BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004790
(730 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 150/364 (41%), Gaps = 88/364 (24%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L + +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R FSE ARF
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALD 262
Query: 448 XXH-MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGG 506
H VVYRDLK EN+++ DGHI ++DF L +KT
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-------------- 308
Query: 507 SFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARS 566
FC G P PE++ + R+
Sbjct: 309 -FC--------------------------------------GTPEYLAPEVLEDNDYGRA 329
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+ + G G+ ++E++ G+ PF + ++ +++
Sbjct: 330 VDWWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 366
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRL-GVKRGATEIKQHPFFEGVNWALI--RCSTPP 683
RFP + ++ L+ GLL K+P+ RL G A EI QH FF G+ W + + +PP
Sbjct: 367 RFPRTLGPE--AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 424
Query: 684 EVPR 687
P+
Sbjct: 425 FKPQ 428
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 150/364 (41%), Gaps = 88/364 (24%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L + +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R FSE ARF
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALD 265
Query: 448 XXH-MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGG 506
H VVYRDLK EN+++ DGHI ++DF L +KT
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-------------- 311
Query: 507 SFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARS 566
FC G P PE++ + R+
Sbjct: 312 -FC--------------------------------------GTPEYLAPEVLEDNDYGRA 332
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+ + G G+ ++E++ G+ PF + ++ +++
Sbjct: 333 VDWWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 369
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRL-GVKRGATEIKQHPFFEGVNWALI--RCSTPP 683
RFP + ++ L+ GLL K+P+ RL G A EI QH FF G+ W + + +PP
Sbjct: 370 RFPRTLGPE--AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 427
Query: 684 EVPR 687
P+
Sbjct: 428 FKPQ 431
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 143/348 (41%), Gaps = 85/348 (24%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R F+E ARF
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGS 507
H VVYRD+K EN+++ DGHI ++DF L +KT
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------- 164
Query: 508 FCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSM 567
FC G P PE++ + R++
Sbjct: 165 FC--------------------------------------GTPEYLAPEVLEDNDYGRAV 186
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ G G+ ++E++ G+ PF + ++ +++R
Sbjct: 187 DWWG-----------------------LGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNW 674
FP + S ++ L+ GLL K+P+ RLG A E+ +H FF +NW
Sbjct: 224 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 143/348 (41%), Gaps = 85/348 (24%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R F+E ARF
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 122
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGS 507
H VVYRD+K EN+++ DGHI ++DF L +KT
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------- 167
Query: 508 FCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSM 567
FC G P PE++ + R++
Sbjct: 168 FC--------------------------------------GTPEYLAPEVLEDNDYGRAV 189
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ G G+ ++E++ G+ PF + ++ +++R
Sbjct: 190 DWWG-----------------------LGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNW 674
FP + S ++ L+ GLL K+P+ RLG A E+ +H FF +NW
Sbjct: 227 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 272
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 143/348 (41%), Gaps = 85/348 (24%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R F+E ARF
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGS 507
H VVYRD+K EN+++ DGHI ++DF L +KT
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------- 164
Query: 508 FCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSM 567
FC G P PE++ + R++
Sbjct: 165 FC--------------------------------------GTPEYLAPEVLEDNDYGRAV 186
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ G G+ ++E++ G+ PF + ++ +++R
Sbjct: 187 DWWG-----------------------LGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNW 674
FP + S ++ L+ GLL K+P+ RLG A E+ +H FF +NW
Sbjct: 224 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 149/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ SF
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANSF--- 195
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 196 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 216
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 217 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 256
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 257 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ +F
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANAF--- 192
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 193 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 213
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 214 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 253
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 254 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 149/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ SF
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANSF--- 191
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 192 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 212
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 213 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 252
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 253 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 194
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 195 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 215
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLF-NVVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 216 -------------------DLWALGCIIYQLVAGLPPFR-AGNEGLIFAKIIKLEYDFPE 255
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 256 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 194
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 195 -----------------------------------VGTAQYVSPELLTEKSAXKSS---- 215
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLF-NVVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 216 -------------------DLWALGCIIYQLVAGLPPFR-AGNEGLIFAKIIKLEYDFPE 255
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 256 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 150/357 (42%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 197
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 198 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 218
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDS 631
D W G +++L+ G PF+ +GN +F + +L + D
Sbjct: 219 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKI-IKLEY-DF 256
Query: 632 PATSY-ASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
PA + +RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 257 PAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 313
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 149/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G L L+ + F E RF H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ SF
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANSF--- 194
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A++S
Sbjct: 195 -----------------------------------VGTAQYVSPELLTEKSASKSS---- 215
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 216 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 255
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 256 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 194
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 195 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 215
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 216 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 255
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 256 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 192
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 193 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 213
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 214 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 253
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 254 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 195
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 196 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 216
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 217 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 256
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 257 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 194
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 195 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 215
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 216 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 255
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 256 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 192
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 193 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 213
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 214 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 253
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 254 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 194
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 195 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 215
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 216 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 255
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 256 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 133 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 176
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 177 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 197
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 198 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 237
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 238 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 292
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 126 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 169
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 170 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 190
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 191 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 230
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 231 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 285
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 156 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 199
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 200 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 220
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 221 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 260
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 261 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 315
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 170
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 171 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 191
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 192 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 231
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 232 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 286
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 148 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 191
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 192 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 212
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 213 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 252
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 253 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 148/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 129 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 172
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 173 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 193
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 194 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 233
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 234 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 288
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 147/356 (41%), Gaps = 84/356 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G +V L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 128 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 171
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 172 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 192
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 193 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 232
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPE 684
+RDL+ LLV + RLG + G +K HPFFE V W + TPP+
Sbjct: 233 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPK 286
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 147/357 (41%), Gaps = 84/357 (23%)
Query: 333 FRLLKRLGCGDIGSVYLS-ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
F+ K LG G + L+ EL+++R Y A+K+++K + K+ ER+++ LDHP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREY-AIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
F LY F+ D + Y G+L L+ + F E RF H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+++RDLKPEN+L+ +D HI ++DF T+ + S S++ F
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFG-------------TAKVLSPESKQARANXF--- 192
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
+G PEL+ E +A +S
Sbjct: 193 -----------------------------------VGTAQYVSPELLTEKSACKSS---- 213
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN-VVGQQLRFPD 630
D W G +++L+ G PF+ +GN +F ++ + FP+
Sbjct: 214 -------------------DLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFPE 253
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVK--RGATEIKQHPFFEGVNWALIRCSTPPEV 685
+RDL+ LLV + RLG + G +K HPFFE V W + TPP++
Sbjct: 254 KFFPK--ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
Query: 331 SHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
S F LLK LG G G V+L + S R +AMKV+ KA+L R ++ R + ER+IL
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 83
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
++HPF+ L+ F+T+ L++++ GGDL T ++ F+E +F
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 141
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H LG++YRDLKPEN+L+ ++GHI L+DF LS
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ SF GT EY+APE++ GH + DWW+FG+ + E+L G PF+G + T+ ++
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNWALI--RCST 681
+L P S ++ L+R L + P +RLG G EIK+H FF ++W + R
Sbjct: 243 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 300
Query: 682 PPEVP 686
PP P
Sbjct: 301 PPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
Query: 331 SHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
S F LLK LG G G V+L + S R +AMKV+ KA+L R ++ R + ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 82
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
++HPF+ L+ F+T+ L++++ GGDL T ++ F+E +F
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 140
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H LG++YRDLKPEN+L+ ++GHI L+DF LS
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ SF GT EY+APE++ GH + DWW+FG+ + E+L G PF+G + T+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNWALI--RCST 681
+L P S ++ L+R L + P +RLG G EIK+H FF ++W + R
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 682 PPEVP 686
PP P
Sbjct: 300 PPFKP 304
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
Query: 331 SHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
S F LLK LG G G V+L + S R +AMKV+ KA+L R ++ R + ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 82
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
++HPF+ L+ F+T+ L++++ GGDL T ++ F+E +F
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 140
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H LG++YRDLKPEN+L+ ++GHI L+DF LS
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ SF GT EY+APE++ GH + DWW+FG+ + E+L G PF+G + T+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNWALI--RCST 681
+L P S ++ L+R L + P +RLG G EIK+H FF ++W + R
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 682 PPEVP 686
PP P
Sbjct: 300 PPFKP 304
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 8/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTR----CYFAMKVMDKASLASRKKLTRAQTEREILQ 386
SHF LLK LG G G V+L TR +AMKV+ KA+L R ++ R + ER+IL
Sbjct: 28 SHFELLKVLGQGSFGKVFLVR-KVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILA 85
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
++HPF+ L+ F+T+ L++++ GGDL T ++ F+E +F
Sbjct: 86 DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGL 143
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H LG++YRDLKPEN+L+ ++GHI L+DF LS
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ SF GT EY+APE++ +GH + DWW++G+ + E+L G PF+G + T+ ++
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNWALI--RCST 681
+L P +T ++ L+R L + P +RLG GA EIK+H F+ ++W + R
Sbjct: 246 KLGMPQFLSTE--AQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIK 303
Query: 682 PPEVP 686
PP P
Sbjct: 304 PPFKP 308
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T +FAMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T +FAMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T +FAMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 148/361 (40%), Gaps = 87/361 (24%)
Query: 333 FRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLT-RAQTEREILQLL 388
F LL+ LG G G V+ ++T FAMKV+ KA + K T + ER IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HPF+ L+ + GG L+ + + G
Sbjct: 79 KHPFIVD------------LIYAFQTGGKLYLILEYLSG--------------------- 105
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSF 508
G ++ L+ E + + D L++ ++L +I
Sbjct: 106 ----GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRD--------------- 146
Query: 509 CVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMS 568
++P ++ + Q + K T + GL ++ + + +
Sbjct: 147 ------LKPENIMLNH---------QGHVKLT-----DFGLCKESIHD------GTVTHT 180
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EY+APEI+ GH AVDWW+ G ++++L G PF G + T+ ++ +L
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFEGVNWA--LIRCSTPPEV 685
P P + +RDL++ LL + RLG G A E++ HPFF +NW L R PP
Sbjct: 241 P--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 686 P 686
P
Sbjct: 299 P 299
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 269 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 326
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 327 YQRKVEAPFIPK 338
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +I H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT 617
+A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 618 LFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWAL 676
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 677 I--RCSTPPEVPR 687
I R P +P+
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 147/361 (40%), Gaps = 87/361 (24%)
Query: 333 FRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLT-RAQTEREILQLL 388
F LL+ LG G G V+ ++T FAMKV+ KA + K T + ER IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HPF+ L+ + GG L+ + + G
Sbjct: 79 KHPFIVD------------LIYAFQTGGKLYLILEYLSG--------------------- 105
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSF 508
G ++ L+ E + + D L++ ++L +I
Sbjct: 106 ----GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRD--------------- 146
Query: 509 CVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMS 568
++P ++ + Q + K T + GL ++ + +
Sbjct: 147 ------LKPENIMLNH---------QGHVKLT-----DFGLCKESIHD------GTVTHX 180
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EY+APEI+ GH AVDWW+ G ++++L G PF G + T+ ++ +L
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFEGVNWA--LIRCSTPPEV 685
P P + +RDL++ LL + RLG G A E++ HPFF +NW L R PP
Sbjct: 241 P--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 686 P 686
P
Sbjct: 299 P 299
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ + GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 150
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 241 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 298
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 299 YQRKVEAPFIPK 310
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K +G G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGGD+ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K +G G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGGD+ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT 617
+A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 618 LFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWAL 676
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 677 I--RCSTPPEVPR 687
I R P +P+
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 143
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ + GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 174 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 233
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 234 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 291
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 292 YQRKVEAPFIPK 303
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 95/167 (56%), Gaps = 9/167 (5%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSS---TRCYFAMKVMDKASLASRKKLT-RAQTERE 383
+G+ +F LLK LG G G V+L S T +AMKV+ KA++ + K T +TER+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 384 ILQLLDH-PFLPTLYTHFETDRFSCLVMEYCPGGDLHT-LRQRQPGKHFSEYAARFXXXX 441
+L+ + PFL TL+ F+T+ L+++Y GG+L T L QR+ F+E+ +
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGE 167
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPT 488
H LG++YRD+K EN+L+ +GH++L+DF LS T
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET 214
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 6/139 (4%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEIIKG--EGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
E VA+ T R+ F GT EY+AP+I++G GH AVDWW+ G+ ++ELL G +PF G
Sbjct: 208 EFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
Query: 614 NRATLFNVVGQQLRF--PDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFE 670
+ + + + L+ P S ++DLI+ LL+K+P+ RLG R A EIK+H FF+
Sbjct: 267 EKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326
Query: 671 GVNWALIRCSTPPEVPRPM 689
+NW + P +P+
Sbjct: 327 KINWDDLAAKKVPAPFKPV 345
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K +G G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ F E ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ F E ARF
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 150
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 241 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 298
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 299 YQRKVEAPFIPK 310
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ F E ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ F E ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ F E ARF
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
Query: 323 ARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
A D + M+ F LK LG G G V L +T Y+AMK++ K + ++ ++ TE
Sbjct: 2 AMDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 61
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXX 440
+LQ HPFL L F+T C VMEY GG+L H R+R F+E ARF
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGA 117
Query: 441 XXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H VVYRD+K EN+++ DGHI ++DF L
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 156
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EYLAPE+++ +G AVDWW G+ ++E++ G+ PF + ++ +++RF
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNW 674
P + S ++ L+ GLL K+P+ RLG A E+ +H FF +NW
Sbjct: 230 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 274
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Query: 323 ARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
A D + M+ F LK LG G G V L + +T Y+AMK++ K + ++ ++ TE
Sbjct: 2 AMDPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 61
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXX 440
+LQ HPFL L F+T C VMEY GG+L H R+R FSE ARF
Sbjct: 62 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGA 117
Query: 441 XXXXXXXXXH-MLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H VVYRDLK EN+++ DGHI ++DF L
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EYLAPE+++ +G AVDWW G+ ++E++ G+ PF + ++ +++RF
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRL-GVKRGATEIKQHPFFEGVNWALI--RCSTPPEV 685
P + ++ L+ GLL K+P+ RL G A EI QH FF G+ W + + +PP
Sbjct: 231 PRTLGPE--AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 288
Query: 686 PR 687
P+
Sbjct: 289 PQ 290
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + T ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY PGG++ + R+ G+ F E ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R F+E ARF
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H VVYRD+K EN+++ DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EYLAPE+++ +G AVDWW G+ ++E++ G+ PF + ++ +++RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNW 674
P + S ++ L+ GLL K+P+ RLG A E+ +H FF +NW
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R F+E ARF
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H VVYRD+K EN+++ DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EYLAPE+++ +G AVDWW G+ ++E++ G+ PF + ++ +++RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNW 674
P + S ++ L+ GLL K+P+ RLG A E+ +H FF +NW
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L + +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R FSE ARF
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALD 122
Query: 448 XXH-MLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H VVYRDLK EN+++ DGHI ++DF L
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EYLAPE+++ +G AVDWW G+ ++E++ G+ PF + ++ +++RF
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRL-GVKRGATEIKQHPFFEGVNWALI--RCSTPPEV 685
P + ++ L+ GLL K+P+ RL G A EI QH FF G+ W + + +PP
Sbjct: 229 PRTLGPE--AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 286
Query: 686 PR 687
P+
Sbjct: 287 PQ 288
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL-QLLD 389
S F LK +G G G V L+ + ++A+KV+ K ++ +K+ +ER +L + +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HPFL L+ F+T V++Y GG+L QR+ + F E ARF
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYL 155
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFC 509
H L +VYRDLKPEN+L+ GHI+L+DF L C + T+S +FC
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGL---CKENIEHNSTTS------------TFC 200
Query: 510 VQPACIEPSSVCIQP 524
P + P + QP
Sbjct: 201 GTPEYLAPEVLHKQP 215
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLF-NVVGQQL 626
+F GT EYLAPE++ + + VDWW G L+E+LYG PF S N A ++ N++ + L
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY-SRNTAEMYDNILNKPL 256
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNW--ALIRCSTPPE 684
+ P + ++R L+ GLL K+ RLG K EIK H FF +NW + + TPP
Sbjct: 257 QL--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPF 314
Query: 685 VP 686
P
Sbjct: 315 NP 316
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L + +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R FSE ARF
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALD 123
Query: 448 XXH-MLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H VVYRDLK EN+++ DGHI ++DF L
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EYLAPE+++ +G AVDWW G+ ++E++ G+ PF + ++ +++RF
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRL-GVKRGATEIKQHPFFEGVNWALI--RCSTPPEV 685
P + ++ L+ GLL K+P+ RL G A EI QH FF G+ W + + +PP
Sbjct: 230 PRTLGPE--AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 287
Query: 686 PR 687
P+
Sbjct: 288 PQ 289
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M+ F LK LG G G V L +T Y+AMK++ K + ++ ++ TE +LQ
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
HPFL L F+T C VMEY GG+L H R+R F+E ARF
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAEIVSALE 119
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H VVYRD+K EN+++ DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT EYLAPE+++ +G AVDWW G+ ++E++ G+ PF + ++ +++RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNW 674
P + S ++ L+ GLL K+P+ RLG A E+ +H FF +NW
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ + + GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 209 AKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 269 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 326
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 327 YQRKVEAPFIPK 338
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G + G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT E LAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 144
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 175 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 235 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 292
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 293 YQRKVEAPFIPK 304
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAP II +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++++ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F ++ LG G G V L + T ++AMK++DK + K++ E+ I Q ++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +V+EY PGG++ + R+ G+ FSE ARF
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 249 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ FSE ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+++ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ F+E ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FAEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ F E ARF
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 178
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 269 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 326
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 327 YQRKVEAPFIPK 338
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ F E ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ F E ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ F E ARF
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 248 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F +K LG G G V L + + ++AMK++DK + K++ E+ ILQ ++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
PFL L F+ + +VMEY GG++ + R+ G+ F E ARF
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 152
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
H L ++YRDLKPEN+L+ G+I ++DF + R
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
A+ R+ GT EYLAPEII +G+ AVDWW G+ ++E+ G PF
Sbjct: 183 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI 677
+V ++RFP ++ +DL+R LL + R G +K G +IK H +F +W I
Sbjct: 243 EKIVSGKVRFPSHFSSDL--KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 300
Query: 678 --RCSTPPEVPR 687
R P +P+
Sbjct: 301 YQRKVEAPFIPK 312
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL-Q 386
LG+ F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
+HPFL L++ F+T+ V+EY GGDL QRQ + E ARF
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 134
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H G++YRDLK +NVL+ +GHI L+D+
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 165
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 16/141 (11%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGN--------RATLFN 620
F GT Y+APEI++GE +G +VDWW G+ + E++ G++PF G+ LF
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
Query: 621 VV-GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGV--KRGATEIKQHPFFEGVNWALI 677
V+ +Q+R P S + AS +++ L K+P+ RLG + G +I+ HPFF V+W ++
Sbjct: 241 VILEKQIRIPRSMSVKAAS--VLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMM 298
Query: 678 RCSTPPEVPRPMEAELPGKFG 698
+V P + + G+FG
Sbjct: 299 E---QKQVVPPFKPNISGEFG 316
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL-Q 386
LG+ F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
+HPFL L++ F+T+ V+EY GGDL QRQ + E ARF
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 119
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H G++YRDLK +NVL+ +GHI L+D+
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 150
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 16/141 (11%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGN--------RATLFN 620
F GT Y+APEI++GE +G +VDWW G+ + E++ G++PF G+ LF
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 225
Query: 621 VV-GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGV--KRGATEIKQHPFFEGVNWALI 677
V+ +Q+R P S + AS +++ L K+P+ RLG + G +I+ HPFF V+W ++
Sbjct: 226 VILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 283
Query: 678 RCSTPPEVPRPMEAELPGKFG 698
+V P + + G+FG
Sbjct: 284 E---QKQVVPPFKPNISGEFG 301
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL-Q 386
LG+ F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
+HPFL L++ F+T+ V+EY GGDL QRQ + E ARF
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 123
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H G++YRDLK +NVL+ +GHI L+D+
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 154
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 16/141 (11%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGN--------RATLFN 620
F GT Y+APEI++GE +G +VDWW G+ + E++ G++PF G+ LF
Sbjct: 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
Query: 621 VV-GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGV--KRGATEIKQHPFFEGVNWALI 677
V+ +Q+R P S + AS +++ L K+P+ RLG + G +I+ HPFF V+W ++
Sbjct: 230 VILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 287
Query: 678 RCSTPPEVPRPMEAELPGKFG 698
+V P + + G+FG
Sbjct: 288 EQK---QVVPPFKPNISGEFG 305
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL-Q 386
LG+ F LL+ +G G V L L T +AM+V+ K + + + QTE+ + Q
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
+HPFL L++ F+T+ V+EY GGDL QRQ + E ARF
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 166
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H G++YRDLK +NVL+ +GHI L+D+ +
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 16/142 (11%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGN--------RATLF 619
+F GT Y+APEI++GE +G +VDWW G+ + E++ G++PF G+ LF
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271
Query: 620 NVV-GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGV--KRGATEIKQHPFFEGVNWAL 676
V+ +Q+R P S + AS +++ L K+P+ RLG + G +I+ HPFF V+W +
Sbjct: 272 QVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 329
Query: 677 IRCSTPPEVPRPMEAELPGKFG 698
+ +V P + + G+FG
Sbjct: 330 ME---QKQVVPPFKPNISGEFG 348
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Query: 304 ANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKV 363
A + + +W + +R ++ L F +LK +G G V + ++ T +AMK+
Sbjct: 34 AQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKI 93
Query: 364 MDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQ 423
M+K + R +++ + ER++L D ++ L+ F+ + + LVMEY GGDL TL
Sbjct: 94 MNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLS 153
Query: 424 RQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRC 483
+ G+ ARF H LG V+RD+KP+N+L+ GHI L+DF L+
Sbjct: 154 KF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212
Query: 484 AVSPTL 489
T+
Sbjct: 213 RADGTV 218
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 564 ARSMSFVGTHEYLAPEIIKGEGHGSA-------VDWWTFGIFLHELLYGKTPFKGSGNRA 616
RS+ VGT +YL+PEI++ G G DWW G+F +E+ YG+TPF
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
Query: 617 TLFNVV--GQQLRFP-DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN 673
T +V + L P +RD I+ LL P+ RLG + GA + + HPFF G++
Sbjct: 278 TYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGLD 335
Query: 674 WALIRCSTPPEVP 686
W +R S PP P
Sbjct: 336 WDGLRDSVPPFTP 348
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 322 RARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTE 381
+ RD + + ++K +G G G V L STR +AMK++ K + R E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 382 REILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXX 441
R+I+ + P++ L+ F+ DR+ +VMEY PGGDL L E ARF
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAE 181
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H +G ++RD+KP+N+L+ GH+ L+DF
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 570 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T ++ +
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 626 --LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWAL--IRCST 681
L FPD S +++LI L + + RLG + G EIK+H FF+ WA +R +
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 682 PPEVP 686
P VP
Sbjct: 353 APVVP 357
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 322 RARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTE 381
+ RD + + ++K +G G G V L STR +AMK++ K + R E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 382 REILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXX 441
R+I+ + P++ L+ F+ DR+ +VMEY PGGDL L E ARF
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAE 176
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H +G ++RD+KP+N+L+ GH+ L+DF
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 212
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 570 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T ++ +
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
Query: 626 --LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWAL--IRCST 681
L FPD S +++LI L + + RLG + G EIK+H FF+ WA +R +
Sbjct: 290 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 347
Query: 682 PPEVP 686
P VP
Sbjct: 348 APVVP 352
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 322 RARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTE 381
+ RD + + ++K +G G G V L STR +AMK++ K + R E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 382 REILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXX 441
R+I+ + P++ L+ F+ DR+ +VMEY PGGDL L E ARF
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAE 181
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H +G ++RD+KP+N+L+ GH+ L+DF
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 570 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T ++ +
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 626 --LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWAL--IRCST 681
