCEEEEEECT-TSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTT
T ss_pred CCCCeEEEEEECC-CCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCC
Confidence 1345688888876 555554 444 5699999887765443221 357899999999986655445679889887
Q ss_pred CCccccCCeEEec---CCCCeEEEEEccCCCeEEEE
Q 004785 221 MREETSSPRIVLR---TRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 221 t~~~~~~~~~l~~---h~~~V~sVaFSPdG~~Llat 253 (730)
+.+... .... ....|.++...++|...+.+
T Consensus 524 ~~~~~~---~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 524 MQLVRK---FNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp CCEEEE---ECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred CCeEEE---ccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 654321 1101 24578999999999966655
No 271
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.79 E-value=0.051 Score=62.70 Aligned_cols=161 Identities=10% Similarity=0.055 Sum_probs=98.3
Q ss_pred CeEEEEeCCCCCC------CCCC--------CCeEEEEEC-CCC---CEEEEEeCCCeEEEEECCCCeEEEEEecCC---
Q 004785 91 ESLHHLRPKYCPL------SPPP--------RSTIAAAFS-PDG---KTLASTHGDHTVKIIDCQTGSCLKVLHGHR--- 149 (730)
Q Consensus 91 gsIrlWd~~t~~L------~gH~--------~~Vt~lafS-PDG---~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~--- 149 (730)
.+|.-+|.+++++ ..|. ..+. +... .+| +.++.++.+|.++++|.++|+.+...+...
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 356 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVN 356 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcc
Confidence 3688888887742 2332 2222 3332 567 467778899999999999999887654211
Q ss_pred ----------CCc--------------------------EEEEEccCCCCEEEEE-------------------------
Q 004785 150 ----------RTP--------------------------WVVRFHPLNPTIIASG------------------------- 168 (730)
Q Consensus 150 ----------~~V--------------------------~sVafSP~dg~lLaSg------------------------- 168 (730)
.++ ..++++| +..+++..
T Consensus 357 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 435 (599)
T 1w6s_A 357 VFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP-KRELFFMGINHICMDWEPFMLPYKAGQFFVGAT 435 (599)
T ss_dssp SEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred cccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC-CCCEEEEeccccceeeecccccccCCcceeccc
Confidence 011 2356777 44444332
Q ss_pred --------e------CCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEec
Q 004785 169 --------S------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 169 --------S------~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~ 233 (730)
+ .++.|..||+.+++.+.......+..+-.+.-.|.+|++++ ++.|+.||.++++.+-. ....
T Consensus 436 ~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~--~~l~ 513 (599)
T 1w6s_A 436 LNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK--FKIP 513 (599)
T ss_dssp EEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE--EECS
T ss_pred ceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE--eeCC
Confidence 1 34789999999999888775443333222333567777777 45599999999987541 1122
Q ss_pred CCCCeEEEEEccCCCeEEEEEe
Q 004785 234 TRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Llatgs 255 (730)
......-+.|..+|+.+++...
T Consensus 514 ~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 514 SGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp SCCCSCCEEEEETTEEEEEEEE
T ss_pred CCcEeccEEEEeCCEEEEEEEc
Confidence 2122233556678886666554
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.016 Score=63.83 Aligned_cols=142 Identities=11% Similarity=0.151 Sum_probs=87.4
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeC-CC----cEEEEECCC
Q 004785 108 RSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSL-DH----EVRLWNAST 181 (730)
Q Consensus 108 ~~Vt~lafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~-Dg----tVrLWDl~t 181 (730)
.....++|+| ++..|+.+...+.|+.+|..+++..... ........|+|++ +++.|+.+.. ++ .+.+.+. .
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC-C
Confidence 3567899998 4666776666588999999877644433 3455688999999 7774444443 22 2333443 3
Q ss_pred CeEE--EEecCCCCeEEEEEcC-CCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 182 AECI--GSRDFYRPIASIAFHA-SGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 182 g~~i--~~l~h~~~V~sVafSP-dG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
+... ..+........++++| +|.++++-. .++|+.+|........ ..........+.++|+|+|++|+.+.
T Consensus 214 g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~--~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTP--LFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE--EEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE--EEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 3221 2222233456788999 555444433 4569999987654311 11122234578999999999666654
No 273
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.75 E-value=0.1 Score=62.27 Aligned_cols=166 Identities=10% Similarity=0.009 Sum_probs=109.5
Q ss_pred EEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEECCCC----eEEEEEecCCCCcEEEEE
Q 004785 86 SWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTG----SCLKVLHGHRRTPWVVRF 157 (730)
Q Consensus 86 Sgs~DgsIrlWd~~t~---~L~gH~~~Vt~lafSPDG~~La-SgS~DgtVrVWDl~tg----~~l~~l~gH~~~V~sVaf 157 (730)
.......|+..++... .+......+..|+|++....|+ +-...+.|+.+++... .....+.........|++
T Consensus 399 l~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 399 FFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp EEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 3445566777776544 2334456788999998555554 4455688999998653 233444445566788999
Q ss_pred ccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEec
Q 004785 158 HPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLR 233 (730)
Q Consensus 158 SP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~ 233 (730)
.+.+++++++-...+.|.+.++........+. .-.....|+++|.+.+|+.... .+|.+.++....... .+..
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~---lv~~ 555 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTE 555 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE---EECS
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE---EEeC
Confidence 98566777787788999999998655433332 3456889999998777777762 348888886543311 2223
Q ss_pred CCCCeEEEEEccCCCeEEEEE
Q 004785 234 TRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 234 h~~~V~sVaFSPdG~~Llatg 254 (730)
.-.....|++++.+..|..+-
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEEecCCCeEEEEe
Confidence 345789999998877776663
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.62 E-value=0.27 Score=53.32 Aligned_cols=170 Identities=9% Similarity=-0.024 Sum_probs=104.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-------C-CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCC
Q 004785 80 ARRGLASWVEAESLHHLRPKYC-------P-LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~-------~-L~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~~ 150 (730)
.+...++-...+.|+.+++... . +.........+++.+.+..| ++-...+.|.+.++........+.....
T Consensus 123 ~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~ 202 (400)
T 3p5b_L 123 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS 202 (400)
T ss_dssp TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC
T ss_pred cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC
Confidence 3444445556778888887541 1 22234567899999854444 4445578999999876655445554555
Q ss_pred CcEEEEEccCCCCEEEEEeC-CCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCcccc
Q 004785 151 TPWVVRFHPLNPTIIASGSL-DHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETS 226 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~-DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t~~~~~ 226 (730)
....|+++|.++.++.+-.. .+.|...++.......... .-...+.+++++++..|+.+.. +.|..+|++......
T Consensus 203 ~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~ 282 (400)
T 3p5b_L 203 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 282 (400)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEE
T ss_pred CcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEE
Confidence 68899999955555555433 4789999987544333332 2357789999999998888873 459999986543211
Q ss_pred CCeEEec--CCCCeEEEEEccCCCeEEEEE
Q 004785 227 SPRIVLR--TRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 227 ~~~~l~~--h~~~V~sVaFSPdG~~Llatg 254 (730)
.... .-.....+++ ++..++.+.
T Consensus 283 ---~~~~~~~l~~P~gl~v--~~~~lywtd 307 (400)
T 3p5b_L 283 ---ILEDEKRLAHPFSLAV--FEDKVFWTD 307 (400)
T ss_dssp ---EEECSSTTSSEEEEEE--ETTEEEEEE
T ss_pred ---EEeCCCCCCCCEEEEE--eCCEEEEec
Confidence 2221 1234556666 344455543
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.62 E-value=0.081 Score=54.59 Aligned_cols=160 Identities=12% Similarity=0.003 Sum_probs=90.9
Q ss_pred eEEEEeCCCCCCC-----CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeE-EEEEec---------CCCCcEEEE
Q 004785 92 SLHHLRPKYCPLS-----PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC-LKVLHG---------HRRTPWVVR 156 (730)
Q Consensus 92 sIrlWd~~t~~L~-----gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~-l~~l~g---------H~~~V~sVa 156 (730)
.|..++..++++. ........+++.+++..+++-..++.|+++|..+++. +....+ .....+.|
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 4555665554321 1122345556555555555544688999999876532 221111 11234555
Q ss_pred EccCCCCEEEEEeCCCcEEEEECCC-CeE--EEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEEe
Q 004785 157 FHPLNPTIIASGSLDHEVRLWNAST-AEC--IGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVL 232 (730)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~t-g~~--i~~l~h~~~V~sVafSPdG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~ 232 (730)
+++++.++++-...+.|..+|+.. ++. ...+........++++++|+++++.. .+.|.++|.. ++... ...+.
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~-~~~~~ 251 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTI-IAQAE 251 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEE-EECGG
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEE-Eeecc
Confidence 773345666666788999999875 331 11121123456789999998655444 4569999875 33211 00111
Q ss_pred cCCCCeEEEEEc---cCCCeEEEEEe
Q 004785 233 RTRRSLRAVHFH---PHAAPLLLTAE 255 (730)
Q Consensus 233 ~h~~~V~sVaFS---PdG~~Llatgs 255 (730)
..-....+++|. ||+++|+++..
T Consensus 252 ~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 252 QGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp GTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cccCCceEEEEecccCCCCEEEEECC
Confidence 123568999999 89887777654
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.51 E-value=0.17 Score=59.24 Aligned_cols=173 Identities=4% Similarity=-0.062 Sum_probs=114.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCCCC-------------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYCPLS-------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC 141 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~~L~-------------gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~ 141 (730)
....|....|+.|..++-|..++.....+. -....|.++...++|.+ ..|+.++-|.+||..++..
T Consensus 317 ~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~ 395 (781)
T 3v9f_A 317 YIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVA 395 (781)
T ss_dssp EEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEE
T ss_pred EEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeE
Confidence 334566778999998888888987754321 02346999999888764 4566666688899765543
Q ss_pred EEEE---ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec---CCCCeEEEEEcCCCCEEEEEECCeEE
Q 004785 142 LKVL---HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGELLAVASGHKLY 215 (730)
Q Consensus 142 l~~l---~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~---h~~~V~sVafSPdG~~LAsgSdd~I~ 215 (730)
.... ......|.++...+ ++.+.+ |+.++-|..+|..+++...... ....|.++..+++|++. .|+.++|.
T Consensus 396 ~~~~~~~~~~~~~v~~i~~d~-~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw-igt~~Gl~ 472 (781)
T 3v9f_A 396 IYNKENRELLSNSVLCSLKDS-EGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW-IGTHAGVF 472 (781)
T ss_dssp ECC-----CCCSBEEEEEECT-TSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE-EEETTEEE
T ss_pred EEccCCCCCCCcceEEEEECC-CCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE-EEECCceE
Confidence 2111 12335688888876 565555 6666779999998876544321 34678999998888744 45557899
Q ss_pred EEEcCCCccccCCeEEecC-----CCCeEEEEEccCCCeEEEEE
Q 004785 216 IWRYNMREETSSPRIVLRT-----RRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h-----~~~V~sVaFSPdG~~Llatg 254 (730)
+||..+++... ..... ...|.++...++|+..+.+.
T Consensus 473 ~~~~~~~~~~~---~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 473 VIDLASKKVIH---HYDTSNSQLLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp EEESSSSSCCE---EECTTTSSCSCSCEEEEEECTTCCEEEEES
T ss_pred EEeCCCCeEEe---cccCcccccccceeEEEEEcCCCCEEEEEc
Confidence 99987764321 11111 35789999999999666653
No 277
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.48 E-value=0.35 Score=55.98 Aligned_cols=162 Identities=7% Similarity=-0.048 Sum_probs=109.7
Q ss_pred CCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCC
Q 004785 89 EAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNP 162 (730)
Q Consensus 89 ~DgsIrlWd~~t~~-----L~gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg 162 (730)
....|+..+++... ....-..+..++|++++..|+.+ ..++.|+.+++........+.........+++.+.++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 56678888876542 11234568899999966665544 4578999999876544444443335678899987567
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEE---CCeEEEEEcCCCccccCCeEEecCCCCe
Q 004785 163 TIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVAS---GHKLYIWRYNMREETSSPRIVLRTRRSL 238 (730)
Q Consensus 163 ~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgS---dd~I~VWDl~t~~~~~~~~~l~~h~~~V 238 (730)
+++++-...+.|.+.|+........+ ..-.....++++|....|+... ..+|...++..... ..+...-...
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~----~~l~~~~~~P 168 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER----TTLVPNVGRA 168 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EEEECSCSSE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce----EEEECCCCCc
Confidence 77777777889999999755433333 3345678999999777777666 23488787765442 2333455678
Q ss_pred EEEEEccCCCeEEEEE
Q 004785 239 RAVHFHPHAAPLLLTA 254 (730)
Q Consensus 239 ~sVaFSPdG~~Llatg 254 (730)
..|++++++..|..+-
T Consensus 169 ~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTD 184 (628)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred ceEEEccccCEEEEEE
Confidence 8999999888776654
No 278
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.43 E-value=0.11 Score=56.02 Aligned_cols=173 Identities=10% Similarity=0.090 Sum_probs=107.1
Q ss_pred CEEEEEeCCCeEEEEeCCCCCCCCCC-CCeEEEEECCC----CCE--EEEEeC----CCeEEEEEC--CCCeEEEEEec-
Q 004785 82 RGLASWVEAESLHHLRPKYCPLSPPP-RSTIAAAFSPD----GKT--LASTHG----DHTVKIIDC--QTGSCLKVLHG- 147 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~L~gH~-~~Vt~lafSPD----G~~--LaSgS~----DgtVrVWDl--~tg~~l~~l~g- 147 (730)
..++.-.+.+-+.+||+.-..+.... +.++.+..-|+ |+. |+.+++ +++|.+|++ .+++ +..+..
T Consensus 41 s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~ 119 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDP 119 (355)
T ss_dssp CEEEEEETTTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCT
T ss_pred cEEEEEcCCCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecccc
Confidence 33455556667888888433222112 56777777662 332 333333 578999977 3443 555521
Q ss_pred -----CC-CCcEEEEE--ccCCCC-EEEEEeCCCcEEEEECC-------CCeEEEEecCCCCeEEEEEcCCCCEEEEEEC
Q 004785 148 -----HR-RTPWVVRF--HPLNPT-IIASGSLDHEVRLWNAS-------TAECIGSRDFYRPIASIAFHASGELLAVASG 211 (730)
Q Consensus 148 -----H~-~~V~sVaf--SP~dg~-lLaSgS~DgtVrLWDl~-------tg~~i~~l~h~~~V~sVafSPdG~~LAsgSd 211 (730)
.. ..+..+++ +|.++. +++....++.+..|++. +.+.++.+.....+..+..++....|+++-.
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eE 199 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEE 199 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEET
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecc
Confidence 11 56777888 664454 67778889999999883 3456777888889999999999999999986
Q ss_pred Ce-EEEEEcCCCcccc-CCeEEec--C-CCCeEEEEE--ccCCC-eEEEEEe
Q 004785 212 HK-LYIWRYNMREETS-SPRIVLR--T-RRSLRAVHF--HPHAA-PLLLTAE 255 (730)
Q Consensus 212 d~-I~VWDl~t~~~~~-~~~~l~~--h-~~~V~sVaF--SPdG~-~Llatgs 255 (730)
+. |..+|.+-..... ....... + ...+..|++ .++|+ +|++++.
T Consensus 200 d~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 200 DEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp TTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred cceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 54 7667754222100 0111111 1 246888888 56676 6776663
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.42 E-value=0.54 Score=48.31 Aligned_cols=165 Identities=12% Similarity=0.066 Sum_probs=96.2
Q ss_pred EeCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeE---EEEEe------cCCCCc
Q 004785 87 WVEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC---LKVLH------GHRRTP 152 (730)
Q Consensus 87 gs~DgsIrlWd~~t~-----~L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~---l~~l~------gH~~~V 152 (730)
..+++.|...|.... .+.+ ....-.+++.+++.++++.-.++.+.++++..... +.... ......
T Consensus 45 ~d~~~~I~~ld~~g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~ 123 (255)
T 3qqz_A 45 INKPAAIVEMTTNGDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGF 123 (255)
T ss_dssp EETTEEEEEEETTCCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCC
T ss_pred ECCCCeEEEEeCCCCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCc
Confidence 445666666666521 1222 24578899998887766655678899998765432 23332 123446
Q ss_pred EEEEEccCCCCEEEEEeCCC-cEEEEEC-CCCeEEEEec--------CCCCeEEEEEcCCCCEEEEEECC--eEEEEEcC
Q 004785 153 WVVRFHPLNPTIIASGSLDH-EVRLWNA-STAECIGSRD--------FYRPIASIAFHASGELLAVASGH--KLYIWRYN 220 (730)
Q Consensus 153 ~sVafSP~dg~lLaSgS~Dg-tVrLWDl-~tg~~i~~l~--------h~~~V~sVafSPdG~~LAsgSdd--~I~VWDl~ 220 (730)
..++|+|.++.++++.-.+. .|+.|+- .....+..+. +...+.+++++|....|++.++. .|.++|..
T Consensus 124 EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 124 EGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp EEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC
Confidence 89999994444555444444 4555551 1111112111 23467899999987777777743 38888876
Q ss_pred CCccccCCeEEecC-------CCCeEEEEEccCCCeEEEEEe
Q 004785 221 MREETSSPRIVLRT-------RRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 221 t~~~~~~~~~l~~h-------~~~V~sVaFSPdG~~Llatgs 255 (730)
.. ... ...+... -..-..|+|.++|+ |..+++
T Consensus 204 g~-~~~-~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE 242 (255)
T 3qqz_A 204 GE-VIG-EMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSE 242 (255)
T ss_dssp CC-EEE-EEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEET
T ss_pred CC-EEE-EEEcCCccCCcccccCCCCeeEECCCCC-EEEEcC
Confidence 44 322 1122211 13668999999998 555554
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.41 E-value=0.36 Score=57.53 Aligned_cols=143 Identities=10% Similarity=-0.043 Sum_probs=93.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCC--------CCCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCC
Q 004785 81 RRGLASWVEAESLHHLRPKYC--------PLSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRT 151 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~--------~L~gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~~~ 151 (730)
+...++-...+.|+.+++... .+.........|++.+.++.|+.+ ...+.|.+.++........+......
T Consensus 436 ~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~ 515 (791)
T 3m0c_C 436 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 515 (791)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCC
T ss_pred CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCC
Confidence 344445556677877777532 122234456789999877655554 55789999998755544444445556
Q ss_pred cEEEEEccCCCCEEEEEeCC-CcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCc
Q 004785 152 PWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMRE 223 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~D-gtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t~~ 223 (730)
...|+++|.++.++++-..+ +.|.+.++........+. .-...+.|++++.+..|+.+.. +.|..+|+....
T Consensus 516 P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 516 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 88999999556666654333 789999987544433333 2357899999998888888873 449999986543
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.39 E-value=0.43 Score=50.14 Aligned_cols=169 Identities=9% Similarity=-0.069 Sum_probs=102.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCcE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~L-----~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~ 153 (730)
.+...++-...+.|..++...... .........+++.+.+..| ++-...+.|.++++........+........
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~ 125 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPR 125 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCcc
Confidence 344445555677888888765421 1122346678998755444 4445578999999865443333334456678
Q ss_pred EEEEccCCCCEEEEEe-CCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCe
Q 004785 154 VVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPR 229 (730)
Q Consensus 154 sVafSP~dg~lLaSgS-~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t~~~~~~~~ 229 (730)
.++++|.++.++.+-. ..+.|...++.......... .-...+.++|+|++..|+.+.. +.|+.+|++..... .
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~---~ 202 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ---A 202 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---E
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE---E
Confidence 9999984455555542 35788888886433222222 2345689999999888888873 45999998753321 1
Q ss_pred EEecCCCCeEEEEEccCCCeEEEE
Q 004785 230 IVLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 230 ~l~~h~~~V~sVaFSPdG~~Llat 253 (730)
...........+++.. ..++.+
T Consensus 203 ~~~~~~~~P~glav~~--~~lywt 224 (318)
T 3sov_A 203 VVKGSLPHPFALTLFE--DILYWT 224 (318)
T ss_dssp EECSCCSCEEEEEEET--TEEEEE
T ss_pred EecCCCCCceEEEEeC--CEEEEE
Confidence 2222344566777753 334444
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.20 E-value=0.091 Score=60.67 Aligned_cols=176 Identities=9% Similarity=-0.011 Sum_probs=102.6
Q ss_pred cCCCEEEEEe-CCCeEEEEeCCCCC---CC--CCCCCeEEEEECCCCCEEEEEe-CC-----CeEEEEECCCCeEEEE--
Q 004785 79 DARRGLASWV-EAESLHHLRPKYCP---LS--PPPRSTIAAAFSPDGKTLASTH-GD-----HTVKIIDCQTGSCLKV-- 144 (730)
Q Consensus 79 d~g~~L~Sgs-~DgsIrlWd~~t~~---L~--gH~~~Vt~lafSPDG~~LaSgS-~D-----gtVrVWDl~tg~~l~~-- 144 (730)
.+++.++.|+ .+..+.+||..+.+ +. .....-.++++.+||++++.|+ .+ ..+.+||..+++-...
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~ 331 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPN 331 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETT
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCC
Confidence 4556666666 45689999987652 11 1122234566667899999998 34 5799999877642221
Q ss_pred -----------------------EecCCC---------------------------------------CcEEEEEccCCC
Q 004785 145 -----------------------LHGHRR---------------------------------------TPWVVRFHPLNP 162 (730)
Q Consensus 145 -----------------------l~gH~~---------------------------------------~V~sVafSP~dg 162 (730)
+-+..+ .-.++.|...++
T Consensus 332 ~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~ 411 (656)
T 1k3i_A 332 AKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG 411 (656)
T ss_dssp SCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTT
T ss_pred ccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCC
Confidence 000000 012233323367
Q ss_pred CEEEEEeCCC-----------cEEEEECCCCeEEEEe----cCCCCeEEEEEcCCCCEEEEEEC------------CeEE
Q 004785 163 TIIASGSLDH-----------EVRLWNASTAECIGSR----DFYRPIASIAFHASGELLAVASG------------HKLY 215 (730)
Q Consensus 163 ~lLaSgS~Dg-----------tVrLWDl~tg~~i~~l----~h~~~V~sVafSPdG~~LAsgSd------------d~I~ 215 (730)
++++.|+.++ .|.+||..+.+..... .....-.+.+..|+|+++++|+. ..+.
T Consensus 412 ~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~ 491 (656)
T 1k3i_A 412 KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPE 491 (656)
T ss_dssp EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCE
T ss_pred eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceE
Confidence 7788877542 6888888877655443 22233345667789999999872 2389
Q ss_pred EEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+||..+.+-.. .......+.......+.+||+.+++++.
T Consensus 492 ~ydp~t~~W~~-~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 492 IYVPEQDTFYK-QNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEGGGTEEEE-CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred EEcCCCCceee-cCCCCCccccccHhhcCCCcEEEecCCC
Confidence 99987764321 1111112223344556799997666664
No 283
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.19 E-value=0.093 Score=56.24 Aligned_cols=143 Identities=12% Similarity=0.117 Sum_probs=92.7
Q ss_pred CeEEEEECCCCCEEEEEe-CCCeEEEEECCCCeEEEE-Eec----CCC--CcEEEEE---ccCCCCEEEEEe--------
Q 004785 109 STIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKV-LHG----HRR--TPWVVRF---HPLNPTIIASGS-------- 169 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~~-l~g----H~~--~V~sVaf---SP~dg~lLaSgS-------- 169 (730)
.-.+++|.+....|+.++ ..++|..||...+..... +.+ ... .+..|.| .| ++.++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEccccccccc
Confidence 345789988555555555 689999999876654333 222 111 3578999 68 677777543
Q ss_pred -----CCCcEEEEECC---CCeEEEEecC--------------CCCeEEEEEcCCCCEEEEEE-C-CeEEEEEcCCCccc
Q 004785 170 -----LDHEVRLWNAS---TAECIGSRDF--------------YRPIASIAFHASGELLAVAS-G-HKLYIWRYNMREET 225 (730)
Q Consensus 170 -----~DgtVrLWDl~---tg~~i~~l~h--------------~~~V~sVafSPdG~~LAsgS-d-d~I~VWDl~t~~~~ 225 (730)
.+..|..+|+. +++.+..... ....+.++.+++|+..++++ . +.|..++......
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~- 171 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV- 171 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE-
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE-
Confidence 26779999999 7877665431 12478999999999888777 4 4466666544321
Q ss_pred cCCeEEe----cCCCCeEEEEEccCCCeEEEEE
Q 004785 226 SSPRIVL----RTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 226 ~~~~~l~----~h~~~V~sVaFSPdG~~Llatg 254 (730)
. ..... ......+.++++|+|+.|++..
T Consensus 172 ~-~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 172 S-TFAWESGNGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp E-EEEECCCCSSSCCSCSEEEEETTTTEEEEES
T ss_pred e-eeeecCCCcccccCcceEEEeCCCCEEEEEc
Confidence 1 01111 1123467999999999777654
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.15 E-value=0.25 Score=51.80 Aligned_cols=141 Identities=9% Similarity=0.038 Sum_probs=85.5
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCeEEEEEC--CCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCC
Q 004785 105 PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDC--QTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA 182 (730)
Q Consensus 105 gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl--~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg 182 (730)
++...+..+.+.+++.+++.+......+-+|- .+-+.+. ......+..+.+.+ ++.+++ ++.+|.+++++...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~-~g~~~~-~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTP-DGRLWM-IVNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECT-TSCEEE-EETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECC-CCCEEE-EeCCceEEEecCCCC
Confidence 45667999999999888877654443444442 2223321 23456788899988 666554 456788887753334
Q ss_pred eEEEEec-----CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEEe---cCCCCeEEEEEccCCCeEEEEE
Q 004785 183 ECIGSRD-----FYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVL---RTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 183 ~~i~~l~-----h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~~l~---~h~~~V~sVaFSPdG~~Llatg 254 (730)
+....+. ....+..+.|.+++++++++.++.|+ +..+.++.-. .+. .....++.+.|.++++ +++.+
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~DgG~tW~---~~~~~~~~~~~~~~v~~~~~~~-~~~~G 310 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQDGGQTWQ---QDVDVKKVPSNFYKILFFSPDQ-GFILG 310 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EESSTTSSCE---ECGGGTTSSSCCCEEEEEETTE-EEEEC
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeCCCCcccE---EcCccCCCCCCeEEEEEECCCc-eEEEc
Confidence 4333222 22358899999999888888777663 4444443211 222 1235678898986665 44443
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.15 E-value=0.16 Score=54.42 Aligned_cols=141 Identities=9% Similarity=0.006 Sum_probs=95.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC-----CCC----CC--CCeEEEEE---CCCCCEEEEEe-------------CCCeEE
Q 004785 80 ARRGLASWVEAESLHHLRPKYCP-----LSP----PP--RSTIAAAF---SPDGKTLASTH-------------GDHTVK 132 (730)
Q Consensus 80 ~g~~L~Sgs~DgsIrlWd~~t~~-----L~g----H~--~~Vt~laf---SPDG~~LaSgS-------------~DgtVr 132 (730)
.+..+++-...++|..|+...+. +.+ .. ..+..|.| .|+++++++.. .+..|.
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~ 103 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFH 103 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEE
Confidence 34444455577888888876441 111 11 13589999 68887777543 267899
Q ss_pred EEECC---CCeEEEEEe--cC-----------CCCcEEEEEccCCCCEEEEEeCC-CcEEEEECCCCeEEEEe-cC----
Q 004785 133 IIDCQ---TGSCLKVLH--GH-----------RRTPWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSR-DF---- 190 (730)
Q Consensus 133 VWDl~---tg~~l~~l~--gH-----------~~~V~sVafSP~dg~lLaSgS~D-gtVrLWDl~tg~~i~~l-~h---- 190 (730)
.||+. +++.+.... .. ......++..+ +++..++++.- +.|...|.......... ..
T Consensus 104 ~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~ 182 (334)
T 2p9w_A 104 SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGG 182 (334)
T ss_dssp EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSS
T ss_pred EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcc
Confidence 99999 787765543 11 12477899999 89999998888 88888887643222111 11
Q ss_pred -CCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCC
Q 004785 191 -YRPIASIAFHASGELLAVASG-HKLYIWRYNM 221 (730)
Q Consensus 191 -~~~V~sVafSPdG~~LAsgSd-d~I~VWDl~t 221 (730)
....+.|+++|+|+.|++... +.|..+|+..
T Consensus 183 ~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 183 QRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp SCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred cccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 224679999999998888764 4499999884
No 286
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.10 E-value=0.016 Score=66.27 Aligned_cols=81 Identities=9% Similarity=0.074 Sum_probs=56.3
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCe--EEEEEcCCCCE
Q 004785 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPI--ASIAFHASGEL 205 (730)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V--~sVafSPdG~~ 205 (730)
++.|..||+.+|+.+..++... .+....+.. .+.+++.++.|+.|+.||.++|+.+..+.....+ ..+.+..+|+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESS-CCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEECCCCCEEEEecCCC-CccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 4789999999999887775432 233333333 4567777899999999999999999887644333 23445678875
Q ss_pred EEEEE
Q 004785 206 LAVAS 210 (730)
Q Consensus 206 LAsgS 210 (730)
++...
T Consensus 521 yv~~~ 525 (571)
T 2ad6_A 521 YIGSM 525 (571)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55443
No 287
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.06 E-value=0.42 Score=51.57 Aligned_cols=161 Identities=11% Similarity=0.075 Sum_probs=97.5
Q ss_pred CCCeEEEEeCCCC--C-----CCC-----CCCCeEEEEECC--CCC-EEEEE-eC--CCeEEEEECCCC-e---EEEEEe
Q 004785 89 EAESLHHLRPKYC--P-----LSP-----PPRSTIAAAFSP--DGK-TLAST-HG--DHTVKIIDCQTG-S---CLKVLH 146 (730)
Q Consensus 89 ~DgsIrlWd~~t~--~-----L~g-----H~~~Vt~lafSP--DG~-~LaSg-S~--DgtVrVWDl~tg-~---~l~~l~ 146 (730)
.+|.|.++|.+.. + +.+ ..-....+.+.+ +|. +|+.+ .. +.+|.+|++..+ . .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6888999998632 1 222 223567777755 454 34443 33 567888776543 2 223444
Q ss_pred cCC-CCcEEEEEccCCCCEEEEEeC-----------------CCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEE
Q 004785 147 GHR-RTPWVVRFHPLNPTIIASGSL-----------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAV 208 (730)
Q Consensus 147 gH~-~~V~sVafSP~dg~lLaSgS~-----------------DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAs 208 (730)
+.. ...+.+.+.+ ++.++++... .+.|..+|. ++.......-...+.++|+|||+.|++
T Consensus 161 g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEE
Confidence 322 3478899999 8887777541 244555555 333333333355789999999999988
Q ss_pred EE--CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEcc-CCCeEEEE
Q 004785 209 AS--GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHP-HAAPLLLT 253 (730)
Q Consensus 209 gS--dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSP-dG~~Llat 253 (730)
+. .++|+.||+...........+ ......-.+++.+ +|+..+++
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 87 355999998743322212222 3345677899999 59866544
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.05 E-value=0.13 Score=58.00 Aligned_cols=140 Identities=14% Similarity=0.098 Sum_probs=90.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC-------CCCCCeEEEEE-------CCCCCEEEEEeCCC-------eEEEEECCC-
Q 004785 81 RRGLASWVEAESLHHLRPKYCPLS-------PPPRSTIAAAF-------SPDGKTLASTHGDH-------TVKIIDCQT- 138 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~L~-------gH~~~Vt~laf-------SPDG~~LaSgS~Dg-------tVrVWDl~t- 138 (730)
+..+++....+.|++.|.+.+.+. ........++| +++|++|+.+...+ .|.+++...
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 334444444567999998876321 12235899999 99999777776543 366666443
Q ss_pred CeEE-----EEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECC-------CCeE--------------EEEecCCC
Q 004785 139 GSCL-----KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-------TAEC--------------IGSRDFYR 192 (730)
Q Consensus 139 g~~l-----~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~-------tg~~--------------i~~l~h~~ 192 (730)
|... ..+... .....++++|+++.++++-..++.|..+|+. +++. +.......
T Consensus 232 G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~ 310 (496)
T 3kya_A 232 GTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS 310 (496)
T ss_dssp SCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred CceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence 2221 222221 2345789999777778888888899999997 5543 12233345
Q ss_pred CeEEEEEcCCCCEEEEEE--CCeEEEEEcCC
Q 004785 193 PIASIAFHASGELLAVAS--GHKLYIWRYNM 221 (730)
Q Consensus 193 ~V~sVafSPdG~~LAsgS--dd~I~VWDl~t 221 (730)
....++|+|+|++|+++. .+.|+.+|+..
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 568999999999877776 34588877644
No 289
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.05 E-value=0.023 Score=65.17 Aligned_cols=82 Identities=17% Similarity=0.255 Sum_probs=58.5
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeE--EEEEcCCCC-
Q 004785 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIA--SIAFHASGE- 204 (730)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~--sVafSPdG~- 204 (730)
++.|..||+.+|+.+..++... .+..-.... .+.+++.++.|+.++.||.++|+.+..+.....+. -+.|..+|+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 5789999999999887776432 222222222 45678889999999999999999999877555443 367778887
Q ss_pred EEEEEEC
Q 004785 205 LLAVASG 211 (730)
Q Consensus 205 ~LAsgSd 211 (730)
++++.+.
T Consensus 543 Yv~~~~G 549 (582)
T 1flg_A 543 YLGVTVG 549 (582)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 5555543
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.05 E-value=0.097 Score=59.09 Aligned_cols=145 Identities=10% Similarity=0.061 Sum_probs=88.4
Q ss_pred CeEEEEECC-CCCEEEEEeC-CCeEEEEECCCCeEEEEEecCC---CCcEEEEE-------ccCCCCEEEEEeCCC----
Q 004785 109 STIAAAFSP-DGKTLASTHG-DHTVKIIDCQTGSCLKVLHGHR---RTPWVVRF-------HPLNPTIIASGSLDH---- 172 (730)
Q Consensus 109 ~Vt~lafSP-DG~~LaSgS~-DgtVrVWDl~tg~~l~~l~gH~---~~V~sVaf-------SP~dg~lLaSgS~Dg---- 172 (730)
....|+|+| +...|+.+.. .+.|++.|++++.....+..-. .....|+| ++ +++.++.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCcc
Confidence 467999999 4555665554 4679999998887655544321 24788999 99 666555544433
Q ss_pred ---cEEEEECCC-CeEE-----EEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC-------CCcc------c---
Q 004785 173 ---EVRLWNAST-AECI-----GSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYN-------MREE------T--- 225 (730)
Q Consensus 173 ---tVrLWDl~t-g~~i-----~~l~h~~~V~sVafSPdG~~LAsgS--dd~I~VWDl~-------t~~~------~--- 225 (730)
.|.+.+... ++.. ..+........++++|++..|+++. ++.|+.+|+. ++.. .
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266776443 2221 1222122445788999777666665 3459999987 4442 0
Q ss_pred -cCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 226 -SSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 226 -~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
.............+.|+|+|+|++|..+-
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 00111222344568999999999655543
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.94 E-value=0.69 Score=53.37 Aligned_cols=164 Identities=9% Similarity=-0.030 Sum_probs=103.1
Q ss_pred eCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCCCeE-EEEEecCCCCcEEEEEccC
Q 004785 88 VEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSC-LKVLHGHRRTPWVVRFHPL 160 (730)
Q Consensus 88 s~DgsIrlWd~~t~-----~L~gH~~~Vt~lafSPDG~~LaSgS-~DgtVrVWDl~tg~~-l~~l~gH~~~V~sVafSP~ 160 (730)
.+...|+..++... .+.........++|++.+..|+.+. ..+.|+.+++..... ...+.........+++.+.
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 34556666666532 1233455688999999766666554 467899999875532 2334333356889999985
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEecCCC
Q 004785 161 NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRR 236 (730)
Q Consensus 161 dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~h~~ 236 (730)
+++++++-...+.|.+.|+......... ..-.....|+++|.+.+|+.... .+|...+++..... ......-.
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~---~l~~~~~~ 171 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF---IIINSEIY 171 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCS
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE---EEEeCCCC
Confidence 6667777777889999999765433333 33445678999998777777662 34776676543321 12223345
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004785 237 SLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 237 ~V~sVaFSPdG~~Llatg 254 (730)
....|++++++..|..+-
T Consensus 172 ~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp SEEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEccCCEEEEEe
Confidence 678999999877776653
No 292
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.90 E-value=0.29 Score=51.40 Aligned_cols=187 Identities=10% Similarity=0.001 Sum_probs=110.4
Q ss_pred EEEECCCCCEEEEEeCC--------------CeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----CCCc
Q 004785 112 AAAFSPDGKTLASTHGD--------------HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----LDHE 173 (730)
Q Consensus 112 ~lafSPDG~~LaSgS~D--------------gtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS----~Dgt 173 (730)
+--|+++|.+|+..... ..|+..++..++... +.... ...|++ +++.|+-.. .+..