L FPD S +++LI L + + RLG + G EIK+H FF+ WA +R +
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 682 PPEVP 686
P VP
Sbjct: 353 APVVP 357
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
+ HF +L+ +G G G V + + + T+ +AMK M+K R ++ E +I+Q
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HPFL L+ F+ + +V++ GGDL Q HF E +
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKEETVKLFICELVMALD 129
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSL---------DSD 498
+++RD+KP+N+L+ + GH+ ++DF+++ A+ P + +++ +
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA---AMLPRETQITTMAGTKPYMAPEMF 186
Query: 499 PSRRGPGGSFCV 510
SR+G G SF V
Sbjct: 187 SSRKGAGYSFAV 198
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 561 PTAARSMSFVGTHEYLAPEII---KGEGHGSAVDWWTFGIFLHELLYGKTPFK---GSGN 614
P + + GT Y+APE+ KG G+ AVDWW+ G+ +ELL G+ P+ + +
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 615 RATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNW 674
+ + + +P + + S L++ LL P R ++++ P+ +NW
Sbjct: 226 KEIVHTFETTVVTYPSAWSQEMVS--LLKKLLEPNPDQRFS---QLSDVQNFPYMNDINW 280
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
LG+ +F ++ LG G G V L+ + T +A+KV+ K + + TE+ IL L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 388 L-DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
+HPFL L+ F+T VME+ GGDL + Q + F E ARF
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H G++YRDLK +NVL+ +GH L+DF +
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 170
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 566 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
+ +F GT +Y+APEI++ +G AVDWW G+ L+E+L G PF+ ++ +
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE 240
Query: 626 LRFPDSPATSYASRD---LIRGLLVKEPQHRLG--VKRGATEIKQHPFFEGVNWALI--R 678
+ +P ++ D +++ + K P RLG + G I +HPFF+ ++WA + R
Sbjct: 241 VVYP-----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHR 295
Query: 679 CSTPPEVPR 687
PP PR
Sbjct: 296 QIEPPFRPR 304
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ F++L+ LG G G V+L Y+AMKV+ K + K++ ER +L ++
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HPF+ ++ F+ + ++M+Y GG+L +L ++ + F A+F
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYL 122
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDF-------DLSLRCAVSPTLIKTSSLDSDPSRR 502
H ++YRDLKPEN+L+ +GHI ++DF D++ +P I + + P +
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNK 182
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPD 630
GT +Y+APE++ + + ++DWW+FGI ++E+L G TPF S T ++ +LRFP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 631 SPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALI---RCSTPPEVP 686
P + +DL+ L+ ++ RLG ++ G ++K HP+F+ V W + TP E P
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPP 282
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 564 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
A++ F GT +Y+APEI+ G+ + +VDWW+FG+ L+E+L G++PF G ++
Sbjct: 174 AKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 233
Query: 624 QQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNW 674
+P ++DL+ L V+EP+ RLGV RG +I+QHP F +NW
Sbjct: 234 DNPFYP--RWLEKEAKDLLVKLFVREPEKRLGV-RG--DIRQHPLFREINW 279
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
L + F L K LG G G V+L+E T +FA+K + K + + E+ +L L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 388 -LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
+HPFL ++ F+T VMEY GGDL + Q F A F
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H G+VYRDLK +N+L+ DGHI ++DF
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADF 163
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 564 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
A++ F GT +Y+APEI+ G+ + +VDWW+FG+ L+E+L G++PF G ++
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
Query: 624 QQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNW 674
+P ++DL+ L V+EP+ RLGV RG +I+QHP F +NW
Sbjct: 233 DNPFYP--RWLEKEAKDLLVKLFVREPEKRLGV-RG--DIRQHPLFREINW 278
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
L + F L K LG G G V+L+E T +FA+K + K + + E+ +L L
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 388 -LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
+HPFL ++ F+T VMEY GGDL + Q F A F
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H G+VYRDLK +N+L+ DGHI ++DF
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADF 162
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 90/196 (45%), Gaps = 18/196 (9%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
++ F L LG G G V L++ T +A+K++ K + + E+ +L LLD
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 390 HP-FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
P FL L++ F+T VMEY GGDL +Q GK F E A F
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDL-MYHIQQVGK-FKEPQAVFYAAEISIGLFF 135
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSF 508
H G++YRDLK +NV++ +GHI ++DF + K +D +R F
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC----------KEHMMDGVTTR-----EF 180
Query: 509 CVQPACIEPSSVCIQP 524
C P I P + QP
Sbjct: 181 CGTPDYIAPEIIAYQP 196
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT +Y+APEII + +G +VDWW +G+ L+E+L G+ PF G +++ +
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS 238
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNWALI--RCSTPPE 684
+P S + S + +GL+ K P RLG G ++++H FF ++W + R PP
Sbjct: 239 YPKSLSKEAVS--ICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPF 296
Query: 685 VPR 687
P+
Sbjct: 297 KPK 299
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 315 WKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKK 374
W + + L F +LK +G G G V + +L + FAMK+++K + R +
Sbjct: 58 WAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAE 117
Query: 375 LTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYA 434
+ ER++L D ++ TL+ F+ D LVM+Y GGDL TL + + E
Sbjct: 118 TACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEM 176
Query: 435 ARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLR 482
ARF H L V+RD+KP+N+L+ +GHI L+DF L+
Sbjct: 177 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLHELLYGKTPFKGS 612
+ E +S VGT +Y++PEI++ G+G +G DWW+ G+ ++E+LYG+TPF
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 613 GNRATLFNVVGQQLRFP---DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
T ++ + RF S ++DLIR L+ +HRLG + G + K+HPFF
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLG-QNGIEDFKKHPFF 342
Query: 670 EGVNWALIR-CSTP--PEVPRPMEA 691
G++W IR C P PEV P +
Sbjct: 343 SGIDWDNIRNCEAPYIPEVSSPTDT 367
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT +Y+APEII + +G +VDWW FG+ L+E+L G+ PF+G +++ + +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNWALI--RCSTPPEV 685
P S + + + +GL+ K P RLG G +IK+H FF ++W + + PP
Sbjct: 562 PKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 619
Query: 686 PR 687
P+
Sbjct: 620 PK 621
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
+ ++ F L LG G G V LSE T +A+K++ K + + E+ +L L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 388 LDHP-FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
P FL L++ F+T VMEY GGDL + Q F E A F
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGL 455
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGG 506
G++YRDLK +NV++ +GHI ++DF + K + D ++
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADF----------GMCKENIWDGVTTK----- 500
Query: 507 SFCVQPACIEPSSVCIQP 524
FC P I P + QP
Sbjct: 501 XFCGTPDYIAPEIIAYQP 518
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT +Y+APEII + +G +VDWW FG+ L+E+L G+ PF+G +++ + +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVK-RGATEIKQHPFFEGVNWALI--RCSTPPEV 685
P S + + + +GL+ K P RLG G +IK+H FF ++W + + PP
Sbjct: 241 PKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 298
Query: 686 PR 687
P+
Sbjct: 299 PK 300
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
+ ++ F L LG G G V LSE T +A+K++ K + + E+ +L L
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 388 LDHP-FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
P FL L++ F+T VMEY GGDL + Q F E A F
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGL 134
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGG 506
G++YRDLK +NV++ +GHI ++DF + K + D ++
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC----------KENIWDGVTTK----- 179
Query: 507 SFCVQPACIEPSSVCIQP 524
FC P I P + QP
Sbjct: 180 XFCGTPDYIAPEIIAYQP 197
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++K +G G G V L +++ +AMK++ K + R ER+I+ + P+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ L+ F+ D++ +VMEY PGGDL L E A+F H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNL---MSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDF 477
G+++RD+KP+N+L+ GH+ L+DF
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADF 218
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 570 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
VGT +Y++PE++K +G +G DWW+ G+FL E+L G TPF T ++ +
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 626 --LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG--VNWALIRCST 681
L FP+ S +++LI L + + RLG + G EIKQHPFF+ NW IR +
Sbjct: 296 NSLCFPEDAEISKHAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 682 PPEVP 686
P VP
Sbjct: 354 APVVP 358
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F ++K +G G G V + ++ +T +AMK+++K + R + + ER++L D +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ L+ F+ + LVM+Y GGDL TL + K E ARF H L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 210
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLR 482
V+RD+KP+NVL+ +GHI L+DF L+
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLK 240
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 570 VGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
VGT +Y++PEI++ G G +G DWW+ G+ ++E+LYG+TPF T ++
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 625 QLRFP---DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCST 681
+ RF S ++DLI+ L+ + RLG + G + K+H FFEG+NW IR
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQRLICSR-ERRLG-QNGIEDFKKHAFFEGLNWENIRNLE 370
Query: 682 PPEVP 686
P +P
Sbjct: 371 APYIP 375
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F ++K +G G G V + ++ +T +AMK+++K + R + + ER++L D +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ L+ F+ + LVM+Y GGDL TL + K E ARF H L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 194
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLR 482
V+RD+KP+NVL+ +GHI L+DF L+
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLK 224
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 570 VGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
VGT +Y++PEI++ G G +G DWW+ G+ ++E+LYG+TPF T ++
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 625 QLRFP---DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCST 681
+ RF S ++DLI+ L+ + RLG + G + K+H FFEG+NW IR
Sbjct: 297 EERFQFPSHVTDVSEEAKDLIQRLICSR-ERRLG-QNGIEDFKKHAFFEGLNWENIRNLE 354
Query: 682 PPEVP 686
P +P
Sbjct: 355 APYIP 359
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 15/149 (10%)
Query: 545 SELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLY 604
S+LGL EL A T ++ + GT ++APE++ GE + +VD++ G+ L+E++
Sbjct: 331 SDLGLAV----ELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
Query: 605 GKTPFKGSG----NRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGA 660
+ PF+ G N+ V+ Q + +PD S AS+D LL K+P+ RLG + G+
Sbjct: 385 ARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 661 TE-IKQHPFFEGVNWALIRCS--TPPEVP 686
+ ++ HP F ++W + TPP VP
Sbjct: 443 CDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
+G F + LG G G V+ ++ +T +A K ++K L RK A E++IL
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGD----LHTLRQRQPGKHFSEYAARFXXXXXX 443
+ F+ +L FET CLVM GGD ++ + + PG F E A F
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIV 299
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRG 503
H ++YRDLKPENVL+ DDG++ +SD L++ T KT P
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMA 357
Query: 504 P 504
P
Sbjct: 358 P 358
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 15/149 (10%)
Query: 545 SELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLY 604
S+LGL EL A T ++ + GT ++APE++ GE + +VD++ G+ L+E++
Sbjct: 331 SDLGLAV----ELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
Query: 605 GKTPFKGSG----NRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGA 660
+ PF+ G N+ V+ Q + +PD S AS+D LL K+P+ RLG + G+
Sbjct: 385 ARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 661 TE-IKQHPFFEGVNWALIRCS--TPPEVP 686
+ ++ HP F ++W + TPP VP
Sbjct: 443 CDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
+G F + LG G G V+ ++ +T +A K ++K L RK A E++IL
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGD----LHTLRQRQPGKHFSEYAARFXXXXXX 443
+ F+ +L FET CLVM GGD ++ + + PG F E A F
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIV 299
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRG 503
H ++YRDLKPENVL+ DDG++ +SD L++ T KT P
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMA 357
Query: 504 P 504
P
Sbjct: 358 P 358
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 15/149 (10%)
Query: 545 SELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLY 604
S+LGL EL A T ++ + GT ++APE++ GE + +VD++ G+ L+E++
Sbjct: 331 SDLGLAV----ELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
Query: 605 GKTPFKGSG----NRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGA 660
+ PF+ G N+ V+ Q + +PD S AS+D LL K+P+ RLG + G+
Sbjct: 385 ARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 661 TE-IKQHPFFEGVNWALIRCS--TPPEVP 686
+ ++ HP F ++W + TPP VP
Sbjct: 443 CDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
+G F + LG G G V+ ++ +T +A K ++K L RK A E++IL
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGD----LHTLRQRQPGKHFSEYAARFXXXXXX 443
+ F+ +L FET CLVM GGD ++ + + PG F E A F
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIV 299
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRG 503
H ++YRDLKPENVL+ DDG++ +SD L++ T KT P
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMA 357
Query: 504 P 504
P
Sbjct: 358 P 358
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 15/149 (10%)
Query: 545 SELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLY 604
S+LGL EL A T ++ + GT ++APE++ GE + +VD++ G+ L+E++
Sbjct: 331 SDLGLAV----ELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA 384
Query: 605 GKTPFKGSG----NRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGA 660
+ PF+ G N+ V+ Q + +PD S AS+D LL K+P+ RLG + G+
Sbjct: 385 ARGPFRARGEKVENKELKQRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGS 442
Query: 661 TE-IKQHPFFEGVNWALIRCS--TPPEVP 686
+ ++ HP F ++W + TPP VP
Sbjct: 443 CDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
+G F + LG G G V+ ++ +T +A K ++K L RK A E++IL
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGD----LHTLRQRQPGKHFSEYAARFXXXXXX 443
+ F+ +L FET CLVM GGD ++ + + PG F E A F
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG--FQEPRAIFYTAQIV 299
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRG 503
H ++YRDLKPENVL+ DDG++ +SD L++ T KT P
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMA 357
Query: 504 P 504
P
Sbjct: 358 P 358
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 570 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPF-------KGSGNRATLFNV 621
VGTH Y+APE++ KG + S+ DW++ G L +LL G +PF K +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 622 VGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALIRCS 680
V PDS S R L+ GLL ++ RLG + RGA E+K+ PFF ++W ++
Sbjct: 411 V----ELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 681 T--PPEVP 686
PP +P
Sbjct: 465 KYPPPLIP 472
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
L M+ F + + +G G G VY + T +AMK +DK + ++ T A ER +L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 388 L---DHPFLPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
+ D PF+ + F T D+ S +++ GGDLH Q G FSE RF
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHGV-FSEADMRFYAAEII 302
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H VVYRDLKP N+L+ + GH+ +S DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 570 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPF-------KGSGNRATLFNV 621
VGTH Y+APE++ KG + S+ DW++ G L +LL G +PF K +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 622 VGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALIRCS 680
V PDS S R L+ GLL ++ RLG + RGA E+K+ PFF ++W ++
Sbjct: 411 V----ELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 681 T--PPEVP 686
PP +P
Sbjct: 465 KYPPPLIP 472
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
L M+ F + + +G G G VY + T +AMK +DK + ++ T A ER +L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 388 L---DHPFLPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
+ D PF+ + F T D+ S +++ GGDLH Q G FSE RF
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHGV-FSEADMRFYAAEII 302
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H VVYRDLKP N+L+ + GH+ +S DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 570 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPF-------KGSGNRATLFNV 621
VGTH Y+APE++ KG + S+ DW++ G L +LL G +PF K +R TL
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 622 VGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALIRCS 680
V PDS S R L+ GLL ++ RLG + RGA E+K+ PFF ++W ++
Sbjct: 410 V----ELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 463
Query: 681 T--PPEVP 686
PP +P
Sbjct: 464 KYPPPLIP 471
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
L M+ F + + +G G G VY + T +AMK +DK + ++ T A ER +L L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 388 L---DHPFLPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
+ D PF+ + F T D+ S +++ GGDLH Q G FSE RF
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHGV-FSEADMRFYAAEII 301
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H VVYRDLKP N+L+ + GH+ +S DL L C S
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 342
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 570 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPF-------KGSGNRATLFNV 621
VGTH Y+APE++ KG + S+ DW++ G L +LL G +PF K +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 622 VGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLG-VKRGATEIKQHPFFEGVNWALIRCS 680
V PDS S R L+ GLL ++ RLG + RGA E+K+ PFF ++W ++
Sbjct: 411 V----ELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 681 T--PPEVP 686
PP +P
Sbjct: 465 KYPPPLIP 472
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
L M+ F + + +G G G VY + T +AMK +DK + ++ T A ER +L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 388 L---DHPFLPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
+ D PF+ + F T D+ S +++ GGDLH Q G FSE RF
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHGV-FSEADMRFYAAEII 302
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H VVYRDLKP N+L+ + GH+ +S DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 127/335 (37%), Gaps = 90/335 (26%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQL 387
+ ++RLLK +G G+ V L+ T A+K++DK L S +KL R E I+++
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKI 70
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L+ ET++ L+MEY GG++ E AR
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQ 128
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGS 507
H +V+RDLK EN+L+ D +I ++DF S V G +
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG----------------GKLDA 172
Query: 508 FCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSM 567
FC G P PEL
Sbjct: 173 FC--------------------------------------GAPPYAAPEL---------- 184
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F G +Y PE+ D W+ G+ L+ L+ G PF G + V+ + R
Sbjct: 185 -FQGK-KYDGPEV----------DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 232
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATE 662
P +T +L++ LV P +KRG E
Sbjct: 233 IPFYMSTD--CENLLKRFLVLNP-----IKRGTLE 260
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 132/363 (36%), Gaps = 111/363 (30%)
Query: 302 GSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAM 361
GS +PH GN +RLLK +G G+ V L+ T A+
Sbjct: 4 GSDEQPHIGN---------------------YRLLKTIGKGNFAKVKLARHILTGREVAI 42
Query: 362 KVMDKASL--ASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLH 419
K++DK L S +KL R E I+++L+HP + L+ ET++ L+MEY GG++
Sbjct: 43 KIIDKTQLNPTSLQKLFR---EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 99
Query: 420 TLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
E AR H +V+RDLK EN+L+ D +I ++DF
Sbjct: 100 DYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF 157
Query: 480 SLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQPACIEPSSVCIQPACFIPRIFPQKNKKK 539
S V G +FC
Sbjct: 158 SNEFTVG----------------GKLDTFC------------------------------ 171
Query: 540 TRKPRSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFL 599
G P PEL F G +Y PE+ D W+ G+ L
Sbjct: 172 --------GSPPYAAPEL-----------FQGK-KYDGPEV----------DVWSLGVIL 201
Query: 600 HELLYGKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRG 659
+ L+ G PF G + V+ + R P +T +L++ LV P +KRG
Sbjct: 202 YTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD--CENLLKRFLVLNP-----IKRG 254
Query: 660 ATE 662
E
Sbjct: 255 TLE 257
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
VGT Y+APE++K E + + DWW G L+E++ G++PF+ + V P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 630 DSPATSYA--SRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFEGVNWALIRCST--PPE 684
+ + ++ +R L LL K+P RLG + G A E+K+HP F+ +N+ + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 685 VPRP 688
P P
Sbjct: 466 KPDP 469
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
FR + LG G G V ++ +T +A K ++K + RK A E++IL+ ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ +L +ET CLV+ GGDL H Q G F E A F H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSL 481
+VYRDLKPEN+L+ D GHI +SD L++
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
VGT Y+APE++K E + + DWW G L+E++ G++PF+ + V P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 630 DSPATSYA--SRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFEGVNWALIRCST--PPE 684
+ + ++ +R L LL K+P RLG + G A E+K+HP F+ +N+ + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 685 VPRP 688
P P
Sbjct: 466 KPDP 469
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
FR + LG G G V ++ +T +A K ++K + RK A E++IL+ ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ +L +ET CLV+ GGDL H Q G F E A F H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSL 481
+VYRDLKPEN+L+ D GHI +SD L++
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 320 AIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQ 379
A+ ++ + F + + LG G G+VYL+ ++ A+KV+ KA L + +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E EI L HP + LY +F L++EY P G+++ ++ Q F E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYI 119
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLP 179
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 149
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 200
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 186 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 246 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 286
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 320 AIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQ 379
A+ ++ + F + + LG G G+VYL+ ++ A+KV+ KA L + +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E EI L HP + LY +F L++EY P G+++ ++ Q F E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYI 119
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 264
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 320 AIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQ 379
A+ ++ + F + + LG G G+VYL+ ++ A+KV+ KA L + +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E EI L HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYI 119
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 264
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F++ LG G VY +E T A+K++DK ++ + R Q E +I L HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ LY +FE + LV+E C G+++ + + K FSE AR H
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH 131
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+++RDL N+L+ + +I ++DF L+
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLA 159
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
+ + GT Y++PEI HG D W+ G + LL G+ PF + TL VV
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S ++DLI LL + P RL + + + HPF
Sbjct: 228 DYEMP--SFLSIEAKDLIHQLLRRNPADRLSL----SSVLDHPFM 266
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
++ +K+LG G G V L + T A+K++ K+S+ + E +L+ LDHP
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLH---TLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
+ LY FE R LVME GG+L LRQ+ FSE A
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 137
Query: 450 HMLGVVYRDLKPENVLVRD---DGHIMLSDFDLS 480
H +V+RDLKPEN+L+ D I + DF LS
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE+++ + + D W+ G+ L+ LL G PF G ++ L V + F
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCS 680
PD S ++ L++ +L EP R+ A E HP W + CS
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRI----SAEEALNHP------WIVKFCS 285
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 140
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 191
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 177 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 236
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 237 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 277
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
++ +K+LG G G V L + T A+K++ K+S+ + E +L+ LDHP
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLH---TLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
+ LY FE R LVME GG+L LRQ+ FSE A
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 120
Query: 450 HMLGVVYRDLKPENVLVRD---DGHIMLSDFDLS 480
H +V+RDLKPEN+L+ D I + DF LS
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE+++ + + D W+ G+ L+ LL G PF G ++ L V + F
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCS 680
PD S ++ L++ +L EP R+ A E HP W + CS
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRI----SAEEALNHP------WIVKFCS 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ +++ A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 174
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS 219
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 174
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 160 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 128
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 165 SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPXLR----EVLEHPW 264
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREIL 385
L + ++RLLK +G G+ V L+ T A+K++DK L +S +KL R E I+
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIM 60
Query: 386 QLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
++L+HP + L+ ET++ LVMEY GG++ E A+F
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF--RQIVSA 118
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 119 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 568 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G + V+ +
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHR 653
R P +T +L++ L+ P R
Sbjct: 224 RIPFYMSTD--CENLLKKFLILNPSKR 248
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQL 387
+ ++RLLK +G G+ V L+ T A+K++DK L +S +KL R E I+++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L+ ET++ LVMEY GG++ E AR
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFRQIVSAVQ 127
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 568 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G + V+ +
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHR 653
R P +T +L++ L+ P R
Sbjct: 231 RIPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 177
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 163 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQL 387
+ ++RLLK +G G+ V L+ T A+K++DK L +S +KL R E I+++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L+ ET++ LVMEY GG++ E AR
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFRQIVSAVQ 127
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 568 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+F G Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G + V+ +
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHR 653
R P +T +L++ L+ P R
Sbjct: 231 RIPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 262
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S S + +LD P
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLP 175
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 161 SSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 221 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 260
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQL 387
+ ++RLLK +G G+ V L+ T A+K++DK L +S +KL R E I+++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L+ ET++ LVMEY GG++ E AR
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFRQIVSAVQ 127
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 568 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G + V+ +
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHR 653
R P +T +L++ L+ P R
Sbjct: 231 RIPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 127
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 223
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 224 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 125
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 176
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 162 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 222 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 261
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 174
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 160 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 122
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 173
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 159 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 218
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 219 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLP 174
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 160 SSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLP 174
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 160 SSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 259
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 149
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSL 481
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 182
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 186 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 246 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 286
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 174
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 259
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQL 387
+ ++RL K +G G+ V L+ T A+K++DK L S +KL R E I+++
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR---EVRIMKI 70
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L+ ET++ LVMEY GG++ E AR
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFRQIVSAVQ 128
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTL 489
H +V+RDLK EN+L+ D +I ++DF S V L
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL 170
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 568 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G + V+ +
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 627 RFP 629
R P
Sbjct: 232 RIP 234
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 262
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 177
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 163 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 262
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
++ +K+LG G G V L T A+K++ K S+++ ++ E +L+LLDHP
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVLKLLDHPN 97
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDL-----HTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
+ LY FE R LVME GG+L H ++ F+E A
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-------FNEVDAAVIIKQVLSGVT 150
Query: 448 XXHMLGVVYRDLKPENVLV---RDDGHIMLSDFDLS 480
H +V+RDLKPEN+L+ D I + DF LS
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE+++ + + D W+ G+ L LL G PF G ++ L V + F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
P+ S ++DLI+ +L + Q R+ ++ +HP+ +
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL----EHPWIK 296
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQL 387
+ ++RLLK +G G+ V L+ T A++++DK L +S +KL R E I+++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L+ ET++ LVMEY GG++ E AR
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFRQIVSAVQ 127
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 568 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G + V+ +
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHR 653
R P +T +L++ L+ P R
Sbjct: 231 RIPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQL 387
+ ++RLLK +G G+ V L+ T A++++DK L +S +KL R E I+++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L+ ET++ LVMEY GG++ E AR
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEARAKFRQIVSAVQ 127
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 569 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G + V+ + R
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHR 653
P +T +L++ L+ P R
Sbjct: 232 IPFYMSTD--CENLLKKFLILNPSKR 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 221 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLP 175
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 161 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 221 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 128
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 179
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 165 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 264
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 220 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 125
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + +++F S+ S +LD P
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLP 176
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 162 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 222 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 261
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ ++ L + +G G V L+ T A+K+MDK +L S L R +TE E L+ L
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLR 66
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
H + LY ET +V+EYCPGG+L Q SE R
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYV 124
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H G +RDLKPEN+L + + L DF L
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 557 LVAEPTAARSMSF---VGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGS 612
L A+P + G+ Y APE+I+G+ + GS D W+ GI L+ L+ G PF
Sbjct: 154 LCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD 213
Query: 613 GNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
A ++ + P + S S L++ +L +P+ R+ +K + HP+
Sbjct: 214 NVMALYKKIMRGKYDVPKWLSPS--SILLLQQMLQVDPKKRISMK----NLLNHPWI 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ + A+KV+ KA L + + E EI L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 120
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + ++DF S+ S +LD P
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 171
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 157 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 216
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 217 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 256
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G+VYL+ ++ A+KV+ K L + + E EI L HP + LY
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
+F L++EY P G ++ R+ Q F E H V++RD
Sbjct: 80 YFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 459 LKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
+KPEN+L+ +G + ++DF S+ S +LD P
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L G PF+ + T +
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
+ FPD + +RDLI LL RL + E+ +HP+ +
Sbjct: 224 RVEFTFPD--FVTEGARDLISRLLKHNASQRLTL----AEVLEHPWIKA 266
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
H V++RD+KPEN+L+ G + +++F S+ S +LD P
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLP 177
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
+ F + + LG G G+VYL+ ++ A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + LY +F L++EY P G ++ R+ Q F E
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSL 481
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R GT +YL PE+I+G H VD W+ G+ +E L GK PF+ + + T +
Sbjct: 163 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ FPD + +RDLI LL P R ++ E+ +HP+
Sbjct: 223 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPW 262
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 122/344 (35%), Gaps = 94/344 (27%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL--QLLDH 390
+ L+K +G G+ G L A+K ++ R + +REI+ + L H
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + T +VMEY GG+L R G+ FSE ARF H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYAH 132
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCV 510
+ V +RDLK EN L LD P+ R F
Sbjct: 133 AMQVAHRDLKLENTL-----------------------------LDGSPAPRLKIADFGY 163
Query: 511 QPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFV 570
A + S +P+S +G P+
Sbjct: 164 SKASVLHS-----------------------QPKSAVGTPA------------------- 181
Query: 571 GTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKG----SGNRATLFNVVGQQ 625
Y+APE+ +K E G D W+ G+ L+ +L G PF+ R T+ ++ Q
Sbjct: 182 ----YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 237
Query: 626 LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
PD S R LI + V +P R+ + EI+ H +F
Sbjct: 238 YAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
F D TS ++D IR LLVK+P+ R+ ++ QHP+ +
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ +++++K LG G G V L+ ++T A+K+++K LA R + E L+LL
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP + LY ++ +V+EY + QR SE AR
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYC 128
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTS 493
H +V+RDLKPEN+L+ + ++ ++DF LS +KTS
Sbjct: 129 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTS 171
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 571 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
G+ Y APE+I G+ + G VD W+ G+ L+ +L + PF N+ P
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 630 D--SPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