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~~----~~~~s~-~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPDP----CIYASL-IGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECSC----EEEEEE-ETTEEEEEEESSSSCEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecCC----ccEEEE-eCCEEEEEeecCCCCce
Confidence 44567889998887653 468888887765433 32211 236777 555555544 3456
Q ss_pred EEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEECCe--EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEE
Q 004785 174 VRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK--LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLL 251 (730)
Q Consensus 174 VrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~--I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Ll 251 (730)
|+.-++..........+.. ..|+++|+.|+..+++. |++.++...... .+.. ... ...++|++.+|+
T Consensus 131 Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~----~l~~--~~~-~~~~~P~g~~iy 199 (302)
T 3s25_A 131 LYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA----LFYD--CNC-YKPVVLDDTNVY 199 (302)
T ss_dssp EEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE----EEEC--SCE-EEEEEEETTEEE
T ss_pred EEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE----EEeC--CCc-cceeeecCCEEE
Confidence 7777777554444444432 45788999998887633 888888766532 2222 222 234669999887
Q ss_pred EEEeeCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCccc
Q 004785 252 LTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATR 331 (730)
Q Consensus 252 atgsvwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~ 331 (730)
.+..... ..|...+........|... . .+.|++++++|++..... ...+
T Consensus 200 ~t~~~~~---------------------~~I~~~~ldG~~~~~Lt~~------~--~~~~~~~g~~Iy~~~~~~--~~~i 248 (302)
T 3s25_A 200 YMDVNRD---------------------NAIVHVNINNPNPVVLTEA------N--IEHYNVYGSLIFYQRGGD--NPAL 248 (302)
T ss_dssp EEEGGGT---------------------TEEEEECSSSCCCEECSCS------C--EEEEEEETTEEEEEECSS--SCEE
T ss_pred EEEcCCC---------------------cEEEEEECCCCCeEEEeCC------C--cceEEECCCEEEEEECCC--CcEE
Confidence 7642110 1233333333222222111 1 256899999997654433 3678
Q ss_pred ceeecCCCcceeeec
Q 004785 332 TQQSLRSSSSVRLLT 346 (730)
Q Consensus 332 ~~~~~~ss~~~~l~~ 346 (730)
...+++++...+|..
T Consensus 249 ~~~~~DG~~r~~l~~ 263 (302)
T 3s25_A 249 CVVKNDGTGFKELAK 263 (302)
T ss_dssp EEEETTSCCCEEEEE
T ss_pred EEEECCCCccEEeeC
Confidence 888898888777754
No 293
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.86 E-value=0.06 Score=62.67 Aligned_cols=144 Identities=13% Similarity=0.055 Sum_probs=92.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC----C-CCCCeEEEEECC--CCCEEEEEeC------CCeEEEEECCCCeEEEEEec
Q 004785 81 RRGLASWVEAESLHHLRPKYCPLS----P-PPRSTIAAAFSP--DGKTLASTHG------DHTVKIIDCQTGSCLKVLHG 147 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~L~----g-H~~~Vt~lafSP--DG~~LaSgS~------DgtVrVWDl~tg~~l~~l~g 147 (730)
+..|+.+..|+.|..+|.+++++. . .......+..+| .+..++.+.. ++.|+.+|.++|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 456778888999999999887421 1 100000111112 1335555543 58999999999999887753
Q ss_pred CC-------------------------------CCcEEEEEccCCCCEEEEEeCCC-------------------cEEEE
Q 004785 148 HR-------------------------------RTPWVVRFHPLNPTIIASGSLDH-------------------EVRLW 177 (730)
Q Consensus 148 H~-------------------------------~~V~sVafSP~dg~lLaSgS~Dg-------------------tVrLW 177 (730)
.. .....+++.| ..++++.+..++ .|..+
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11 0112468888 667777777665 49999
Q ss_pred ECCCCeEEEEecCC----------CCeEEEEEcCCCC---EEEEEEC-CeEEEEEcCCCccc
Q 004785 178 NASTAECIGSRDFY----------RPIASIAFHASGE---LLAVASG-HKLYIWRYNMREET 225 (730)
Q Consensus 178 Dl~tg~~i~~l~h~----------~~V~sVafSPdG~---~LAsgSd-d~I~VWDl~t~~~~ 225 (730)
|..+|+.+..+... .+.....+..+|+ .|+.++. +.++++|..+++.+
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 99999998876521 2233333344675 5667764 45999999998864
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.78 E-value=0.014 Score=68.61 Aligned_cols=163 Identities=9% Similarity=-0.002 Sum_probs=99.9
Q ss_pred CCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEECCC----CeEEEEEecCCCCcEEEEEccC
Q 004785 89 EAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQT----GSCLKVLHGHRRTPWVVRFHPL 160 (730)
Q Consensus 89 ~DgsIrlWd~~t~~---L~gH~~~Vt~lafSPDG~~LaSgS-~DgtVrVWDl~t----g~~l~~l~gH~~~V~sVafSP~ 160 (730)
....|+..++.... +......+..++|++++..|+.+. ..+.|+.+++.. ......+.........|++.+.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 44567777776542 333344577899998776666553 467899999875 2222222222234567888864
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEecCCC
Q 004785 161 NPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRR 236 (730)
Q Consensus 161 dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~h~~ 236 (730)
+++++++-...+.|.++|+........+. .......++++|.+.+|+.+.. ++|+++++...... ......-.
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~---~l~~~~l~ 540 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTENIQ 540 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC---EESCSSCS
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee---EEEeCCCC
Confidence 66777776677889999987655444333 2245678999997776665542 44887777543221 11112234
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004785 237 SLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 237 ~V~sVaFSPdG~~Llatg 254 (730)
....|+|+|++.+|..+-
T Consensus 541 ~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp SCCCEEECTTTCCEEEEE
T ss_pred CccEEEEeccCCEEEEEe
Confidence 567899999877776654
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.68 E-value=0.28 Score=52.18 Aligned_cols=99 Identities=19% Similarity=0.214 Sum_probs=61.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE--EEEe---cCCCCcEEEEEccC---CCCEEEEEeCC-----CcEE
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL--KVLH---GHRRTPWVVRFHPL---NPTIIASGSLD-----HEVR 175 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l--~~l~---gH~~~V~sVafSP~---dg~lLaSgS~D-----gtVr 175 (730)
....++|.|||++++ +..++.|++++ +++.. ..+. ........|+|+|+ ++.++++-..+ ..|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 467999999998555 45679999998 45422 1111 12345789999993 35555554433 6788
Q ss_pred EEECCCCeE-----EEE-ecC----CCCeEEEEEcCCCCEEEEEE
Q 004785 176 LWNASTAEC-----IGS-RDF----YRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 176 LWDl~tg~~-----i~~-l~h----~~~V~sVafSPdG~~LAsgS 210 (730)
.|+...++. +.. +.. ......++|.|||.+.++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 888775421 111 221 12346899999997555543
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.61 E-value=0.14 Score=56.46 Aligned_cols=144 Identities=13% Similarity=0.068 Sum_probs=84.4
Q ss_pred CCeEEEEECCC--CCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCC---Cc-EEEEECCC
Q 004785 108 RSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD---HE-VRLWNAST 181 (730)
Q Consensus 108 ~~Vt~lafSPD--G~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~D---gt-VrLWDl~t 181 (730)
.....++|+|+ +..|+.+...+.|+.+|..+++.... .........++|++ +++++++.... .. +...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCC
Confidence 45679999995 45565554448999999988875544 34455688999999 77765554321 12 33333222
Q ss_pred CeE-EEEecCCCCeEEEEEcC-CCCEEEEEE-CCeEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 182 AEC-IGSRDFYRPIASIAFHA-SGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 182 g~~-i~~l~h~~~V~sVafSP-dG~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
+.. ...+........++++| +|.+.++-. ++.|+.+|..++..... .........-..++|+|+|++|..+.
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~-~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEE-EVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEE-EEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEE-EeccCCCCCcccEEEeCCCCEEEEEe
Confidence 111 01222234456789999 555443333 34599999876653110 11112223345799999999666654
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.45 E-value=0.28 Score=52.43 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=62.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe-EEEEEe---cCCCCcEEEEEccC---CCCEEEEEeC---C----Cc
Q 004785 108 RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-CLKVLH---GHRRTPWVVRFHPL---NPTIIASGSL---D----HE 173 (730)
Q Consensus 108 ~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~-~l~~l~---gH~~~V~sVafSP~---dg~lLaSgS~---D----gt 173 (730)
.....++|.|||++++ +..++.|+++| .+++ .+..+. ........|+|+|+ ++.++++-+. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3467999999998555 45669999997 4565 222211 12345789999994 3566555442 3 56
Q ss_pred EEEEECCCC--e---E--E-EEec--CCCCeEEEEEcCCCCEEEEEE
Q 004785 174 VRLWNASTA--E---C--I-GSRD--FYRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 174 VrLWDl~tg--~---~--i-~~l~--h~~~V~sVafSPdG~~LAsgS 210 (730)
|..|+...+ . . + ..+. .......++|.|||++.++.+
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 888887654 1 1 1 1122 122346799999998666543
No 298
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.42 E-value=0.43 Score=52.94 Aligned_cols=102 Identities=14% Similarity=0.183 Sum_probs=62.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE--EEec------CCCCcEEEEEccC---CCCEEEEEeC-------
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK--VLHG------HRRTPWVVRFHPL---NPTIIASGSL------- 170 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~--~l~g------H~~~V~sVafSP~---dg~lLaSgS~------- 170 (730)
....|+|.|||+++++-...+.|++++..+++... .+.. ..+....|+|+|+ ++.++++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 46799999999877765444579888876665322 2221 1345678999994 4555555432
Q ss_pred -----CCcEEEEECCCC--e-----EEEE-ec--CCCCeEEEEEcCCCCEEEEEE
Q 004785 171 -----DHEVRLWNASTA--E-----CIGS-RD--FYRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 171 -----DgtVrLWDl~tg--~-----~i~~-l~--h~~~V~sVafSPdG~~LAsgS 210 (730)
...|..|++..+ + .+.. +. ..+....++|.|||++.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665432 1 1111 22 234578999999999666554
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.34 E-value=0.49 Score=51.09 Aligned_cols=129 Identities=14% Similarity=0.141 Sum_probs=89.6
Q ss_pred CCeEEEEeC--CCCCCC---C------CC-CCeEEEEE--CCC-CC-EEEEEeCCCeEEEEECC-------CCeEEEEEe
Q 004785 90 AESLHHLRP--KYCPLS---P------PP-RSTIAAAF--SPD-GK-TLASTHGDHTVKIIDCQ-------TGSCLKVLH 146 (730)
Q Consensus 90 DgsIrlWd~--~t~~L~---g------H~-~~Vt~laf--SPD-G~-~LaSgS~DgtVrVWDl~-------tg~~l~~l~ 146 (730)
+++|.+|++ .++++. . .. ..+..+++ +++ ++ ++++...++.+..|++. +++.++.|.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 578999955 444321 1 11 45667777 774 54 57777889999999882 345677776
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECC-----CCeEEEEecC---CCCeEEEEE--cCCCC-EEEEEE--CCe
Q 004785 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-----TAECIGSRDF---YRPIASIAF--HASGE-LLAVAS--GHK 213 (730)
Q Consensus 147 gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~-----tg~~i~~l~h---~~~V~sVaf--SPdG~-~LAsgS--dd~ 213 (730)
.. ..+..+...+ ....|+.+-.|.-|..+|.. +++.+..+.. ...+..+++ .++|+ +|++++ ++.
T Consensus 178 lg-sq~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 178 MN-SQTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp CS-SCEEEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred CC-CCcceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 44 4688889988 77888888888777777755 3556655542 257888888 56777 777777 456
Q ss_pred EEEEEcC
Q 004785 214 LYIWRYN 220 (730)
Q Consensus 214 I~VWDl~ 220 (730)
..|||..
T Consensus 256 ~~Vydr~ 262 (355)
T 3amr_A 256 YAIYDRQ 262 (355)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999986
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.23 E-value=1.8 Score=50.00 Aligned_cols=168 Identities=7% Similarity=-0.074 Sum_probs=106.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 81 RRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~----L~gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
+...++-..++.|..++..... +.........+++...+..|+.+ ...+.|.+.++........+.........|
T Consensus 49 ~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~i 128 (628)
T 4a0p_A 49 NRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRAL 128 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccE
Confidence 3444455567778777765431 11122356788998766655544 456889999986554333333445567899
Q ss_pred EEccCCCCEEEEE-eCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeEEe
Q 004785 156 RFHPLNPTIIASG-SLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRIVL 232 (730)
Q Consensus 156 afSP~dg~lLaSg-S~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t~~~~~~~~~l~ 232 (730)
+++|.++.++.+- +..+.|...++...........-...+.++++++++.|+.+.. +.|..+|+..... ..+.
T Consensus 129 avdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~----~v~~ 204 (628)
T 4a0p_A 129 ALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR----EVIA 204 (628)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEE
T ss_pred EEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce----EEee
Confidence 9999556555553 2356788888875544444445567889999999998888874 4599999876433 1333
Q ss_pred cCCCCeEEEEEccCCCeEEEEE
Q 004785 233 RTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 233 ~h~~~V~sVaFSPdG~~Llatg 254 (730)
........+++.. .++..+.
T Consensus 205 ~~l~~P~glav~~--~~ly~tD 224 (628)
T 4a0p_A 205 DDLPHPFGLTQYQ--DYIYWTD 224 (628)
T ss_dssp ECCSCEEEEEEET--TEEEEEE
T ss_pred ccCCCceEEEEEC--CEEEEec
Confidence 3444566788764 3455543
No 301
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.16 E-value=0.36 Score=51.44 Aligned_cols=143 Identities=17% Similarity=0.049 Sum_probs=78.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe-------cCCCCcEEEEEccC---CCCEEEEEeC-------C
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH-------GHRRTPWVVRFHPL---NPTIIASGSL-------D 171 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~-------gH~~~V~sVafSP~---dg~lLaSgS~-------D 171 (730)
....|+|.|||+.|+.+...+.|++++. .++....+. ...+....|+|+|+ ++.++++-.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3679999999984445567799999985 343221111 12334688999994 4555555333 2
Q ss_pred CcEEEEECCCC--e---EEEE---ec----CCCCeEEEEEcCCCCEEEEEEC--------------CeEEEEEcCCCccc
Q 004785 172 HEVRLWNASTA--E---CIGS---RD----FYRPIASIAFHASGELLAVASG--------------HKLYIWRYNMREET 225 (730)
Q Consensus 172 gtVrLWDl~tg--~---~i~~---l~----h~~~V~sVafSPdG~~LAsgSd--------------d~I~VWDl~t~~~~ 225 (730)
..|..|++..+ + .... +. .......++|.|||.+.++.++ ++|.-+|....-..
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35777776543 1 1111 11 1123467999999965554433 24555565432000
Q ss_pred ---------cCCeEEecCCCCeEEEEEcc-CCCeEEEE
Q 004785 226 ---------SSPRIVLRTRRSLRAVHFHP-HAAPLLLT 253 (730)
Q Consensus 226 ---------~~~~~l~~h~~~V~sVaFSP-dG~~Llat 253 (730)
.........-.....++|+| +|+ |.++
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~-l~~~ 214 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNA-LWLN 214 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTE-EEEE
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCC-EEEE
Confidence 00112222234578999999 565 4443
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.07 E-value=3.3 Score=47.65 Aligned_cols=163 Identities=7% Similarity=-0.050 Sum_probs=105.3
Q ss_pred eCCCeEEEEeCCCCCC-----C-CCCCCeEEEEECCCCCEEEEE-eCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccC
Q 004785 88 VEAESLHHLRPKYCPL-----S-PPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPL 160 (730)
Q Consensus 88 s~DgsIrlWd~~t~~L-----~-gH~~~Vt~lafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~ 160 (730)
+..+.|+..++..... . ..-..+.+++|++.+..|+.+ ...+.|+.++.........+......+..+++.+.
T Consensus 323 ~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~ 402 (619)
T 3s94_A 323 ARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWV 402 (619)
T ss_dssp EESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT
T ss_pred EcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecc
Confidence 3456677777765421 1 223457899999855555544 45788999998765444444444456788999875
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEEecCCC
Q 004785 161 NPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRR 236 (730)
Q Consensus 161 dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSd---d~I~VWDl~t~~~~~~~~~l~~h~~ 236 (730)
+++++.+-...+.|.+.++.......... .-.....++++|...+|+.... .+|...+++..... ......-.
T Consensus 403 ~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~---~l~~~~l~ 479 (619)
T 3s94_A 403 ARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV---VLVNTSLG 479 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCS
T ss_pred cCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE---EEEeCCCC
Confidence 67777777778899999987554322232 3356789999998666666552 34766666543321 12223345
Q ss_pred CeEEEEEccCCCeEEEE
Q 004785 237 SLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 237 ~V~sVaFSPdG~~Llat 253 (730)
....|++++++..|..+
T Consensus 480 ~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 480 WPNGLALDYDEGKIYWG 496 (619)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CCeeeEEcccCCEEEEE
Confidence 77899999977767665
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.94 E-value=0.75 Score=49.41 Aligned_cols=142 Identities=15% Similarity=0.128 Sum_probs=82.0
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE--EE----ecCCCCcEEEEEccC---CCCEEEEE--eCCCcEEE
Q 004785 108 RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK--VL----HGHRRTPWVVRFHPL---NPTIIASG--SLDHEVRL 176 (730)
Q Consensus 108 ~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~--~l----~gH~~~V~sVafSP~---dg~lLaSg--S~DgtVrL 176 (730)
.....|+|.|||+++++--..+.|++++..+++... .+ ....+....|+|+|+ ++.++++- ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 356799999999977776558999999876665422 12 122345788999993 35555542 24456666
Q ss_pred EECCCC----------eEEE-Eec--CCCCeEEEEEcCCCCEEEEEEC--------------CeEEEEEcCCCccc----
Q 004785 177 WNASTA----------ECIG-SRD--FYRPIASIAFHASGELLAVASG--------------HKLYIWRYNMREET---- 225 (730)
Q Consensus 177 WDl~tg----------~~i~-~l~--h~~~V~sVafSPdG~~LAsgSd--------------d~I~VWDl~t~~~~---- 225 (730)
|.+..+ +.+. .+. ..+....+.|.|||.+.++.++ ++|.-.+....-..