SP + LI+ +L+ P +R+ + EI Q +F+
Sbjct: 233 KFLSPGAA----GLIKRMLIVNPLNRISIH----EIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ +++++K LG G G V L+ ++T A+K+++K LA R + E L+LL
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP + LY ++ +V+EY + QR SE AR
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYC 129
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTS 493
H +V+RDLKPEN+L+ + ++ ++DF LS +KTS
Sbjct: 130 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTS 172
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 571 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
G+ Y APE+I G+ + G VD W+ G+ L+ +L + PF N+ P
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+ A LI+ +L+ P +R+ + EI Q +F+
Sbjct: 234 KFLSPGAAG--LIKRMLIVNPLNRISIH----EIMQDDWFK 268
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQL 387
+ ++RLLK +G G+ V L+ T A+K++DK L +S +KL R E I ++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIXKV 69
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L+ ET++ LV EY GG++ E A+F
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYC 129
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 130 --HQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 568 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+F G Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G + V+ +
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHR 653
R P +T +L++ L+ P R
Sbjct: 231 RIPFYXSTD--CENLLKKFLILNPSKR 255
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F +++ LG G G+VYL+ + A+KV+ K+ L + + E EI L HP
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ +Y +F + L++E+ P G+L+ ++ Q F E + H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSL 481
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
+ R GT +YL PE+I+G+ H VD W G+ +E L G PF + T +V
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
L+FP P S S+DLI LL P RL +K G E HP+ +
Sbjct: 226 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK-GVME---HPWVKA 268
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ +++++K LG G G V L+ ++T A+K+++K LA R + E L+LL
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP + LY ++ +V+EY + QR SE AR
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYC 123
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTS 493
H +V+RDLKPEN+L+ + ++ ++DF LS +KTS
Sbjct: 124 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTS 166
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 571 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
G+ Y APE+I G+ + G VD W+ G+ L+ +L + PF N+ P
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+ A LI+ +L+ P +R+ + EI Q +F+
Sbjct: 228 KFLSPGAAG--LIKRMLIVNPLNRISIH----EIMQDDWFK 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ +++++K LG G G V L+ ++T A+K+++K LA R + E L+LL
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP + LY ++ +V+EY + QR SE AR
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYC 119
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +V+RDLKPEN+L+ + ++ ++DF LS
Sbjct: 120 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 571 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
G+ Y APE+I G+ + G VD W+ G+ L+ +L + PF N+ P
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+ A LI+ +L+ P +R+ + EI Q +F+
Sbjct: 224 KFLSPGAAG--LIKRMLIVNPLNRISIH----EIMQDDWFK 258
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G+VYL+ ++ A+KV+ K L + + E EI L HP + LY
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
+F L++EY P G ++ R+ Q F E H V++RD
Sbjct: 80 YFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYCHSKRVIHRD 137
Query: 459 LKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDP 499
+KPEN+L+ +G + ++DF S+ S +LD P
Sbjct: 138 IKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLP 178
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++R + GT +YL PE+I+G H VD W+ G+ +E L G PF+ + T +
Sbjct: 164 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
+ FPD + +RDLI LL RL + E+ +HP+ +
Sbjct: 224 RVEFTFPD--FVTEGARDLISRLLKHNASQRLTL----AEVLEHPWIKA 266
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
F D TS ++D IR LLVK+P+ R+ ++ QHP+ +
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R + GT +YL PE+I+G H VD W G+ +ELL G PF+ + + T +V
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
L+FP S T ++DLI LL P RL + ++ HP+
Sbjct: 237 DLKFPASVPT--GAQDLISKLLRHNPSERLPL----AQVSAHPW 274
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F + + LG G G+VYL+ + A+KV+ K+ + + + E EI L HP
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ LY +F R L++EY P G+L+ ++ Q F E H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSL 481
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSV 171
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + +E A H L
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L+ E GG+L + +E A H L
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
F D TS ++D IR LLVK+P+ R+ ++ QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L + + +E A H L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 134/347 (38%), Gaps = 86/347 (24%)
Query: 325 DGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
DG + + H+ L LG G G V + E T A+K++++ + S + + + E +
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
L+L HP + LY T +VMEY GG+L + G+ E AR
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GR-VEEMEARRLFQQILS 122
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGP 504
H VV+RDLKPENVL+ + ++DF L S++ SD
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL-------------SNMMSD------ 163
Query: 505 GGSFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAA 564
G F R+ G P+ PE+++
Sbjct: 164 -GEFL----------------------------------RTSCGSPNYAAPEVISGRL-- 186
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV-G 623
Y PE+ D W+ G+ L+ LL G PF + TLF + G
Sbjct: 187 ----------YAGPEV----------DIWSCGVILYALLCGTLPFDDE-HVPTLFKKIRG 225
Query: 624 QQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
P+ S A+ L+ +L +P R +K +I++H +F+
Sbjct: 226 GVFYIPEYLNRSVAT--LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G+VYL+ + A+KV+ K+ L + + E EI L HP + +Y
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
+F + L++E+ P G+L+ ++ Q F E + H V++RD
Sbjct: 83 YFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 140
Query: 459 LKPENVLVRDDGHIMLSDFDLSL 481
+KPEN+L+ G + ++DF S+
Sbjct: 141 IKPENLLMGYKGELKIADFGWSV 163
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
+ R GT +YL PE+I+G+ H VD W G+ +E L G PF + T +V
Sbjct: 167 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
L+FP P S S+DLI LL P RL +K G E HP+ +
Sbjct: 227 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK-GVME---HPWVKA 269
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 123/342 (35%), Gaps = 110/342 (32%)
Query: 359 FAMKVMDKASLASRKKLTR-------AQTEREILQLLDHPFLPTLYTHFETDRFSCLVME 411
+A+K+++K + SR ++ R Q + IL+L++ FE D LV E
Sbjct: 41 YAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF---------FEDDTRFYLVFE 91
Query: 412 YCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGH 471
GG + Q+Q KHF+E A H G+ +RDLKPEN+
Sbjct: 92 KLQGGSILAHIQKQ--KHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENI------- 142
Query: 472 IMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQPACIEPSSVCIQPACFIPRI 531
C P + P +C
Sbjct: 143 ------------------------------------LCESPEKVSPVKICD--------- 157
Query: 532 FPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEII-----KGEGH 586
F + K + + P T P G+ EY+APE++ + +
Sbjct: 158 FDLGSGMKLNNSCTPITTPELTTP--------------CGSAEYMAPEVVEVFTDQATFY 203
Query: 587 GSAVDWWTFGIFLHELLYGKTPFKG------SGNRATLFNVVGQQL---------RFPDS 631
D W+ G+ L+ +L G PF G +R + V +L FPD
Sbjct: 204 DKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDK 263
Query: 632 PATSYAS--RDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
+S +DLI LLV++ + RL A ++ QHP+ +G
Sbjct: 264 DWAHISSEAKDLISKLLVRDAKQRL----SAAQVLQHPWVQG 301
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G+VYL+ + A+KV+ K+ L + + E EI L HP + +Y
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
+F + L++E+ P G+L+ ++ Q F E + H V++RD
Sbjct: 82 YFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 139
Query: 459 LKPENVLVRDDGHIMLSDFDLSL 481
+KPEN+L+ G + ++DF S+
Sbjct: 140 IKPENLLMGYKGELKIADFGWSV 162
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 563 AARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
+ R GT +YL PE+I+G+ H VD W G+ +E L G PF + T +V
Sbjct: 166 SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
L+FP P S S+DLI LL P RL +K G E HP+ +
Sbjct: 226 NVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPLK-GVME---HPWVKA 268
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 126/347 (36%), Gaps = 100/347 (28%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL--QLLDH 390
+ L+K +G G+ G L + A+K ++ R + A +REI+ + L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIAANVKREIINHRSLRH 74
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + T +VMEY GG+L R G+ FSE ARF H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 451 MLGVVYRDLKPENVLVRDDG----HIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGG 506
+ V +RDLK EN L+ DG + + DF S K+S L S
Sbjct: 133 AMQVCHRDLKLENTLL--DGSPAPRLKICDFGYS----------KSSVLHS--------- 171
Query: 507 SFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARS 566
+P+S +G P+ PE+
Sbjct: 172 -----------------------------------QPKSTVGTPAYIAPEV--------- 187
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKG----SGNRATLFNVV 622
++K E G D W+ G+ L+ +L G PF+ R T+ ++
Sbjct: 188 -------------LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
Q PD S R LI + V +P R+ + EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT ++APEI+ E G D W+ G+ + LL G +PF G + TL NV
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
F D TS ++D IR LLVK+P+ R+ ++ QHP+ +
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKKLTRAQTERE--ILQLLDHPFLPT 395
LG G V ST +A K + K + +SR+ ++R ERE IL+ + HP + T
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 396 LYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVV 455
L+ +E L++E GG+L + +E A H L +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIA 136
Query: 456 YRDLKPENVLVRDDG----HIMLSDFDLS 480
+ DLKPEN+++ D I + DF L+
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 325 DGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
DG + + H+ L LG G G V + E T A+K++++ + S + + + E +
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN 64
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
L+L HP + LY T +VMEY GG+L + G+ E AR
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GR-VEEMEARRLFQQILS 122
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H VV+RDLKPENVL+ + ++DF LS
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 571 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV-GQQLRF 628
G+ Y APE+I G + G VD W+ G+ L+ LL G PF + TLF + G
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-HVPTLFKKIRGGVFYI 230
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
P+ S A+ L+ +L +P R +K +I++H +F+
Sbjct: 231 PEYLNRSVAT--LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN--WALIR 678
F + TS ++D IR LLVKE + RL ++ E +HP+ V+ A++R
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDTQQAMVR 287
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDK-ASLASRKKLTRAQTERE--ILQLLDHPFLPT 395
LG G V ST +A K + K S ASR+ + R + ERE IL+ + HP + T
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 396 LYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVV 455
L+ +E L++E GG+L ++ SE A H +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 456 YRDLKPENVLVRDDG----HIMLSDFDLS 480
+ DLKPEN+++ D HI L DF L+
Sbjct: 138 HFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 122/343 (35%), Gaps = 92/343 (26%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL--QLLDH 390
+ L+K +G G+ G L + A+K ++ R + +REI+ + L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + T +VMEY GG+L R G+ FSE ARF H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCV 510
+ V +RDLK EN L LD P+ R +F
Sbjct: 133 AMQVCHRDLKLENTL-----------------------------LDGSPAPRLKICAFGY 163
Query: 511 QPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFV 570
+ + S +P+S +G P+ PE+
Sbjct: 164 SKSSVLHS-----------------------QPKSTVGTPAYIAPEV------------- 187
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKG----SGNRATLFNVVGQQL 626
++K E G D W+ G+ L+ +L G PF+ R T+ ++ Q
Sbjct: 188 ---------LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 238
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
PD S R LI + V +P R+ + EI+ H +F
Sbjct: 239 AIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 121/343 (35%), Gaps = 92/343 (26%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL--QLLDH 390
+ L+K +G G+ G L + A+K ++ R + +REI+ + L H
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 73
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + T +VMEY GG+L R G+ FSE ARF H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 131
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCV 510
+ V +RDLK EN L LD P+ R F
Sbjct: 132 AMQVCHRDLKLENTL-----------------------------LDGSPAPRLKICDFGY 162
Query: 511 QPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFV 570
+ + S +P+S +G P+ PE+
Sbjct: 163 SKSSVLHS-----------------------QPKSTVGTPAYIAPEV------------- 186
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKG----SGNRATLFNVVGQQL 626
++K E G D W+ G+ L+ +L G PF+ R T+ ++ Q
Sbjct: 187 ---------LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 237
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
PD S R LI + V +P R+ + EI+ H +F
Sbjct: 238 AIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN--WALIR 678
F + TS ++D IR LLVKE + RL ++ E +HP+ V+ A++R
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDK-ASLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K S ASR+ ++R + ERE IL+ + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L ++ SE A H
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 313 PRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR 372
PRWK IR + FR + LG G V L+E T+ A+K + K +L +
Sbjct: 8 PRWKQAEDIR------DIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK 59
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSE 432
+ + E +L + HP + L +E+ L+M+ GG+L R + G +
Sbjct: 60 E--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTER 116
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVL---VRDDGHIMLSDFDLS 480
A+R H LG+V+RDLKPEN+L + +D IM+SDF LS
Sbjct: 117 DASRLIFQVLDAVKYL-HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPD 630
GT Y+APE++ + + AVD W+ G+ + LL G PF N A LF + + D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFD 238
Query: 631 SPA---TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
SP S +++D IR L+ K+P+ R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN--WALIR 678
F + TS ++D IR LLVKE + RL ++ E +HP+ V+ A++R
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDK-ASLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K S ASR+ ++R + ERE IL+ + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L ++ SE A H
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 313 PRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR 372
PRWK IR + FR + LG G V L+E T+ A+K + K +L +
Sbjct: 8 PRWKQAEDIR------DIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK 59
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSE 432
+ + E +L + HP + L +E+ L+M+ GG+L R + G +
Sbjct: 60 E--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTER 116
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVL---VRDDGHIMLSDFDLS 480
A+R H LG+V+RDLKPEN+L + +D IM+SDF LS
Sbjct: 117 DASRLIFQVLDAVKYL-HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPD 630
GT Y+APE++ + + AVD W+ G+ + LL G PF N A LF + + D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFD 238
Query: 631 SPA---TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
SP S +++D IR L+ K+P+ R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 313 PRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR 372
PRWK IR + FR LG G V L+E T+ A+K + K +L +
Sbjct: 8 PRWKQAEDIR------DIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK 59
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSE 432
+ + E +L + HP + L +E+ L+M+ GG+L R + G +
Sbjct: 60 E--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTER 116
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVL---VRDDGHIMLSDFDLS 480
A+R H LG+V+RDLKPEN+L + +D IM+SDF LS
Sbjct: 117 DASRLIFQVLDAVKYL-HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPD 630
GT Y+APE++ + + AVD W+ G+ + LL G PF N A LF + + D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFD 238
Query: 631 SPA---TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
SP S +++D IR L+ K+P+ R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 313 PRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR 372
PRWK IR + FR + LG G V L+E T+ A+K + K +L +
Sbjct: 8 PRWKQAEDIR------DIYDFRDV--LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK 59
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSE 432
+ + E +L + HP + L +E+ L+M+ GG+L R + G +
Sbjct: 60 E--GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD-RIVEKGFYTER 116
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVL---VRDDGHIMLSDFDLS 480
A+R H LG+V+RDLKPEN+L + +D IM+SDF LS
Sbjct: 117 DASRLIFQVLDAVKYL-HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPD 630
GT Y+APE++ + + AVD W+ G+ + LL G PF N A LF + + D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE-NDAKLFEQILKAEYEFD 238
Query: 631 SPA---TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
SP S +++D IR L+ K+P+ R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN--WALIR 678
F + TS ++D IR LLVKE + RL ++ E +HP+ V+ A++R
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDK-ASLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K S ASR+ ++R + ERE IL+ + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L ++ SE A H
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 121/343 (35%), Gaps = 92/343 (26%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL--QLLDH 390
+ L+K +G G+ G L + A+K ++ R + +REI+ + L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + T +VMEY GG+L R G+ FSE ARF H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCV 510
+ V +RDLK EN L LD P+ R +F
Sbjct: 133 AMQVCHRDLKLENTL-----------------------------LDGSPAPRLKICAFGY 163
Query: 511 QPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFV 570
+ + S +P+ +G P+ PE+
Sbjct: 164 SKSSVLHS-----------------------QPKDTVGTPAYIAPEV------------- 187
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKG----SGNRATLFNVVGQQL 626
++K E G D W+ G+ L+ +L G PF+ R T+ ++ Q
Sbjct: 188 ---------LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY 238
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
PD S R LI + V +P R+ + EI+ H +F
Sbjct: 239 AIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F ++LG G G V+L E S+ +K ++K S+ + + + E E+L+ LDHP
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPN 81
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ ++ FE +VME C GG+L + + GK SE H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 451 MLGVVYRDLKPENVLVRDDG-H--IMLSDFDLS 480
VV++DLKPEN+L +D H I + DF L+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 543 PRSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHEL 602
P S + + L EL + S + GT Y+APE+ K + D W+ G+ ++ L
Sbjct: 162 PHSPIKIIDFGLAELF--KSDEHSTNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFL 218
Query: 603 LYGKTPFKGSGNRATLFNVVGQQLRFPD-------SPATSYASRDLIRGLLVKEPQHRLG 655
L G PF G T V Q+ + + P T A DL++ +L K+P+ R
Sbjct: 219 LTGCLPFTG-----TSLEEVQQKATYKEPNYAVECRPLTPQAV-DLLKQMLTKDPERR-- 270
Query: 656 VKRGATEIKQHPFFE 670
A ++ H +F+
Sbjct: 271 --PSAAQVLHHEWFK 283
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN--WALIR 678
F + TS ++D IR LLVKE + RL ++ E +HP+ V+ A++R
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDK-ASLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K S ASR+ ++R + ERE IL+ + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L ++ SE A H
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN--WALIR 678
F + TS ++D IR LLVKE + RL ++ E +HP+ V+ A++R
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDK-ASLASRKKLTRAQTERE--ILQLLDHPFL 393
+ LG G V ST +A K + K S ASR+ ++R + ERE IL+ + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
TL+ +E L++E GG+L ++ SE A H
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKK 135
Query: 454 VVYRDLKPENVLVRDDG----HIMLSDFDLS 480
+ + DLKPEN+++ D HI L DF L+
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 322 RARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTE 381
+ DG + + H+ L LG G G V + + T A+K++++ + S + + + E
Sbjct: 7 QKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRRE 66
Query: 382 REILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXX 441
+ L+L HP + LY T +VMEY GG+L + E F
Sbjct: 67 IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL 126
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
HM VV+RDLKPENVL+ + ++DF LS
Sbjct: 127 SGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLS 163
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 571 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
G+ Y APE+I G + G VD W+ G+ L+ LL G PF + TLF + + +
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKICDGIFYT 235
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
P S S L++ +L +P R +K +I++H +F+
Sbjct: 236 PQYLNPSVIS--LLKHMLQVDPMKRATIK----DIREHEWFK 271
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 319 LAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA------SR 372
+ +R ++G +G S+F++ ++LG G G V L + + A+KV+ K+
Sbjct: 25 MYVRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 373 KKLTRAQ----TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK 428
K + + E +L+ LDHP + L+ FE ++ LV E+ GG+L Q
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRH 141
Query: 429 HFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDG---HIMLSDFDLS 480
F E A H +V+RD+KPEN+L+ + +I + DF LS
Sbjct: 142 KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ--LR 627
+GT Y+APE++K + + D W+ G+ ++ LL G PF G ++ + V +
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHR 653
F D S +++LI+ +L + R
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 127/341 (37%), Gaps = 86/341 (25%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++ LG G G V + T+ +A+KV++KAS A K + E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEY-AARFXXXXXXXXXXXXHM 451
+ L+ E +V E GG+L + K FSE+ AAR
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFS-------- 132
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQ 511
G+ Y + N++ RD L+++ D D G S C
Sbjct: 133 -GITY--MHKHNIVHRD--------------LKPENILLESKEKDCDIKIIDFGLSTC-- 173
Query: 512 PACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVG 571
F Q K K R +G
Sbjct: 174 --------------------FQQNTKMKDR----------------------------IG 185
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF--P 629
T Y+APE+++G + D W+ G+ L+ LL G PF G L V + F P
Sbjct: 186 TAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
S ++DLIR +L P R+ AT+ +HP+ +
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 236
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGV 656
F + TS ++D IR LLVK+P+ R+ +
Sbjct: 237 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXI 267
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLAS-RKKLTRAQTERE--ILQLL 388
H+ + + LG G V T +A K + K L+S R+ ++R + ERE IL+ +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + TL+ FE L++E GG+L + +E A
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 130
Query: 449 XHMLGVVYRDLKPENVLVRDDG----HIMLSDFDLS 480
H + + DLKPEN+++ D I L DF ++
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 229
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGV 656
F + TS ++D IR LLVK+P+ R+ +
Sbjct: 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTI 260
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLAS-RKKLTRAQTERE--ILQLL 388
H+ + + LG G V T +A K + K L+S R+ ++R + ERE IL+ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + TL+ FE L++E GG+L + +E A
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 123
Query: 449 XHMLGVVYRDLKPENVLVRDDG----HIMLSDFDLS 480
H + + DLKPEN+++ D I L DF ++
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
+ GT E++APEI+ E G D W+ G+ + LL G +PF G + TL N+
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 250
Query: 628 FPDS--PATSYASRDLIRGLLVKEPQHRLGV 656
F + TS ++D IR LLVK+P+ R+ +
Sbjct: 251 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXI 281
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL-ASRKKLTRAQTERE--ILQLL 388
H+ + + LG G V T +A K + K L +SR+ ++R + ERE IL+ +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP + TL+ FE L++E GG+L + +E A
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 144
Query: 449 XHMLGVVYRDLKPENVLVRDDG----HIMLSDFDLS 480
H + + DLKPEN+++ D I L DF ++
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G V L + T A+KV+ K + + E ++L+ LDHP + LY
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + LV E GG+L + K FSE A H +V+RD
Sbjct: 118 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 175
Query: 459 LKPENVLVR---DDGHIMLSDFDLSLRCAVSPTL 489
LKPEN+L+ D +I + DF LS S +
Sbjct: 176 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ L V + F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVK 657
P S +++DLIR +L P R+ +
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 301
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G V L + T A+KV+ K + + E ++L+ LDHP + LY
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + LV E GG+L + K FSE A H +V+RD
Sbjct: 117 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 174
Query: 459 LKPENVLVR---DDGHIMLSDFDLSLRCAVSPTL 489
LKPEN+L+ D +I + DF LS S +
Sbjct: 175 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ L V + F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVK 657
P S +++DLIR +L P R+ +
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 300
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++ LG G G VY ++ T A KV++ S ++L E EIL DHP+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPY 69
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ L + D +++E+CPGG + + + + +E + H
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFC 509
+++RDLK NVL+ +G I L+DF +S + TL K S P P C
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL--KTLQKRDSFIGTPYWMAPEVVMC 183
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
T + SF+GT ++APE++ E + D W+ GI L E+ + P
Sbjct: 162 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 221
Query: 617 TLFNVVGQQ---LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN 673
L + L P + + RD ++ L K P+ R A ++ +HPF +
Sbjct: 222 VLLKIAKSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 275
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G V L + T A+KV+ K + + E ++L+ LDHP + LY
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + LV E GG+L + K FSE A H +V+RD
Sbjct: 94 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRD 151
Query: 459 LKPENVLVR---DDGHIMLSDFDLS 480
LKPEN+L+ D +I + DF LS
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLS 176
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ L V + F
Sbjct: 189 IGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVK 657
P S +++DLIR L P R+ +
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISAR 277
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G V+ E ++T A K++ + ++++ + E ++ LDH L LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV---KNEISVMNQLDHANLIQLYD 153
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE+ LVMEY GG+L R + +E H + +++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 459 LKPENVLV--RDDGHIMLSDFDLSLR 482
LKPEN+L RD I + DF L+ R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARR 238
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPD 630
GT E+LAPE++ + D W+ G+ + LL G +PF G + TL N++ + D
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 631 S--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
S +++ I LL+KE R+ A+E +HP+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRI----SASEALKHPWL 346
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
++ L +G G G V ++ TR A K + K + + + R + E EI++ LDH
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDH 65
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXXX 449
P + LY FE + LVME C GG+L +R K F E A
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDAARIMKDVLSAVAYC 122
Query: 450 HMLGVVYRDLKPENVLVRD---DGHIMLSDFDLSLR 482
H L V +RDLKPEN L D + L DF L+ R
Sbjct: 123 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
VGT Y++P++++G +G D W+ G+ ++ LL G PF + + + FP
Sbjct: 169 VGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 630 --DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
D S + LIR LL K P+ R+ + + +H +FE
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRI----TSLQALEHEWFE 266
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F + LG G V L+E +T FA+K + K +L + K + + E +L+ + H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHEN 81
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ L +E+ LVM+ GG+L R + G ++E A H +
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFD-RIVEKG-FYTEKDASTLIRQVLDAVYYLHRM 139
Query: 453 GVVYRDLKPENVLVR---DDGHIMLSDFDLS 480
G+V+RDLKPEN+L ++ IM+SDF LS
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPD 630
GT Y+APE++ + + AVD W+ G+ + LL G PF + ++ + F D
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF-D 242
Query: 631 SPA---TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEG 671
SP S +++D IR L+ K+P R ++ A +HP+ G
Sbjct: 243 SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G Y T+ FA KV+ K+ L + + TE I + LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE D F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 459 LKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQPACIEPS 518
LK N+ + DD + + DF L+ + ++ D R+ + C P I P
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA------------TKIEFDGERK---KTLCGTPNYIAPE 212
Query: 519 SVC 521
+C
Sbjct: 213 VLC 215
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R + GT Y+APE++ +GH VD W+ G L+ LL GK PF+ S + T +
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 625 QLRFPD--SPATSYASRDLIRGLLVKEPQHRLGVKRGATE 662
+ P +P S LIR +L +P R V T+
Sbjct: 258 EYSVPRHINPVAS----ALIRRMLHADPTLRPSVAELLTD 293
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++ LG G G VY ++ T A KV++ S ++L E EIL DHP+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPY 77
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ L + D +++E+CPGG + + + + +E + H
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFC 509
+++RDLK NVL+ +G I L+DF +S + TL K S P P C
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL--KTLQKRDSFIGTPYWMAPEVVMC 191
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
T + SF+GT ++APE++ E + D W+ GI L E+ + P
Sbjct: 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 229
Query: 617 TLFNVVGQQ---LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN 673
L + L P + + RD ++ L K P+ R A ++ +HPF +
Sbjct: 230 VLLKIAKSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 283
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 129/343 (37%), Gaps = 90/343 (26%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++ LG G G V + T+ +A+KV++KAS A K + E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEY-AARFXXXXXXXXXXXXHM 451
+ L+ E +V E GG+L + K FSE+ AAR
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFS-------- 132
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSP--TLIKTSSLDSDPSRRGPGGSFC 509
G+ Y + N++ RD + P L+++ D D G S C
Sbjct: 133 -GITY--MHKHNIVHRD----------------LKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 510 VQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSF 569
F Q K K R
Sbjct: 174 ----------------------FQQNTKMKDR---------------------------- 183
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE+++G + D W+ G+ L+ LL G PF G L V + F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
P S ++DLIR +L P R+ AT+ +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G V L + T A+KV+ K + + E ++L+ LDHP + LY
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + LV E GG+L + K FSE A H +V+RD
Sbjct: 94 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 151
Query: 459 LKPENVLVR---DDGHIMLSDFDLSLRCAVSPTL 489
LKPEN+L+ D +I + DF LS S +
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ L V + F
Sbjct: 189 IGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVK 657
P S +++DLIR +L P R+ +
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 277
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
++ L +G G G V ++ TR A K + K + + + R + E EI++ LDH
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDH 82
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXXX 449
P + LY FE + LVME C GG+L +R K F E A
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDAARIMKDVLSAVAYC 139
Query: 450 HMLGVVYRDLKPENVLVRD---DGHIMLSDFDLSLR 482
H L V +RDLKPEN L D + L DF L+ R
Sbjct: 140 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
VGT Y++P++++G +G D W+ G+ ++ LL G PF + + + FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 630 --DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
D S + LIR LL K P+ R+ + + +H +FE
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRI----TSLQALEHEWFE 283
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 546 ELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYG 605
+ GL + P+ + + T A T E+ APEI+ E G D W G+ + LL G
Sbjct: 194 DFGLATKLNPDEIVKVTTA-------TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
Query: 606 KTPFKGSGNRATLFNVVGQQLRFPDSPATSYA--SRDLIRGLLVKEPQHRLGVKRGATEI 663
+PF G + TL NV F + +S + ++D I+ LL KEP+ RL V
Sbjct: 247 LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL--- 303
Query: 664 KQHPFFEG 671
+HP+ +G
Sbjct: 304 -EHPWLKG 310
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 8/161 (4%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
++ +L+ LG G G V+ +T F K ++ + + + E I+ L HP
Sbjct: 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISIMNQLHHP 108
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
L L+ FE L++E+ GG+L R + + A HM
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELF---DRIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 452 L--GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLI 490
+V+ D+KPEN++ + D L ++P I
Sbjct: 166 HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 129/343 (37%), Gaps = 90/343 (26%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++ LG G G V + T+ +A+KV++KAS A K + E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEY-AARFXXXXXXXXXXXXHM 451
+ L+ E +V E GG+L + K FSE+ AAR
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFS-------- 132
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSP--TLIKTSSLDSDPSRRGPGGSFC 509
G+ Y + N++ RD + P L+++ D D G S C
Sbjct: 133 -GITY--MHKHNIVHRD----------------LKPENILLESKEKDCDIKIIDFGLSTC 173
Query: 510 VQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSF 569
F Q K K R
Sbjct: 174 ----------------------FQQNTKMKDR---------------------------- 183
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE+++G + D W+ G+ L+ LL G PF G L V + F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
P S ++DLIR +L P R+ AT+ +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G V L + T A+KV+ K + + E ++L+ LDHP + LY
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + LV E GG+L + K FSE A H +V+RD
Sbjct: 100 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 157
Query: 459 LKPENVLVR---DDGHIMLSDFDLSLRCAVSPTL 489
LKPEN+L+ D +I + DF LS S +
Sbjct: 158 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 191
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF- 628
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ L V + F
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 629 -PDSPATSYASRDLIRGLLVKEPQHRLGVK 657
P S +++DLIR +L P R+ +
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 283
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G Y T+ FA KV+ K+ L + + TE I + LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE D F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 459 LKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQPACIEPS 518
LK N+ + DD + + DF L+ + ++ D R+ C P I P
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA------------TKIEFDGERK---KXLCGTPNYIAPE 212
Query: 519 SVC 521
+C
Sbjct: 213 VLC 215
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R GT Y+APE++ +GH VD W+ G L+ LL GK PF+ S + T +
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 625 QLRFPD--SPATSYASRDLIRGLLVKEPQHRLGVKRGATE 662
+ P +P S LIR +L +P R V T+
Sbjct: 258 EYSVPRHINPVAS----ALIRRMLHADPTLRPSVAELLTD 293
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G Y T+ FA KV+ K+ L + + TE I + LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE D F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 459 LKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQPACIEPS 518
LK N+ + DD + + DF L+ + ++ D R+ C P I P
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLA------------TKIEFDGERK---KDLCGTPNYIAPE 212
Query: 519 SVC 521
+C
Sbjct: 213 VLC 215
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R GT Y+APE++ +GH VD W+ G L+ LL GK PF+ S + T +
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 625 QLRFPD--SPATSYASRDLIRGLLVKEPQHRLGVKRGATE 662
+ P +P S LIR +L +P R V T+
Sbjct: 258 EYSVPRHINPVAS----ALIRRMLHADPTLRPSVAELLTD 293
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G Y T+ FA KV+ K+ L + + TE I + LD+P + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE D F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 459 LKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQPACIEPS 518
LK N+ + DD + + DF L+ + ++ D R+ C P I P
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLA------------TKIEFDGERK---KDLCGTPNYIAPE 196
Query: 519 SVC 521
+C
Sbjct: 197 VLC 199
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R GT Y+APE++ +GH VD W+ G L+ LL GK PF+ S + T +
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 625 QLRFPD--SPATSYASRDLIRGLLVKEPQHRLGVKRGATE 662
+ P +P S LIR +L +P R V T+
Sbjct: 242 EYSVPRHINPVAS----ALIRRMLHADPTLRPSVAELLTD 277
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++ LG G G VY ++ T A KV+D S ++L E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 393 LPTLYTHFETDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ L F + +++E+C GG D L +P +E + H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFC 509
+++RDLK N+L DG I L+DF +S + + T+ + S P P C
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN--TRTIQRRDSFIGTPYWMAPEVVMC 209
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 562 TAARSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
T R SF+GT ++APE++ K + D W+ GI L E+ + P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 617 TLFNVVGQQ---LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
L + + L P ++++ +D ++ L K R +++ QHPF
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSNF--KDFLKKCLEKNVDARW----TTSQLLQHPF 296
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+GT EYLAPEI+ + +A D W GI + LL +PF G N+ T N+ + +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 629 PDSPATSYA--SRDLIRGLLVKEPQHR 653
+ +S + + D I+ LLVK P+ R
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 329 GMSHFRLL--KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI-- 384
++F +L K LG G V ST +A K + K R + RA+ EI
Sbjct: 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR---RGQDCRAEILHEIAV 81
Query: 385 LQLLDH-PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
L+L P + L+ +E L++EY GG++ +L + + SE
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL 141
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDD---GHIMLSDFDLS 480
H +V+ DLKP+N+L+ G I + DF +S
Sbjct: 142 EGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL-- 387
M + L+++G G G L + + + +K ++ + ++S++ R ++ RE+ L
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE---REESRREVAVLAN 79
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
+ HP + FE + +VM+YC GGDL Q G F E
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RD+K +N+ + DG + L DF ++
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT 617
V T + + +GT YL+PEI + + + + D W G L+EL K F+ +
Sbjct: 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL 233
Query: 618 LFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
+ ++ P S SY R L+ L + P+ R
Sbjct: 234 VLKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G V L+ T+ A+K + + L R + E L+LL HP + LY
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
T +V+EY GG+L + K +E R H +V+RD
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 459 LKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTS 493
LKPEN+L+ D+ ++ ++DF LS +KTS
Sbjct: 134 LKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTS 167
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 571 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
G+ Y APE+I G+ + G VD W+ GI L+ +L G+ PF V P
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP 228
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPM 689
D S ++ LIR ++V +P R+ ++ EI++ P+F VN P+ RPM
Sbjct: 229 D--FLSPGAQSLIRRMIVADPMQRITIQ----EIRRDPWF-NVNL--------PDYLRPM 273
Query: 690 EAELPGKFG 698
E E+ G +
Sbjct: 274 E-EVQGSYA 281
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 28/176 (15%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLAS------------------ 371
++ + L +G G G V L+ + Y+AMKV+ K L
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 372 -----RKKLTRAQTEREILQLLDHPFLPTLYTHFE--TDRFSCLVMEYCPGGDLHTLRQR 424
R + + E IL+ LDHP + L + + +V E G + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 425 QPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+P SE ARF H +++RD+KP N+LV +DGHI ++DF +S
Sbjct: 132 KP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 570 VGTHEYLAPEII---KGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
VGT ++APE + + G A+D W G+ L+ ++G+ PF + Q L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
FPD P + +DLI +L K P+ R+ V EIK HP+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIVV----PEIKLHPW 295
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++ LG G G VY ++ T A KV+D S ++L E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 393 LPTLYTHFETDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ L F + +++E+C GG D L +P +E + H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLR 482
+++RDLK N+L DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 14/112 (12%)
Query: 565 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLF 619
R SF+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 620 NVVGQQ---LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ + L P ++++ +D ++ L K R +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNF--KDFLKKCLEKNVDARW----TTSQLLQHPF 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ ++ LG G G VY ++ T A KV+D S ++L E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 393 LPTLYTHFETDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ L F + +++E+C GG D L +P +E + H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLR 482
+++RDLK N+L DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 14/112 (12%)
Query: 565 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLF 619
R F+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 620 NVVGQQ---LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ + L P ++++ +D ++ L K + + +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNF--KDFLKKCLEK----NVDARWTTSQLLQHPF 296
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 125/347 (36%), Gaps = 100/347 (28%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREIL--QLLDH 390
+ +K +G G+ G L T+ A+K +++ + +REI+ + L H
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN------VQREIINHRSLRH 75
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + T ++MEY GG+L+ R G+ FSE ARF H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYE-RICNAGR-FSEDEARFFFQQLLSGVSYCH 133
Query: 451 MLGVVYRDLKPENVLVRDDG----HIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGG 506
+ + +RDLK EN L+ DG + + DF S K+S L S
Sbjct: 134 SMQICHRDLKLENTLL--DGSPAPRLKICDFGYS----------KSSVLHS--------- 172
Query: 507 SFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARS 566
+P+S +G P+ PE+
Sbjct: 173 -----------------------------------QPKSTVGTPAYIAPEV--------- 188
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKG----SGNRATLFNVV 622
+++ E G D W+ G+ L+ +L G PF+ R T+ ++
Sbjct: 189 -------------LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 623 GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ PD S LI + V +P R+ + EIK H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIP----EIKTHSWF 278
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 359 FAMKVMDKASLASRKKLTRAQTEREI--LQLLD-HPFLPTLYTHFETDRFSCLVMEYCPG 415
FA+K++ K A T++EI L+L + HP + L+ F + LVME G
Sbjct: 39 FAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 416 GDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDG---HI 472
G+L + + KHFSE A + H +GVV+RDLKPEN+L D+ I
Sbjct: 91 GEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEI 148
Query: 473 MLSDF 477
+ DF
Sbjct: 149 KIIDF 153
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDS 631
T Y APE++ G+ + D W+ G+ L+ +L G+ PF+ T + V +
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 632 ---------PATSYASRDLIRGLLVKEPQHRL 654
S ++DLI+GLL +P RL
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 571 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
GT YLAPEI+K G+G VD W G+ L LL G PF L ++
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 625 QLRF--PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
Q +F P+ S +DLI LL +P+ RL A + QHPFFE
Sbjct: 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARL----TAEQALQHPFFE 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 359 FAMKVMD-KASLASRKKL--TRAQTERE---ILQLLDHPFLPTLYTHFETDRFSCLVMEY 412
FA+K+M+ A S ++L R T RE + Q+ HP + TL +E+ F LV +
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDL 181
Query: 413 CPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHI 472
G+L + SE R H +V+RDLKPEN+L+ D+ I
Sbjct: 182 MRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQI 239
Query: 473 MLSDFDLSLRCAVSP 487
LSDF S C + P
Sbjct: 240 RLSDFGFS--CHLEP 252
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHE 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F + LG G VY + T+ +A+KV+ K KK+ R TE +L L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVR--TEIGVLLRLSHPN 109
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ L FET LV+E GG+L R + G ++SE A H
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFD-RIVEKG-YYSERDAADAVKQILEAVAYLHEN 167
Query: 453 GVVYRDLKPENVLVRD---DGHIMLSDFDLSLRCAVSPTLIKT 492
G+V+RDLKPEN+L D + ++DF LS + L+KT
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLS-KIVEHQVLMKT 209
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 533 PQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDW 592
P+ T P + L + L ++V +++ GT Y APEI++G +G VD
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC--GTPGYCAPEILRGCAYGPEVDM 233
Query: 593 WTFGIFLHELLYGKTPFKGS-GNRATLFNVVGQQLRF--PDSPATSYASRDLIRGLLVKE 649
W+ GI + LL G PF G++ ++ + F P S ++DL+R L+V +
Sbjct: 234 WSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD 293
Query: 650 PQHRLGVKRGATEIKQHPFFEG 671
P+ RL + QHP+ G
Sbjct: 294 PKKRLTTFQAL----QHPWVTG 311
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Query: 342 GDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFE 401
GD G VY ++ T A KV+D S ++L E +IL DHP + L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 402 TDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDL 459
+ +++E+C GG D L +P +E + H +++RDL
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 460 KPENVLVRDDGHIMLSDFDLSLR 482
K N+L DG I L+DF +S +
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAK 157
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 14/112 (12%)
Query: 565 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLF 619
R SF+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
Query: 620 NVVGQQ---LRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ + L P ++++ +D ++ L K + + +++ QHPF
Sbjct: 225 KIAKSEPPTLAQPSRWSSNF--KDFLKKCLEK----NVDARWTTSQLLQHPF 270
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 323 ARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
A D +L + L + +G G V T FA+K++D A S L+ +R
Sbjct: 16 ADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 383 E--ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFX 438
E I +L HP + L + +D +V E+ G DL +++ G +SE A
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLV---RDDGHIMLSDFDLSLRCAVS 486
H +++RD+KPENVL+ + + L DF ++++ S
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES 186
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
VGT ++APE++K E +G VD W G+ L LL G PF G+ R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 630 DSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+ S +++DL+R +L+ +P R+ V E HP+ +
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERITV----YEALNHPWLK 291
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F ++ LG G V+L + T FA+K + K+ L + E +L+ + H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSL---ENEIAVLKKIKHEN 67
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ TL +E+ LVM+ GG+L R + G ++E A H
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFD-RILERGV-YTEKDASLVIQQVLSAVKYLHEN 125
Query: 453 GVVYRDLKPENVLV---RDDGHIMLSDFDLS 480
G+V+RDLKPEN+L ++ IM++DF LS
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPD 630
GT Y+APE++ + + AVD W+ G+ + LL G PF + LF + + +
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY-EETESKLFEKIKEGYYEFE 227
Query: 631 SPA---TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTP 682
SP S +++D I LL K+P R ++ + HP+ +G N AL R P
Sbjct: 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
GT E+ APE+ +G+ G D W+ G+ + LL G +PF G + TL NV
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 630 DSP--ATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
DS S +D IR LL+ +P R+ + + +HP+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 414
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ H+ + + LG G G V+ +T FA K + + ++ + + E + + +L
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLR 212
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP L L+ FE D ++ E+ GG+L + K SE A
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 271
Query: 450 HMLGVVYRDLKPENVL--VRDDGHIMLSDFDLS 480
H V+ DLKPEN++ + + L DF L+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA---SRKK--LTRAQTEREILQLLDHP 391
K LG G G V L+ T A+K++ K A +R+ +TE EIL+ L+HP
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ + F+ + + +V+E GG+L + K E + H
Sbjct: 82 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 452 LGVVYRDLKPENVLV---RDDGHIMLSDF 477
G+++RDLKPENVL+ +D I ++DF
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGS 612
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L L G PF
Sbjct: 171 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
Query: 613 GNRATLFNVV--GQQLRFPDSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ +L + + G+ P+ A S + DL++ LLV +P+ R + E +HP+
Sbjct: 229 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWL 284
Query: 670 E 670
+
Sbjct: 285 Q 285
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA---SRKK--LTRAQTEREILQLLDHP 391
K LG G G V L+ T A+K++ K A +R+ +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ + F+ + + +V+E GG+L + K E + H
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 452 LGVVYRDLKPENVLV---RDDGHIMLSDF 477
G+++RDLKPENVL+ +D I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGS 612
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L L G PF
Sbjct: 165 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 613 GNRATLFNVV--GQQLRFPDSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ +L + + G+ P+ A S + DL++ LLV +P+ R + E +HP+
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWL 278
Query: 670 E 670
+
Sbjct: 279 Q 279
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA---SRKK--LTRAQTEREILQLLDHP 391
K LG G G V L+ T A+K++ K A +R+ +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ + F+ + + +V+E GG+L + K E + H
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 452 LGVVYRDLKPENVLV---RDDGHIMLSDF 477
G+++RDLKPENVL+ +D I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGS 612
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L L G PF
Sbjct: 165 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 613 GNRATLFNVV--GQQLRFPDSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ +L + + G+ P+ A S + DL++ LLV +P+ R + E +HP+
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWL 278
Query: 670 E 670
+
Sbjct: 279 Q 279
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL--ASRKKLTRAQTEREILQLLDH 390
+ L +G G G V ++ + TR A+K+M+K + + K + R +TE +++ L H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDL 418
P + LY +E +++ CLVME C GG L
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHL 115
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 571 GTHEYLAPEIIK--GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
GT ++APE++ E +G D W+ G+ LH LL G PF G + T+ V+ ++L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 629 --PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
P+ S +RDL+ LL + R R QHP+
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL----QHPW 333
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 63
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA---SRKK--LTRAQTEREILQLLDHP 391
K LG G G V L+ T A+K++ K A +R+ +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ + F+ + + +V+E GG+L + K E + H
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 452 LGVVYRDLKPENVLV---RDDGHIMLSDF 477
G+++RDLKPENVL+ +D I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGS 612
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L L G PF
Sbjct: 165 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 613 GNRATLFNVV--GQQLRFPDSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ +L + + G+ P+ A S + DL++ LLV +P+ R + E +HP+
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWL 278
Query: 670 E 670
+
Sbjct: 279 Q 279
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 568 SFVGTHEYLAPEIIKGE------GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
S GT YLAPEII+ G+G VD W+ G+ ++ LL G PF L +
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
Query: 622 VGQQLRF--PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+ +F P+ S +DL+ LV +PQ R A E HPFF+
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQ 288
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP + L +ET+ F LV + G+L + SE R
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICAL 140
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSP 487
H L +V+RDLKPEN+L+ DD +I L+DF S C + P
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDP 176
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA---SRKK--LTRAQTEREILQLLDHP 391
K LG G G V L+ T A+K++ K A +R+ +TE EIL+ L+HP
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ + F+ + + +V+E GG+L + K E + H
Sbjct: 75 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 452 LGVVYRDLKPENVLV---RDDGHIMLSDF 477
G+++RDLKPENVL+ +D I ++DF
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGS 612
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L L G PF
Sbjct: 164 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
Query: 613 GNRATLFNVV--GQQLRFPDSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ +L + + G+ P+ A S + DL++ LLV +P+ R + E +HP+
Sbjct: 222 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWL 277
Query: 670 E 670
+
Sbjct: 278 Q 278
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
GT E+ APE+ +G+ G D W+ G+ + LL G +PF G + TL NV
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 630 DSP--ATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
DS S +D IR LL+ +P R+ + + +HP+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+ H+ + + LG G G V+ +T FA K + + ++ + + E + + +L
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLR 106
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP L L+ FE D ++ E+ GG+L + K SE A
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 165
Query: 450 HMLGVVYRDLKPENVL--VRDDGHIMLSDFDLS 480
H V+ DLKPEN++ + + L DF L+
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR--KKLTRAQTEREILQLLDH 390
++L + LG G V T +A K+++ L++R +KL R E I +LL H
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRLLKH 62
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + L+ + F LV + GG+L +++SE A H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 451 MLGVVYRDLKPENVLVRDDGH---IMLSDFDLSL 481
+ G+V+RDLKPEN+L+ + L+DF L++
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT YL+PE+++ + +G VD W G+ L+ LL G PF + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 629 --PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVP 686
P+ + ++DLI +L P R+ A+E +HP W R + +
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRI----TASEALKHP------WICQRSTVASMMH 275
Query: 687 RPMEAELPGKFGA 699
R + KF A
Sbjct: 276 RQETVDCLKKFNA 288
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I ++L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHE 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 571 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
GT YLAPEII+ G+G VD W+ G+ ++ LL G PF L ++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 231
Query: 625 QLRF--PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+F P+ S +DL+ LV +PQ R A E HPFF+
Sbjct: 232 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQ 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP + L +ET+ F LV + G+L + SE R
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICAL 127
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSP 487
H L +V+RDLKPEN+L+ DD +I L+DF S C + P
Sbjct: 128 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDP 163
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 33/141 (23%)
Query: 571 GTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLHELLYGKTPFKGS------------- 612
G+ EY+APE+++ +++ D W+ G+ L+ LL G PF G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 613 -GNRATLFNVVGQ-QLRFPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ LF + + + FPD S A++DLI LLV++ + RL A ++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 669 FEGVNWALIRCSTPPEVPRPM 689
+G C+ +P PM
Sbjct: 299 VQG-------CAPENTLPTPM 312
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 403 DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPE 462
DRF LV E GG + L +HF+E A H G+ +RDLKPE
Sbjct: 84 DRFY-LVFEKMRGGSI--LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 463 NVLVRDDGH---IMLSDFDL 479
N+L + + DFDL
Sbjct: 141 NILCEHPNQVSPVKICDFDL 160
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 571 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
GT YLAPEII+ G+G VD W+ G+ ++ LL G PF L ++
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 625 QLRF--PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+F P+ S +DL+ LV +PQ R A E HPFF+
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQ 288
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP + L +ET+ F LV + G+L + SE R
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICAL 140
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSP 487
H L +V+RDLKPEN+L+ DD +I L+DF S C + P
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDP 176
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 33/141 (23%)
Query: 571 GTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLHELLYGKTPFKGS------------- 612
G+ EY+APE+++ +++ D W+ G+ L+ LL G PF G
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 613 -GNRATLFNVVGQ-QLRFPDS--PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ LF + + + FPD S A++DLI LLV++ + RL A ++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 669 FEGVNWALIRCSTPPEVPRPM 689
+G C+ +P PM
Sbjct: 299 VQG-------CAPENTLPTPM 312
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 403 DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPE 462
DRF LV E GG + L +HF+E A H G+ +RDLKPE
Sbjct: 84 DRFY-LVFEKMRGGSI--LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 463 NVLVRDDGH---IMLSDFDL 479
N+L + + DF L
Sbjct: 141 NILCEHPNQVSPVKICDFGL 160
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR--KKLTRAQTEREILQLLDH 390
++L + LG G V T +A K+++ L++R +KL R E I +LL H
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRLLKH 62
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + L+ + F LV + GG+L +++SE A H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 451 MLGVVYRDLKPENVLVRDDGH---IMLSDFDLSL 481
+ G+V+RDLKPEN+L+ + L+DF L++
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT YL+PE+++ + +G VD W G+ L+ LL G PF + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 629 --PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVP 686
P+ + ++DLI +L P R+ A+E +HP W R + +
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRI----TASEALKHP------WICQRSTVASMMH 275
Query: 687 RPMEAELPGKFGA 699
R + KF A
Sbjct: 276 RQETVDCLKKFNA 288
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
+ L++ LG G G V L+ T A+K++D K ++ + + + E I +L+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAMLNHE 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ Y H L +EYC GG+L + +P E A+ H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G+ +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
VGT ++APE++K E +G VD W G+ L LL G PF G+ R + G+ P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 255
Query: 630 DSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+ S +++DL+R +L+ +P R+ V E HP+ +
Sbjct: 256 RQWSHISESAKDLVRRMLMLDPAERITV----YEALNHPWLK 293
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 323 ARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
A D +L + L + +G G V T FA+K++D A S L+ +R
Sbjct: 18 ADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 77
Query: 383 E--ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFX 438
E I +L HP + L + +D +V E+ G DL +++ G +SE A
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLV 466
H +++RD+KP VL+
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLL 165
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
VGT ++APE++K E +G VD W G+ L LL G PF G+ R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 630 DSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+ S +++DL+R +L+ +P R+ V E HP+ +
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERITV----YEALNHPWLK 291
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 323 ARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
A D +L + L + +G G V T FA+K++D A S L+ +R
Sbjct: 16 ADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 383 E--ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFX 438
E I +L HP + L + +D +V E+ G DL +++ G +SE A
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLV 466
H +++RD+KP VL+
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLL 163
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA---SRKK--LTRAQTEREILQLLDHP 391
K LG G G V L+ T A++++ K A +R+ +TE EIL+ L+HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ + F+ + + +V+E GG+L + K E + H
Sbjct: 201 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 452 LGVVYRDLKPENVLV---RDDGHIMLSDF 477
G+++RDLKPENVL+ +D I ++DF
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGS 612
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L L G PF
Sbjct: 290 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
Query: 613 GNRATLFNVV--GQQLRFPDSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ +L + + G+ P+ A S + DL++ LLV +P+ R + E +HP+
Sbjct: 348 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWL 403
Query: 670 E 670
+
Sbjct: 404 Q 404
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
E R + GT Y+APE++ +GH VD W+ G ++ LL GK PF+ S + T
Sbjct: 171 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 230
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
+ + P AS LI+ +L +P R
Sbjct: 231 LRIKKNEYSIPKHINPVAAS--LIQKMLQTDPTAR 263
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G + + T+ FA K++ K+ L + + E I + L H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 459 LKPENVLVRDDGHIMLSDFDLSLR 482
LK N+ + +D + + DF L+ +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATK 170
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
E R + GT Y+APE++ +GH VD W+ G ++ LL GK PF+ S + T
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
+ + P AS LI+ +L +P R
Sbjct: 227 LRIKKNEYSIPKHINPVAAS--LIQKMLQTDPTAR 259
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G + + T+ FA K++ K+ L + + E I + L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 459 LKPENVLVRDDGHIMLSDFDLSLR 482
LK N+ + +D + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
E R + GT Y+APE++ +GH VD W+ G ++ LL GK PF+ S + T
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
+ + P AS LI+ +L +P R
Sbjct: 227 LRIKKNEYSIPKHINPVAAS--LIQKMLQTDPTAR 259
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G + + T+ FA K++ K+ L + + E I + L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 459 LKPENVLVRDDGHIMLSDFDLSLR 482
LK N+ + +D + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA---SRKK--LTRAQTEREILQLLDHP 391
K LG G G V L+ T A++++ K A +R+ +TE EIL+ L+HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ + F+ + + +V+E GG+L + K E + H
Sbjct: 215 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 452 LGVVYRDLKPENVLV---RDDGHIMLSDF 477
G+++RDLKPENVL+ +D I ++DF
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGS 612
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L L G PF
Sbjct: 304 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
Query: 613 GNRATLFNVV--GQQLRFPDSPA-TSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ +L + + G+ P+ A S + DL++ LLV +P+ R + E +HP+
Sbjct: 362 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWL 417
Query: 670 E 670
+
Sbjct: 418 Q 418
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 314 RWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASR 372
R +A L + + G L F + LG G+ G V+ + A K++ + A R
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 110
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSE 432
++ R E ++L + P++ Y F +D + ME+ GG L + ++ G+ +
Sbjct: 111 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQ 166
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ +++RD+KP N+LV G I L DF +S
Sbjct: 167 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
E R GT Y+APE++ +GH VD W+ G ++ LL GK PF+ S + T
Sbjct: 191 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 250
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
+ + P AS LI+ +L +P R
Sbjct: 251 LRIKKNEYSIPKHINPVAAS--LIQKMLQTDPTAR 283
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G + + T+ FA K++ K+ L + + E I + L H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 459 LKPENVLVRDDGHIMLSDFDLSLR 482
LK N+ + +D + + DF L+ +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATK 190
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
E R GT Y+APE++ +GH VD W+ G ++ LL GK PF+ S + T
Sbjct: 189 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 248
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
+ + P AS LI+ +L +P R
Sbjct: 249 LRIKKNEYSIPKHINPVAAS--LIQKMLQTDPTAR 281
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G + + T+ FA K++ K+ L + + E I + L H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 459 LKPENVLVRDDGHIMLSDFDLSLR 482
LK N+ + +D + + DF L+ +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATK 188
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F +L++LG G GSVY + T A+K + L E I+Q D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK-----QVPVESDLQEIIKEISIMQQCDSPH 85
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ Y + + +VMEYC G + + R K +E H +
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RD+K N+L+ +GH L+DF ++
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 564 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
A+ +GT ++APE+I+ G+ D W+ GI E+ GK P+ +F +
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
Query: 624 Q---QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
R P+ + ++ D ++ LVK P+ R AT++ QHPF
Sbjct: 240 NPPPTFRKPELWSDNFT--DFVKQCLVKSPEQR----ATATQLLQHPF 281
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDSP- 632
EY APE+ + + +A D W+ G ++ LL G PF N+ + N++ + F +
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 633 -ATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF----EGVNWALIR 678
S + D + LLVKE + R+ A+E QHP+ E V+ +IR
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLKQKIERVSTKVIR 274
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
E R GT Y+APE++ +GH VD W+ G ++ LL GK PF+ S + T
Sbjct: 165 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 224
Query: 619 FNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
+ + P AS LI+ +L +P R
Sbjct: 225 LRIKKNEYSIPKHINPVAAS--LIQKMLQTDPTAR 257
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G + + T+ FA K++ K+ L + + E I + L H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRD 458
FE + F +V+E C L L +R+ K +E AR+ H V++RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 459 LKPENVLVRDDGHIMLSDFDLSLR 482
LK N+ + +D + + DF L+ +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATK 164
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 331 SHFRLLKR-LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+H LL LG G +V+ T FA+KV + S + + E E+L+ L+
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN 65
Query: 390 HPFLPTLYTHFE--TDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
H + L+ E T R L+ME+CP G L+T+ + +P + + F
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGG 124
Query: 448 XXHML--GVVYRDLKPENVL--VRDDGHIM--LSDF 477
H+ G+V+R++KP N++ + +DG + L+DF
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 567 MSFVGTHEYLAPEIIK--------GEGHGSAVDWWTFGIFLHELLYGKTPFK 610
+ GT EYL P++ + + +G+ VD W+ G+ + G PF+
Sbjct: 173 VXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
++ + + LG G V +T FA K+++ L++R + + E I + L HP
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 88
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ L+ + + F LV + GG+L + +SE A H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 452 LGVVYRDLKPENVLVRDDGH---IMLSDFDLSL 481
G+V+R+LKPEN+L+ + L+DF L++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT YL+PE++K + + VD W G+ L+ LL G PF + +
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 629 --PDSPATSYASRDLIRGLLVKEPQHRL 654
P+ + ++ LI +L P+ R+
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 313 PRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR 372
P+++ A+R G +++FR+ K++G G VY + A+K + L
Sbjct: 14 PQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA 73
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDL-----HTLRQRQ-- 425
K E ++L+ L+HP + Y F D +V+E GDL H +Q++
Sbjct: 74 KARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI 133
Query: 426 PGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
P + +Y + H V++RD+KP NV + G + L D L
Sbjct: 134 PERTVWKYFVQL-----CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 182
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
++ TAA S+ VGT Y++PE I G+ D W+ G L+E+ ++PF G++ L
Sbjct: 188 SKTTAAHSL--VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF--YGDKMNL 243
Query: 619 FNVVG--QQLRFPDSPATSYAS--RDLIRGLLVKEPQHR 653
+++ +Q +P P+ Y+ R L+ + +P+ R
Sbjct: 244 YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
F GT YL+PE+++ E +G VD W G+ L+ LL G PF +
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 223
Query: 627 RF--PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
F P+ + +++LI +L P R+ A E +HP W R +
Sbjct: 224 DFPSPEWDTVTPEAKNLINQMLTINPAKRI----TAHEALKHP------WVCQRSTVASM 273
Query: 685 VPRPMEAELPGKFGA 699
+ R E KF A
Sbjct: 274 MHRQETVECLKKFNA 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR--KKLTRAQTEREILQLLDH 390
++L + +G G V T +A K+++ L++R +KL R E I +LL H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER---EARICRLLKH 62
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ L+ + F LV + GG+L +++SE A H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 451 MLGVVYRDLKPENVLVRDD---GHIMLSDFDLSL 481
+GVV+RDLKPEN+L+ + L+DF L++
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 331 SHFRLLKR-LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
+H LL LG G +V+ T FA+KV + S + + E E+L+ L+
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLN 65
Query: 390 HPFLPTLYTHFE--TDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
H + L+ E T R L+ME+CP G L+T+ + +P + + F
Sbjct: 66 HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGG 124
Query: 448 XXHML--GVVYRDLKPENVL--VRDDGHIM--LSDF 477
H+ G+V+R++KP N++ + +DG + L+DF
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Query: 567 MSFVGTHEYLAPEIIK--------GEGHGSAVDWWTFGIFLHELLYGKTPFK 610
+S GT EYL P++ + + +G+ VD W+ G+ + G PF+
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
MS G + ++APE+I+ D W++G+ L ELL G+ PF+G A + V +L
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL 231
Query: 627 RFP 629
P
Sbjct: 232 ALP 234
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLR--QRQPGKHF 430
+ + + E ++ +L HP + L + CLVME+ GG L+ + +R P
Sbjct: 48 QTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL 107
Query: 431 SEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLV 466
+A + ++ +++RDLK N+L+
Sbjct: 108 VNWAVQIARGMNYLHDEA--IVPIIHRDLKSSNILI 141
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 325 DGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR--KKLTRAQTER 382
+ + S ++L + LG G V +A K+++ L++R +KL R E
Sbjct: 16 ENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER---EA 72
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
I +LL HP + L+ + L+ + GG+L +++SE A
Sbjct: 73 RICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQI 130
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDD---GHIMLSDFDLSL 481
H +GVV+RDLKPEN+L+ + L+DF L++
Sbjct: 131 LEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
F GT YL+PE+++ + +G VD W G+ L+ LL G PF +
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 241
Query: 627 RF--PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
F P+ + ++DLI +L P R+ A E +HP+
Sbjct: 242 DFPSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPWI 282
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 314 RWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASR 372
R +A L + + G L F + LG G+ G V+ + A K++ + A R
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 75
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSE 432
++ R E ++L + P++ Y F +D + ME+ GG L + ++ G+ +
Sbjct: 76 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQ 131
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ +++RD+KP N+LV G I L DF +S
Sbjct: 132 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
++ + + LG G V +T FA K+++ L++R + + E I + L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ L+ + + F LV + GG+L + +SE A H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 452 LGVVYRDLKPENVLVRDDGH---IMLSDFDLSL 481
G+V+R+LKPEN+L+ + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT YL+PE++K + + VD W G+ L+ LL G PF + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 629 --PDSPATSYASRDLIRGLLVKEPQHRL 654
P+ + ++ LI +L P+ R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
++ + + LG G V +T FA K+++ L++R + + E I + L HP
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ L+ + + F LV + GG+L + +SE A H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 452 LGVVYRDLKPENVLVRDDGH---IMLSDFDLSL 481
G+V+R+LKPEN+L+ + L+DF L++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT YL+PE++K + + VD W G+ L+ LL G PF + +
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 629 --PDSPATSYASRDLIRGLLVKEPQHRL 654
P+ + ++ LI +L P+ R+
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
++ + + LG G V +T FA K+++ L++R + + E I + L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ L+ + + F LV + GG+L + +SE A H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 452 LGVVYRDLKPENVLVRDDGH---IMLSDFDLSL 481
G+V+R+LKPEN+L+ + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
F GT YL+PE++K + + VD W G+ L+ LL G PF + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 629 --PDSPATSYASRDLIRGLLVKEPQHRL 654
P+ + ++ LI +L P+ R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F L+R+G G G V+ + T+ A+K++D Q E +L D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSSY 82
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ Y + ++MEY GG L + P F E+ H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSE 139
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQP 512
++RD+K NVL+ + G + L+DF ++ ++ T IK ++ P F + P
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTP--------FWMAP 189
Query: 513 ACIEPSS 519
I+ S+
Sbjct: 190 EVIQQSA 196
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTP 608
T + +FVGT ++APE+I+ + S D W+ GI EL G+ P
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD--- 389
F L++ +G G G VY T A+KVMD E EI Q ++
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----------VTGDEEEEIKQEINMLK 75
Query: 390 ----HPFLPTLYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
H + T Y F D LVME+C G + L + G E +
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RD+K +NVL+ ++ + L DF +S
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 25/121 (20%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLHELLYGKTPFKGSGNRA 616
T R +F+GT ++APE+I + + A D W+ GI E+ G P
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241
Query: 617 TLFNVVGQQLRFPDSPATSYASRD-------LIRGLLVKEPQHRLGVKRGATE-IKQHPF 668
LF + P +PA S+ I LVK +R ATE + +HPF