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 766541 1111 122 2234567999999986666442 22433343322000
Q ss_pred -cCCeEEecCCCCeEEEEEccCCCeE
Q 004785 226 -SSPRIVLRTRRSLRAVHFHPHAAPL 250 (730)
Q Consensus 226 -~~~~~l~~h~~~V~sVaFSPdG~~L 250 (730)
.......+| .....++|+|+|..+
T Consensus 192 ~~~~i~a~G~-RNp~Gla~dp~G~L~ 216 (347)
T 3das_A 192 PGSPVYSYGH-RNVQGLAWDDKQRLF 216 (347)
T ss_dssp TTCCEEEBCC-SBCCEEEECTTCCEE
T ss_pred CCCeEEeeCC-CCcceEEECCCCCEE
Confidence 011223334 456789999998733
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.79 E-value=0.9 Score=47.49 Aligned_cols=143 Identities=15% Similarity=0.114 Sum_probs=83.9
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE-ecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEEC--CCC
Q 004785 106 PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL-HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA--STA 182 (730)
Q Consensus 106 H~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l-~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl--~tg 182 (730)
+.+.+..+.+.+++..++.+ .++.|.. ....|+.-..+ ..+...+..+.+.+ ++.+++.+...+..+-+|- .+-
T Consensus 120 ~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 120 LPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECT-TSCEEEEETTSSEEEEECTTCSSC
T ss_pred CCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCCCCce
Confidence 44568888888777766655 4555433 22335443333 34556788999998 7777766654443444453 233
Q ss_pred eEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEE-ecCCCCeEEEEEccCCCeEEE
Q 004785 183 ECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIV-LRTRRSLRAVHFHPHAAPLLL 252 (730)
Q Consensus 183 ~~i~~l~h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~~~~~l-~~h~~~V~sVaFSPdG~~Lla 252 (730)
+.+ .......+..+.+.+++++++++.++.+++++.+.++.-.....- ......+..+.|.+++..+++
T Consensus 197 ~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 266 (327)
T 2xbg_A 197 EPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLA 266 (327)
T ss_dssp EEE-ECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEE
T ss_pred eEC-CCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEE
Confidence 333 233456788999999998877776666777642222211100000 112345889999988775444
No 305
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.65 E-value=1.2 Score=49.37 Aligned_cols=137 Identities=13% Similarity=0.116 Sum_probs=88.8
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC----CCCC----CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCe---------
Q 004785 78 RDARRGLASWVEAESLHHLRPKYC----PLSP----PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS--------- 140 (730)
Q Consensus 78 ~d~g~~L~Sgs~DgsIrlWd~~t~----~L~g----H~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~--------- 140 (730)
..++..++.+. ++.||.-++... .+.- .-..|..+..||+|++||..+ +..|.|-.+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 34555565543 467777665522 1211 123578899999999999885 4588888886321
Q ss_pred ---EEEEEec------CCCCcEEEEEccCC--CCEEEEEeCCCcEEEEECCCC--eEEEEe-------c---CCCCeEEE
Q 004785 141 ---CLKVLHG------HRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTA--ECIGSR-------D---FYRPIASI 197 (730)
Q Consensus 141 ---~l~~l~g------H~~~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~tg--~~i~~l-------~---h~~~V~sV 197 (730)
..+.+.- ....|..+.|||.. +..|++-..|++|++||+... ++. .+ + ....|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 1233332 24679999999953 347888899999999999862 222 22 1 22578899
Q ss_pred EEcCCCCEEEEEE--CCe-EEEE
Q 004785 198 AFHASGELLAVAS--GHK-LYIW 217 (730)
Q Consensus 198 afSPdG~~LAsgS--dd~-I~VW 217 (730)
+|..+|-.|+..+ .++ |+-.
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEEE
Confidence 9999887777655 333 6543
No 306
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.40 E-value=0.19 Score=58.03 Aligned_cols=111 Identities=19% Similarity=0.196 Sum_probs=77.1
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEECCCCeE--EEEEec-CCCCcEEEEEccCCCCEEEEEeC-CCcEE
Q 004785 112 AAAFSP-DGKTLASTHGDH-----------TVKIIDCQTGSC--LKVLHG-HRRTPWVVRFHPLNPTIIASGSL-DHEVR 175 (730)
Q Consensus 112 ~lafSP-DG~~LaSgS~Dg-----------tVrVWDl~tg~~--l~~l~g-H~~~V~sVafSP~dg~lLaSgS~-DgtVr 175 (730)
.+++.+ +|++++.|+.+. .+.+||..+++- +..+.. +.....++++.. ++++++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCceE
Confidence 566777 888888887643 689999988752 233322 333344577777 8899999884 56899
Q ss_pred EEECCCCeEEEEe--cCCCCeEEEEEcCCCCEEEEEE-C------CeEEEEEcCCCc
Q 004785 176 LWNASTAECIGSR--DFYRPIASIAFHASGELLAVAS-G------HKLYIWRYNMRE 223 (730)
Q Consensus 176 LWDl~tg~~i~~l--~h~~~V~sVafSPdG~~LAsgS-d------d~I~VWDl~t~~ 223 (730)
+||..+++....- .....-.+++..++|++++.|+ . ..+.+||..+.+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 9999887655442 2333345667778999998887 2 239999998764
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.01 E-value=0.083 Score=61.93 Aligned_cols=138 Identities=9% Similarity=-0.038 Sum_probs=83.3
Q ss_pred EEEeCCCeEEEEeCCC----C---CC-CCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEEEEEecCCCCcEEE
Q 004785 85 ASWVEAESLHHLRPKY----C---PL-SPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (730)
Q Consensus 85 ~Sgs~DgsIrlWd~~t----~---~L-~gH~~~Vt~lafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sV 155 (730)
++-...+.|+.+++.. . .+ .........|++.+.+..| ++-...+.|.++++........+.........|
T Consensus 422 ~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~gi 501 (699)
T 1n7d_A 422 WSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAI 501 (699)
T ss_dssp ECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCE
T ss_pred EEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceE
Confidence 3334566788888764 1 11 1122335678888654444 444557889999987554433333333557789
Q ss_pred EEccCCCCEEEEEeCC-CcEEEEECCCCeEEEEe-cCCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCC
Q 004785 156 RFHPLNPTIIASGSLD-HEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG--HKLYIWRYNMR 222 (730)
Q Consensus 156 afSP~dg~lLaSgS~D-gtVrLWDl~tg~~i~~l-~h~~~V~sVafSPdG~~LAsgSd--d~I~VWDl~t~ 222 (730)
+++|.++.++++-... +.|.++++......... ..-...+.|+|+|++..|+.+.. +.|.++|+...
T Consensus 502 avDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 502 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp ECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred EEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 9999556666554333 67888887543222222 12245678999999887777763 45999998653
No 308
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.83 E-value=1.3 Score=46.31 Aligned_cols=180 Identities=8% Similarity=0.049 Sum_probs=99.8
Q ss_pred CCCCEEEEEe--CCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe-CC-------------CcEEEEECC
Q 004785 117 PDGKTLASTH--GDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS-LD-------------HEVRLWNAS 180 (730)
Q Consensus 117 PDG~~LaSgS--~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS-~D-------------gtVrLWDl~ 180 (730)
.+|.+|+... +++.|+..+..... ...+.... +--+++ +++.|+.+. .+ ..|+..++.
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~~----~~~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSNDT----AMYINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEEE----EEEEEE-CSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCCc----eeeEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 4677776664 25667777764433 34443221 234577 555555443 33 468888888
Q ss_pred CCeEEEEecCCCCeEEEEEcCCCCEEEEEE---CCe--EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 181 TAECIGSRDFYRPIASIAFHASGELLAVAS---GHK--LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 181 tg~~i~~l~h~~~V~sVafSPdG~~LAsgS---dd~--I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
.++........ ...|+++|++|+... ++. |+..++..... ..+..+.. ..|+++|+.|..+..
T Consensus 97 g~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~----~~lt~~~~----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 97 GHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK----KKIKNHYL----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp SCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC----EEEESSCC----CCSEEETTEEEEECT
T ss_pred CCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe----EEEeCCCc----eEeeEECCEEEEEeC
Confidence 76644443322 236788999998876 333 77777664432 23444432 457888988876643
Q ss_pred eCCccCCCcceeEeccCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceee
Q 004785 256 VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQS 335 (730)
Q Consensus 256 vwdl~s~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~ 335 (730)
+. +.|...++.......+... +...| +.|++++|++.... .+..++.++
T Consensus 165 ------g~----------------~~Iy~~~l~g~~~~~l~~~------~~~~~-~~P~g~~iy~t~~~--~~~~I~~~~ 213 (302)
T 3s25_A 165 ------KN----------------GQLYRYDTASQSEALFYDC------NCYKP-VVLDDTNVYYMDVN--RDNAIVHVN 213 (302)
T ss_dssp ------TT----------------CCEEEEETTTTEEEEEECS------CEEEE-EEEETTEEEEEEGG--GTTEEEEEC
T ss_pred ------CC----------------ceEEEEECCCCCEEEEeCC------Cccce-eeecCCEEEEEEcC--CCcEEEEEE
Confidence 11 1222222222111111111 11223 56899999885433 236788899
Q ss_pred cCCCcceeee
Q 004785 336 LRSSSSVRLL 345 (730)
Q Consensus 336 ~~ss~~~~l~ 345 (730)
++++..++|+
T Consensus 214 ldG~~~~~Lt 223 (302)
T 3s25_A 214 INNPNPVVLT 223 (302)
T ss_dssp SSSCCCEECS
T ss_pred CCCCCeEEEe
Confidence 9888877664
No 309
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.75 E-value=0.76 Score=52.90 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=66.6
Q ss_pred CCEEEEEeC-CCeEEEEeC-CCCCC------CCCC---------CCeEEEEECCCCCE----EEEEeCCCeEEEEECCCC
Q 004785 81 RRGLASWVE-AESLHHLRP-KYCPL------SPPP---------RSTIAAAFSPDGKT----LASTHGDHTVKIIDCQTG 139 (730)
Q Consensus 81 g~~L~Sgs~-DgsIrlWd~-~t~~L------~gH~---------~~Vt~lafSPDG~~----LaSgS~DgtVrVWDl~tg 139 (730)
+..|+.+.. ++.|.-+|. ++++. .... .....++++|.+.. |+.++.|+.|.-+|.++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 345666666 777888888 66631 1110 00123455444444 888889999999999999
Q ss_pred eEEEEEecCCC----CcE-EEEEccCCCCEEEEEe------CCCcEEEEECCCCeEEEEecC
Q 004785 140 SCLKVLHGHRR----TPW-VVRFHPLNPTIIASGS------LDHEVRLWNASTAECIGSRDF 190 (730)
Q Consensus 140 ~~l~~l~gH~~----~V~-sVafSP~dg~lLaSgS------~DgtVrLWDl~tg~~i~~l~h 190 (730)
+.+...+.... .+. ...+. ++. ++.++ .++.|+-+|.++|+.+..+..
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~--~g~-V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV--KDK-VIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE--TTE-EEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEeecCCCCCccceeecCCEEE--CCE-EEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 98877653220 121 11221 344 44444 489999999999999887653
No 310
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.15 E-value=11 Score=43.59 Aligned_cols=166 Identities=10% Similarity=0.006 Sum_probs=104.1
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCCCCCC----CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe-----c
Q 004785 77 GRDARRGLASWVEAESLHHLRPKYCPLSP----PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH-----G 147 (730)
Q Consensus 77 ~~d~g~~L~Sgs~DgsIrlWd~~t~~L~g----H~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~-----g 147 (730)
..+....|+.+..+| +..||..+.++.. ....|.++.. .+| .|..++.+ -|..+|..+++. ..+. .
T Consensus 69 ~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~-~~~~~~~~~l 143 (758)
T 3ott_A 69 VIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL-TSFDTRRNGL 143 (758)
T ss_dssp EEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE-EEECHHHHCC
T ss_pred EEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE-EEeccCCCCc
Confidence 345677899888765 7789987764432 2335777754 355 45556665 688889877654 3331 1
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cC-----CCCeEEEEEcCCCCEEEEEECCeEEEEEcCC
Q 004785 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DF-----YRPIASIAFHASGELLAVASGHKLYIWRYNM 221 (730)
Q Consensus 148 H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l-~h-----~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t 221 (730)
....|.++.... ++.+.+ +..+ -|..+|..+++..... .. ...|.++..+.++..|.+|+++++..+|..+
T Consensus 144 ~~~~i~~i~~d~-~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~ 220 (758)
T 3ott_A 144 PNNTIYSIIRTK-DNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPST 220 (758)
T ss_dssp SCSCEEEEEECT-TCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTT
T ss_pred CCCeEEEEEEcC-CCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCC
Confidence 134577777776 666655 3444 5888998876643321 11 2248888888888766667766799999876
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004785 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llat 253 (730)
.+... ...+ ....|.++....+|...+.+
T Consensus 221 ~~~~~-~~~l--~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 221 GQIKQ-TEAF--HNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp TEEEE-EEEE--EEEEEEEEEECTTCCEEEEE
T ss_pred CeEEe-ccCC--CCCeEEEEEEcCCCCEEEEe
Confidence 54321 1111 23458888888888866655
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.12 E-value=0.53 Score=47.82 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=82.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeE------EEEEe--cCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECC
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC------LKVLH--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS 180 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~------l~~l~--gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~ 180 (730)
.+.+++|+|||.+.++ .++.++-.+..+... -..+- +-.. ...+.|.| ++.+.++ .||.|+-++-.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~-~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDP-NGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECT-TSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECC-CCCEEEe--CCCEEEEeCCC
Confidence 6779999999986666 677777777644211 12221 1122 56899999 8888887 56999888864
Q ss_pred CCeEEE------Eec--CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCcc---ccCCeEEe-cCCCCeEEEEEccCCC
Q 004785 181 TAECIG------SRD--FYRPIASIAFHASGELLAVASGHKLYIWRYNMREE---TSSPRIVL-RTRRSLRAVHFHPHAA 248 (730)
Q Consensus 181 tg~~i~------~l~--h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~---~~~~~~l~-~h~~~V~sVaFSPdG~ 248 (730)
+..... .+. .-..+..|.|+|+|.+.++. ++.++-+...+... ......+. ..-..-+.+.|.++|.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 421111 111 12467999999999998888 77765443332211 00011222 2222345567999998
Q ss_pred eEEEE
Q 004785 249 PLLLT 253 (730)
Q Consensus 249 ~Llat 253 (730)
.+.+.
T Consensus 195 l~~v~ 199 (236)
T 1tl2_A 195 LFGVQ 199 (236)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55544
No 312
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.97 E-value=4.4 Score=44.90 Aligned_cols=130 Identities=13% Similarity=0.152 Sum_probs=81.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEEecC----CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCe----------
Q 004785 118 DGKTLASTHGDHTVKIIDCQTGSCLKVLHGH----RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAE---------- 183 (730)
Q Consensus 118 DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH----~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~---------- 183 (730)
+|..|+.+ .++.||.-++..+...+.++.. -..|..+..+| ++++++..+ +.+|.|-.+..+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 55555555 3467777777644444444432 23588899999 999888865 4579998887332
Q ss_pred --EEEEec-------CCCCeEEEEEcCCC---CEEEEEE-CCeEEEEEcCCCccccCCeEEe---------cCCCCeEEE
Q 004785 184 --CIGSRD-------FYRPIASIAFHASG---ELLAVAS-GHKLYIWRYNMREETSSPRIVL---------RTRRSLRAV 241 (730)
Q Consensus 184 --~i~~l~-------h~~~V~sVafSPdG---~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~---------~h~~~V~sV 241 (730)
..+.+. ...+|..+.|||-| ..|++-. |+.|++||+..... .+..+. .....|.++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~--~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQE--KPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTS--CCEEESCCCSEEESCSSCCCEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCC--CCcchhccccccCCCcccceEEEE
Confidence 111221 24679999999965 4666666 55699999987432 122111 112567888
Q ss_pred EEccCCCeEEE
Q 004785 242 HFHPHAAPLLL 252 (730)
Q Consensus 242 aFSPdG~~Lla 252 (730)
+|..++-.|.+
T Consensus 186 ~Fg~~~lTLYv 196 (452)
T 3pbp_A 186 EFSKDGLTLYC 196 (452)
T ss_dssp EECTTSSCEEE
T ss_pred EEcCCCcEEEE
Confidence 88887655544
No 313
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.59 E-value=0.6 Score=47.43 Aligned_cols=130 Identities=14% Similarity=0.103 Sum_probs=77.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCe------EEEEEec-CCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEE------
Q 004785 119 GKTLASTHGDHTVKIIDCQTGS------CLKVLHG-HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI------ 185 (730)
Q Consensus 119 G~~LaSgS~DgtVrVWDl~tg~------~l~~l~g-H~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i------ 185 (730)
..+|+...+| +|+.=...++. ....+-. --..+..++|+| ++.+.+. .++.++-.+..+....
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 3456666666 66655444433 1223321 134678999999 8887777 6777777776552211
Q ss_pred EEecC--CCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCcccc---CCeEEecCC-CCeEEEEEccCCCeEEEE
Q 004785 186 GSRDF--YRPIASIAFHASGELLAVASGHKLYIWRYNMREETS---SPRIVLRTR-RSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 186 ~~l~h--~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~~---~~~~l~~h~-~~V~sVaFSPdG~~Llat 253 (730)
..++. -....++.|+|+|.+.++ +++.|+-++-.+..... .-.++..+. ..+..|.|.|+|...+++
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred cEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 11211 112578999999998888 88888877754332211 011222211 367899999999966555
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.58 E-value=7.4 Score=41.78 Aligned_cols=120 Identities=14% Similarity=0.153 Sum_probs=86.4
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEE
Q 004785 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (730)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LA 207 (730)
+..|.|.|+.++.....-.- .-.+.-.+| ..++++--. ..++.++|+.+.+.++.+.....|.--.|-. .+.|+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP-~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis-~~~L~ 121 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPI---SADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVA 121 (365)
T ss_dssp EEEEEEEETTSTTSCEEEEC---CCSEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECS-SSEEE
T ss_pred CCEEEEEECCCCCCcccccc---ccceeeeCC-CccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecC-CCeEE
Confidence 34788889988654322111 122456789 777777655 6789999999999999998888998888864 46788
Q ss_pred EEECCeEEEEEcCCCccccCCeEEecC----CCCeEEEEEccCCCeEEEEEe
Q 004785 208 VASGHKLYIWRYNMREETSSPRIVLRT----RRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 208 sgSdd~I~VWDl~t~~~~~~~~~l~~h----~~~V~sVaFSPdG~~Llatgs 255 (730)
..++..|+-|++..... ....+..| ...|..-..+++.++++..|-
T Consensus 122 lVT~taVyHWs~~~~s~--P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 122 LVTDNAVYHWSMEGESQ--PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp EEESSEEEEEESSTTCC--CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred EEcCCcEEEEcccCCCC--CceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 88888999999976332 11233333 457888888999999887664
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=91.48 E-value=2.1 Score=45.30 Aligned_cols=107 Identities=13% Similarity=0.171 Sum_probs=63.8
Q ss_pred EEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE--ec----CCCCeEEEEEcCC---CCEEEEEEC---
Q 004785 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--RD----FYRPIASIAFHAS---GELLAVASG--- 211 (730)
Q Consensus 144 ~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~--l~----h~~~V~sVafSPd---G~~LAsgSd--- 211 (730)
.+...-...+.++|.| +++++++ ..++.|++++ +++.... +. .......++|+|+ +..|+++..
T Consensus 25 ~va~~l~~P~~ia~~p-dG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~ 100 (352)
T 2ism_A 25 EVVGGLEVPWALAFLP-DGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE 100 (352)
T ss_dssp EEECCCSCEEEEEECT-TSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT
T ss_pred EEECCCCCceEEEEcC-CCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC
Confidence 3333344578999999 7776555 5679999998 4543221 11 2356889999998 666655542
Q ss_pred ----CeEEEEEcCCCccccCCeE---Ee---cCCCCeEEEEEccCCCeEEEEE
Q 004785 212 ----HKLYIWRYNMREETSSPRI---VL---RTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 212 ----d~I~VWDl~t~~~~~~~~~---l~---~h~~~V~sVaFSPdG~~Llatg 254 (730)
+.|..|+............ +. ........++|.|||..+++.+
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 4588888764321110011 11 1112346899999997555544
No 316
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.65 E-value=2.6 Score=45.25 Aligned_cols=113 Identities=14% Similarity=0.190 Sum_probs=68.8
Q ss_pred EEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE--e-----cCCCCeEEEEEcCC---CCEEEEE-E
Q 004785 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--R-----DFYRPIASIAFHAS---GELLAVA-S 210 (730)
Q Consensus 142 l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~--l-----~h~~~V~sVafSPd---G~~LAsg-S 210 (730)
+..+...-...+.|+|.| ++.++++--..|.|++++..+++.... + ........|+|+|+ +.+|++. +
T Consensus 24 ~~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 444544456688999999 888777765589999998766654322 2 12456789999996 4445443 2
Q ss_pred ---CCeEEEEEcCCCc----cccCCeEEe-----cCCCCeEEEEEccCCCeEEEEEe
Q 004785 211 ---GHKLYIWRYNMRE----ETSSPRIVL-----RTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 211 ---dd~I~VWDl~t~~----~~~~~~~l~-----~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+++|.-|.+.... .......+. .....-..|.|.|||..+++.+.
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 3446667665421 111111111 11123457999999986666654
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.18 E-value=12 Score=40.10 Aligned_cols=142 Identities=10% Similarity=0.143 Sum_probs=79.6
Q ss_pred eEEEEECCCCCEEEEE------------eCCCeEEEEECCC--CeEE-EEEec-----CCCCcEEEEEccC-CCC--EEE
Q 004785 110 TIAAAFSPDGKTLAST------------HGDHTVKIIDCQT--GSCL-KVLHG-----HRRTPWVVRFHPL-NPT--IIA 166 (730)
Q Consensus 110 Vt~lafSPDG~~LaSg------------S~DgtVrVWDl~t--g~~l-~~l~g-----H~~~V~sVafSP~-dg~--lLa 166 (730)
.-++...++|..++++ ..+|.|.++|..+ ++.. ..+.+ .......+.+.++ ++. +++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3455566665444443 1688999999873 3321 12232 2345677887662 232 444
Q ss_pred EEeC--CCcEEEEECCCC--eEE--EEecC--CCCeEEEEEcCCCCEEEEEE----C------------CeEEEEEcCCC
Q 004785 167 SGSL--DHEVRLWNASTA--ECI--GSRDF--YRPIASIAFHASGELLAVAS----G------------HKLYIWRYNMR 222 (730)
Q Consensus 167 SgS~--DgtVrLWDl~tg--~~i--~~l~h--~~~V~sVafSPdG~~LAsgS----d------------d~I~VWDl~t~ 222 (730)
.-.. +.+|.+|++..+ ... ..+.+ -...+.+.+.++|.+.++.. + ..=+||.+..+
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 4333 567778776543 222 22332 24678999999999777654 1 11234433333
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004785 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatgs 255 (730)
+ ...+...-...+.++|+||++++..+..
T Consensus 212 ~----~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 212 D----VRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp C----CEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred e----EEEeecCCcccCcceECCCCCEEEEEeC
Confidence 2 2233344456789999999998777653
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.15 E-value=3 Score=44.29 Aligned_cols=110 Identities=10% Similarity=0.125 Sum_probs=63.8
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCe-EEEEec----CCCCeEEEEEcCC---CCEEEEEE-C--
Q 004785 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAE-CIGSRD----FYRPIASIAFHAS---GELLAVAS-G-- 211 (730)
Q Consensus 143 ~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~-~i~~l~----h~~~V~sVafSPd---G~~LAsgS-d-- 211 (730)
..+...-...+.|+|.| +++++++ ..++.|+++| .+++ .+..+. .......++|+|+ +..|+++. .
T Consensus 22 ~~va~~l~~P~~ia~~p-dG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLG-GGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp EEEECSCSCEEEEEEEE-TTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred EEEeCCCCCCeEEEEcC-CCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 33333345678999999 7775554 6669999997 4555 222211 2356889999998 55555443 2
Q ss_pred ------CeEEEEEcCCCc-cccCCeE----Eec-CCCCeEEEEEccCCCeEEEEEe
Q 004785 212 ------HKLYIWRYNMRE-ETSSPRI----VLR-TRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 212 ------d~I~VWDl~t~~-~~~~~~~----l~~-h~~~V~sVaFSPdG~~Llatgs 255 (730)
+.|..|+..... ....... +.. .......+.|.|||..+++.+.
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 447778776541 0000111 111 1123467999999985555443
No 319
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.50 E-value=4.2 Score=44.94 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=65.8
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEE--ec-------CCCCeEEEEEcCC---CCEEEEEE
Q 004785 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--RD-------FYRPIASIAFHAS---GELLAVAS 210 (730)
Q Consensus 143 ~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~--l~-------h~~~V~sVafSPd---G~~LAsgS 210 (730)
..+...-...+.|+|.| +++++++-...+.|++++..+++.... +. .......|+|+|+ +..|++..
T Consensus 20 ~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 20 KVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 33433344678999999 888777654445799998766654322 21 2356779999996 55555543
Q ss_pred C--------------CeEEEEEcCCCc-cccCCeEEe---c--CCCCeEEEEEccCCCeEEEEEe
Q 004785 211 G--------------HKLYIWRYNMRE-ETSSPRIVL---R--TRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 211 d--------------d~I~VWDl~t~~-~~~~~~~l~---~--h~~~V~sVaFSPdG~~Llatgs 255 (730)
. ..|.-|++.... .+.....+. . .......|.|.|||..+++.+.
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1 236666654321 111011111 1 1234689999999986666654
No 320
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.89 E-value=13 Score=37.55 Aligned_cols=139 Identities=15% Similarity=0.095 Sum_probs=74.9
Q ss_pred CCCEEEEEeCC----CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC------CeEEEEECCCCeEEE
Q 004785 80 ARRGLASWVEA----ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD------HTVKIIDCQTGSCLK 143 (730)
Q Consensus 80 ~g~~L~Sgs~D----gsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~D------gtVrVWDl~tg~~l~ 143 (730)
++..++.|+.+ ..+.+||..+.+ +.........+.+ ++++++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 34444445433 568888887652 2111112223333 67777777764 468999998875322
Q ss_pred E--EecCCCCcEEEEEccCCCCEEEEEeC---------CCcEEEEECCCCeEEEEec--CCCCeEEEEEcCCCCEEEEEE
Q 004785 144 V--LHGHRRTPWVVRFHPLNPTIIASGSL---------DHEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 144 ~--l~gH~~~V~sVafSP~dg~lLaSgS~---------DgtVrLWDl~tg~~i~~l~--h~~~V~sVafSPdG~~LAsgS 210 (730)
. +.........+.+ ++.+++.|+. -..+.+||+.+.+-...-. ....-.+++.. ++++++.|+
T Consensus 133 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGG 208 (306)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred CCCCcCCcceeEEEEE---CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeC
Confidence 1 1111111122222 5677777653 3458899999886544422 22212222222 666666665
Q ss_pred C------CeEEEEEcCCCcc
Q 004785 211 G------HKLYIWRYNMREE 224 (730)
Q Consensus 211 d------d~I~VWDl~t~~~ 224 (730)
. +.+.+||+.+.+-
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp EETTEEBCCEEEEETTTTEE
T ss_pred CCCCCCCceEEEeeCCCCcE
Confidence 1 2389999887653
No 321
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.28 E-value=9.9 Score=42.33 Aligned_cols=120 Identities=14% Similarity=0.153 Sum_probs=85.0
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEE
Q 004785 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (730)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LA 207 (730)
+..|.|.|+.++..+..-.- .-.+.-.+| ..++++--. ..++.|+|+.+.+.++.+.....|.--.|-. .+.|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis-~~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEE-TTEEE
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecC-CCeEE
Confidence 34788889988654422111 123466788 667766654 6789999999999999988878888888864 46788
Q ss_pred EEECCeEEEEEcCCCccccCCeEEecC----CCCeEEEEEccCCCeEEEEEe
Q 004785 208 VASGHKLYIWRYNMREETSSPRIVLRT----RRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 208 sgSdd~I~VWDl~t~~~~~~~~~l~~h----~~~V~sVaFSPdG~~Llatgs 255 (730)
..++..|+-|++..... ....+..| ...|..-..+++.++++..|=
T Consensus 121 lVT~taVyHWsi~~~s~--P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 121 LVTDNAVYHWSMEGESQ--PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp EECSSEEEEEESSSSCC--CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEcCCeeEEecccCCCC--chhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 88888899999976332 11233333 457888889999999887663
No 322
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.11 E-value=43 Score=38.62 Aligned_cols=166 Identities=13% Similarity=0.023 Sum_probs=100.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCCC--------CCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecC----
Q 004785 81 RRGLASWVEAESLHHLRPKYCPLSP--------PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH---- 148 (730)
Q Consensus 81 g~~L~Sgs~DgsIrlWd~~t~~L~g--------H~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH---- 148 (730)
...|+.+..+ -|..++..+.++.. ....|.++....+|.+.+ ++.+ -|..+|..+++.. .+...
T Consensus 112 ~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~ 187 (758)
T 3ott_A 112 GDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSS 187 (758)
T ss_dssp TTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTT
T ss_pred CCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCccc
Confidence 4578877766 57788876554321 234688998888887665 4444 4778888776533 22211
Q ss_pred --CCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccc
Q 004785 149 --RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHKLYIWRYNMREET 225 (730)
Q Consensus 149 --~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~-h~~~V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~~ 225 (730)
...|.++.... ++..|..|.. +-+..+|..+++...... ....|.++..+.+|.+.+ |+++++.+++..+....
T Consensus 188 ~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~Gl~~~~~~~~~~~ 264 (758)
T 3ott_A 188 QSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDNGLYVYHNDTTPLQ 264 (758)
T ss_dssp CSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETTEEEEECCTTSCCE
T ss_pred cccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCCceeEEecCCCcEE
Confidence 12377787766 4553333443 458889988775433211 233578888888887554 44678999987665321
Q ss_pred cCCeE----EecCCCCeEEEEEccCCCeEEEE
Q 004785 226 SSPRI----VLRTRRSLRAVHFHPHAAPLLLT 253 (730)
Q Consensus 226 ~~~~~----l~~h~~~V~sVaFSPdG~~Llat 253 (730)
.-... ..-....|.++....+|...+.+
T Consensus 265 ~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 265 HIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred EEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 10000 00123468999988888866655
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=87.75 E-value=20 Score=35.79 Aligned_cols=128 Identities=13% Similarity=0.043 Sum_probs=70.1
Q ss_pred CeEEEEeCCCCC---CC------CCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCeEE--EEEecCCCCcEE
Q 004785 91 ESLHHLRPKYCP---LS------PPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCL--KVLHGHRRTPWV 154 (730)
Q Consensus 91 gsIrlWd~~t~~---L~------gH~~~Vt~lafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l--~~l~gH~~~V~s 154 (730)
..+.+||..+.+ .. .......++.+ ++++++.|+.+ ..+.+||..+.+-. ..+.........
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 155 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGL 155 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceE
Confidence 358888877654 11 11111222333 57777777653 46889998876522 222211111222
Q ss_pred EEEccCCCCEEEEEeCC-----CcEEEEECCCCeEEEEec--CCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCC
Q 004785 155 VRFHPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG------HKLYIWRYNM 221 (730)
Q Consensus 155 VafSP~dg~lLaSgS~D-----gtVrLWDl~tg~~i~~l~--h~~~V~sVafSPdG~~LAsgSd------d~I~VWDl~t 221 (730)
+.+ ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+. +.+.+||+.+
T Consensus 156 ~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 156 VVA---SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp EEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEE---CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCC
Confidence 222 56778877654 468999998876554422 2211112222 25666677662 2389999987
Q ss_pred Ccc
Q 004785 222 REE 224 (730)
Q Consensus 222 ~~~ 224 (730)
.+-
T Consensus 232 ~~W 234 (301)
T 2vpj_A 232 DSW 234 (301)
T ss_dssp TEE
T ss_pred CcE
Confidence 653
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.00 E-value=23 Score=35.64 Aligned_cols=129 Identities=11% Similarity=0.033 Sum_probs=71.4
Q ss_pred CCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEECCCCeEEEE--EecCCCCcEEEEE
Q 004785 90 AESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (730)
Q Consensus 90 DgsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~D----gtVrVWDl~tg~~l~~--l~gH~~~V~sVaf 157 (730)
...+..||..+.+ +.........+.+ ++++++.|+.+ ..+.+||..+++-... +.........+.+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 4567888877652 1111112223333 56777777754 6789999988753222 2111111222223
Q ss_pred ccCCCCEEEEEeCC------CcEEEEECCCCeEEEEec--CCCCeEEEEEcCCCCEEEEEE----------CCeEEEEEc
Q 004785 158 HPLNPTIIASGSLD------HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS----------GHKLYIWRY 219 (730)
Q Consensus 158 SP~dg~lLaSgS~D------gtVrLWDl~tg~~i~~l~--h~~~V~sVafSPdG~~LAsgS----------dd~I~VWDl 219 (730)
++.+++.|+.+ ..+.+||..+.+-...-. ....-.+++. -++++++.|+ .+.+.+||.
T Consensus 101 ---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 101 ---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp ---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred ---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCC
Confidence 66788887765 468999999876544422 2221122222 2666666665 123889998
Q ss_pred CCCcc
Q 004785 220 NMREE 224 (730)
Q Consensus 220 ~t~~~ 224 (730)
.+.+-
T Consensus 177 ~~~~W 181 (306)
T 3ii7_A 177 ATETW 181 (306)
T ss_dssp TTTEE
T ss_pred CCCeE
Confidence 87753
No 325
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=85.40 E-value=25 Score=38.97 Aligned_cols=103 Identities=21% Similarity=0.206 Sum_probs=60.3
Q ss_pred CeEEEEECCCCC-EEEEEeCCCeEEEEECCCC---eEEEEEe-----c----CCCCcEEEEEccC---CCCEEEEEeC--
Q 004785 109 STIAAAFSPDGK-TLASTHGDHTVKIIDCQTG---SCLKVLH-----G----HRRTPWVVRFHPL---NPTIIASGSL-- 170 (730)
Q Consensus 109 ~Vt~lafSPDG~-~LaSgS~DgtVrVWDl~tg---~~l~~l~-----g----H~~~V~sVafSP~---dg~lLaSgS~-- 170 (730)
.-..|+|.|||. .|+++...|.|++++.... ..+..+. + ..+....|+|+|+ ++.++++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 357899999996 5556678899999975322 1222221 1 1345788999993 2455554332
Q ss_pred C----------CcEEEEECCC----------CeEEEEec---CCCCeEEEEEcCCCCEEEEEEC
Q 004785 171 D----------HEVRLWNAST----------AECIGSRD---FYRPIASIAFHASGELLAVASG 211 (730)
Q Consensus 171 D----------gtVrLWDl~t----------g~~i~~l~---h~~~V~sVafSPdG~~LAsgSd 211 (730)
+ ..|.-|.+.. .+.+..+. .......|+|.|||++.++.++
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1344465542 12222222 2345688999999986665553
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=84.26 E-value=20 Score=35.80 Aligned_cols=126 Identities=18% Similarity=0.209 Sum_probs=68.9
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCeEEEE--EecCCCCcEEEEE
Q 004785 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (730)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~~--l~gH~~~V~sVaf 157 (730)
..+.+||..+.+ +......-.++.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+
T Consensus 128 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 205 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL 205 (301)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE
Confidence 358888887652 1111111222333 67777777654 4689999887753222 1111111222323
Q ss_pred ccCCCCEEEEEeCC-----CcEEEEECCCCeEEEEec--CCC-CeEEEEEcCCCCEEEEEE-C-----CeEEEEEcCCCc
Q 004785 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYR-PIASIAFHASGELLAVAS-G-----HKLYIWRYNMRE 223 (730)
Q Consensus 158 SP~dg~lLaSgS~D-----gtVrLWDl~tg~~i~~l~--h~~-~V~sVafSPdG~~LAsgS-d-----d~I~VWDl~t~~ 223 (730)
++.+++.|+.+ ..+.+||+.+.+-...-. ... ....+.+ ++++++.|+ + +.|.+||..+.+
T Consensus 206 ---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 206 ---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ---TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ---CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 56788887764 469999999876554422 221 1222222 666666665 2 227888887654
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=83.25 E-value=20 Score=35.88 Aligned_cols=126 Identities=18% Similarity=0.173 Sum_probs=67.6
Q ss_pred eEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-------CeEEEEECCCCeEEEE--EecCCCCcEEEE
Q 004785 92 SLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-------HTVKIIDCQTGSCLKV--LHGHRRTPWVVR 156 (730)
Q Consensus 92 sIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~D-------gtVrVWDl~tg~~l~~--l~gH~~~V~sVa 156 (730)
.+.+||..+.+ +........++.+ ++++++.|+.+ ..+.+||+.+.+=... +.........+.
T Consensus 125 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 202 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV 202 (302)
T ss_dssp EEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred eEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE
Confidence 57888887652 1111111222333 56777776542 3588999987652221 111111122222
Q ss_pred EccCCCCEEEEEeCC-----CcEEEEECCCCeEEEEec--CCCCeEEEEEcCCCCEEEEEE-C-----CeEEEEEcCCCc
Q 004785 157 FHPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS-G-----HKLYIWRYNMRE 223 (730)
Q Consensus 157 fSP~dg~lLaSgS~D-----gtVrLWDl~tg~~i~~l~--h~~~V~sVafSPdG~~LAsgS-d-----d~I~VWDl~t~~ 223 (730)
+ ++.+++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+ + +.+.+||..+.+
T Consensus 203 ~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 203 L---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp E---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred E---CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 2 56788887764 469999999876554422 1111112222 2566666665 2 128888887664
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=82.89 E-value=28 Score=36.55 Aligned_cols=132 Identities=12% Similarity=0.059 Sum_probs=70.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC--C-C-------CCCCCCeEEEEECCC---CCEEEEE-eC-------CCeEEE
Q 004785 75 EAGRDARRGLASWVEAESLHHLRPKYC--P-L-------SPPPRSTIAAAFSPD---GKTLAST-HG-------DHTVKI 133 (730)
Q Consensus 75 ~a~~d~g~~L~Sgs~DgsIrlWd~~t~--~-L-------~gH~~~Vt~lafSPD---G~~LaSg-S~-------DgtVrV 133 (730)
++...++..|+.....+.|++++.... + + ....+....|+|+|| +.+|+.+ +. ...|..
T Consensus 23 i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r 102 (353)
T 2g8s_A 23 LAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGY 102 (353)
T ss_dssp EEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEE
T ss_pred EEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEE
Confidence 333334442555556788888875422 1 1 112346789999996 4555444 22 235666
Q ss_pred EECCCC--e--EEE-EEec------CCCCcEEEEEccCCCCEEEEEeC-------------CCcEEEEECCCC-------
Q 004785 134 IDCQTG--S--CLK-VLHG------HRRTPWVVRFHPLNPTIIASGSL-------------DHEVRLWNASTA------- 182 (730)
Q Consensus 134 WDl~tg--~--~l~-~l~g------H~~~V~sVafSP~dg~lLaSgS~-------------DgtVrLWDl~tg------- 182 (730)
|+...+ + ..+ .+.. .......|+|.| ++.++++.+. .+.|.-+|....