Sbjct: 242 ALFLI-------PRNPAPRLKSKKWSKKFQSFIESCLVKNHS-----QRPATEQLMKHPF 289
Query: 669 F 669
Sbjct: 290 I 290
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR--KKLTRAQTEREILQLLDH 390
++L + LG G V + +A K+++ L++R +KL R E I +LL H
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARICRLLKH 89
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + L+ + F LV + GG+L +++SE A H
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 451 MLGVVYRDLKPENVLVRDD---GHIMLSDFDLSL 481
+V+RDLKPEN+L+ + L+DF L++
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
F GT YL+PE+++ + +G VD W G+ L+ LL G PF +
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 250
Query: 627 RF--PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
F P+ + +++LI +L P R+ A + +HP W R +
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTINPAKRI----TADQALKHP------WVCQRSTVASM 300
Query: 685 VPRPMEAELPGKFGA 699
+ R E KF A
Sbjct: 301 MHRQETVECLRKFNA 315
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 24/139 (17%)
Query: 546 ELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWT 594
+ G+ + P+ T+ S VGT Y+ PE IK D W+
Sbjct: 197 DFGIANQMQPD----TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252
Query: 595 FGIFLHELLYGKTPFKGSGNRATLFNVV---GQQLRFPDSPATSYASRDLIRGLLVKEPQ 651
G L+ + YGKTPF+ N+ + + + ++ FPD P +D+++ L ++P+
Sbjct: 253 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPK 310
Query: 652 HRLGVKRGATEIKQHPFFE 670
R+ + E+ HP+ +
Sbjct: 311 QRISI----PELLAHPYVQ 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH-- 390
+ +LK++G G V+ L+ + +A+K ++ A + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ LY + TD++ +VME C DL++ +++ K + + H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKG--SGNRATLFNVVGQ---QL 626
T ++APE++K +G+ D W+ GI L+ +L G TPF S + +G L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ S ++DL+ +L +P RL K ++ QHP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAK----QVLQHPW 285
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 354 STRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYC 413
+T +A+KV+DK+ K ++ +L+ HP + TL ++ + LV E
Sbjct: 50 ATNMEYAVKVIDKS------KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELM 103
Query: 414 PGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDD 469
GG+L RQ K FSE A F H GVV+RDLKP N+L D+
Sbjct: 104 RGGELLDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDE 157
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKG--SGNRATLFNVVGQ---QL 626
T ++APE++K +G+ D W+ GI L+ +L G TPF S + +G L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 627 RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPF 668
+ S ++DL+ +L +P RL K ++ QHP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAK----QVLQHPW 285
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 354 STRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYC 413
+T +A+KV+DK+ K ++ +L+ HP + TL ++ + LV E
Sbjct: 50 ATNMEYAVKVIDKS------KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELM 103
Query: 414 PGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDD 469
GG+L RQ K FSE A F H GVV+RDLKP N+L D+
Sbjct: 104 RGGELLDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDE 157
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 314 RWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASR 372
R +A L + + G L F + LG G+ G V+ + A K++ + A R
Sbjct: 8 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 67
Query: 373 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSE 432
++ R E ++L + P++ Y F +D + ME+ GG L + ++ G+ +
Sbjct: 68 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQ 123
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ +++RD+KP N+LV G I L DF +S
Sbjct: 124 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P +F ++ +
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN 240
Query: 628 FP----DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF-----EGVNWALIR 678
P S S +D + L+K P R +K ++ H F E V++A
Sbjct: 241 EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK----QLMVHAFIKRSDAEEVDFAGWL 296
Query: 679 CST 681
CST
Sbjct: 297 CST 299
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEIIKG-----------EGHGSAVDWWTFGIFLHELLY 604
++ + T+ S VGT Y+ PE IK D W+ G L+ + Y
Sbjct: 203 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Query: 605 GKTPFKGSGNRATLFNVV---GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGAT 661
GKTPF+ N+ + + + ++ FPD P +D+++ L ++P+ R+ +
Sbjct: 263 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----P 316
Query: 662 EIKQHPFFE 670
E+ HP+ +
Sbjct: 317 ELLAHPYVQ 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH-- 390
+ +LK++G G V+ L+ + +A+K ++ A + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ LY + TD++ +VME C DL++ +++ K + + H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 556 ELVAEPTAARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTFGIFLHELLY 604
++ + T+ S VGT Y+ PE IK D W+ G L+ + Y
Sbjct: 159 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 218
Query: 605 GKTPFKGSGNRATLFNVV---GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGAT 661
GKTPF+ N+ + + + ++ FPD P +D+++ L ++P+ R+ +
Sbjct: 219 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----P 272
Query: 662 EIKQHPFFE 670
E+ HP+ +
Sbjct: 273 ELLAHPYVQ 281
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH-- 390
+ +LK++G G V+ L+ + +A+K ++ A + L + E L L
Sbjct: 14 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 71
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ LY + TD++ +VME C DL++ +++ K + + H
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 128
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 129 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 157
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLL 388
M + + ++G G G V+ T A+K ++ KK+ A E +L+ L
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI--ALREIRMLKQL 59
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP L L F R LV EYC LH L + Q G E+ +
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNF 117
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H ++RD+KPEN+L+ I L DF +
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFA 149
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGN-------RATLFNV 621
V T Y +PE++ G+ +G VD W G ELL G + G + R TL ++
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 622 VGQQ------------LRFPDS----------PATSYASRDLIRGLLVKEPQHRLGVKRG 659
+ + ++ PD P SY + L++G L +P RL +
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCE-- 280
Query: 660 ATEIKQHPFFEGV 672
++ HP+FE +
Sbjct: 281 --QLLHHPYFENI 291
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F L+++G G G V+ + T+ A+K++D Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSPY 66
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ Y + D ++MEY GG L + P E H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQP 512
++RD+K NVL+ + G + L+DF ++ ++ T IK ++ P F + P
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTP--------FWMAP 173
Query: 513 ACIEPSS 519
I+ S+
Sbjct: 174 EVIKQSA 180
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
T + +FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 622 VGQQLRFPDSPATSYAS--RDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P + +Y+ ++ + L KEP R A E+ +H F
Sbjct: 217 PKNN---PPTLEGNYSKPLKEFVEACLNKEPSFR----PTAKELLKHKFI 259
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 324 RDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
R+ I + + + +G G +T FA+K++DK+ R TE E
Sbjct: 15 RNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK--------RDPTE-E 65
Query: 384 ILQLL---DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
I LL HP + TL ++ ++ +V E GG+L RQ K FSE A
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ--KFFSEREASAVLF 123
Query: 441 XXXXXXXXXHMLGVVYRDLKPENVLVRDDG----HIMLSDFDLSLRCAVSPTLIKT 492
H GVV+RDLKP N+L D+ I + DF + + L+ T
Sbjct: 124 TITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFK--------------GSGNRAT 617
T ++APE+++ +G+ +A D W+ G+ L+ L G TPF GSG
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGK--- 239
Query: 618 LFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNW 674
F++ G + S ++DL+ L +P RL A + +HP+ V+W
Sbjct: 240 -FSLSGGYWN-----SVSDTAKDLVSKXLHVDPHQRL----TAALVLRHPWI--VHW 284
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 20/180 (11%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F L+++G G G V+ + T+ A+K++D Q E +L D P+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSPY 81
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ Y + D ++MEY GG L + P E H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 138
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCA---------------VSPTLIKTSSLDS 497
++RD+K NVL+ + G + L+DF ++ + ++P +IK S+ DS
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 198
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
T + FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 172 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
Query: 622 VGQQLRFPDSPATSYAS--RDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P + +Y+ ++ + L KEP R A E+ +H F
Sbjct: 232 PKNN---PPTLEGNYSKPLKEFVEACLNKEPSFR----PTAKELLKHKFI 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F L+++G G G V+ + T+ A+K++D Q E +L D P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSPY 86
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ Y + D ++MEY GG L + P E H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 143
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQP 512
++RD+K NVL+ + G + L+DF ++ ++ T IK ++ P F + P
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTP--------FWMAP 193
Query: 513 ACIEPSS 519
I+ S+
Sbjct: 194 EVIKQSA 200
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
T + +FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
Query: 622 VGQQLRFPDSPATSYAS--RDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P + +Y+ ++ + L KEP R A E+ +H F
Sbjct: 237 PKNN---PPTLEGNYSKPLKEFVEACLNKEPSFR----PTAKELLKHKFI 279
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 24/139 (17%)
Query: 546 ELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWT 594
+ G+ + P+ T+ S VGT Y+ PE IK D W+
Sbjct: 149 DFGIANQMQPD----TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 204
Query: 595 FGIFLHELLYGKTPFKGSGNRATLFNVV---GQQLRFPDSPATSYASRDLIRGLLVKEPQ 651
G L+ + YGKTPF+ N+ + + + ++ FPD P +D+++ L ++P+
Sbjct: 205 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPK 262
Query: 652 HRLGVKRGATEIKQHPFFE 670
R+ + E+ HP+ +
Sbjct: 263 QRISI----PELLAHPYVQ 277
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH-- 390
+ +LK++G G V+ L+ + +A+K ++ A + L + E L L
Sbjct: 10 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 67
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ LY + TD++ +VME C DL++ +++ K + + H
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 124
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 125 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 153
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 324 RDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
R+ I + + + +G G +T FA+K++DK+ R TE E
Sbjct: 15 RNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK--------RDPTE-E 65
Query: 384 ILQLL---DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
I LL HP + TL ++ ++ +V E GG+L RQ K FSE A
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLF 123
Query: 441 XXXXXXXXXHMLGVVYRDLKPENVLVRDDG----HIMLSDFDLSLRCAVSPTLIKT 492
H GVV+RDLKP N+L D+ I + DF + + L+ T
Sbjct: 124 TITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 29/117 (24%)
Query: 572 THEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFK--------------GSGNRAT 617
T ++APE+++ +G+ +A D W+ G+ L+ +L G TPF GSG
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--- 239
Query: 618 LFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNW 674
F++ G + S ++DL+ +L +P RL A + +HP+ V+W
Sbjct: 240 -FSLSGGYWN-----SVSDTAKDLVSKMLHVDPHQRL----TAALVLRHPWI--VHW 284
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 24/139 (17%)
Query: 546 ELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKG-----------EGHGSAVDWWT 594
+ G+ + P+ T+ S VGT Y+ PE IK D W+
Sbjct: 150 DFGIANQMQPD----TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 205
Query: 595 FGIFLHELLYGKTPFKGSGNRATLFNVV---GQQLRFPDSPATSYASRDLIRGLLVKEPQ 651
G L+ + YGKTPF+ N+ + + + ++ FPD P +D+++ L ++P+
Sbjct: 206 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPK 263
Query: 652 HRLGVKRGATEIKQHPFFE 670
R+ + E+ HP+ +
Sbjct: 264 QRISI----PELLAHPYVQ 278
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH-- 390
+ +LK++G G V+ L+ + +A+K ++ A + L + E L L
Sbjct: 11 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 68
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ LY + TD++ +VME C DL++ +++ K + + H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 125
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 126 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 154
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 24/139 (17%)
Query: 546 ELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWT 594
+ G+ + P+ T+ S VGT Y+ PE IK D W+
Sbjct: 169 DFGIANQMQPD----TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224
Query: 595 FGIFLHELLYGKTPFKGSGNRATLFNVV---GQQLRFPDSPATSYASRDLIRGLLVKEPQ 651
G L+ + YGKTPF+ N+ + + + ++ FPD P +D+++ L ++P+
Sbjct: 225 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPK 282
Query: 652 HRLGVKRGATEIKQHPFFE 670
R+ + E+ HP+ +
Sbjct: 283 QRISI----PELLAHPYVQ 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH-- 390
+ +LK++G G V+ L+ + +A+K ++ A + L + E L L
Sbjct: 30 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ LY + TD++ +VME C DL++ +++ K + + H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 21/122 (17%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
VGT ++APE+I + + VD W+ GI + E++ G+ P+ V R
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQAMKRL 253
Query: 629 PDSP--------ATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCS 680
DSP S RD + +LV++PQ R A E+ HPF + L C
Sbjct: 254 RDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER----ATAQELLDHPFL--LQTGLPECL 307
Query: 681 TP 682
P
Sbjct: 308 VP 309
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 316 KAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKK 374
+A L +A+ G L F + LG G+ G V + + A K++ + A R +
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ 60
Query: 375 LTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYA 434
+ R E ++L + P++ Y F +D + ME+ GG L + ++ + E
Sbjct: 61 IIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KEAKRIPEEIL 116
Query: 435 ARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ +++RD+KP N+LV G I L DF +S
Sbjct: 117 GKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
SFVGT Y+APE ++G + D W+ G+ L EL G+ P
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 20/180 (11%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F L+++G G G V+ + T+ A+K++D Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSPY 66
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ Y + D ++MEY GG L + P E H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCA---------------VSPTLIKTSSLDS 497
++RD+K NVL+ + G + L+DF ++ + ++P +IK S+ DS
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
T + FVGT ++APE+IK + S D W+ GI EL G+ P LF +
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 622 VGQQLRFPDSPATSYAS--RDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P + +Y+ ++ + L KEP R A E+ +H F
Sbjct: 217 PKNN---PPTLEGNYSKPLKEFVEACLNKEPSFR----PTAKELLKHKFI 259
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 119/351 (33%), Gaps = 101/351 (28%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S F + LG G G V + + Y+A+K + + +KL+ +E +L L+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNH 61
Query: 391 PFLPTLYTHFETDRFSC-------------LVMEYCPGGDLHTL-RQRQPGKHFSEYAAR 436
++ Y + R + MEYC G L+ L + EY
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 437 FXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLD 496
F H G+++RDLKP N+ +
Sbjct: 122 FRQILEALSYI--HSQGIIHRDLKPMNIFI------------------------------ 149
Query: 497 SDPSRRGPGGSFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPE 556
D SR G F + K + L L S LP
Sbjct: 150 -DESRNVKIGDFGLA--------------------------KNVHRSLDILKLDSQNLPG 182
Query: 557 LVAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNR 615
T+A +GT Y+A E++ G GH +D ++ GI E++Y PF R
Sbjct: 183 SSDNLTSA-----IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER 234
Query: 616 ATLFNVVGQQLR---------FPDSPATSYASRDLIRGLLVKEPQHRLGVK 657
+ ++LR F D+ + +IR L+ +P R G +
Sbjct: 235 VNIL----KKLRSVSIEFPPDFDDNKMK--VEKKIIRLLIDHDPNKRPGAR 279
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 568 SFVGTHEYLAPEIIKGEGHG-----------SAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
S VGT Y+ PE IK D W+ G L+ + YGKTPF+ N+
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 617 TLFNVV---GQQLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
+ + + ++ FPD P +D+++ L ++P+ R+ + E+ HP+ +
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRISI----PELLAHPYVQ 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH-- 390
+ +LK++G G V+ L+ + +A+K ++ A + L + E L L
Sbjct: 30 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ LY + TD++ +VME C DL++ +++ K + + H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 567 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
F GT YL+PE+++ + +G VD W G+ L+ LL G PF +
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 230
Query: 627 RF--PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
F P+ + ++DLI +L P R+ A E +HP+
Sbjct: 231 DFPSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPWI 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASR--KKLTRAQTEREILQLLDH 390
++L + LG G V +A +++ L++R +KL R E I +LL H
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRLLKH 69
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + L+ + L+ + GG+L +++SE A H
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 451 MLGVVYRDLKPENVLVRDD---GHIMLSDFDLSL 481
+GVV+R+LKPEN+L+ + L+DF L++
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M ++ L+++G G G VY ++ S R + + + L + + + REI L+
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGR----IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L HP + +L ++R LV E+ L + + G S+ +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ--IKIYLYQLLRGVA 133
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP+N+L+ DG + L+DF L+
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 38/136 (27%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL---FNVV 622
THE Y AP+++ G + + ++VD W+ G E++ GK F G + L F+++
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236
Query: 623 G----------QQL---------RFPDSPATSYA------SRDLIRGLLVKEPQHRLGVK 657
G Q+L F P +S DL+ +L +P R+
Sbjct: 237 GTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI--- 293
Query: 658 RGATEIKQHPFFEGVN 673
A + HP+F+ ++
Sbjct: 294 -SARDAMNHPYFKDLD 308
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M ++ L+++G G G VY ++ S R + + + L + + + REI L+
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGR----IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L HP + +L ++R LV E+ L + + G S+ +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ--IKIYLYQLLRGVA 133
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP+N+L+ DG + L+DF L+
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 38/136 (27%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL---FNVV 622
THE Y AP+++ G + + ++VD W+ G E++ GK F G + L F+++
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236
Query: 623 G----------QQL---------RFPDSPATSYA------SRDLIRGLLVKEPQHRLGVK 657
G Q+L F P +S DL+ +L +P R+
Sbjct: 237 GTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI--- 293
Query: 658 RGATEIKQHPFFEGVN 673
A + HP+F+ ++
Sbjct: 294 -SARDAMNHPYFKDLD 308
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 546 ELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKG-----------EGHGSAVDWWT 594
+ G+ + P+ T+ S VG Y+ PE IK D W+
Sbjct: 197 DFGIANQMQPD----TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252
Query: 595 FGIFLHELLYGKTPFKGSGNRATLFNVV---GQQLRFPDSPATSYASRDLIRGLLVKEPQ 651
G L+ + YGKTPF+ N+ + + + ++ FPD P +D+++ L ++P+
Sbjct: 253 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPK 310
Query: 652 HRLGVKRGATEIKQHPFFE 670
R+ + E+ HP+ +
Sbjct: 311 QRISI----PELLAHPYVQ 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH-- 390
+ +LK++G G V+ L+ + +A+K ++ A + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ LY + TD++ +VME C DL++ +++ K + + H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+V+ DLKP N L+ DG + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 2/145 (1%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F L+ +G G G+VY + A+K M + S +K E LQ L HP
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ + + LVMEYC G L + E AA H
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA--VTHGALQGLAYLHSH 173
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDF 477
+++RD+K N+L+ + G + L DF
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDF 198
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 569 FVGTHEYLAPEIIKGEGHGS---AVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
FVGT ++APE+I G VD W+ GI EL K P + L+++ +
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 269
Query: 626 LRFPDSPATSYASRDLIRGLLVKEPQHR 653
S S R+ + L K PQ R
Sbjct: 270 SPALQSGHWSEYFRNFVDSCLQKIPQDR 297
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 15/187 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F L R+G G G VY + T+ A+K++D Q E +L D P+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI--EDIQQEITVLSQCDSPY 78
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ + + ++MEY GG L +PG Y A H
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGS--ALDLLKPGPLEETYIATILREILKGLDYL-HSE 135
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRRGPGGSFCVQP 512
++RD+K NVL+ + G + L+DF ++ ++ T IK + P F + P
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTP--------FWMAP 185
Query: 513 ACIEPSS 519
I+ S+
Sbjct: 186 EVIKQSA 192
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTP 608
T + FVGT ++APE+IK + D W+ GI EL G+ P
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 289 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 325
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 123
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 124 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
F + LG G+ G V+ + A K++ + A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
++ Y F +D + ME+ GG L + ++ G+ + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+++RD+KP N+LV G I L DF +S
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF------KGSGNRATLFNV 621
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P + S +F +
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL 221
Query: 622 VGQQLRFP----DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF-----EGV 672
+ + P S S +D + L+K P R +K ++ H F E V
Sbjct: 222 LDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK----QLMVHAFIKRSDAEEV 277
Query: 673 NWALIRCST 681
++A CST
Sbjct: 278 DFAGWLCST 286
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 294
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 295 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 331
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 129
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 130 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 189 AHRDVKPENLLYTSKRPNAILKLTDFGFA 217
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 243 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 279
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 77
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 78 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 243 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 279
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 77
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 78 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 245 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 281
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 79
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 80 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 2/145 (1%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
F L+ +G G G+VY + A+K M + S +K E LQ L HP
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ + + LVMEYC G L + E AA H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA--VTHGALQGLAYLHSH 134
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDF 477
+++RD+K N+L+ + G + L DF
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDF 159
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 569 FVGTHEYLAPEIIKGEGHGS---AVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
FVGT ++APE+I G VD W+ GI EL K P + L+++ +
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 230
Query: 626 LRFPDSPATSYASRDLIRGLLVKEPQHR 653
S S R+ + L K PQ R
Sbjct: 231 SPALQSGHWSEYFRNFVDSCLQKIPQDR 258
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
++++ +LG G + +VYL+E + A+K + + L R + E L H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
+ ++ E D LVMEY G L + G + A F H +
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINF-TNQILDGIKHAHDM 130
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPT 488
+V+RD+KP+N+L+ D + L FD + A+S T
Sbjct: 131 RIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSET 164
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 554 LPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKG 611
+ + ++E + ++ +GT +Y +PE KGE D ++ GI L+E+L G+ PF G
Sbjct: 157 IAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
F + LG G+ G V+ + A K++ + A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
++ Y F +D + ME+ GG L + ++ G+ + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+++RD+KP N+LV G I L DF +S
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + +A + Q FP+
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPR 687
P S S D LIR LL +P RL + T+ HP+ +N +++ TP R
Sbjct: 255 -PEWSEVSEDAKQLIRLLLKTDPTERLTI----TQFMNHPW---INQSMVVPQTPLHTAR 306
Query: 688 PMEAE 692
++ +
Sbjct: 307 VLQED 311
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R ++ME GG+L + Q + + F+E A H + +RD+KPEN
Sbjct: 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 464 VLV---RDDGHIMLSDFDLS 480
+L D + L+DF +
Sbjct: 159 LLYTSKEKDAVLKLTDFGFA 178
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 243
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 244 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 280
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 78
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 79 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 138 AHRDVKPENLLYTSKRPNAILKLTDFGFA 166
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 248
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 249 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 285
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 83
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 84 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 143 AHRDVKPENLLYTSKRPNAILKLTDFGFA 171
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 245 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 281
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 79
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 80 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
F + LG G+ G V+ + A K++ + A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
++ Y F +D + ME+ GG L + ++ G+ + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+++RD+KP N+LV G I L DF +S
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 250
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 251 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 287
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 85
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 86 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 145 AHRDVKPENLLYTSKRPNAILKLTDFGFA 173
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + +A + Q FP+
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 235
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPR 687
P S S D LIR LL +P RL + T+ HP+ +N +++ TP R
Sbjct: 236 -PEWSEVSEDAKQLIRLLLKTDPTERLTI----TQFMNHPW---INQSMVVPQTPLHTAR 287
Query: 688 PMEAE 692
++ +
Sbjct: 288 VLQED 292
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R ++ME GG+L + Q + + F+E A H + +RD+KPEN
Sbjct: 80 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 139
Query: 464 VLV---RDDGHIMLSDFDLS 480
+L D + L+DF +
Sbjct: 140 LLYTSKEKDAVLKLTDFGFA 159
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL-TRAQTEREILQLLD 389
S F+ L++LG G +VY +T Y A+K + L S + + A E +++ L
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALK---EVKLDSEEGTPSTAIREISLMKELK 61
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPG---KHFSEYAARFXXXXXXXXX 446
H + LY T+ LV E+ + R G + ++
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP+N+L+ G + L DF L+
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 544 RSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHEL 602
R +L L L P S S V T Y AP+++ G + +++D W+ G L E+
Sbjct: 144 RGQLKLGDFGLARAFGIPVNTFS-SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM 202
Query: 603 LYGKTPFKGSGNRATL---FNVVG 623
+ GK F G+ + L F+++G
Sbjct: 203 ITGKPLFPGTNDEEQLKLIFDIMG 226
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 249
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 250 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 286
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 84
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 85 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 144 AHRDVKPENLLYTSKRPNAILKLTDFGFA 172
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 561 PTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN 620
P ++ + VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 621 VVGQ---QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFE 670
+ +L+ P+ + + RD + L + + KRG A E+ QH F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVE-----KRGSAKELIQHQFLK 275
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ ++ LL G PF + A + Q FP+
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 258
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R+ + TE HP+
Sbjct: 259 -PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 295
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 93
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 94 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 153 AHRDVKPENLLYTSKRPNAILKLTDFGFA 181
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
F + LG G+ G V+ + A K++ + A R ++ R E ++L + P
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 67
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
++ Y F +D + ME+ GG L + ++ G+ + +
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+++RD+KP N+LV G I L DF +S
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
FVGT Y++PE ++G + D W+ G+ L E+ G+ P L +V +
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPK 225
Query: 629 PDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF-----EGVNWALIRCST 681
S S +D + L+K P R +K ++ H F E V++A CST
Sbjct: 226 LPSAVFSLEFQDFVNKCLIKNPAERADLK----QLMVHAFIKRSDAEEVDFAGWLCST 279
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 561 PTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN 620
P ++ + VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 621 VVGQ---QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFE 670
+ +L+ P+ + + RD + L + + KRG A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVE-----KRGSAKELLQHQFLK 274
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
F + LG G+ G V+ + A K++ + A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
++ Y F +D + ME+ GG L + ++ G+ + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+++RD+KP N+LV G I L DF +S
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMD-KASLASRKKLTRAQTEREILQLLDHP 391
F + LG G+ G V+ + A K++ + A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
++ Y F +D + ME+ GG L + ++ G+ + +
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+++RD+KP N+LV G I L DF +S
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 561 PTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN 620
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 621 VVGQ---QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFE 670
+ +L+ P+ + + RD + L + + KRG A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVE-----KRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 561 PTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN 620
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 621 VVGQ---QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFE 670
+ +L+ P+ + + RD + L + + KRG A E+ QH F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVE-----KRGSAKELIQHQFLK 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 561 PTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFN 620
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ L+
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 621 VVGQ---QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRG-ATEIKQHPFFE 670
+ +L+ P+ + + RD + L + + KRG A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVE-----KRGSAKELLQHQFLK 274
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 118/351 (33%), Gaps = 101/351 (28%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S F + LG G G V + + Y+A+K + + +KL+ +E +L L+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNH 61
Query: 391 PFLPTLYTHFETDRFSC-------------LVMEYCPGGDLHTL-RQRQPGKHFSEYAAR 436
++ Y + R + MEYC L+ L + EY
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 437 FXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLD 496
F H G+++RDLKP N+ +
Sbjct: 122 FRQILEALSYI--HSQGIIHRDLKPMNIFI------------------------------ 149
Query: 497 SDPSRRGPGGSFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPE 556
D SR G F + K + L L S LP
Sbjct: 150 -DESRNVKIGDFGLA--------------------------KNVHRSLDILKLDSQNLPG 182
Query: 557 LVAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNR 615
T+A +GT Y+A E++ G GH +D ++ GI E++Y PF R
Sbjct: 183 SSDNLTSA-----IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER 234
Query: 616 ATLFNVVGQQLR---------FPDSPATSYASRDLIRGLLVKEPQHRLGVK 657
+ ++LR F D+ + +IR L+ +P R G +
Sbjct: 235 VNIL----KKLRSVSIEFPPDFDDNKMK--VEKKIIRLLIDHDPNKRPGAR 279
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
FVGT +YLAPE+++ + + VD+W+FG E + G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 9/142 (6%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ + +RLG G G V T A+K + S K R E +I++ L+HP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPN 74
Query: 393 L------PTLYTHFETDRFSCLVMEYCPGGDLHT-LRQRQPGKHFSEYAARFXXXXXXXX 445
+ P + L MEYC GGDL L Q + E R
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 446 XXXXHMLGVVYRDLKPENVLVR 467
H +++RDLKPEN++++
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQ 156
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
FVGT +YLAPE+++ + + VD+W+FG E + G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 9/142 (6%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ + +RLG G G V T A+K + S K R E +I++ L+HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPN 73
Query: 393 L------PTLYTHFETDRFSCLVMEYCPGGDLHT-LRQRQPGKHFSEYAARFXXXXXXXX 445
+ P + L MEYC GGDL L Q + E R
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 446 XXXXHMLGVVYRDLKPENVLVR 467
H +++RDLKPEN++++
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQ 155
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 568 SFVGTHEYLAPEII-KG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGN-RATLFNV 621
+F GT +Y+APEII KG G+G A D W+ G + E+ GK PF G +A +F V
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 238
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 5/148 (3%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G VY S + A+K + + + L E + + L H +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL---HEEIALHKHLKHKNIVQYLG 86
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGK-HFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
F + F + ME PGG L L + + G +E F H +V+R
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 458 DLKPENVLVRD-DGHIMLSDFDLSLRCA 484
D+K +NVL+ G + +SDF S R A
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLA 174
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 326 GILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI- 384
G + S + + +G G G+VY + + + A+K + + T RE+
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 385 ----LQLLDHPFLPTLYTHFETDRFS-----CLVMEYCPGGDLHTLRQRQPGKHFSEYAA 435
L+ +HP + L T R LV E+ DL T + P
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 436 RFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL----SLRCAVSPTLI 490
+ H +V+RDLKPEN+LV G + L+DF L S + A++P ++
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + ++
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 361
Query: 625 QL--RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
L R + S + + + LLV++P R A E+ +HPF
Sbjct: 362 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFL 404
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
++G G G V ++ + S+ A+K MD R+ L E I++ H + +Y
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 214
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +VME+ GG L + +E H GV++R
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 458 DLKPENVLVRDDGHIMLSDF 477
D+K +++L+ DG + LSDF
Sbjct: 272 DIKSDSILLTHDGRVKLSDF 291
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 557 LVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
L P AR VGT Y++PE I G + VD ++ G+ L ELLY PF R
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV 234
Query: 617 -TLFNVVGQQLRFPDSPATSY-ASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNW 674
TL +V + L+FP Y +++ +L P R A I ++ FE +++
Sbjct: 235 RTLTDV--RNLKFPPLFTQKYPCEYVMVQDMLSPSPMER----PEAINIIENAVFEDLDF 288
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 31/171 (18%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQL-- 387
++ F ++ LG G G V+ ++ C +A+K + L +R+ L R + RE+ L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIK---RIRLPNRE-LAREKVMREVKALAK 59
Query: 388 LDHPFLPTLYTHF----ETDR--------FSCLVMEYCPGGDLH-------TLRQRQPGK 428
L+HP + + + T++ + + M+ C +L T+ +R+
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 429 HFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
+ H G+++RDLKP N+ D + + DF L
Sbjct: 120 CLHIFLQ------IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 9/207 (4%)
Query: 271 RGDSLESAKTSISRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGM 330
RG +E+ +RA +G+ + +P + + +++A L + G
Sbjct: 17 RGSHMENLYFQGARARQENGMPEKP--PGPRSPQREPQRVSHEQFRAALQLVVDPGD-PR 73
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S+ ++G G G V ++ + S+ A+K MD R+ L E I++ H
Sbjct: 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQH 130
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ +Y + +VME+ GG L + +E H
Sbjct: 131 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLH 187
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDF 477
GV++RD+K +++L+ DG + LSDF
Sbjct: 188 AQGVIHRDIKSDSILLTHDGRVKLSDF 214
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + ++
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 284
Query: 625 QL--RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
L R + S + + + LLV++P R A E+ +HPF
Sbjct: 285 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFL 327
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M + L+++G G G+V+ ++ T A+K + L + + REI L+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKE 57
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L H + L+ +D+ LV E+C DL G E F
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G + L+DF L+
Sbjct: 117 C-HSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 568 SFVGTHEYLAPEII-KG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGN-RATLFNV 621
+F GT +Y+APEII KG G+G A D W+ G + E+ GK PF G +A +F V
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 224
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 5/148 (3%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LG G G VY S + A+K + + + L E + + L H +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL---HEEIALHKHLKHKNIVQYLG 72
Query: 399 HFETDRFSCLVMEYCPGGDLHTLRQRQPGK-HFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
F + F + ME PGG L L + + G +E F H +V+R
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 458 DLKPENVLVRD-DGHIMLSDFDLSLRCA 484
D+K +NVL+ G + +SDF S R A
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLA 160
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ-LR 627
VGT ++APE+I +G+ VD W+ GI + E++ G+ P+ + + R
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPR 260
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFE 670
D S R + +LV+EP R A E+ HPF +
Sbjct: 261 VKDLHKVSSVLRGFLDLMLVREPSQR----ATAQELLGHPFLK 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 10/168 (5%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
++G G G V ++ T A+K MD R+ L E I++ H + +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF---NEVVIMRDYHHDNVVDMY 108
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ + +VME+ GG L + +E H GV++R
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 458 DLKPENVLVRDDGHIMLSDFDLSLRCA-VSPTLIKTSSLDSDPSRRGP 504
D+K +++L+ DG I LSDF CA VS + K L P P
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGF---CAQVSKEVPKRKXLVGTPYWMAP 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + ++
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 239
Query: 625 QL--RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
L R + S + + + LLV++P R A E+ +HPF
Sbjct: 240 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 282
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
++G G G V ++ + S+ A+K MD R+ L E I++ H + +Y
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 92
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +VME+ GG L + +E H GV++R
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 458 DLKPENVLVRDDGHIMLSDF 477
D+K +++L+ DG + LSDF
Sbjct: 150 DIKSDSILLTHDGRVKLSDF 169
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPD 630
Y+APE++ E + + D W+ G+ + LL G PF + A + Q FP+
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPN 288
Query: 631 SPATSYASRD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
P S S + LIR LL EP R + TE HP+
Sbjct: 289 -PEWSEVSEEVKXLIRNLLKTEPTQRXTI----TEFXNHPWI 325
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K + A R+ RA I++++D +
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVD------V 123
Query: 397 YTHFETDRFSCLVMEYC-PGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVV 455
Y + R L++ C GG+L + Q + + F+E A H + +
Sbjct: 124 YENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIA 183
Query: 456 YRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + ++
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 241
Query: 625 QL--RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
L R + S + + + LLV++P R A E+ +HPF
Sbjct: 242 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 284
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
++G G G V ++ + S+ A+K MD R+ L E I++ H + +Y
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 94
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +VME+ GG L + +E H GV++R
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 458 DLKPENVLVRDDGHIMLSDF 477
D+K +++L+ DG + LSDF
Sbjct: 152 DIKSDSILLTHDGRVKLSDF 171
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
Query: 336 LKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
L +G G G V+ T A+K M ++ K + +L+ D P++
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-VVLKSHDCPYIVQ 88
Query: 396 LYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVV 455
+ F T+ + ME G L++R G + GV+
Sbjct: 89 CFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVI 147
Query: 456 YRDLKPENVLVRDDGHIMLSDFDLSLR 482
+RD+KP N+L+ + G I L DF +S R
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGR 174
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + ++
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 230
Query: 625 QL--RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
L R + S + + + LLV++P R A E+ +HPF
Sbjct: 231 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
++G G G V ++ + S+ A+K MD R+ L E I++ H + +Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 83
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +VME+ GG L + +E H GV++R
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 458 DLKPENVLVRDDGHIMLSDF 477
D+K +++L+ DG + LSDF
Sbjct: 141 DIKSDSILLTHDGRVKLSDF 160
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 49/174 (28%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGN-------------- 614
+V T Y APE+I G G+ + VD W+ G + EL+ G F+G+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 615 --------RATLFNVVGQQLRFP-------------------DSPATSYASRDLIRGLLV 647
+ T+ N V + ++P D TS A RDL+ +LV
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQA-RDLLSKMLV 303
Query: 648 KEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPGKFGAVD 701
+P R+ V E +HP+ V + PP P+ +A+L + A++
Sbjct: 304 IDPDKRISVD----EALRHPYI-TVWYDPAEAEAPP--PQIYDAQLEEREHAIE 350
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + ++
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 234
Query: 625 QL--RFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
L R + S + + + LLV++P R A E+ +HPF
Sbjct: 235 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
++G G G V ++ + S+ A+K MD R+ L E I++ H + +Y
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 87
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +VME+ GG L + +E H GV++R
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 458 DLKPENVLVRDDGHIMLSDF 477
D+K +++L+ DG + LSDF
Sbjct: 145 DIKSDSILLTHDGRVKLSDF 164
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 329 GMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQ 386
GM +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 107
Query: 447 XXXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 219
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 280 AALA----HPFFQDVT 291
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ + +GT +YL+PE +G+ + D ++ G L+E+L G+ PF G + +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSVAYQ 230
Query: 625 QLR---FPDSPATSYASRDL---IRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIR 678
+R P S S DL + L K P++R + A E++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVRVH 280
Query: 679 CSTPPEVPR 687
PPE P+
Sbjct: 281 NGEPPEAPK 289
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL-TRAQTEREILQLLDHP 391
+ L + LG G + V+L+ A+KV+ +A LA R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 392 FLPTLYTHFETDR----FSCLVMEYCPGGDL----HTLRQRQPGKHFSEYAARFXXXXXX 443
+ +Y E + +VMEY G L HT P + A
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DAC 126
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H G+++RD+KP N+++ + + DF ++ A S
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M + L+++G G G VY ++ + FA+K K L + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKE 56
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L H + LY T + LV E+ DL L G S A F
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G + ++DF L+
Sbjct: 116 C-HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M + L+++G G G VY ++ + FA+K K L + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKE 56
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L H + LY T + LV E+ DL L G S A F
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G + ++DF L+
Sbjct: 116 C-HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M + L+++G G G VY ++ + FA+K K L + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKE 56
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L H + LY T + LV E+ DL L G S A F
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G + ++DF L+
Sbjct: 116 C-HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ + +GT +YL+PE +G+ + D ++ G L+E+L G+ PF G + + V +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHV-R 233
Query: 625 QLRFPDSPATSYASRDL---IRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCST 681
+ P S S DL + L K P++R + A E++ + +
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVRVHNGE 283
Query: 682 PPEVPR 687
PPE P+
Sbjct: 284 PPEAPK 289
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL-TRAQTEREILQLLDHP 391
+ L + LG G + V+L+ A+KV+ +A LA R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 392 FLPTLYTHFETDR----FSCLVMEYCPGGDL----HTLRQRQPGKHFSEYAARFXXXXXX 443
+ +Y E + +VMEY G L HT P + A
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DAC 126
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H G+++RD+KP N+++ + + DF ++ A S
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ + +GT +YL+PE +G+ + D ++ G L+E+L G+ PF G + +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSVAYQ 230
Query: 625 QLR---FPDSPATSYASRDL---IRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIR 678
+R P S S DL + L K P++R + A E++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVRVH 280
Query: 679 CSTPPEVPR 687
PPE P+
Sbjct: 281 NGEPPEAPK 289
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL-TRAQTEREILQLLDHP 391
+ L + LG G + V+L+ A+KV+ +A LA R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 392 FLPTLYTHFETDR----FSCLVMEYCPGGDL----HTLRQRQPGKHFSEYAARFXXXXXX 443
+ +Y E + +VMEY G L HT P + A
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DAC 126
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H G+++RD+KP N+++ + + DF ++ A S
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 339 LGCGDIGSVY--LSELSSTRCYFAMKVMDKAS-LASRKKLTRAQTEREILQLLDHPFLPT 395
LGCG+ GSV + + + A+KV+ + + A +++ R E +I+ LD+P++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR---EAQIMHQLDNPYIVR 74
Query: 396 LYTHFETDRFSCLVMEYCPGGDLHTL----RQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
L + + LVME GG LH R+ P + +E +
Sbjct: 75 LIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---- 129
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + + +SDF LS
Sbjct: 130 -NFVHRDLAARNVLLVNRHYAKISDFGLS 157
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRF-PD 630
++ APE I S D W++G+ + E L YG+ P+K G F G+++ P+
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 237
Query: 631 SPATSYA 637
P YA
Sbjct: 238 CPPELYA 244
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ + +GT +YL+PE +G+ + D ++ G L+E+L G+ PF G + +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSVAYQ 230
Query: 625 QLR---FPDSPATSYASRDL---IRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIR 678
+R P S S DL + L K P++R + A E++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVRVH 280
Query: 679 CSTPPEVPR 687
PPE P+
Sbjct: 281 NGEPPEAPK 289
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL-TRAQTEREILQLLDHP 391
+ L + LG G + V+L+ A+KV+ +A LA R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 392 FLPTLYTHFETDR----FSCLVMEYCPGGDL----HTLRQRQPGKHFSEYAARFXXXXXX 443
+ +Y E + +VMEY G L HT P + A
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DAC 126
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H G+++RD+KP N+++ + + DF ++ A S
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++ + +GT +YL+PE +G+ + D ++ G L+E+L G+ PF G + +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSVAYQ 230
Query: 625 QLR---FPDSPATSYASRDL---IRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIR 678
+R P S S DL + L K P++R + A E++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR-------ADLVRVH 280
Query: 679 CSTPPEVPR 687
PPE P+
Sbjct: 281 NGEPPEAPK 289
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL-TRAQTEREILQLLDHP 391
+ L + LG G + V+L+ A+KV+ +A LA R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 392 FLPTLYTHFETDR----FSCLVMEYCPGGDL----HTLRQRQPGKHFSEYAARFXXXXXX 443
+ +Y E + +VMEY G L HT P + A
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DAC 126
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H G+++RD+KP N+L+ + + DF ++ A S
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADS 169
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTER 382
I H + + +LG G+ GSV L +T A+K + + ++ R E
Sbjct: 6 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR---EI 62
Query: 383 EILQLLDHPFLPTLY-THFETDRFSC-LVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
+IL+ L F+ + R S LVMEY P G L QR H + A
Sbjct: 63 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR----HRARLDASRLLL 118
Query: 441 XXXXXXXXXHMLG---VVYRDLKPENVLVRDDGHIMLSDFDLS 480
LG V+RDL N+LV + H+ ++DF L+
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTER 382
I H + + +LG G+ GSV L +T A+K + + ++ R E
Sbjct: 7 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR---EI 63
Query: 383 EILQLLDHPFLPTLY-THFETDRFSC-LVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
+IL+ L F+ + R S LVMEY P G L QR H + A
Sbjct: 64 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR----HRARLDASRLLL 119
Query: 441 XXXXXXXXXHMLG---VVYRDLKPENVLVRDDGHIMLSDFDLS 480
LG V+RDL N+LV + H+ ++DF L+
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M + L+++G G G+V+ ++ T A+K + L + + REI L+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKE 57
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L H + L+ +D+ LV E+C DL G E F
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G + L++F L+
Sbjct: 117 C-HSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 557 LVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
L P A VGT Y++PE I G + VD ++ G+ L ELLY F R
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERV 280
Query: 617 TLFNVVGQQLRFPDSPATSYASRD-LIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
+ V + L+FP Y +++ +L P R AT+I ++ FE +
Sbjct: 281 RIITDV-RNLKFPLLFTQKYPQEHMMVQDMLSPSPTER----PEATDIIENAIFENL 332
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTER 382
I H + + +LG G+ GSV L +T A+K + + ++ R E
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR---EI 75
Query: 383 EILQLLDHPFLPTLY-THFETDRFSC-LVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
+IL+ L F+ + R S LVMEY P G L QR H + A
Sbjct: 76 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR----HRARLDASRLLL 131
Query: 441 XXXXXXXXXHMLG---VVYRDLKPENVLVRDDGHIMLSDFDLS 480
LG V+RDL N+LV + H+ ++DF L+
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ DL T +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 225
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 286 A----HPFFQDVT 294
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + EL+ G F+G+ + +N V +QL
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT-DHIDQWNKVIEQLGT 241
Query: 629 PDS 631
P +
Sbjct: 242 PSA 244
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 171
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGHGS-AVDWWTFGIFLHELLYGKTPFKGSGNRA 616
+A T +V T Y APEI+ H + VD W+ G + ELL G+T F G+ +
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDH-- 257
Query: 617 TLFNVVGQQLRFPDSPATSYASR 639
N + Q +R +P S SR
Sbjct: 258 --INQLQQIMRLTGTPPASVISR 278
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 171 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 68/181 (37%), Gaps = 20/181 (11%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL-ASRKKLTRAQTERE------ 383
S + K +G GD G V CY ++V + + + K L TER+
Sbjct: 49 SRIHIEKIIGSGDSGEV---------CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 384 ---ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
I+ DHP + L R + +V EY G L T + G+ F+
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLR 158
Query: 441 XXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPS 500
LG V+RDL NVLV + +SDF LS P T++ P
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPI 218
Query: 501 R 501
R
Sbjct: 219 R 219
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNV 621
+ APE I SA D W+FG+ + E+L YG+ P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 110
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 224
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 285 A----HPFFQDVT 293
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 109
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 223
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 284 A----HPFFQDVT 292
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ DL +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 225
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 286 A----HPFFQDVT 294
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
T+ + FV T Y APE+I G G+ VD W+ G + E++ G F G+ + +N
Sbjct: 180 TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNK 238
Query: 622 VGQQLRFP 629
V +QL P
Sbjct: 239 VIEQLGTP 246
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLI 490
H G+++RDLKP N++V+ D + + DF L+ S ++
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMV 185
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 68/181 (37%), Gaps = 20/181 (11%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASL-ASRKKLTRAQTERE------ 383
S + K +G GD G V CY ++V + + + K L TER+
Sbjct: 49 SRIHIEKIIGSGDSGEV---------CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 384 ---ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
I+ DHP + L R + +V EY G L T + G+ F+
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLR 158
Query: 441 XXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPS 500
LG V+RDL NVLV + +SDF LS P T++ P
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218
Query: 501 R 501
R
Sbjct: 219 R 219
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNV 621
+ APE I SA D W+FG+ + E+L YG+ P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 571 GTHEYLAPEIIKGEG--HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV-GQQLR 627
GT+E++ PE E +G+ VD W+ GI L+ + Y PF + LFN + + +
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 628 FP 629
+P
Sbjct: 272 YP 273
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDF 477
+ +RD+KP N+L+ +G + LSDF
Sbjct: 172 NICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 374 KLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVME-YCPGGDLHTLRQRQPGKHFSE 432
KL + E IL ++H + + FE F LVME + G DL R P E
Sbjct: 72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDE 129
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
A + + +++RD+K EN+++ +D I L DF
Sbjct: 130 PLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 568 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPF 609
+F GT EY APE++ G + G ++ W+ G+ L+ L++ + PF
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G+ + E++ G F G+ + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 629 PDSPATSYASRDLIRGLLVKEPQH 652
P SP + +R + P++
Sbjct: 244 P-SPEFMKKLQPTVRTYVENRPKY 266
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKDFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 222
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 283 A----HPFFQDVT 291
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G+ + E++ G F G+ + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 629 PDSPATSYASRDLIRGLLVKEPQH 652
P SP + +R + P++
Sbjct: 244 P-SPEFMKKLQPTVRTYVENRPKY 266
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ DL +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 223
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 284 A----HPFFQDVT 292
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ DL T +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 218
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 279 AALA----HPFFQDVT 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI-- 384
++ M +F+ ++++G G G VY + T A+K K L + + + REI
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 59
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
L+ L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 109
Query: 445 XXXXXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 223
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 224 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 283
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 284 AALA----HPFFQDVT 295
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 120/351 (34%), Gaps = 101/351 (28%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S F + LG G G V + + Y+A+K + + +KL+ +E +L L+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLNH 61
Query: 391 PFLPTLYTHF-ETDRF----------SCLVM--EYCPGGDLHTLRQRQP-GKHFSEYAAR 436
++ Y + E F S L + EYC L+ L + + EY
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 437 FXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLD 496
F H G+++R+LKP N+ +
Sbjct: 122 FRQILEALSYI--HSQGIIHRNLKPXNIFI------------------------------ 149
Query: 497 SDPSRRGPGGSFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPE 556
D SR G F + K + L L S LP
Sbjct: 150 -DESRNVKIGDFGLA--------------------------KNVHRSLDILKLDSQNLPG 182
Query: 557 LVAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNR 615
T+A +GT Y+A E++ G GH +D ++ GI E +Y PF R
Sbjct: 183 SSDNLTSA-----IGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXER 234
Query: 616 ATLFNVVGQQLR---------FPDSPATSYASRDLIRGLLVKEPQHRLGVK 657
+ ++LR F D+ + +IR L+ +P R G +
Sbjct: 235 VNIL----KKLRSVSIEFPPDFDDNKXK--VEKKIIRLLIDHDPNKRPGAR 279
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 339 LGCGDIGSVY--LSELSSTRCYFAMKVMDKAS-LASRKKLTRAQTEREILQLLDHPFLPT 395
LGCG+ GSV + + + A+KV+ + + A +++ R E +I+ LD+P++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR---EAQIMHQLDNPYIVR 400
Query: 396 LYTHFETDRFSCLVMEYCPGGDLHTL----RQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
L + + LVME GG LH R+ P + +E +
Sbjct: 401 LIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---- 455
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+R+L NVL+ + + +SDF LS
Sbjct: 456 -NFVHRNLAARNVLLVNRHYAKISDFGLS 483
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRF-PD 630
++ APE I S D W++G+ + E L YG+ P+K G F G+++ P+
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 563
Query: 631 SPATSYA 637
P YA
Sbjct: 564 CPPELYA 570
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 281
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 341
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 342 IDPAKRISVDDAL----QHPYI 359
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 571 GTHEYLAPEIIKG--EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ-QLR 627
G+ + PEI G G VD W+ G+ L+ + G PF+G N LF +G+
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGKGSYA 231
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPR 687
P + DL++G+L EP R ++ +I+QH +F + P E P
Sbjct: 232 IPGDCGPPLS--DLLKGMLEYEPAKRFSIR----QIRQHSWFR-------KKHPPAEAPV 278
Query: 688 PM 689
P+
Sbjct: 279 PI 280
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 366 KASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQ 425
+A++ +L R + ++QL+D LY + + +VMEYC G + +
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVD-----VLYNEEKQKMY--MVMEYCVCG-MQEMLDSV 101
Query: 426 PGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLS 475
P K F A H G+V++D+KP N+L+ G + +S
Sbjct: 102 PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 111
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 225
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 286 A----HPFFQDVT 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 326 GILG-MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
G LG M +F+ ++++G G G VY + T A+K K L + + + REI
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREI 57
Query: 385 --LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
L+ L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 107
Query: 443 XXXXXXXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 226
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 286
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 287 A----HPFFQDVT 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 65
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 115
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 226
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 286
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 287 AALA----HPFFQDVT 298
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 65
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 115
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 226
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 286
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 287 AALA----HPFFQDVT 298
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 16/163 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTER 382
I H + + +LG G+ GSV L +T A+K + + ++ R E
Sbjct: 3 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR---EI 59
Query: 383 EILQLLDHPFLPTLY-THFETDRFSC-LVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
+IL+ L F+ + R LVMEY P G L QR H + A
Sbjct: 60 QILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR----HRARLDASRLLL 115
Query: 441 XXXXXXXXXHMLG---VVYRDLKPENVLVRDDGHIMLSDFDLS 480
LG V+RDL N+LV + H+ ++DF L+
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 111
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 225
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 286 A----HPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 110
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 224
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 285 A----HPFFQDVT 293
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 110
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 224
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 285 A----HPFFQDVT 293
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
+++++ + Y APE+I G H +AVD W+ G E++ G+ F+G + L +V
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 17/160 (10%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLD 389
M F++ + G G G+V L + ST M V K + + R + L +L
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKST----GMSVAIKKVIQDPRFRNRELQIMQDLAVLH 77
Query: 390 HPFLPTLYTHFET-------DRFSCLVMEYCPGGDLHTLRQRQPGKHFSE--YAARFXXX 440
HP + L ++F T D + +VMEY P LH + + + +
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 441 XXXXXXXXXHM--LGVVYRDLKPENVLVRD-DGHIMLSDF 477
H+ + V +RD+KP NVLV + DG + L DF
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 109
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 223
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 284 A----HPFFQDVT 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 222
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 283 A----HPFFQDVT 291
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 109
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 220
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 280
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 281 AALA----HPFFQDVT 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 107
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 221
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 282 A----HPFFQDVT 290
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 629 PDSPATSYASRDLIRGLLVKEPQH 652
P SP + +R + P++
Sbjct: 244 P-SPEFMKKLQPTVRTYVENRPKY 266
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 244
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 245 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 304
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 305 IDPAKRISVDDAL----QHPYI 322
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 243
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 304 IDPAKRISVDDAL----QHPYI 321
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 219
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 280 AALA----HPFFQDVT 291
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 219
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 280 AALA----HPFFQDVT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 219
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 280 AALA----HPFFQDVT 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 222
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 283 A----HPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 107
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 218
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 279 AALA----HPFFQDVT 290
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
V T Y APEI+ G + + +AVD W+ G E++ + F G LF +
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 222
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 283 A----HPFFQDVT 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 109
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 223
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 284 A----HPFFQDVT 292
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 28/173 (16%)
Query: 325 DGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
D GM F+ ++ +G G G V+ ++ ++ K + R K + ERE+
Sbjct: 6 DKRFGMD-FKEIELIGSGGFGQVFKAK---------HRIDGKTYVIKRVKYNNEKAEREV 55
Query: 385 LQL--LDHPFLPTL---YTHFETD-----------RFSCLV--MEYCPGGDLHTLRQRQP 426
L LDH + + F+ D + CL ME+C G L +++
Sbjct: 56 KALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 115
Query: 427 GKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
G+ + A H ++ RDLKP N+ + D + + DF L
Sbjct: 116 GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFP 629
GT Y++PE I + +G VD + G+ L ELL+ T F+ S L + + + F
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI-FD 241
Query: 630 DSPATSYASRDLIRGLLVKEPQHR 653
T L++ LL K+P+ R
Sbjct: 242 KKEKT------LLQKLLSKKPEDR 259
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
T S S GT E++APE+++ E D ++FG+ L EL + P+ G+ N A +
Sbjct: 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAA 250
Query: 622 VG---QQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
VG ++L P + A+ +I G EP R
Sbjct: 251 VGFKCKRLEIPRNLNPQVAA--IIEGCWTNEPWKR 283
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQ 386
I+ H+ +++LG G V L E ++A+K + R++ AQ E ++ +
Sbjct: 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE---AQREADMHR 81
Query: 387 LLDHPFLPTLYTHFETDRFS----CLVMEYCPGGDL--HTLRQRQPGKHFSEYAARFXXX 440
L +HP + L + +R + L++ + G L R + G +E +
Sbjct: 82 LFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLL 141
Query: 441 XXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
H G +RDLKP N+L+ D+G +L D
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 243
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 304 IDPAKRISVDDAL----QHPYI 321
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 34/143 (23%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
+A A +V T Y APE+I H VD W+ G + E+L GKT FKG
Sbjct: 172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 617 TLFNVV------GQQL--RFPDSPATSY---------------------ASRDLIRGLLV 647
L ++ G + + D A SY + DL+ +L
Sbjct: 232 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291
Query: 648 KEPQHRLGVKRGATEIKQHPFFE 670
+ RL + T HPFFE
Sbjct: 292 LDVDKRLTAAQALT----HPFFE 310
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 418 LHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
+ T Q+ G FSE ++ H GVV+RDLKP N+ V +D + + DF
Sbjct: 111 MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF 170
Query: 478 DLS 480
L+
Sbjct: 171 GLA 173
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 107
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 221
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 282 A----HPFFQDVT 290
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 33/174 (18%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQ- 386
L + + +LL+ +G G G+VY L A+KV S A+R+ E+ I +
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPV--AVKVF---SFANRQNFI---NEKNIYRV 61
Query: 387 -LLDHPFLPTLYTHFETDRFSC-------LVMEYCPGGDLHTLRQRQPGKHFSEYAA--R 436
L++H + E R + LVMEY P G L + H S++ + R
Sbjct: 62 PLMEHDNIARFIVGDE--RVTADGRMEYLLVMEYYPNGSL----XKYLSLHTSDWVSSCR 115
Query: 437 FXXXXXXXXXXXXHML--------GVVYRDLKPENVLVRDDGHIMLSDFDLSLR 482
L + +RDL NVLV++DG ++SDF LS+R
Sbjct: 116 LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 629 PDSPATSYASRDLIRGLLVKEPQH 652
P SP + +R + P++
Sbjct: 244 P-SPEFMKKLQPTVRTYVENRPKY 266
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ DL +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 225
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 286 A----HPFFQDVT 294
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 242
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 243 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 302
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 303 IDPAKRISVDDAL----QHPYI 320
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 142 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 244
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 245 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 304
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 305 IDPAKRISVDDAL----QHPYI 322
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 281
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 341
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 342 IDPAKRISVDDAL----QHPYI 359
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQ-TEREILQLL 388
+ + L+K+LG G G V+ S T A+K + A S T AQ T REI+ L
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS----TDAQRTFREIMILT 63
Query: 389 D---HPFLPTLYTHF--ETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
+ H + L + DR LV +Y DLH + + ++
Sbjct: 64 ELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIR---ANILEPVHKQYVVYQLI 119
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RD+KP N+L+ + H+ ++DF LS
Sbjct: 120 KVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI+ G + +D W+ G L E+L GK F GS L ++G
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 629 PDSPATSYASRDLIRGLLVKEPQH 652
P SP + +R + P++
Sbjct: 244 P-SPEFMKKLQPTVRTYVENRPKY 266
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 54/143 (37%), Gaps = 34/143 (23%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
+A A +V T Y APE+I H VD W+ G + E+L GKT FKG
Sbjct: 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 617 TLFNVV------GQQL--RFPDSPATSY---------------------ASRDLIRGLLV 647
L ++ G + + D A SY + DL+ +L
Sbjct: 250 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309
Query: 648 KEPQHRLGVKRGATEIKQHPFFE 670
+ RL + T HPFFE
Sbjct: 310 LDVDKRLTAAQALT----HPFFE 328
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 418 LHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
+ T Q+ G FSE ++ H GVV+RDLKP N+ V +D + + DF
Sbjct: 129 MQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDF 188
Query: 478 DLS 480
L+
Sbjct: 189 GLA 191
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 61
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ DL +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 225
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 286 A----HPFFQDVT 294
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 237
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 238 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 297
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 298 IDPAKRISVDDAL----QHPYI 315
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 629 P 629
P
Sbjct: 244 P 244
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 18/177 (10%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--- 384
+ S + + +G G G+VY + + + A+K + + ++ T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 385 --LQLLDHPFLPTLYTHFETDRFS-----CLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
L+ +HP + L T R LV E+ DL T + P +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 438 XXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL----SLRCAVSPTLI 490
H +V+RDLKPEN+LV G + L+DF L S + A++P ++
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 545 SELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL- 603
S+ GL S L + ++PT ++ + APE I+ SA D W++GI + E++
Sbjct: 177 SDFGL-SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
Query: 604 YGKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
YG+ P+ N+ + N + Q R P A L+ K+ HR
Sbjct: 236 YGERPYWDMTNQDVI-NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 284
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + +N V +QL
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 244
Query: 629 P 629
P
Sbjct: 245 P 245
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 243
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 304 IDPAKRISVDDAL----QHPYI 321
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+K K L + + + REI L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 60
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ DL +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 34/133 (25%)
Query: 570 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
V T Y APEI+ G + + +AVD W+ G E++ + F G LF + + L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RTLGT 224
Query: 629 PDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVKRGA 660
PD P R L+ +L +P R+ K
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 661 TEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 285 A----HPFFQDVT 293
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 237
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 238 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 297
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 298 IDPAKRISVDDAL----QHPYI 315
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 629 PDSPATSYASRDLIRGLLVKEPQH 652
P SP + +R + P++
Sbjct: 244 P-SPEFMKKLQPTVRTYVENRPKY 266
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 236
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 297 IDPAKRISVDDAL----QHPYI 314