T Consensus 103 ~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf 181 (353)
T 2g8s_A 103 GRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPF 181 (353)
T ss_dssp EEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTT
T ss_pred EEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCC
Confidence 766543 1 112 1221 112245799999 7777776543 245777776532
Q ss_pred -------eEEEEecCCCCeEEEEEcC-CCCEEEE
Q 004785 183 -------ECIGSRDFYRPIASIAFHA-SGELLAV 208 (730)
Q Consensus 183 -------~~i~~l~h~~~V~sVafSP-dG~~LAs 208 (730)
..+...++ .....++|+| +|++.++
T Consensus 182 ~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 182 IKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred cCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 11222233 3467899999 5554443
No 329
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=82.42 E-value=42 Score=36.06 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=92.0
Q ss_pred CCeEEEEeCCCCC-CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEE
Q 004785 90 AESLHHLRPKYCP-LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASG 168 (730)
Q Consensus 90 DgsIrlWd~~t~~-L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSg 168 (730)
+..|-+.|+.... ....+-.--+.-.+|..+.||.-. ..++.|+|+++...++.+.-. ..|.--.|-. .+.|+-.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis--~~~L~lV 123 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWIS--LNTVALV 123 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECS--SSEEEEE
T ss_pred CCEEEEEECCCCCCccccccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecC--CCeEEEE
Confidence 3468888886542 111111223556688888877765 679999999999999888754 4577778864 4545444
Q ss_pred eCCCcEEEEECCC-CeEEEEecC-----CCCeEEEEEcCCCCEEEEEE----CC----eEEEEEcCCCccccCCeEEecC
Q 004785 169 SLDHEVRLWNAST-AECIGSRDF-----YRPIASIAFHASGELLAVAS----GH----KLYIWRYNMREETSSPRIVLRT 234 (730)
Q Consensus 169 S~DgtVrLWDl~t-g~~i~~l~h-----~~~V~sVafSPdG~~LAsgS----dd----~I~VWDl~t~~~~~~~~~l~~h 234 (730)
+ +..|+-|++.. ..+++.++. ...|.....+++.++++..+ ++ .+.+|..+.+.. ..+.+|
T Consensus 124 T-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s----Q~ieGh 198 (365)
T 2xzh_A 124 T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGH 198 (365)
T ss_dssp E-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE----EEECCS
T ss_pred c-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc----ceeeee
Confidence 4 34699999974 355666542 35677888899999877665 33 388998876643 246666
Q ss_pred CCC
Q 004785 235 RRS 237 (730)
Q Consensus 235 ~~~ 237 (730)
...
T Consensus 199 aa~ 201 (365)
T 2xzh_A 199 AAS 201 (365)
T ss_dssp EEE
T ss_pred eee
Confidence 433
No 330
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=81.56 E-value=37 Score=33.92 Aligned_cols=128 Identities=18% Similarity=0.159 Sum_probs=68.8
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCeEEEE--EecCCCCcEEEEE
Q 004785 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (730)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~~--l~gH~~~V~sVaf 157 (730)
..+.+||..+.+ +.........+.+ ++++++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 154 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV 154 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE
Confidence 357888887652 1111112223333 57777778765 3588899887652221 1111111222222
Q ss_pred ccCCCCEEEEEeCC-------CcEEEEECCCCeEEEEe--cCCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCCC
Q 004785 158 HPLNPTIIASGSLD-------HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG------HKLYIWRYNMR 222 (730)
Q Consensus 158 SP~dg~lLaSgS~D-------gtVrLWDl~tg~~i~~l--~h~~~V~sVafSPdG~~LAsgSd------d~I~VWDl~t~ 222 (730)
++++++.|+.+ ..+.+||+.+.+-...- .....-.+++. -++++++.|+. +.+.+||..+.
T Consensus 155 ---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 155 ---GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp ---TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred ---CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 56777776542 45899999887655442 22221122222 25677777652 23899998776
Q ss_pred cc
Q 004785 223 EE 224 (730)
Q Consensus 223 ~~ 224 (730)
+-
T Consensus 231 ~W 232 (302)
T 2xn4_A 231 AW 232 (302)
T ss_dssp EE
T ss_pred CE
Confidence 43
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=80.38 E-value=37 Score=34.32 Aligned_cols=129 Identities=9% Similarity=-0.010 Sum_probs=69.6
Q ss_pred CeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEEEEEeC-----C------CeEEEEECCCCeEEEEEec---CCCC
Q 004785 91 ESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHG-----D------HTVKIIDCQTGSCLKVLHG---HRRT 151 (730)
Q Consensus 91 gsIrlWd~~t~~-----L~gH~~~Vt~lafSPDG~~LaSgS~-----D------gtVrVWDl~tg~~l~~l~g---H~~~ 151 (730)
..+..||..+.+ +..............++++++.|+. . ..+.+||..+++- ..+.. ....
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-LGMPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE-EECCCBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE-EECCCCCcchhc
Confidence 567777877653 2222222333333457888888873 1 2378889887652 22211 1111
Q ss_pred cEEEEEccCCCCEEEEEeCC--------CcEEEEECCCCeEEEEec--CCCCeEEEEEcCCCCEEEEEEC-------CeE
Q 004785 152 PWVVRFHPLNPTIIASGSLD--------HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG-------HKL 214 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~D--------gtVrLWDl~tg~~i~~l~--h~~~V~sVafSPdG~~LAsgSd-------d~I 214 (730)
...+.+ ++.+++.|+.+ ..+.+||..+++-...-. ....-.+++. -++++++.|+. +.+
T Consensus 92 ~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 167 (315)
T 4asc_A 92 FGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKM 167 (315)
T ss_dssp CEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCE
T ss_pred eeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceE
Confidence 122222 56777777642 458999999876544322 2221122222 35666666653 238
Q ss_pred EEEEcCCCcc
Q 004785 215 YIWRYNMREE 224 (730)
Q Consensus 215 ~VWDl~t~~~ 224 (730)
.+||..+.+-
T Consensus 168 ~~yd~~~~~W 177 (315)
T 4asc_A 168 CVYDPKKFEW 177 (315)
T ss_dssp EEEETTTTEE
T ss_pred EEEeCCCCeE
Confidence 9999887653
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=80.35 E-value=33 Score=34.66 Aligned_cols=128 Identities=14% Similarity=0.107 Sum_probs=69.4
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCeEEE--EEecCCCCcEEEEE
Q 004785 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLK--VLHGHRRTPWVVRF 157 (730)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~--~l~gH~~~V~sVaf 157 (730)
..+.+||..+.+ +.........+.+ ++++++.|+.+ ..+.+||..+.+-.. .+.........+.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 357888887652 1111112223333 67777777643 468899988765221 11111111222333
Q ss_pred ccCCCCEEEEEeCC-----CcEEEEECCCCeEEEEe--cCCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCCCcc
Q 004785 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG------HKLYIWRYNMREE 224 (730)
Q Consensus 158 SP~dg~lLaSgS~D-----gtVrLWDl~tg~~i~~l--~h~~~V~sVafSPdG~~LAsgSd------d~I~VWDl~t~~~ 224 (730)
++.+++.|+.+ ..+.+||+.+.+-...- .....-.+++.. ++++++.|+. +.+.+||+.+.+-
T Consensus 168 ---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 ---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp ---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56777777654 45899999887654432 222211222222 6677777652 2399999887653
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=79.50 E-value=24 Score=35.71 Aligned_cols=127 Identities=13% Similarity=0.098 Sum_probs=68.7
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEECCCCeEEE--EEecCCCCcEEEEE
Q 004785 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLK--VLHGHRRTPWVVRF 157 (730)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~Vt~lafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~--~l~gH~~~V~sVaf 157 (730)
..+.+||..+.+ +......-.++.+ ++++++.|+.+ ..+.+||+.+.+=.. .+.........+.+
T Consensus 137 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 214 (308)
T 1zgk_A 137 NSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL 214 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE
Confidence 357888887652 1111112223333 67777777654 468899988764221 11111111222333
Q ss_pred ccCCCCEEEEEeCC-----CcEEEEECCCCeEEEEec--CCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCCCc
Q 004785 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG------HKLYIWRYNMRE 223 (730)
Q Consensus 158 SP~dg~lLaSgS~D-----gtVrLWDl~tg~~i~~l~--h~~~V~sVafSPdG~~LAsgSd------d~I~VWDl~t~~ 223 (730)
++.+++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+. +.+.+||+.+.+
T Consensus 215 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 215 ---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp ---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 56788887764 569999999876554322 2111122222 25666666652 227888877654
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=79.47 E-value=4.7 Score=46.17 Aligned_cols=101 Identities=18% Similarity=0.149 Sum_probs=68.9
Q ss_pred CCeEEEEECCCCCEEEEEeC-CCeEEEEECCCC------eE-------EEEEecCCCCcEEEEEccCCCCEEEEEeCCCc
Q 004785 108 RSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTG------SC-------LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE 173 (730)
Q Consensus 108 ~~Vt~lafSPDG~~LaSgS~-DgtVrVWDl~tg------~~-------l~~l~gH~~~V~sVafSP~dg~lLaSgS~Dgt 173 (730)
.....+.++|||++++.++. +.+|.++|++.. +. ....+ -.-.....+|.+ +++.+.|--.|..
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecce
Confidence 34568899999999988776 789999998741 11 22222 223467789999 7765566668999
Q ss_pred EEEEECCCC----------eEEEEecCCCCeEEEEE------cCCCCEEEEEE
Q 004785 174 VRLWNASTA----------ECIGSRDFYRPIASIAF------HASGELLAVAS 210 (730)
Q Consensus 174 VrLWDl~tg----------~~i~~l~h~~~V~sVaf------SPdG~~LAsgS 210 (730)
|..|++.+. ..+..+.-...+-.+.- .|||++|++..
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999999753 34444543333434433 68999999987
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=77.94 E-value=58 Score=36.27 Aligned_cols=143 Identities=13% Similarity=0.108 Sum_probs=93.9
Q ss_pred CCeEEEEeCCCCC-CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEE
Q 004785 90 AESLHHLRPKYCP-LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASG 168 (730)
Q Consensus 90 DgsIrlWd~~t~~-L~gH~~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSg 168 (730)
+..|-+.|+.... ....+-.--+.-.+|..+.||.-. ..++.|+|+++...++.+.-.. .|.--.|-. .+.++-.
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis--~~~l~lV 122 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWIS--LNTVALV 122 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEE--TTEEEEE
T ss_pred CCeEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecC--CCeEEEE
Confidence 3468888876541 111112223566788777777665 6799999999999998887554 476778864 3444443
Q ss_pred eCCCcEEEEECCC-CeEEEEecC-----CCCeEEEEEcCCCCEEEEEE----CC----eEEEEEcCCCccccCCeEEecC
Q 004785 169 SLDHEVRLWNAST-AECIGSRDF-----YRPIASIAFHASGELLAVAS----GH----KLYIWRYNMREETSSPRIVLRT 234 (730)
Q Consensus 169 S~DgtVrLWDl~t-g~~i~~l~h-----~~~V~sVafSPdG~~LAsgS----dd----~I~VWDl~t~~~~~~~~~l~~h 234 (730)
+ +..|+-|++.. ..+++.++. ...|.....+++.++++..+ ++ .+.+|..+.+.. ..+.+|
T Consensus 123 T-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s----Q~ieGh 197 (494)
T 1bpo_A 123 T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGH 197 (494)
T ss_dssp C-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE----EEECCS
T ss_pred c-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc----chheee
Confidence 3 45699999974 345666542 35677888899999887665 33 389998876643 346677
Q ss_pred CCCeEEE
Q 004785 235 RRSLRAV 241 (730)
Q Consensus 235 ~~~V~sV 241 (730)
......+
T Consensus 198 aa~F~~~ 204 (494)
T 1bpo_A 198 AASFAQF 204 (494)
T ss_dssp EEEEEEE
T ss_pred eeeeEEE
Confidence 5444333
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=77.22 E-value=52 Score=33.15 Aligned_cols=101 Identities=8% Similarity=0.003 Sum_probs=57.3
Q ss_pred CCCEEEEEeCC--------CeEEEEECCCCeEEEEEe---cCCCCcEEEEEccCCCCEEEEEeC-C-----CcEEEEECC
Q 004785 118 DGKTLASTHGD--------HTVKIIDCQTGSCLKVLH---GHRRTPWVVRFHPLNPTIIASGSL-D-----HEVRLWNAS 180 (730)
Q Consensus 118 DG~~LaSgS~D--------gtVrVWDl~tg~~l~~l~---gH~~~V~sVafSP~dg~lLaSgS~-D-----gtVrLWDl~ 180 (730)
++++++.|+.+ ..+.+||..+.+= ..+. ........+. - ++++++.|+. + ..+.+||..
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-GESDPLPYVVYGHTVLS--H-MDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEE--E-TTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcE-eECCCCCCcccceeEEE--E-CCEEEEEeCCCCCCcccceEEEEeCC
Confidence 56777777632 4589999987642 2221 1111122222 2 5678888776 2 468999998
Q ss_pred CCeEEEEec--CCCCeEEEEEcCCCCEEEEEE-CC-----eEEEEEcCCCc
Q 004785 181 TAECIGSRD--FYRPIASIAFHASGELLAVAS-GH-----KLYIWRYNMRE 223 (730)
Q Consensus 181 tg~~i~~l~--h~~~V~sVafSPdG~~LAsgS-dd-----~I~VWDl~t~~ 223 (730)
+.+-...-. ....-.+++. -++++++.|+ ++ .+.+||..+.+
T Consensus 174 ~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 174 KFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 876544322 2221122222 2667777776 22 38889987764
No 337
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=75.22 E-value=1.1e+02 Score=37.98 Aligned_cols=93 Identities=13% Similarity=0.148 Sum_probs=58.2
Q ss_pred eEEEEECCCCeEEEEEecCC-CCcEEEE---EccCCCCEEEEEe----------CCCcEEEEECCCCeEE--EEecCCCC
Q 004785 130 TVKIIDCQTGSCLKVLHGHR-RTPWVVR---FHPLNPTIIASGS----------LDHEVRLWNASTAECI--GSRDFYRP 193 (730)
Q Consensus 130 tVrVWDl~tg~~l~~l~gH~-~~V~sVa---fSP~dg~lLaSgS----------~DgtVrLWDl~tg~~i--~~l~h~~~ 193 (730)
.|++.|-.+.+.+..+.-.. ..+.+++ |..+...+++.|. ..|.|+++++..++.. .....++.
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 36777777776665553221 2234443 4332346777765 2467999998755433 33456788
Q ss_pred eEEEEEcCCCCEEEEEECCeEEEEEcCCCcc
Q 004785 194 IASIAFHASGELLAVASGHKLYIWRYNMREE 224 (730)
Q Consensus 194 V~sVafSPdG~~LAsgSdd~I~VWDl~t~~~ 224 (730)
+++++-- +| +|++|-+.+|++||+...+.
T Consensus 888 v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~ 916 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLASINSTVRLYEWTTEKE 916 (1158)
T ss_dssp EEEEEEE-TT-EEEEEETTEEEEEEECTTSC
T ss_pred CEEEeee-CC-EEEEEcCCEEEEEECCCCce
Confidence 8888733 34 67777788899999976653
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=72.39 E-value=1.9e+02 Score=35.69 Aligned_cols=137 Identities=12% Similarity=0.125 Sum_probs=77.8
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE-ecCCCCcEEEEEccCC-----CCEEEEEeC-CCcEEEEECC
Q 004785 108 RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL-HGHRRTPWVVRFHPLN-----PTIIASGSL-DHEVRLWNAS 180 (730)
Q Consensus 108 ~~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l-~gH~~~V~sVafSP~d-----g~lLaSgS~-DgtVrLWDl~ 180 (730)
..|...+.+ +.+++.++ ++.+.++++..++..... ..-...|.|+++.|.. .++++.|.. |++|+|+++.
T Consensus 514 ~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 514 KNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 356666655 34666665 577888887766422211 1234679999998632 478999986 9999999999
Q ss_pred CCeEEEEecC--CCCeEEEEEcC--CCCEEEEEECCe-E--EEEEcCCCccccCCeEEecCCCCeEEEEEccCCC
Q 004785 181 TAECIGSRDF--YRPIASIAFHA--SGELLAVASGHK-L--YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA 248 (730)
Q Consensus 181 tg~~i~~l~h--~~~V~sVafSP--dG~~LAsgSdd~-I--~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~ 248 (730)
+.+.+..... .....++.+.. ...+|.+|-.++ + ..+|..++..........+ ..++.-..|...|.
T Consensus 591 ~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~ 664 (1158)
T 3ei3_A 591 SFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLST 664 (1158)
T ss_dssp TCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSC
T ss_pred CCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCc
Confidence 8776654332 23445554432 234777776554 3 3344444433221122222 34554444544444
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=70.30 E-value=94 Score=31.25 Aligned_cols=125 Identities=13% Similarity=0.089 Sum_probs=66.3
Q ss_pred EEEEeCCCCC---C---CCCCCCeEEEEECCCCCEEEEEeCC-------CeEEEEECCCCeEEEEEecCCCCc--EEEEE
Q 004785 93 LHHLRPKYCP---L---SPPPRSTIAAAFSPDGKTLASTHGD-------HTVKIIDCQTGSCLKVLHGHRRTP--WVVRF 157 (730)
Q Consensus 93 IrlWd~~t~~---L---~gH~~~Vt~lafSPDG~~LaSgS~D-------gtVrVWDl~tg~~l~~l~gH~~~V--~sVaf 157 (730)
+..||..+.+ + .........+.+ ++++++.|+.+ ..+.+||..+.+=. .+....... .++..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~ 156 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPIKVYGHNVIS 156 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSSCEESCEEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCCcccccEEEE
Confidence 7778877652 1 111111222333 57777777754 35888998876522 221111110 11222
Q ss_pred ccCCCCEEEEEeC------CCcEEEEECCCCeEEEEe--cCCCCeEEEEEcCCCCEEEEEE--CC----eEEEEEcCCCc
Q 004785 158 HPLNPTIIASGSL------DHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVAS--GH----KLYIWRYNMRE 223 (730)
Q Consensus 158 SP~dg~lLaSgS~------DgtVrLWDl~tg~~i~~l--~h~~~V~sVafSPdG~~LAsgS--dd----~I~VWDl~t~~ 223 (730)
- ++.+++.|+. -..+.++|+.+.+-...- .....-.+++. -++++++.|+ +. .+.+||+.+.+
T Consensus 157 -~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 157 -H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp -E-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred -E-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 2 6677777764 245999999987654442 22221122222 2567777776 22 27889987764
No 340
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=69.03 E-value=1.2e+02 Score=31.80 Aligned_cols=108 Identities=8% Similarity=-0.048 Sum_probs=55.0
Q ss_pred CCeEEEEECC-CCCEEEEEeCCC----eEEEEECCCCeEEEEEec--------------CCCCcEEEEEccCC-CCEEEE
Q 004785 108 RSTIAAAFSP-DGKTLASTHGDH----TVKIIDCQTGSCLKVLHG--------------HRRTPWVVRFHPLN-PTIIAS 167 (730)
Q Consensus 108 ~~Vt~lafSP-DG~~LaSgS~Dg----tVrVWDl~tg~~l~~l~g--------------H~~~V~sVafSP~d-g~lLaS 167 (730)
..|.+|++.| +...|..+...+ .|... ...|+....+.. ....|.++++.|.+ ...+..