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 545 SELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL- 603
S+ GL S L + ++PT ++ + APE I+ SA D W++GI + E++
Sbjct: 151 SDFGL-SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
Query: 604 YGKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKEPQHR 653
YG+ P+ N+ + N + Q R P A L+ K+ HR
Sbjct: 210 YGERPYWDMTNQDVI-NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 258
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 243
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 304 IDPAKRISVDDAL----QHPYI 321
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 243
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 304 IDPAKRISVDDAL----QHPYI 321
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 243
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 244 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 303
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 304 IDPAKRISVDDAL----QHPYI 321
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + +N V +QL
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 629 PDSPATSYASRDLIRGLLVKEPQH 652
P SP + +R + P++
Sbjct: 244 P-SPEFMKKLQPTVRTYVENRPKY 266
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 562 TAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNV 621
+ ++ + +GT +YL+PE +G+ + D ++ G L+E+L G+ PF G + +V
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD----SPVSV 244
Query: 622 VGQQLR---FPDSPATSYASRDL---IRGLLVKEPQHR 653
Q +R P S S DL + L K P++R
Sbjct: 245 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL-TRAQTEREILQLLDHP 391
+ L + LG G + V+L+ A+KV+ +A LA R + E + L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 89
Query: 392 FLPTLYTHFETDR----FSCLVMEYCPGGDL----HTLRQRQPGKHFSEYAARFXXXXXX 443
+ +Y E + +VMEY G L HT P + A
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA------DAC 143
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVS 486
H G+++RD+KP N+++ + + DF ++ A S
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 37/145 (25%)
Query: 559 AEPTAARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNR 615
+EPT +S + FV T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 616 ATL---FNVVG-----QQLR----------------FPDSPATSYASR------DLIRGL 645
L F ++G LR +P +P R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 646 LVKEPQHRLGVKRGATEIKQHPFFE 670
LV +P R+ K E +HP+ +
Sbjct: 290 LVFDPAKRITAK----EALEHPYLQ 310
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 15/157 (9%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVM---DKASLASRKKLTRAQTEREILQL 387
S F+L LG G G V + T A+K + DK A R E +IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 388 LDHPFLPTLYTHFETDRFS----CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
H + T++ D F +++ DLH + Q S+ ++
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP N+L+ + + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL-- 626
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR-DYIDQWNKVIEQLGT 236
Query: 627 ------------------------------RFPDS--PATSY-------ASRDLIRGLLV 647
FPDS PA S +RDL+ +LV
Sbjct: 237 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296
Query: 648 KEPQHRLGVKRGATEIKQHPFF 669
+P R+ V QHP+
Sbjct: 297 IDPAKRISVDDAL----QHPYI 314
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A TA +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCA 484
H +++RDLKP N+ V +D + + DF L+ A
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A TA +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCA 484
H +++RDLKP N+ V +D + + DF L+ A
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A TA +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCA 484
H +++RDLKP N+ V +D + + DF L+ A
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--- 384
+ S + + +G G G+VY + + + A+K + + ++ T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 385 --LQLLDHPFLPTLYTHFETDRFS-----CLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
L+ +HP + L T R LV E+ DL T + P +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 438 XXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL----SLRCAVSPTLI 490
H +V+RDLKPEN+LV G + L+DF L S + A+ P ++
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 16/160 (10%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ +L +G G G S K +D S+ +K +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 393 LPTLYTHF--ETDRFSCLVMEYCPGGDLHTL-----RQRQPGKHFSEYAARFXXXXXXXX 445
+ Y T+ +VMEYC GGDL ++ ++RQ + E
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTLA 123
Query: 446 XXXXHMLG-----VVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP NV + ++ L DF L+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
+FVGT Y++PE + + D W+ G L+EL PF
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 16/160 (10%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ +L +G G G S K +D S+ +K +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 393 LPTLYTHF--ETDRFSCLVMEYCPGGDLHTL-----RQRQPGKHFSEYAARFXXXXXXXX 445
+ Y T+ +VMEYC GGDL ++ ++RQ + E
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTLA 123
Query: 446 XXXXHMLG-----VVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP NV + ++ L DF L+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
+FVGT Y++PE + + D W+ G L+EL PF
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL-- 388
+ +RL LG G G+V+ + R A+KV+ + + L+ + T + LL
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 389 -----DHPFLPTLYTHFETDRFSCLVMEY-CPGGDLH-TLRQRQPGKHFSEYAARFXXXX 441
HP + L FET LV+E P DL + ++ P E +R
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQ 147
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLV 466
H GVV+RD+K EN+L+
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILI 172
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 569 FVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I + + H W+ GI L++++ G PF+ ++ +L
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELH 251
Query: 628 FPDSPATSYASRD---LIRGLLVKEPQHR 653
FP ++ S D LIR L +P R
Sbjct: 252 FP-----AHVSPDCCALIRRCLAPKPSSR 275
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 16/160 (10%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+ +L +G G G S K +D S+ +K +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLRELKHPN 66
Query: 393 LPTLYTHF--ETDRFSCLVMEYCPGGDLHTL-----RQRQPGKHFSEYAARFXXXXXXXX 445
+ Y T+ +VMEYC GGDL ++ ++RQ + E
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTLA 123
Query: 446 XXXXHMLG-----VVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP NV + ++ L DF L+
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF 609
FVGT Y++PE + + D W+ G L+EL PF
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++G Q+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 255 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 153
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++G Q+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 256 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 154
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++G Q+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 256 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 154
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLT--RAQTEREILQLLDHPFLPTL 396
LG G G V T+ FA+K++ A R+ RA I++++D +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD------V 79
Query: 397 YTHFETDRFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGV 454
Y + R CL VME GG+L + Q + + F+E A H + +
Sbjct: 80 YENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 455 VYRDLKPENVLV---RDDGHIMLSDFDLS 480
+RD+KPEN+L R + + L+DF +
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 583 GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRAT----LFNVVGQQLRFPDSPATSYAS 638
GE + + D W+ G+ ++ LL G PF + A + Q FP+ P S S
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 230
Query: 639 RD---LIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
+ LIR LL EP R+ + TE HP+
Sbjct: 231 EEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 260
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG---QQLR 627
GT E++APE+++ E D ++FG+ L EL + P+ G+ N A + VG ++L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFKCKRLE 259
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHR 653
P + A+ +I G EP R
Sbjct: 260 IPRNLNPQVAA--IIEGCWTNEPWKR 283
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 545 SELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL- 603
S+ GL S L E ++PT S+ + APE I SA D W++GI + E++
Sbjct: 160 SDFGL-SRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
Query: 604 YGKTPFKGSGNRATLFNVVGQQLRFPDSP 632
+G+ P+ N+ + N + Q R P P
Sbjct: 219 FGERPYWDMSNQDVI-NAIEQDYRLPPPP 246
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ + +R E +I++ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 396 LYTHFET------DRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 237
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
+R+ IR + P + + +IK HP+ + + R TPPE
Sbjct: 238 --------VLGTPTREQIREM---NPNY---TEFAFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++G Q+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 256 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 154
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
+FR+ K++GCG+ G + L + T Y A+K+ S A + L R QL
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEY----RFYKQLGSGD 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
+P +Y +++ +V+E DL L R FS
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRMEYV 121
Query: 450 HMLGVVYRDLKPENVLVRDDGH-----IMLSDFDLS 480
H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++G Q+
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 256 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 154
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 545 SELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL- 603
S+ GL S L E ++PT S+ + APE I SA D W++GI + E++
Sbjct: 158 SDFGL-SRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
Query: 604 YGKTPFKGSGNRATLFNVVGQQLRFPDSP 632
+G+ P+ N+ + N + Q R P P
Sbjct: 217 FGERPYWDMSNQDVI-NAIEQDYRLPPPP 244
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++G Q+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 255 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 153
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++G Q+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 255 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 153
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL-TRAQTEREILQLL 388
M + L +LG G +VY + T A+K + L + A E +L+ L
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALK---EIRLEHEEGAPCTAIREVSLLKDL 57
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQP--GKHFSEYAARFXXXXXXXXX 446
H + TL+ T++ LV EY L+Q G + + +
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDKD----LKQYLDDCGNIINMHNVKLFLFQLLRGL 113
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPT 488
H V++RDLKP+N+L+ + G + L+DF L+ R PT
Sbjct: 114 AYCHRQKVLHRDLKPQNLLINERGELKLADFGLA-RAKSIPT 154
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 34/155 (21%)
Query: 544 RSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHEL 602
R EL L L + PT V T Y P+I+ G + + +D W G +E+
Sbjct: 136 RGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 194
Query: 603 LYGKTPFKGSGNRATL---FNVVG----------------QQLRFPDSPATSYASR---- 639
G+ F GS L F ++G + +P A + S
Sbjct: 195 ATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRL 254
Query: 640 -----DLIRGLLVKEPQHRLGVKRGATEIKQHPFF 669
DL+ LL E ++R+ A + +HPFF
Sbjct: 255 DSDGADLLTKLLQFEGRNRI----SAEDAMKHPFF 285
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
V T Y APE+I G G+ VD W+ G + E++ G F G+ + +N V +QL P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGTP 244
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 18/177 (10%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--- 384
+ S + + +G G G+VY + + + A+K + + ++ T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 385 --LQLLDHPFLPTLYTHFETDRFS-----CLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
L+ +HP + L T R LV E+ DL T + P +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 438 XXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL----SLRCAVSPTLI 490
H +V+RDLKPEN+LV G + L+DF L S + A+ P ++
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 31/183 (16%)
Query: 311 NDPRWKAILAIRARDGILGMSH---FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKA 367
+DP ++ + A DG G + K +G G G V+ ++L + KV+
Sbjct: 19 DDP--NKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK 76
Query: 368 SLASRKKLTRAQTEREILQLLDHPFLPTLYTHF------ETDRFSCLVMEYCP------G 415
+R E +I++++ HP + L F + + F LV+EY P
Sbjct: 77 RFKNR--------ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRAS 128
Query: 416 GDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVR-DDGHIML 474
L+Q P Y + H +G+ +RD+KP+N+L+ G + L
Sbjct: 129 RHYAKLKQTMPMLLIKLYMYQLLRSLAYI-----HSIGICHRDIKPQNLLLDPPSGVLKL 183
Query: 475 SDF 477
DF
Sbjct: 184 IDF 186
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 32/149 (21%)
Query: 566 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG- 623
++S + + Y APE+I G + + +D W+ G + EL+ G+ F G L ++
Sbjct: 198 NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV 257
Query: 624 ----------------QQLRFPD----------SPATSYASRDLIRGLLVKEPQHRLGVK 657
+ +FP P T + DLI LL P RL
Sbjct: 258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL--- 314
Query: 658 RGATEIKQHPFFEGVNWALIRCSTPPEVP 686
A E HPFF+ + R E+P
Sbjct: 315 -TAIEALCHPFFDELRTGEARMPNGRELP 342
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 628 FPD 630
PD
Sbjct: 255 SPD 257
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 41 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 95
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFX-------XXXXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 147
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 148 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 628 FPD 630
PD
Sbjct: 248 SPD 250
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 34 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 88
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFX-------XXXXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 140
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 141 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 628 FPD 630
PD
Sbjct: 256 SPD 258
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFX-------XXXXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 628 FPD 630
PD
Sbjct: 232 SPD 234
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 18 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 72
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX------- 449
+ + T +V ++C G L+ H +F
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHASETKFEMKKLIDIARQTARGMDYL 124
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 125 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 628 FPD 630
PD
Sbjct: 256 SPD 258
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFX-------XXXXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 628 FPD 630
PD
Sbjct: 230 SPD 232
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 16 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 70
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX-------XXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 122
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T FV T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T FV T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 628 FPD 630
PD
Sbjct: 233 SPD 235
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX-------XXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 125
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
+FR+ K++GCG+ G + L + T Y A+K+ S A + L R QL
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEY----RFYKQLGSGD 86
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
+P +Y +++ +V+E DL L R FS
Sbjct: 87 GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRMEYV 142
Query: 450 HMLGVVYRDLKPENVLVRDDGH-----IMLSDFDLS 480
H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 143 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 628 FPD 630
PD
Sbjct: 228 SPD 230
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX-------XXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR-DYIDQWNKVIEQLGT 248
Query: 629 P 629
P
Sbjct: 249 P 249
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+ K L + + + REI L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALX---KIRLDTETEGVPSTAIREISLLKE 58
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 219
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 280 AALA----HPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQL 387
M +F+ ++++G G G VY + T A+ K L + + + REI L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALX---KIRLDTETEGVPSTAIREISLLKE 57
Query: 388 LDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
L+HP + L T+ LV E+ LH Q K F + +A
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 107
Query: 448 XXHMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 218
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 279 AALA----HPFFQDVT 290
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 628 FPD 630
PD
Sbjct: 233 SPD 235
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX-------XXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 125
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
+FR+ K++GCG+ G + L + T Y A+K+ S A + L R QL
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEY----RFYKQLGSGD 65
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
+P +Y +++ +V+E DL L R FS
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRMEYV 121
Query: 450 HMLGVVYRDLKPENVLVRDDGH-----IMLSDFDLS 480
H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 628 FPD 630
PD
Sbjct: 228 SPD 230
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX-------XXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 628 FPD 630
PD
Sbjct: 228 SPD 230
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX-------XXXXXXXXX 449
+ + T +V ++C G L+ H +F
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 628 FPD 630
PD
Sbjct: 244 SPD 246
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX------- 449
+ + T +V ++C G L+ H +F
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLY--------HHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 628 FPD 630
PD
Sbjct: 244 SPD 246
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 20/151 (13%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
+R+G G G+VY + A+K+++ + + ++L + E +L+ H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 397 YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX------- 449
+ + T +V ++C G L+ H +F
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLY--------HHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLK N+ + +D + + DF L+
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T FV T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 409 VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRD 468
++ + G DL+ + + Q ++ +F H +++RDLKP N+ V +
Sbjct: 100 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 469 DGHIMLSDFDLS 480
D + + DF L+
Sbjct: 157 DCELKILDFGLA 168
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQLLD 389
+F+ ++++G G G VY + T A+K K L + + + REI L+ L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
HP + L T+ LV E+ LH Q K F + +A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 109
Query: 450 HMLG---------VVYRDLKPENVLVRDDGHIMLSDFDLS 480
+L V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 39/136 (28%)
Query: 572 THE-----YLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 625
THE Y APEI+ G + + +AVD W+ G E++ + F G LF + +
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF-RT 218
Query: 626 LRFPDS----------------------------PATSYASRDLIRGLLVKEPQHRLGVK 657
L PD P R L+ +L +P R+ K
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 278
Query: 658 RGATEIKQHPFFEGVN 673
HPFF+ V
Sbjct: 279 AALA----HPFFQDVT 290
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 115
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++ +
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII-K 275
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
L P +R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 276 VLGTP--------TREQIREMNPNYTEFKF------PQIKAHPWTK-----VFRPRTPPE 316
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 336 LKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDHPFL 393
L+ +G G GSV + + R A+K + + SL ++ R E +L+ L H +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 89
Query: 394 PTLYTHF----ETDRFS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
L F + FS ++ G DL+ + + Q S+ +F
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA---LSDEHVQFLVYQLLRGLKY 146
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP NV V +D + + DF L+
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 569 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGS 612
+V T Y APEI+ H VD W+ G + ELL GK F GS
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 105
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++ +
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII-K 265
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
L P +R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 266 VLGTP--------TREQIREMNPNYTEFKF------PQIKAHPWTK-----VFRPRTPPE 306
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 113
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++ +
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII-K 273
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
L P +R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 274 VLGTP--------TREQIREMNPNYTEFKF------PQIKAHPWTK-----VFRPRTPPE 314
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 111
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 271
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
+R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 272 --------VLGTPTREQIREMNPNYTEFKF------PQIKAHPWTK-----VFRPRTPPE 312
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRF 628
+V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR-DYIDQWNKVIEQLGT 237
Query: 629 P 629
P
Sbjct: 238 P 238
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 111
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++ +
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII-K 271
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
L P +R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 272 VLGTP--------TREQIREMNPNYTEFKF------PQIKAHPWTK-----VFRPRTPPE 312
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 323
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 324 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLA 410
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 650 PQHR 653
P+ R
Sbjct: 505 PEER 508
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 156
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++ +
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII-K 316
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
L P +R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 317 VLGTP--------TREQIREMNPNYTEFKF------PQIKAHPWTK-----VFRPRTPPE 357
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++G Q+
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 222
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 223 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 121
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR-DYIDQWNKVIEQLGTP 244
Query: 630 DSPATSYASRDLIRGLLVKEPQH 652
PA + +R + P++
Sbjct: 245 -CPAFMKKLQPTVRNYVENRPKY 266
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 82
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++ +
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII-K 242
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
L P +R+ IR + + + +IK HP+ + + R TPPE
Sbjct: 243 VLGTP--------TREQIREMNPNYTEFKF------PQIKAHPWTK-----VFRPRTPPE 283
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ + +R E +I++ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 396 LYTHFET------DRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 566 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK- 237
Query: 625 QLRFPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPE 684
+R+ IR + P + + +IK HP+ + + R TPPE
Sbjct: 238 --------VLGTPTREQIREM---NPNY---TEFAFPQIKAHPWTK-----VFRPRTPPE 278
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 96
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 255
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 89
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ + +R E +I++ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 396 LYTHFET------DRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 89
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 85
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 244
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 37/145 (25%)
Query: 559 AEPTAARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNR 615
+EPT +S +V T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 616 ATL---FNVVG-----QQLR----------------FPDSPATSYASR------DLIRGL 645
L F ++G LR +P +P R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 646 LVKEPQHRLGVKRGATEIKQHPFFE 670
LV +P R+ K E +HP+ +
Sbjct: 290 LVFDPAKRITAK----EALEHPYLQ 310
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 15/157 (9%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVM---DKASLASRKKLTRAQTEREILQL 387
S F+L LG G G V + T A+K + DK A R E +IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 388 LDHPFLPTLYTHFETDRFS----CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
H + T++ D F +++ DLH + Q S+ ++
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP N+L+ + + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 382 REILQLLDHPFLPTLYTHFE-TDR----FSCLVMEYCPGGDLHTLRQRQPGKHFSEYAAR 436
R+ L + HP + ++ E TDR +VMEY G L +R G+ A
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL----KRSKGQKLPVAEAI 185
Query: 437 FXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDD 469
H +G+VY DLKPEN+++ ++
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Query: 301 TGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFA 360
+G N +G+D I+ + G+L + F +++++G G G V L + + Y+A
Sbjct: 9 SGRENLYFQGDDE----IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYA 64
Query: 361 MKVMDKASLASRKKLTR-AQTEREILQLLDHPFLPT-----LYTHFETDRFSCLVMEYCP 414
+KV+ KK TR A+ E +IL+ + + + + F CL+ E P
Sbjct: 65 VKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE--P 117
Query: 415 GG-DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRD 468
G L+ + R F + + + + DLKPEN+L+ D
Sbjct: 118 LGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFK 610
S + T +Y APE+I G + D W+FG L EL G F+
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 90
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 249
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +VMEY G L + + GK+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 650 PQHR 653
P+ R
Sbjct: 256 PEER 259
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 81
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 240
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 326 GILGM-----SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQT 380
G +GM + F L+++G G+ GSV+ C +A+K S+K L +
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVD 53
Query: 381 EREILQ-------LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTL--RQRQPGKHFS 431
E+ L+ L H + ++ + D + EYC GG L + +F
Sbjct: 54 EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK 113
Query: 432 EYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLV 466
E + H + +V+ D+KP N+ +
Sbjct: 114 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 78
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 237
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 396 LYTHF------ETDRFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + + LV++Y P R K +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + D+ L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 381 EREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
E ++++ L+HP + D+ + EY GG L + + ++ F
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKD 116
Query: 441 XXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H + +++RDL N LVR++ +++++DF L+
Sbjct: 117 IASGMAYL-HSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL 603
+ +P + + VG ++APE+I G + VD ++FGI L E++
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 334 RLLKRLGCGDIGSVYLSELS-STRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L+KRLG G G V++ + ST+ A+K + +++ + L A +++ L H
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNSTKV--AVKTLKPGTMSVQAFLEEAN----LMKTLQHDK 69
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDL-HTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
L LY + ++ EY G L L+ + GK F
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ NVLV + ++DF L+
Sbjct: 130 -NYIHRDLRAANVLVSESLMCKIADFGLA 157
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP 629
++ APE I D W+FGI L+E++ YGK P+ G N A + + Q R P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-ADVMTALSQGYRMP 231
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 333 FRLLKRLGCG--DIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
+ LL +G G D+ +V L+ T Y ++ ++ + S + +T Q E + +L +H
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLFNH 69
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + F D +V + G L +E A + H
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLS 475
+G V+R +K ++L+ DG + LS
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLS 154
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 10 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 64
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 65 LVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLA 151
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 650 PQHR 653
P+ R
Sbjct: 246 PEER 249
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 227
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 79
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 136
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 103
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 160
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V+EY G L + + GK+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 650 PQHR 653
P+ R
Sbjct: 256 PEER 259
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 77
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 134
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + K S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 238
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 152 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 182
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 76
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 77
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 134
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 103
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 160
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 333 FRLLKRLGCG--DIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
+ LL +G G D+ +V L+ T Y ++ ++ + S + +T Q E + +L +H
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLFNH 85
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P + F D +V + G L +E A + H
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLS 475
+G V+R +K ++L+ DG + LS
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLS 170
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 336 LKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
L+ +G G GSV + + R A+K + + S R E +L+ L H +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 396 LYTHF----ETDRFS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
L F + FS ++ G DL+ + + Q S+ +F H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIH 148
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+++RDLKP NV V +D + + DF L+
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 569 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGS 612
+V T Y APEI+ H VD W+ G + ELL GK F GS
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 91
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 148
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 226
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 78
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 135
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 91
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 148
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 85
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 146 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 99
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 156
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 409 VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRD 468
++ + G DL+ + + Q ++ +F H +++RDLKP N+ V +
Sbjct: 100 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 469 DGHIMLSDFDLS 480
D + + DF L+
Sbjct: 157 DCELKILDFGLA 168
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 74
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 134
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 135 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 99
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 156
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V+EY G L + + GK+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 650 PQHR 653
P+ R
Sbjct: 256 PEER 259
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 67
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 128 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T +V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 332 HFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
+FR+ K++GCG+ G + L + T Y A+K+ S A + L R QL
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY----RFYKQLSATE 60
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
+P +Y +++ +V+E DL L R F+
Sbjct: 61 GVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLITRMEYV 116
Query: 450 HMLGVVYRDLKPENVLV 466
H ++YRD+KPEN LV
Sbjct: 117 HTKSLIYRDVKPENFLV 133
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 85
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 146 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 70
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 131 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 569 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGS 612
+V T Y APEI+ H VD W+ G + ELL GK F GS
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 336 LKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
L+ +G G GSV + + R A+K + + S R E +L+ L H +
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 396 LYTHF----ETDRFS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
L F + FS ++ G DL+ + + Q S+ +F H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIH 140
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+++RDLKP NV V +D + + DF L+
Sbjct: 141 SAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 98
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 158
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 159 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFP 629
V T Y APE+I G G+ VD W+ G + E++ K F G + +N V +QL P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR-DYIDQWNKVIEQLGTP 244
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 72
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 132
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 133 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 302 GSANKPHKGNDPRW---KAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSST--- 355
GS + H +P++ + I+ RD +L LG G G V+L+E +
Sbjct: 16 GSGLQGHIIENPQYFSDACVHHIKRRDIVLKWE-------LGEGAFGKVFLAECHNLLPE 68
Query: 356 --RCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYC 413
+ A+K + +AS ++R+ R E E+L +L H + + R +V EY
Sbjct: 69 QDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125
Query: 414 PGGDLHT-LRQRQPGKHF---SEYAA-------RFXXXXXXXXXXXXHMLGV--VYRDLK 460
GDL+ LR P E A + ++ G+ V+RDL
Sbjct: 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA 185
Query: 461 PENVLVRDDGHIMLSDFDLS 480
N LV + + DF +S
Sbjct: 186 TRNCLVGQGLVVKIGDFGMS 205
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS- 631
++ PE I + D W+FG+ L E+ YGK P+ N + + G++L P +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 285
Query: 632 PATSYASRDLIRGLLVKEPQHRLGVK 657
P YA ++RG +EPQ R +K
Sbjct: 286 PPEVYA---IMRGCWQREPQQRHSIK 308
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 69
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 129 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 650 PQHR 653
P+ R
Sbjct: 253 PEER 256
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 65
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 125
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 126 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 73
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 133
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 134 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 67
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 128 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 13 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 67
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 68 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLA 154
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 650 PQHR 653
P+ R
Sbjct: 249 PEER 252
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 67
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 128 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS- 631
++ PE I + D W+FG+ L E+ YGK P+ N + + G++L P +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 262
Query: 632 PATSYASRDLIRGLLVKEPQHRLGVK 657
P YA ++RG +EPQ R +K
Sbjct: 263 PPEVYA---IMRGCWQREPQQRHSIK 285
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 21/160 (13%)
Query: 339 LGCGDIGSVYLSELSST-----RCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFL 393
LG G G V+L+E + + A+K + +AS ++R+ R E E+L +L H +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 82
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHT-LRQRQPGKHF---SEYAA-------RFXXXXX 442
+ R +V EY GDL+ LR P E A +
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 443 XXXXXXXHMLGV--VYRDLKPENVLVRDDGHIMLSDFDLS 480
++ G+ V+RDL N LV + + DF +S
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H VV+RDLKP+N+LV G I L+DF L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL---FNVVG 623
S V T Y APE++ + + VD W+ G E+ K F+GS + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 71