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4699999998 344455555444 34433 233443333221 11246778888743 455555
Q ss_pred EeCCCcEEEEECCCCeEEEEec--------------------CCCCeEEEEEcCC-CCEEEEEE-CCeEEEE
Q 004785 168 GSLDHEVRLWNASTAECIGSRD--------------------FYRPIASIAFHAS-GELLAVAS-GHKLYIW 217 (730)
Q Consensus 168 gS~DgtVrLWDl~tg~~i~~l~--------------------h~~~V~sVafSPd-G~~LAsgS-dd~I~VW 217 (730)
+...+.|...+-. |+....+. ....+.+|.++|. ...|+++. .+.|+..
T Consensus 134 g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 134 GTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred EecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 5555656555322 22211111 1235789999984 34444444 4555443
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=67.46 E-value=4.2 Score=43.44 Aligned_cols=108 Identities=12% Similarity=0.031 Sum_probs=66.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEEecC-CCCcEEEEEc--cCCCCEEEEE-eCCCcEEEEECCCCeEEEEec-----
Q 004785 119 GKTLASTHGDHTVKIIDCQTGSCLKVLHGH-RRTPWVVRFH--PLNPTIIASG-SLDHEVRLWNASTAECIGSRD----- 189 (730)
Q Consensus 119 G~~LaSgS~DgtVrVWDl~tg~~l~~l~gH-~~~V~sVafS--P~dg~lLaSg-S~DgtVrLWDl~tg~~i~~l~----- 189 (730)
+.+++.++.||.|.-+|.++|+.+..++.. ..++....-. +.++..++.. ..||.|..+|..+|.....+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 347888999999999999999999888754 1222221100 1122344333 689999999999886654433
Q ss_pred CCCCeEE---EEE-cC----CCCEEEEEE-CCeEEEEEcCCCcccc
Q 004785 190 FYRPIAS---IAF-HA----SGELLAVAS-GHKLYIWRYNMREETS 226 (730)
Q Consensus 190 h~~~V~s---Vaf-SP----dG~~LAsgS-dd~I~VWDl~t~~~~~ 226 (730)
...++.. ... .+ .+..+++|+ +++++..|+.+++.+.
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 1222221 000 01 344566666 5569999999887643
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=66.38 E-value=1e+02 Score=31.52 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=55.4
Q ss_pred CCCEEEEEeC-C---------CeEEEEECCCCeEEEEEecC--CCCcEEEEEccCCCCEEEEEeCC--------------
Q 004785 118 DGKTLASTHG-D---------HTVKIIDCQTGSCLKVLHGH--RRTPWVVRFHPLNPTIIASGSLD-------------- 171 (730)
Q Consensus 118 DG~~LaSgS~-D---------gtVrVWDl~tg~~l~~l~gH--~~~V~sVafSP~dg~lLaSgS~D-------------- 171 (730)
++++++.|+. + ..+.+||..+.+= ..+... .......+..- ++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W-~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 142 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW-VKLMSHAPMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDLNEA 142 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEE-EECSCCCSSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE-EECCCCCCcccccceEEEE-CCEEEEEeCcCCCcCcccccchhhc
Confidence 5677777765 2 4689999987652 222211 11111112223 67888888765
Q ss_pred -------------------------CcEEEEECCCCeEEEEe--cCCCCe-EEEEEcCCCCEEEEEEC-------CeEEE
Q 004785 172 -------------------------HEVRLWNASTAECIGSR--DFYRPI-ASIAFHASGELLAVASG-------HKLYI 216 (730)
Q Consensus 172 -------------------------gtVrLWDl~tg~~i~~l--~h~~~V-~sVafSPdG~~LAsgSd-------d~I~V 216 (730)
..+.+||..+.+-...- ...... .+++.. ++++++.|+. ..+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEE
T ss_pred CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEE
Confidence 57999999887654442 222222 233332 5666666651 23777
Q ss_pred EEc
Q 004785 217 WRY 219 (730)
Q Consensus 217 WDl 219 (730)
||+
T Consensus 222 ~d~ 224 (357)
T 2uvk_A 222 LDF 224 (357)
T ss_dssp EEC
T ss_pred EEe
Confidence 887
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=66.32 E-value=62 Score=37.42 Aligned_cols=132 Identities=15% Similarity=0.125 Sum_probs=73.8
Q ss_pred eEEEEeCCCCC---CC--CCCCCeEEEEECCCCCEEEEEeCCC--eEEEEECCCCeEEEEEec------CCCCcEEEEEc
Q 004785 92 SLHHLRPKYCP---LS--PPPRSTIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVLHG------HRRTPWVVRFH 158 (730)
Q Consensus 92 sIrlWd~~t~~---L~--gH~~~Vt~lafSPDG~~LaSgS~Dg--tVrVWDl~tg~~l~~l~g------H~~~V~sVafS 158 (730)
.+.+||..+.+ +. .....-.+++.-.++++++.|+.++ .+.+||..+.+ ...+.. ......++.+.
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEE
T ss_pred cEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEe
Confidence 47888887642 11 1111222333334788888887654 79999998865 222221 12222335666
Q ss_pred cCCCCEEEEEeC--C-----CcEEEEECCCCe------EEEEec---CCCCeEEEEEcCCCCEEEEEEC---------Ce
Q 004785 159 PLNPTIIASGSL--D-----HEVRLWNASTAE------CIGSRD---FYRPIASIAFHASGELLAVASG---------HK 213 (730)
Q Consensus 159 P~dg~lLaSgS~--D-----gtVrLWDl~tg~------~i~~l~---h~~~V~sVafSPdG~~LAsgSd---------d~ 213 (730)
..++.+++.|+. + ..+.+||+.+.+ ...... ....-.+++...++++++.|+. +.
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence 523678888775 2 458999998877 222211 1111223333334777777761 22
Q ss_pred EEEEEcCCCcc
Q 004785 214 LYIWRYNMREE 224 (730)
Q Consensus 214 I~VWDl~t~~~ 224 (730)
|.+||..+.+-
T Consensus 628 v~~yd~~t~~W 638 (695)
T 2zwa_A 628 IISLDPLSETL 638 (695)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCeE
Confidence 99999987653
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.57 E-value=84 Score=37.92 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=33.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~ 146 (730)
.+.+++..++..++++-+.|+++|+|++.+++++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 57788888888999999999999999999999887653
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=65.20 E-value=48 Score=36.58 Aligned_cols=105 Identities=13% Similarity=0.137 Sum_probs=59.2
Q ss_pred CCcEEEEEccCCCC-EEEEEeCCCcEEEEECCCCe---EEEEec----------CCCCeEEEEEcCC---CCEEEEE--E
Q 004785 150 RTPWVVRFHPLNPT-IIASGSLDHEVRLWNASTAE---CIGSRD----------FYRPIASIAFHAS---GELLAVA--S 210 (730)
Q Consensus 150 ~~V~sVafSP~dg~-lLaSgS~DgtVrLWDl~tg~---~i~~l~----------h~~~V~sVafSPd---G~~LAsg--S 210 (730)
...+.|+|.| ++. .++.+...|.|++++..... .+..+. .......|+|+|+ ..+|++. .
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4578899999 664 45555788999999754321 112111 1356789999997 2333332 2
Q ss_pred C------------CeEEEEEcCCC--cc--ccCCeE---Ee--cCCCCeEEEEEccCCCeEEEEEe
Q 004785 211 G------------HKLYIWRYNMR--EE--TSSPRI---VL--RTRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 211 d------------d~I~VWDl~t~--~~--~~~~~~---l~--~h~~~V~sVaFSPdG~~Llatgs 255 (730)
. ..|.-|.+... .. ...... .. ...-.-..|.|.|||..+++++.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13555666432 10 001111 11 11224678999999987777765
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=64.37 E-value=22 Score=40.78 Aligned_cols=123 Identities=11% Similarity=0.128 Sum_probs=70.3
Q ss_pred EEEEECCC----CeEEEEEecCCCCcEEEEEccCCCCEEE-EEeCCCcEEEEECCC------CeE-------EEEecCCC
Q 004785 131 VKIIDCQT----GSCLKVLHGHRRTPWVVRFHPLNPTIIA-SGSLDHEVRLWNAST------AEC-------IGSRDFYR 192 (730)
Q Consensus 131 VrVWDl~t----g~~l~~l~gH~~~V~sVafSP~dg~lLa-SgS~DgtVrLWDl~t------g~~-------i~~l~h~~ 192 (730)
|.|.|.+. +..+..+-.-......+.++| ++++++ ++-.+.+|.++|+.+ ++. ....+..-
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 55666554 322222222234466799999 665554 555689999999974 121 22233445
Q ss_pred CeEEEEEcCCCCEEEEEE--CCeEEEEEcCCC------ccccCCeEEecCCCCeEEEEE------ccCCCeEEEEEe
Q 004785 193 PIASIAFHASGELLAVAS--GHKLYIWRYNMR------EETSSPRIVLRTRRSLRAVHF------HPHAAPLLLTAE 255 (730)
Q Consensus 193 ~V~sVafSPdG~~LAsgS--dd~I~VWDl~t~------~~~~~~~~l~~h~~~V~sVaF------SPdG~~Llatgs 255 (730)
.....+|+++| ..++.- |..|..|++... +..........-...+-.+.- .+||++|++...
T Consensus 379 GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 379 GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp CEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred cccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 67789999999 444443 666999998753 211111111222233334433 678998877654
No 347
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=60.88 E-value=2.5e+02 Score=32.71 Aligned_cols=238 Identities=8% Similarity=-0.011 Sum_probs=120.8
Q ss_pred cCCCEEEEEeCCC----eEEEEeCCCCCCCC-CCC-C----------eEEEEECCCCCEEEEEe-----------CCCeE
Q 004785 79 DARRGLASWVEAE----SLHHLRPKYCPLSP-PPR-S----------TIAAAFSPDGKTLASTH-----------GDHTV 131 (730)
Q Consensus 79 d~g~~L~Sgs~Dg----sIrlWd~~t~~L~g-H~~-~----------Vt~lafSPDG~~LaSgS-----------~DgtV 131 (730)
+....+++.+..| .|+++|+.++++.. .-. . ...++|- |...++.+. ....|
T Consensus 140 ~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~~~v 218 (711)
T 4hvt_A 140 NPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLYPNSL 218 (711)
T ss_dssp STTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSSBCEE
T ss_pred CCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCCCCEE
Confidence 3555666666555 48999999885432 111 1 1344776 444444432 13679
Q ss_pred EEEECCCC--eEEEEEecCCCCcE-EEEEccCCCC-----EEEEEeCC---CcEEEEECCC--CeEEEEecCCCCeEEEE
Q 004785 132 KIIDCQTG--SCLKVLHGHRRTPW-VVRFHPLNPT-----IIASGSLD---HEVRLWNAST--AECIGSRDFYRPIASIA 198 (730)
Q Consensus 132 rVWDl~tg--~~l~~l~gH~~~V~-sVafSP~dg~-----lLaSgS~D---gtVrLWDl~t--g~~i~~l~h~~~V~sVa 198 (730)
+.|.+-+. +-...|.+....+. ....++ ++. ++++.+.| ..+.+.|... ++.+.. ...... .+.
T Consensus 219 ~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~-~~~ 295 (711)
T 4hvt_A 219 YIWKRGESIEKAKKLFEVPKEYIYVSAGKLL-SDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKI-NMPSDA-TLQ 295 (711)
T ss_dssp EEEETTSCGGGCEEEEECCTTSCEEEEEESS-CTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEEC-CSCTTC-EEE
T ss_pred EEEECCCChHHCeEEeccCCCceEEEEEEec-CCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEe-ecCCcc-eEe
Confidence 99988664 23445655444443 344455 333 35554422 4567777654 443333 222222 233
Q ss_pred EcCCCCEEEEEE-----------CCeEEEEEcCCCcc----ccCCeEEecC--CCCeEEEEEccCCCeEEEEEeeCCccC
Q 004785 199 FHASGELLAVAS-----------GHKLYIWRYNMREE----TSSPRIVLRT--RRSLRAVHFHPHAAPLLLTAEVNDLDS 261 (730)
Q Consensus 199 fSPdG~~LAsgS-----------dd~I~VWDl~t~~~----~~~~~~l~~h--~~~V~sVaFSPdG~~Llatgsvwdl~s 261 (730)
.+.++.+++... .++|.+.|+..... ......+..+ ...+..+.|..+ +++++.......
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~~~~- 372 (711)
T 4hvt_A 296 GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--RVFLATYDNVVA- 372 (711)
T ss_dssp EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--CEEEEEEETTEE-
T ss_pred eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--EEEEEEEECCEE-
Confidence 455666555331 23488899876421 0112232333 345677888765 355544322111
Q ss_pred CCcceeEeccCCcccCCCCeEEEecCCCCC--CCCcccccCCCCCCceeeeEecCCCEEEEEecCCCCCcccceeecCCC
Q 004785 262 SESSLTLATSPGYWRYPPPVICMAGAHSSS--HPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSS 339 (730)
Q Consensus 262 ~~~~~~l~t~sG~~~~p~~~V~l~d~~s~d--~~~L~~~~~~~slpil~p~FSpDg~rI~~~~~~~dsgs~~~~~~~~ss 339 (730)
.+.+.+...+. ...+... +. ...+.....++|++.+++...+...+...+..++. .
T Consensus 373 -------------------~l~~~~~~~g~~~~~~~i~l-p~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~ 430 (711)
T 4hvt_A 373 -------------------KVVTFTLENEQWTKPVVLKL-PY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-H 430 (711)
T ss_dssp -------------------EEEEECEETTEECCCEEECC-CS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-S
T ss_pred -------------------EEEEEECCCCceEEEeccCC-CC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-C
Confidence 22222211111 0000000 00 00122345568899999999999999999998877 4
Q ss_pred cceeee
Q 004785 340 SSVRLL 345 (730)
Q Consensus 340 ~~~~l~ 345 (730)
..+.|.
T Consensus 431 ~~~~l~ 436 (711)
T 4hvt_A 431 ELKIIR 436 (711)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 444443
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=60.17 E-value=1.1e+02 Score=35.22 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=64.0
Q ss_pred EEEECCCCCEEEEEeCC------CeEEEEECCCCeEE--EEEecCCCCcEEEEEccCCCCEEEEEeCCC--cEEEEECCC
Q 004785 112 AAAFSPDGKTLASTHGD------HTVKIIDCQTGSCL--KVLHGHRRTPWVVRFHPLNPTIIASGSLDH--EVRLWNAST 181 (730)
Q Consensus 112 ~lafSPDG~~LaSgS~D------gtVrVWDl~tg~~l--~~l~gH~~~V~sVafSP~dg~lLaSgS~Dg--tVrLWDl~t 181 (730)
.+.+..++++++.|+.+ ..+.+||..+.+=. ..+...... .++..-. ++.+++.|+.++ .+.+||..+
T Consensus 445 ~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 445 FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLP-DGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECT-TSCEEEECCBCSSCSEEEEETTT
T ss_pred EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEc-CCEEEEECCCCCCCCEEEEECCC
Confidence 33343267788888753 35889998875421 111111111 2233323 678888887654 799999998
Q ss_pred CeEEEEec------CCCCeEEEEEcCC-CCEEEEEEC--------CeEEEEEcCCCc
Q 004785 182 AECIGSRD------FYRPIASIAFHAS-GELLAVASG--------HKLYIWRYNMRE 223 (730)
Q Consensus 182 g~~i~~l~------h~~~V~sVafSPd-G~~LAsgSd--------d~I~VWDl~t~~ 223 (730)
.+-..... ......++.+..+ +++++.|+. +.+.+||+.+..
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 76544321 1122234566665 666666652 238999998776
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=58.99 E-value=1.6e+02 Score=29.93 Aligned_cols=80 Identities=8% Similarity=-0.173 Sum_probs=37.9
Q ss_pred CeEEEEECCCCeE--EEEEecCCCCcEEEEEccCCCCEEEEEeC------CCcEEEEEC--CCCeEEEEec--CCC-CeE
Q 004785 129 HTVKIIDCQTGSC--LKVLHGHRRTPWVVRFHPLNPTIIASGSL------DHEVRLWNA--STAECIGSRD--FYR-PIA 195 (730)
Q Consensus 129 gtVrVWDl~tg~~--l~~l~gH~~~V~sVafSP~dg~lLaSgS~------DgtVrLWDl--~tg~~i~~l~--h~~-~V~ 195 (730)
..+.+||..+.+= +..+......-.++... ++.+++.|+. ...+.++|+ .+.+-..... ... ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 5799999987642 22222111111233332 5677777653 345788887 4444333211 111 112
Q ss_pred EEEEcCCCCEEEEEE
Q 004785 196 SIAFHASGELLAVAS 210 (730)
Q Consensus 196 sVafSPdG~~LAsgS 210 (730)
..+...++++++.|+
T Consensus 246 ~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 246 GFAGISNDSLIFAGG 260 (357)
T ss_dssp CEEEEETTEEEEECC
T ss_pred ceEEEECCEEEEEcC
Confidence 112233567666665
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=58.80 E-value=29 Score=43.95 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=82.5
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCCeEEEEEcCCCCEEE
Q 004785 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (730)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~~~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~~~V~sVafSPdG~~LA 207 (730)
...|.|.|+.++..+..-. -.--+.-.+| ..++++--. ..++.|+|+.+...++.+.....|.--.|-. .+.|+
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP-~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis-~~~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVA 120 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCC-CcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecC-CCeeE
Confidence 3478888988865432110 1112355788 667666654 6789999999999888888888888888864 35677
Q ss_pred EEECCeEEEEEcCCCccccCCeEEecC----CCCeEEEEEccCCCeEEEEEe
Q 004785 208 VASGHKLYIWRYNMREETSSPRIVLRT----RRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 208 sgSdd~I~VWDl~t~~~~~~~~~l~~h----~~~V~sVaFSPdG~~Llatgs 255 (730)
..++..|+-|++...... ...+..| ...|..-.-+++.++++..|=
T Consensus 121 lVT~~aVyHW~~~~~s~P--~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi 170 (1630)
T 1xi4_A 121 LVTDNAVYHWSMEGESQP--VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (1630)
T ss_pred EEcCCeEEEeccCCCCcc--HHHHhcchhcccCeeEEeeeCCCCCeEEEEee
Confidence 778888999999653221 1122223 457888888999999887763
No 351
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=52.36 E-value=1.9e+02 Score=28.86 Aligned_cols=127 Identities=8% Similarity=0.067 Sum_probs=66.4
Q ss_pred EEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEEeC----CC-------eEEEEECCCCeEEEE--EecCCCCcEE
Q 004785 93 LHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHG----DH-------TVKIIDCQTGSCLKV--LHGHRRTPWV 154 (730)
Q Consensus 93 IrlWd~~t~~L-----~gH~~~Vt~lafSPDG~~LaSgS~----Dg-------tVrVWDl~tg~~l~~--l~gH~~~V~s 154 (730)
+..||..+.+. ..............++++++.|+. ++ .+.+||..+.+-... +.........
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 105 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGL 105 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEE
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccce
Confidence 56777765521 111112222333457788888873 11 277889877653211 1111111222
Q ss_pred EEEccCCCCEEEEEeCC-------CcEEEEECCCCeEEEEecCCCC--eEEEEEcCCCCEEEEEE--C-----CeEEEEE
Q 004785 155 VRFHPLNPTIIASGSLD-------HEVRLWNASTAECIGSRDFYRP--IASIAFHASGELLAVAS--G-----HKLYIWR 218 (730)
Q Consensus 155 VafSP~dg~lLaSgS~D-------gtVrLWDl~tg~~i~~l~h~~~--V~sVafSPdG~~LAsgS--d-----d~I~VWD 218 (730)
+.+ ++.+++.|+.+ ..+.++|..+.+-...-..... -.+++. .++++++.|+ + +.+.+||
T Consensus 106 ~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 106 GEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp EEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEE
T ss_pred EEE---CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEc
Confidence 223 56777777754 3588899988765544221111 112222 4667666665 1 2389999
Q ss_pred cCCCc
Q 004785 219 YNMRE 223 (730)
Q Consensus 219 l~t~~ 223 (730)
..+.+
T Consensus 182 ~~~~~ 186 (318)
T 2woz_A 182 PKKGD 186 (318)
T ss_dssp TTTTE
T ss_pred CCCCE
Confidence 88765
No 352
>1vqy_A Hypothetical protein AGR_PAT_315; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.40A {Agrobacterium tumefaciens str} SCOP: d.58.4.13
Probab=50.69 E-value=7.6 Score=34.74 Aligned_cols=21 Identities=33% Similarity=0.559 Sum_probs=17.2
Q ss_pred ceEEEEEEEeeeccccchhhh
Q 004785 620 HQVIYELRIYSLEEATFGTVL 640 (730)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~ 640 (730)
|..|||||.|.|...+..+.+
T Consensus 11 ~~~~yElRtY~i~Pg~~~~f~ 31 (116)
T 1vqy_A 11 HHMIVEERIYRIRGGKMQEYL 31 (116)
T ss_dssp -CCEEEEEEEEECTTCHHHHH
T ss_pred ceeEEEEEEEEEcCCCHHHHH
Confidence 789999999999987766665
No 353
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=48.57 E-value=4.9e+02 Score=33.33 Aligned_cols=136 Identities=7% Similarity=0.018 Sum_probs=81.2
Q ss_pred CCCeEEEEeCCCC--C---CCCC----CCCeEEEEECCCCCEEEEEeC-------CCeEEEEECCCCeEEEEEecCCCCc
Q 004785 89 EAESLHHLRPKYC--P---LSPP----PRSTIAAAFSPDGKTLASTHG-------DHTVKIIDCQTGSCLKVLHGHRRTP 152 (730)
Q Consensus 89 ~DgsIrlWd~~t~--~---L~gH----~~~Vt~lafSPDG~~LaSgS~-------DgtVrVWDl~tg~~l~~l~gH~~~V 152 (730)
.+..|..|++... + +.-| ...|..-.-+++.++++..+- .|.+.+|.++.+. .+.+.||.+..
T Consensus 123 T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F 201 (1630)
T 1xi4_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASF 201 (1630)
T ss_pred cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhh
Confidence 3567888888532 1 1122 345888888999998875543 5888999876543 45677887766
Q ss_pred EEEEEc--cCCCCEEEEEeC---CCcEEEEECCCC---eE-E-----EE-ecC---CCCeEEEEEcCCCCEEEEEECCe-
Q 004785 153 WVVRFH--PLNPTIIASGSL---DHEVRLWNASTA---EC-I-----GS-RDF---YRPIASIAFHASGELLAVASGHK- 213 (730)
Q Consensus 153 ~sVafS--P~dg~lLaSgS~---DgtVrLWDl~tg---~~-i-----~~-l~h---~~~V~sVafSPdG~~LAsgSdd~- 213 (730)
..+... +....++..+.. .+.++|-++... .. . .. +.. .+-..++..++.-..++.-+..+
T Consensus 202 ~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~ 281 (1630)
T 1xi4_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (1630)
T ss_pred heeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce
Confidence 555443 212234443333 267888888543 11 0 00 110 12223556666666777777555
Q ss_pred EEEEEcCCCccc
Q 004785 214 LYIWRYNMREET 225 (730)
Q Consensus 214 I~VWDl~t~~~~ 225 (730)
|++||+.++..+
T Consensus 282 ~~~~d~~t~~~i 293 (1630)
T 1xi4_A 282 IHLYDLETGTCI 293 (1630)
T ss_pred EEEEecccchhh
Confidence 999999998764
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=42.73 E-value=1.6e+02 Score=31.68 Aligned_cols=92 Identities=8% Similarity=0.006 Sum_probs=0.0
Q ss_pred eEEEEECCCC--eEEEEEecC------CCCcEEEEEc---cC----CCCEEEEEeCCCcEEEEECCCCeEEEEec---CC
Q 004785 130 TVKIIDCQTG--SCLKVLHGH------RRTPWVVRFH---PL----NPTIIASGSLDHEVRLWNASTAECIGSRD---FY 191 (730)
Q Consensus 130 tVrVWDl~tg--~~l~~l~gH------~~~V~sVafS---P~----dg~lLaSgS~DgtVrLWDl~tg~~i~~l~---h~ 191 (730)
+|.+||+.++ +.++.+.-. ...+..+++. |. ++...++=+.+.-|.++|+.+++..+.+. ..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Q ss_pred C----------------CeEEEEEcCC----CCEEEEEECCeEEEEEcCC
Q 004785 192 R----------------PIASIAFHAS----GELLAVASGHKLYIWRYNM 221 (730)
Q Consensus 192 ~----------------~V~sVafSPd----G~~LAsgSdd~I~VWDl~t 221 (730)
. .+..++++|+ ++.|+...=.+-++|.+.+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T 253 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNT 253 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEH
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEH
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=42.71 E-value=1.6e+02 Score=35.39 Aligned_cols=38 Identities=21% Similarity=0.336 Sum_probs=31.9
Q ss_pred CcEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q 004785 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD 189 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~ 189 (730)
.+.++...+ +..++++-+.|+++|+|++.+++++....
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 355666766 77899999999999999999999988754
No 356
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=38.85 E-value=48 Score=35.19 Aligned_cols=110 Identities=15% Similarity=0.070 Sum_probs=61.5
Q ss_pred CEEEEEeCCCeEEEEeCCCCC----CCCC-CCCeEEEEE--C-CCCCEEEEE-eCCCeEEEEECCCCeEEEEEec----C
Q 004785 82 RGLASWVEAESLHHLRPKYCP----LSPP-PRSTIAAAF--S-PDGKTLAST-HGDHTVKIIDCQTGSCLKVLHG----H 148 (730)
Q Consensus 82 ~~L~Sgs~DgsIrlWd~~t~~----L~gH-~~~Vt~laf--S-PDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~g----H 148 (730)
..++.++.||.|.-+|.++++ +... ..++....- . .++..++.. +.||.|..+|..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 345556666666666665552 1111 111211110 0 133334343 5899999999998865544431 1
Q ss_pred CCCcEE---EEE-cc---CCCCEEEEEeCCCcEEEEECCCCeEEEEecCC
Q 004785 149 RRTPWV---VRF-HP---LNPTIIASGSLDHEVRLWNASTAECIGSRDFY 191 (730)
Q Consensus 149 ~~~V~s---Vaf-SP---~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h~ 191 (730)
..++.. ..+ .+ ..+..+++++.++.+...|+.+|+.+..+...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 111111 000 00 03567889999999999999999999988644
No 357
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=30.97 E-value=6.4e+02 Score=29.27 Aligned_cols=142 Identities=11% Similarity=0.066 Sum_probs=74.8
Q ss_pred CCCeEEEEECCC-CCEEEEEeCCCeEEEEECCCCeEEEEEecC-------CCCcEEEEEccCCCCEEEEEeCCCc----E
Q 004785 107 PRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGSCLKVLHGH-------RRTPWVVRFHPLNPTIIASGSLDHE----V 174 (730)
Q Consensus 107 ~~~Vt~lafSPD-G~~LaSgS~DgtVrVWDl~tg~~l~~l~gH-------~~~V~sVafSP~dg~lLaSgS~Dgt----V 174 (730)
.+.|.+|+++|+ ...++.+...+.|...+ ..|+.-..+..+ ...|..|+++|.+.+.++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 357999999994 46677777777776655 456555554432 2368999999854455555443211 2
Q ss_pred EEE-ECCCCeEEEEecC--------C--CCeEEEEEcCCC-CEEEEEE-CCeEEEEEcCCCccccCCeEEe------cCC
Q 004785 175 RLW-NASTAECIGSRDF--------Y--RPIASIAFHASG-ELLAVAS-GHKLYIWRYNMREETSSPRIVL------RTR 235 (730)
Q Consensus 175 rLW-Dl~tg~~i~~l~h--------~--~~V~sVafSPdG-~~LAsgS-dd~I~VWDl~t~~~~~~~~~l~------~h~ 235 (730)
.|| ....|+.-..... . ..+..++++|.. +.++.+. .+.| |.-..+... ..... ...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~T--W~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKT--WTNVTSIPDAFTNG 168 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSS--CEEETTSCCCCSTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcc--cCCCccCccccCCC
Confidence 333 3333443332211 1 135678888853 4565555 3333 333222110 11111 112
Q ss_pred CCeEEEEEccCC-CeEEEE
Q 004785 236 RSLRAVHFHPHA-APLLLT 253 (730)
Q Consensus 236 ~~V~sVaFSPdG-~~Llat 253 (730)
..+..+.++|.. ..++++
T Consensus 169 ~~~~~i~~~p~~~~~~~~~ 187 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYAS 187 (789)
T ss_dssp TCEEEEEECTTSTTCEEEE
T ss_pred CCeEEEEECCCCCCEEEEE
Confidence 457888998843 344444
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=28.83 E-value=42 Score=41.32 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=32.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEe
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~ 146 (730)
.+.+++..++..+|++-+.|+++||||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566677788999999999999999999999987754
No 359
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=28.44 E-value=5.1e+02 Score=26.70 Aligned_cols=108 Identities=9% Similarity=0.009 Sum_probs=60.0
Q ss_pred CeEEEEECC-C-CCEEEEEeCCCeEEEEECCCCeEEEEEec-------------------CCCCcEEEEEccCCCCEEEE
Q 004785 109 STIAAAFSP-D-GKTLASTHGDHTVKIIDCQTGSCLKVLHG-------------------HRRTPWVVRFHPLNPTIIAS 167 (730)
Q Consensus 109 ~Vt~lafSP-D-G~~LaSgS~DgtVrVWDl~tg~~l~~l~g-------------------H~~~V~sVafSP~dg~lLaS 167 (730)
.|.++++.| + ...|+.+...+-|...+ ..|+....+.. ....+..|.++|.+.+.+..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 578899987 3 55666666666665543 33443333321 12347789998844444444
Q ss_pred EeCCCcEEEEECCCCeEEEEecC--------------CCCeEEEEEcCC-CCEEEEEECCeEEEEE
Q 004785 168 GSLDHEVRLWNASTAECIGSRDF--------------YRPIASIAFHAS-GELLAVASGHKLYIWR 218 (730)
Q Consensus 168 gS~DgtVrLWDl~tg~~i~~l~h--------------~~~V~sVafSPd-G~~LAsgSdd~I~VWD 218 (730)
+..++.|...+- .|+....+.. ...+..+.++|+ ...|+++..+.|+..+
T Consensus 195 g~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~ 259 (394)
T 3b7f_A 195 GMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMD 259 (394)
T ss_dssp EEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEE
T ss_pred EECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeC
Confidence 444444444332 2222222110 134889999996 4677777777766654
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=28.24 E-value=1e+02 Score=35.30 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=36.9
Q ss_pred eEEEEEcCCCCEEEEEECC--------------eEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004785 194 IASIAFHASGELLAVASGH--------------KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (730)
Q Consensus 194 V~sVafSPdG~~LAsgSdd--------------~I~VWDl~t~~~~~~~~~l~~h~~~V~sVaFSPdG~~Llatg 254 (730)
.-.|+|+|+|++++ +.|+ .+.+.+..+++... .........++.++|+||+++|++..
T Consensus 478 PDNL~fd~~G~LwI-~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~r--f~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWI-LTDGDSSNAGDFAGMGNNQMLCADPATGEIRR--FMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEE-EECCCCCCSGGGTTTCSCEEEEECTTTCCEEE--EEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEE-EecCCCcccccccccccceEEEEeCCCCeEEE--EEeCCCCccCcCeeECCCCCEEEEEE
Confidence 35689999999544 4432 14444444554322 22223467899999999999887654
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=27.96 E-value=1.7e+02 Score=33.56 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=42.5
Q ss_pred CcEEEEEccCCCCEEEEEeC------------CCcEEEEECCCCeEEEEec--CCCCeEEEEEcCCCCEEEEEE
Q 004785 151 TPWVVRFHPLNPTIIASGSL------------DHEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~------------DgtVrLWDl~tg~~i~~l~--h~~~V~sVafSPdG~~LAsgS 210 (730)
....|.|.+ ++.+.+.... ...|..+|..+++....+. ....++.++|+||++.|++.-
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456799999 7887774321 1257777877787666553 345789999999999888774
No 362
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=26.48 E-value=6.7e+02 Score=28.95 Aligned_cols=112 Identities=10% Similarity=-0.007 Sum_probs=62.3
Q ss_pred CeEEEE-ECCCCCEEEEE-e----CCCeEEEEECCCCeEEE-EEe-cCCC------CcEEEEEccCCCCEEEEE------
Q 004785 109 STIAAA-FSPDGKTLAST-H----GDHTVKIIDCQTGSCLK-VLH-GHRR------TPWVVRFHPLNPTIIASG------ 168 (730)
Q Consensus 109 ~Vt~la-fSPDG~~LaSg-S----~DgtVrVWDl~tg~~l~-~l~-gH~~------~V~sVafSP~dg~lLaSg------ 168 (730)
....+. ++||+++++.+ | +-..|+++|+.+++.+. .|. .-+. ....++|-. +..++++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEE-TTEEEECCCCSTTC
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEEC-CCEEEEEeCCCCCC
Confidence 345566 88999887655 2 23579999999998763 122 0000 124458875 55555542
Q ss_pred ----eCCCcEEEEECCCCe--EEEEec--CCCCeEEEEEcCCCCE-----EEEEE-C---CeEEEEEcCC
Q 004785 169 ----SLDHEVRLWNASTAE--CIGSRD--FYRPIASIAFHASGEL-----LAVAS-G---HKLYIWRYNM 221 (730)
Q Consensus 169 ----S~DgtVrLWDl~tg~--~i~~l~--h~~~V~sVafSPdG~~-----LAsgS-d---d~I~VWDl~t 221 (730)
+....|+.|.+-+.. -...+. ...-..++..++++++ +++.+ + ..+++.|...
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 278 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKY 278 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSS
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCC
Confidence 123568999887642 222232 2333345556777762 33333 2 2277777654
No 363
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=25.38 E-value=1.5e+02 Score=33.86 Aligned_cols=58 Identities=16% Similarity=0.082 Sum_probs=40.9
Q ss_pred cEEEEEccCCCCEEEEEeCC------------CcEEEEECCCCeEEEEe--cCCCCeEEEEEcCCCCEEEEEE
Q 004785 152 PWVVRFHPLNPTIIASGSLD------------HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVAS 210 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~D------------gtVrLWDl~tg~~i~~l--~h~~~V~sVafSPdG~~LAsgS 210 (730)
.-.|+|+| .+++++.-..+ ..+.+.+..+++....+ .....++.++|+||++.|++.-
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 46799999 78877764332 23556666677765544 3557899999999999887763
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.37 E-value=1.7e+02 Score=33.55 Aligned_cols=60 Identities=13% Similarity=0.285 Sum_probs=38.8
Q ss_pred CeEEEEEcCCCCEEEEEEC-------------CeEEEEEcCCCccccCCeEEec-CCCCeEEEEEccCCCeEEEEEe
Q 004785 193 PIASIAFHASGELLAVASG-------------HKLYIWRYNMREETSSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE 255 (730)
Q Consensus 193 ~V~sVafSPdG~~LAsgSd-------------d~I~VWDl~t~~~~~~~~~l~~-h~~~V~sVaFSPdG~~Llatgs 255 (730)
....|.|+++|.+.+.... +.|+.++..+++... .+.. ....++.++|+||+++|+++..
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~---fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR---FMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEE---EEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEE---EEeCCCCccccCCEECCCCCEEEEEEe
Confidence 4567999999986663321 135566655555322 2222 2457899999999998877653
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=25.33 E-value=52 Score=40.44 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=30.7
Q ss_pred cEEEEEccCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q 004785 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD 189 (730)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~tg~~i~~l~ 189 (730)
+.+++..+ +..++++-+.|+++|+||+.+++++....
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455556 77899999999999999999999988754
No 366
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=24.44 E-value=1e+02 Score=36.19 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=30.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEec
Q 004785 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (730)
Q Consensus 109 ~Vt~lafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g 147 (730)
.|.++.+ +..+|++-+.|+++|+||+++++++....-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3666665 478999999999999999999998877654
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=23.42 E-value=94 Score=36.49 Aligned_cols=30 Identities=10% Similarity=0.304 Sum_probs=26.5
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q 004785 161 NPTIIASGSLDHEVRLWNASTAECIGSRDF 190 (730)
Q Consensus 161 dg~lLaSgS~DgtVrLWDl~tg~~i~~l~h 190 (730)
+..++++-+.|+++|+||+++++++.....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 568999999999999999999998887653
No 368
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis}
Probab=21.89 E-value=13 Score=38.31 Aligned_cols=23 Identities=30% Similarity=0.456 Sum_probs=18.9
Q ss_pred eeccccCCccCC-ccceeeeeeccc
Q 004785 564 VLCSEMGAHFSP-CGRYLVACVACV 587 (730)
Q Consensus 564 ~~~~~~~~~~~~-~~~~~~~~~~~~ 587 (730)
.|+ .=|-|-|+ -|+||+|||-.-
T Consensus 198 ~l~-~Dg~Hps~~~GsYLaA~v~y~ 221 (271)
T 4i8i_A 198 HMN-RDGYHLDLTIGRYTAACTWFE 221 (271)
T ss_dssp CCB-SSSSSBCTTHHHHHHHHHHHH
T ss_pred ccc-CCCCCCCCccCHHHHHHHHHH
Confidence 355 56999999 999999998653
Done!