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 131
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 132 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 569 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H +++RDLKP N+ V +D + + DF L
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 631 SPATSYA 637
P T Y+
Sbjct: 237 CPPTLYS 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 66
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 126
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 127 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H VV+RDLKP+N+LV G I L+DF L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL---FNVVG 623
S V T Y APE++ + + VD W+ G E+ K F+GS + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H VV+RDLKP+N+LV G I L+DF L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL---FNVVG 623
S V T Y APE++ + + VD W+ G E+ K F+GS + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 17/150 (11%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMK-VMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
K +G G G VY ++L + A+K V+ +R E +I++ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 396 LYTHFETD------RFSCLVMEYCPGGDLHTLRQRQPGKH-FSEYAARFXXXXXXXXXXX 448
L F + + LV++Y P R K +
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIM-LSDF 477
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 566 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
++S + + Y APE+I G + S++D W+ G L ELL G+ F G L ++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 650 PQHR 653
P+ R
Sbjct: 422 PEER 425
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 570 VGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVV 622
V T Y APE++ G+ +G AVD W G + E+ G+ F G + L++++
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RD+KPEN+LV G + L DF +
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFA 171
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 72
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 132 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS- 631
++ PE I + D W+FG+ L E+ YGK P+ N + + G++L P +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 256
Query: 632 PATSYASRDLIRGLLVKEPQHRLGVK 657
P YA ++RG +EPQ R +K
Sbjct: 257 PPEVYA---IMRGCWQREPQQRHSIK 279
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 21/160 (13%)
Query: 339 LGCGDIGSVYLSELSST-----RCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFL 393
LG G G V+L+E + + A+K + +AS ++R+ R E E+L +L H +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 76
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHT-LRQRQPGKHF---SEYAA-------RFXXXXX 442
+ R +V EY GDL+ LR P E A +
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 443 XXXXXXXHMLGV--VYRDLKPENVLVRDDGHIMLSDFDLS 480
++ G+ V+RDL N LV + + DF +S
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 650 PQHR 653
P+ R
Sbjct: 253 PEER 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 631 SPATSYA 637
P T Y+
Sbjct: 237 CPPTLYS 243
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 407 CLV--MEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENV 464
CL ME+C G L +++ G+ + A H +++RDLKP N+
Sbjct: 108 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI 167
Query: 465 LVRDDGHIMLSDFDL 479
+ D + + DF L
Sbjct: 168 FLVDTKQVKIGDFGL 182
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 571 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFP 629
GT Y++PE I + +G VD + G+ L ELL+ T F+ S L + + + F
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI-FD 255
Query: 630 DSPATSYASRDLIRGLLVKEPQHR 653
T L++ LL K+P+ R
Sbjct: 256 KKEKT------LLQKLLSKKPEDR 273
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 631 SPATSYA 637
P T Y+
Sbjct: 237 CPPTLYS 243
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 631 SPATSYA 637
P T Y+
Sbjct: 237 CPPTLYS 243
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L+KRLG G G V++ + A+K + +++ L AQ I++ L H
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWNGN-TKVAIKTLKPGTMSPESFLEEAQ----IMKKLKHDK 65
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + G+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV + ++DF L+
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLA 152
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL+ G+ P+ G NR L V + R P + +L+ K+
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVL-EQVERGYRMPCPQDCPISLHELMIHCWKKD 246
Query: 650 PQHR 653
P+ R
Sbjct: 247 PEER 250
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 241
Query: 631 SPATSYA 637
P T Y+
Sbjct: 242 CPPTLYS 248
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 650 PQHR 653
P+ R
Sbjct: 422 PEER 425
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 571 GTHEYLAPEIIKGEGHG---SAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
G+ ++APE+I+ + + D +++GI L+EL+ G+ P+ NR + +VG+
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255
Query: 628 FPD 630
PD
Sbjct: 256 SPD 258
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 6/150 (4%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S L R+G G G+VY + +KV+D + ++ + E +L+ H
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVD----PTPEQFQAFRNEVAVLRKTRH 91
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
+ + D + +V ++C G L+ Q K F + H
Sbjct: 92 VNILLFMGYMTKDNLA-IVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLH 149
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+++RD+K N+ + + + + DF L+
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQ---- 386
+ F L+++G G+ GSV+ C +A+K S+K L + E+ L+
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYA 61
Query: 387 ---LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTL--RQRQPGKHFSEYAARFXXXX 441
L H + ++ + D + EYC GG L + +F E +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLV 466
H + +V+ D+KP N+ +
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233
Query: 631 SPATSYA 637
P T Y+
Sbjct: 234 CPPTLYS 240
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 238
Query: 631 SPATSYA 637
P T Y+
Sbjct: 239 CPPTLYS 245
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 270 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQ---- 386
+ F L+++G G+ GSV+ C +A+K S+K L + E+ L+
Sbjct: 7 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYA 59
Query: 387 ---LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTL--RQRQPGKHFSEYAARFXXXX 441
L H + ++ + D + EYC GG L + +F E +
Sbjct: 60 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 119
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLV 466
H + +V+ D+KP N+ +
Sbjct: 120 VGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 70
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 264
Query: 631 SPATSYA 637
P T Y+
Sbjct: 265 CPPTLYS 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 239
Query: 631 SPATSYA 637
P T Y+
Sbjct: 240 CPPTLYS 246
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 241
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 242 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 140
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 71
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 63
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 64 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLA 150
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 650 PQHR 653
P+ R
Sbjct: 245 PEER 248
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 242
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 243 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 141
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 69
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 129 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 270 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 168
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D LRQ ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLRQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQ---- 386
+ F L+++G G+ GSV+ C +A+K S+K L + E+ L+
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK-------RSKKPLAGSVDEQNALREVYA 61
Query: 387 ---LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTL--RQRQPGKHFSEYAARFXXXX 441
L H + ++ + D + EYC GG L + +F E +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLV 466
H + +V+ D+KP N+ +
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 631 SPATSYA 637
P T Y+
Sbjct: 617 CPPTLYS 623
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 11 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 65
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLA 152
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 650 PQHR 653
P+ R
Sbjct: 247 PEER 250
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHE-LLYGKTPFKGSGNRATLFNVV-GQQLRF-PD 630
+++APE I SA D W FG+ + E L++G PF+G N + + G++L P+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 631 SPATSYA 637
P T Y+
Sbjct: 617 CPPTLYS 623
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 53/177 (29%)
Query: 450 HMLGVVYRDLKPENVLV-RDDGHIMLSDFDLSLRCAVSPT-LIKTSSLDSDPSRRGPGGS 507
H G+V+RD+KP N L R L DF L+ + L+K ++ R
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQER------ 187
Query: 508 FCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARSM 567
C Q C S+C+ ++++ PR+
Sbjct: 188 -CSQNKC----SICL-------------SRRQQVAPRA---------------------- 207
Query: 568 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPF-KGSGNRATLFNVV 622
GT + APE++ K +A+D W+ G+ LL G+ PF K S + L ++
Sbjct: 208 ---GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIM 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 650 PQHR 653
P+ R
Sbjct: 256 PEER 259
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 274
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 275 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 313
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 173
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 34/134 (25%)
Query: 570 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL---FNVVG-- 623
V T Y APE+I + VD W+ G + E++ GKT FKGS + L V G
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245
Query: 624 -----QQLR----------FPDSPATSYAS---------RDLIRGLLVKEPQHRLGVKRG 659
Q+L+ P+ +AS +L+ +LV + + R+
Sbjct: 246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV----T 301
Query: 660 ATEIKQHPFFEGVN 673
A E HP+FE ++
Sbjct: 302 AGEALAHPYFESLH 315
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+R L+ +G G G+V + T A+K + + S RA E +L+ + H
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHMRHEN 85
Query: 393 LPTLYTHF---ET-DRFS--CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
+ L F ET D F+ LVM + G DL L + + E +F
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGL 141
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N+ V +D + + DF L+
Sbjct: 142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 68
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 242
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 243 F--RQRVSXECQHLIRWCLALRPXDRPTFE----EIQNHPWMQDV 281
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 141
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQ----TEREILQ 386
S ++ +G G G V+L Y+ K DK ++ + K+ + ++ E E++
Sbjct: 27 SELTFVQEIGSGQFGLVHLG-------YWLNK--DKVAIKTIKEGSMSEDDFIEEAEVMM 77
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
L HP L LY CLV E+ G L + Q G +E
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 137
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V++RDL N LV ++ I +SDF ++
Sbjct: 138 YLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMT 170
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 522 IQPACFIPRIFPQKN---KKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAP 578
++ AC I R +N + S+ G+ L + T + ++ +P
Sbjct: 139 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-----PVKWASP 193
Query: 579 EIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGN 614
E+ + S D W+FG+ + E+ GK P++ N
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 650 PQHR 653
P+ R
Sbjct: 256 PEER 259
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 254
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 255 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 153
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQR--QPGKH----FSEYAARFXXXXXX 443
HP + + YT F LVM+ GG + + + G+H E
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G ++RD+K N+L+ +DG + ++DF +S
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 19/115 (16%)
Query: 568 SFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+FVGT ++APE+++ G+ D W+FGI EL G P+ L +
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND- 238
Query: 627 RFPDSPATSYASRDLIRGL-----------LVKEPQHRLGVKRGATEIKQHPFFE 670
P S T +++++ L K+P+ R A E+ +H FF+
Sbjct: 239 --PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR----PTAAELLRHKFFQ 287
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 241
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 242 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 140
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 650 PQHR 653
P+ R
Sbjct: 422 PEER 425
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 390 HPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQR--QPGKH----FSEYAARFXXXXXX 443
HP + + YT F LVM+ GG + + + G+H E
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G ++RD+K N+L+ +DG + ++DF +S
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 19/115 (16%)
Query: 568 SFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQL 626
+FVGT ++APE+++ G+ D W+FGI EL G P+ L +
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND- 243
Query: 627 RFPDSPATSYASRDLIRGL-----------LVKEPQHRLGVKRGATEIKQHPFFE 670
P S T +++++ L K+P+ R A E+ +H FF+
Sbjct: 244 --PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR----PTAAELLRHKFFQ 292
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY+ A+K + + ++ + L A +EI HP L L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 94
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +V EY P G+L + + + + ++R
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 155 DLAARNCLVGENHVVKVADFGLS 177
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 37/145 (25%)
Query: 559 AEPTAARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNR 615
+EPT +S V T Y APE+ + + A+D W+ G L EL + F G R
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 616 ATL---FNVVG-----QQLR----------------FPDSPATSYASR------DLIRGL 645
L F ++G LR +P +P R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 646 LVKEPQHRLGVKRGATEIKQHPFFE 670
LV +P R+ K E +HP+ +
Sbjct: 290 LVFDPAKRITAK----EALEHPYLQ 310
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 15/157 (9%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVM---DKASLASRKKLTRAQTEREILQL 387
S F+L LG G G V + T A+K + DK A R E +IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 388 LDHPFLPTLYTHFETDRFS----CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
H + T++ D F +++ DLH + Q S+ ++
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H V++RDLKP N+L+ + + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 12/151 (7%)
Query: 336 LKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI--LQLLDHPFL 393
L LG G +VY + +T A+K + + K REI LQ L HP +
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQ----PGKHFSEYAARFXXXXXXXXXXXX 449
L F LV ++ DL + + H Y
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYM-----LMTLQGLEYL 128
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+L+ ++G + L+DF L+
Sbjct: 129 HQHWILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 242
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 243 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 141
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 6/147 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 187 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEAFLQEAQ----VMKKLRHEK 241
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 242 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDL 479
V+RDL+ N+LV ++ ++DF L
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGL 327
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 650 PQHR 653
P+ R
Sbjct: 423 PEER 426
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 270 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 168
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 570 VGTH-----EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV- 622
VG H ++ PE I + D W+FG+ L E+ YGK P+ N + +
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
Query: 623 GQQLRFPD-SPATSYASRDLIRGLLVKEPQHRLGVK 657
G+ L P P Y D++ G +EPQ RL +K
Sbjct: 251 GRVLERPRVCPKEVY---DVMLGCWQREPQQRLNIK 283
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 228 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 126
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 261
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 262 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 300
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 160
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 70
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+ME+ P G L Q+ + +Y ++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 131 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 570 VGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 228 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 126
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 17/133 (12%)
Query: 360 AMKVMDKASLASRK---KLTRAQTER-----EILQL--LDHPFLPTLYTHFETDRFSCLV 409
A V+ KA ++ K +++ER E+ QL ++HP + LY CLV
Sbjct: 21 AFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLV 78
Query: 410 MEYCPGGDLH-TLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML---GVVYRDLKPENVL 465
MEY GG L+ L +P +++ A H + +++RDLKP N+L
Sbjct: 79 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 138
Query: 466 VRDDGHIM-LSDF 477
+ G ++ + DF
Sbjct: 139 LVAGGTVLKICDF 151
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 507 SFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARS 566
S+C+Q C Q ++ + P+ + KP + L + T+ ++ TA
Sbjct: 107 SWCLQ---------CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 157
Query: 567 MSFV----GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
+ + G+ ++APE+ +G + D +++GI L E++ + PF G A
Sbjct: 158 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 226
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 227 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 125
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 226
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 227 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA--LQEELARSFFWQVLE 125
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 228 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 126
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ + H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKIRHEK 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 650 PQHR 653
P+ R
Sbjct: 256 PEER 259
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 322 RARDGILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTR 377
+A+ IL + + +K LG G G+VY + E + + A+K++++ + K
Sbjct: 29 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVE 86
Query: 378 AQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
E I+ +DHP L L + LV + P G L S+ +
Sbjct: 87 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 145
Query: 438 XXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 146 CVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 249
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 250 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 288
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 148
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 70
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q + +Y ++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGM 130
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N+LV ++ + + DF L+
Sbjct: 131 EYLGTKR-----YIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 334 RLLKRLGCGDIGSVYLSELS-STRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L+K+LG G G V++ + ST+ A+K + +++ + L A +++ L H
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTKV--AVKTLKPGTMSVQAFLEEAN----LMKTLQHDK 68
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDL-HTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
L LY + ++ E+ G L L+ + GK F
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ NVLV + ++DF L+
Sbjct: 129 -NYIHRDLRAANVLVSESLMCKIADFGLA 156
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP 629
++ APE I + W+FGI L+E++ YGK P+ G N A + + + Q R P
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN-ADVMSALSQGYRMP 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 231 YLDQLNHILG 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 181 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 241 YLDQLNHILG 250
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 233 YLDQLNHILG 242
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 558 VAEPTAARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLHELLYGKTPFKGSGN 614
+A T V T Y APEI+ H VD W+ G + ELL G+T F G+ +
Sbjct: 191 LARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDK--ASLASRKKLTRAQTEREILQLLDH 390
++ L +G G GSV + + T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 391 PFLPTLYTHFETDR----FS-CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXX 445
+ L F R F+ ++ + G DL+ + + Q ++ +F
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 446 XXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RDLKP N+ V +D + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 237 YLDQLNHILG 246
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 231 YLDQLNHILG 240
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 17/133 (12%)
Query: 360 AMKVMDKASLASRK---KLTRAQTER-----EILQL--LDHPFLPTLYTHFETDRFSCLV 409
A V+ KA ++ K +++ER E+ QL ++HP + LY CLV
Sbjct: 20 AFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLV 77
Query: 410 MEYCPGGDLH-TLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML---GVVYRDLKPENVL 465
MEY GG L+ L +P +++ A H + +++RDLKP N+L
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 466 VRDDGHIM-LSDF 477
+ G ++ + DF
Sbjct: 138 LVAGGTVLKICDF 150
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 507 SFCVQPACIEPSSVCIQPACFIPRIFPQKNKKKTRKPRSELGLPSSTLPELVAEPTAARS 566
S+C+Q C Q ++ + P+ + KP + L + T+ ++ TA
Sbjct: 106 SWCLQ---------CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156
Query: 567 MSFV----GTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 616
+ + G+ ++APE+ +G + D +++GI L E++ + PF G A
Sbjct: 157 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 225
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 226 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 264
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 124
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 178 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 238 YLDQLNHILG 247
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S ++ +G G G V+L + + A+K + + +++ + A E++ L H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEA----EVMMKLSH 61
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P L LY CLV E+ G L + Q G +E
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V++RDL N LV ++ I +SDF ++
Sbjct: 122 A-SVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 179 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 239 YLDQLNHILG 248
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 170 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 230 YLDQLNHILG 239
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 558 VAEPTAARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSG 613
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 614 NRATLFNVVG 623
L +++G
Sbjct: 237 YLDQLNHILG 246
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 222
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 223 F--RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 121
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL+ N+LV ++ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 650 PQHR 653
P+ R
Sbjct: 256 PEER 259
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYG 605
R + + + Y APE+I G +G +D W+ G L ELL G
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H GVV+RDL P N+L+ D+ I + DF+L+
Sbjct: 151 HEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 36/148 (24%)
Query: 557 LVAEPTAARSMSFVGTHE-YLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPFKGS-- 612
L E TA + + TH Y APE++ + +G VD W+ G + E+ K F+GS
Sbjct: 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239
Query: 613 -GNRATLFNVVG----------------QQLR--FPDSPATSY---------ASRDLIRG 644
+ VVG LR + PA ++ + DLI
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAK 299
Query: 645 LLVKEPQHRLGVKRGATEIKQHPFFEGV 672
+L PQ R+ ++ +HP+FE +
Sbjct: 300 MLEFNPQRRISTEQAL----RHPYFESL 323
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
RL +LG G G V++ + T A+K + +++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY + +V EY G L + + GK+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL N+LV ++ ++DF L+
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 591 DWWTFGIFLHELLY-GKTPFKGSGNRATLFNVVGQQLRFPDSPATSYASRDLIRGLLVKE 649
D W+FGI L EL G+ P+ G NR L + V + R P P + DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 650 PQHR 653
P+ R
Sbjct: 256 PEER 259
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H GVV+RDL P N+L+ D+ I + DF+L+
Sbjct: 151 HEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 36/148 (24%)
Query: 557 LVAEPTAARSMSFVGTHE-YLAPEII-KGEGHGSAVDWWTFGIFLHELLYGKTPFKGS-- 612
L E TA + + TH Y APE++ + +G VD W+ G + E+ K F+GS
Sbjct: 180 LAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239
Query: 613 -GNRATLFNVVG----------------QQLR--FPDSPATSY---------ASRDLIRG 644
+ VVG LR + PA ++ + DLI
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAK 299
Query: 645 LLVKEPQHRLGVKRGATEIKQHPFFEGV 672
+L PQ R+ ++ +HP+FE +
Sbjct: 300 MLEFNPQRRISTEQAL----RHPYFESL 323
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 569 FVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLR 627
F GT Y PE I+ HG + W+ GI L++++ G PF+ ++ Q+
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 222
Query: 628 FPDSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
F S + LIR L P R + EI+ HP+ + V
Sbjct: 223 F--RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQL 387
S +++ LG G GSVY S A+K ++K ++ +L TR E +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 388 LDHPF--LPTLYTHFET-DRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ F + L FE D F ++ P DL + E AR
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 121
Query: 445 XXXXXHMLGVVYRDLKPENVLVR-DDGHIMLSDF 477
H GV++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S ++ +G G G V+L + + A+K + + +++ + A E++ L H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEA----EVMMKLSH 64
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P L LY CLV E+ G L + Q G +E
Sbjct: 65 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 124
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V++RDL N LV ++ I +SDF ++
Sbjct: 125 AC-VIHRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 18/159 (11%)
Query: 332 HFRLLKRLGCGDIGSVYLSELS----STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
H + L++LG G+ GSV + +T A+K K ++ + L + E EIL+
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 68
Query: 388 LDHPFLPTL--YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGK----HFSEYAARFXXXX 441
L H + + R L+MEY P G L Q+ + +Y ++
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 128
Query: 442 XXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++R+L N+LV ++ + + DF L+
Sbjct: 129 EYLGTKR-----YIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 569 FVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
+V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 415 GGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIML 474
G DL+ L + Q H S + H V++RDLKP N+L+ + +
Sbjct: 129 GADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 475 SDFDLS 480
DF L+
Sbjct: 186 CDFGLA 191
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYG 605
R + + + Y APE+I G +G +D W+ G L ELL G
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S ++ +G G G V+L + + A+K + + +++ + A E++ L H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEA----EVMMKLSH 61
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P L LY CLV E+ G L + Q G +E
Sbjct: 62 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V++RDL N LV ++ I +SDF ++
Sbjct: 122 AC-VIHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 522 IQPACFIPRIFPQKN---KKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAP 578
++ AC I R +N + S+ G+ L + T + ++ +P
Sbjct: 119 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-----PVKWASP 173
Query: 579 EIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGN 614
E+ + S D W+FG+ + E+ GK P++ N
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 61/172 (35%), Gaps = 23/172 (13%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL------SSTRCYFAMKVMDKASLASRKKLTRAQTE 381
+ +S R ++ LG G VY L T+ + DKA R++
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 65
Query: 382 REILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHT-LRQRQPGKHFSEYAARFXXX 440
R LQ HP + L D+ ++ YC GDLH L R P
Sbjct: 66 RARLQ---HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 441 XXXXXXXXXHMLG-------------VVYRDLKPENVLVRDDGHIMLSDFDL 479
H++ VV++DL NVLV D ++ +SD L
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 557 LVAEPTAARSMSFVGTH----EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG 611
L E AA +G ++APE I D W++G+ L E+ YG P+ G
Sbjct: 174 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 233
Query: 612 SGNRATLFNVVGQQLRFP---DSPATSYA 637
N+ + + +Q+ P D PA YA
Sbjct: 234 YSNQDVVEMIRNRQV-LPCPDDCPAWVYA 261
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 70
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
+V+RDL NVLV+ H+ ++DF
Sbjct: 130 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 61/172 (35%), Gaps = 23/172 (13%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL------SSTRCYFAMKVMDKASLASRKKLTRAQTE 381
+ +S R ++ LG G VY L T+ + DKA R++
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 82
Query: 382 REILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHT-LRQRQPGKHFSEYAARFXXX 440
R LQ HP + L D+ ++ YC GDLH L R P
Sbjct: 83 RARLQ---HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 441 XXXXXXXXXHMLG-------------VVYRDLKPENVLVRDDGHIMLSDFDL 479
H++ VV++DL NVLV D ++ +SD L
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 557 LVAEPTAARSMSFVGTH----EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG 611
L E AA +G ++APE I D W++G+ L E+ YG P+ G
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 250
Query: 612 SGNRATLFNVVGQQLRFP---DSPATSYA 637
N+ + + +Q+ P D PA YA
Sbjct: 251 YSNQDVVEMIRNRQV-LPCPDDCPAWVYA 278
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 77
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 78 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLA 164
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 242
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 243 CPEELY---QLMRLCWKERPEDR 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S ++ +G G G V+L + + A+K + + +++ + A E++ L H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEA----EVMMKLSH 59
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P L LY CLV E+ G L + Q G +E
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V++RDL N LV ++ I +SDF ++
Sbjct: 120 AC-VIHRDLAARNCLVGENQVIKVSDFGMT 148
Score = 29.3 bits (64), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 522 IQPACFIPRIFPQKN---KKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAP 578
++ AC I R +N + S+ G+ L + T + ++ +P
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-----PVKWASP 171
Query: 579 EIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGN 614
E+ + S D W+FG+ + E+ GK P++ N
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 70
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
+V+RDL NVLV+ H+ ++DF
Sbjct: 130 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 75
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 76 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 241 CPEELY---QLMRLCWKERPEDR 260
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 72
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
+V+RDL NVLV+ H+ ++DF
Sbjct: 132 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 78
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 79 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLA 165
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 243
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 244 CPEELY---QLMRLCWKERPEDR 263
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 14/150 (9%)
Query: 335 LLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLP 394
LK LG G G V + + A+K++ + S++ + + A+ ++ L H L
Sbjct: 28 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 82
Query: 395 TLYTHFETDRFSCLVMEYCPGG----DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
LY R ++ EY G L +R R + E
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 140
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV D G + +SDF LS
Sbjct: 141 ---FLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYG 605
R + + Y APE+I G +G +D W+ G L ELL G
Sbjct: 255 RVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 79
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 80 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLA 166
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 244
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 245 CPEELY---QLMRLCWKERPEDR 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 69
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 235 CPEELY---QLMRLCWKERPEDR 254
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 6/150 (4%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S ++ +G G G V+L + + A+K + + +++ + A E++ L H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEA----EVMMKLSH 62
Query: 391 PFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
P L LY CLV E+ G L + Q G +E
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 122
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V++RDL N LV ++ I +SDF ++
Sbjct: 123 AC-VIHRDLAARNCLVGENQVIKVSDFGMT 151
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 483 CAVSPTLIKTSSLDSDPSRRGPGGSFCVQPACIEPSSVC-----IQPACFIPRIFPQKN- 536
C V+ + D ++RG + + C++ VC ++ AC I R +N
Sbjct: 79 CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLD---VCEGMAYLEEACVIHRDLAARNC 135
Query: 537 --KKKTRKPRSELGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWT 594
+ S+ G+ L + T + ++ +PE+ + S D W+
Sbjct: 136 LVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-----PVKWASPEVFSFSRYSSKSDVWS 190
Query: 595 FGIFLHELL-YGKTPFKGSGN 614
FG+ + E+ GK P++ N
Sbjct: 191 FGVLMWEVFSEGKIPYENRSN 211
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 32/133 (24%)
Query: 566 SMSFVGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG- 623
S++ + + Y APE++ G + ++D W+ G EL+ GK F G + L ++
Sbjct: 198 SVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
Query: 624 ----------------QQLRFPDSPATSY----------ASRDLIRGLLVKEPQHRLGVK 657
++RFP A + + DL+ +L EP R+
Sbjct: 258 MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI--- 314
Query: 658 RGATEIKQHPFFE 670
E HPFF+
Sbjct: 315 -NPYEAMAHPFFD 326
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 51/187 (27%)
Query: 333 FRLLKRLGCGDIGSV-YLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
+ L K LG G G V + ++ S + + KV+ +R E +I+++LDH
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR--------ELDIMKVLDHV 60
Query: 392 FLPTLYTHFET--------------------------------------DRFSCLVMEYC 413
+ L +F T +++ ++MEY
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 414 PGGDLHTLRQR--QPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVR-DDG 470
P LH + + + G+ H LG+ +RD+KP+N+LV D
Sbjct: 121 PD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN 179
Query: 471 HIMLSDF 477
+ L DF
Sbjct: 180 TLKLCDF 186
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 68
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 71
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 72 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLA 158
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 236
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 237 CPEELY---QLMRLCWKERPEDR 256
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQR-----QPGKHFSEYAARFXXXXXX 443
DHP + Y TDRF + +E C +L L + + K EY
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 444 XXXXXXHMLGVVYRDLKPENVLVR-------------DDGHIMLSDFDL 479
H L +++RDLKP+N+LV ++ I++SDF L
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 322 RARDGILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTR 377
+A+ IL + + +K LG G G+VY + E + + A+K++++ + K
Sbjct: 6 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVE 63
Query: 378 AQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
E I+ +DHP L L + LV + P G L S+ +
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 438 XXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 123 CVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
VL+ D H L D L P
Sbjct: 162 VLI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 381 EREILQLLDHPFLPTLYTHF--ETDR-FSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
+RE+ L + P + +F E DR F + +E C TL++ K F+
Sbjct: 65 DREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA----TLQEYVEQKDFAHLGLEP 120
Query: 438 XXXXXXXXXXXXHM--LGVVYRDLKPENVLV---RDDGHI--MLSDFDLSLRCAV 485
H+ L +V+RDLKP N+L+ G I M+SDF L + AV
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 335 LLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLP 394
LLK LG G G V L + A+K++ + S++ + AQT + L HP L
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEFFQEAQT----MMKLSHPKLV 66
Query: 395 TLYTHFETDRFSCLVMEYCPGGDL-HTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
Y + +V EY G L + LR G S+ H
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF- 125
Query: 454 VVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV D + +SDF ++
Sbjct: 126 -IHRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 70
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 71 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLA 157
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 235
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 236 CPEELY---QLMRLCWKERPEDR 255
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQR-----QPGKHFSEYAARFXXXXXX 443
DHP + Y TDRF + +E C +L L + + K EY
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 444 XXXXXXHMLGVVYRDLKPENVLV 466
H L +++RDLKP+N+LV
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILV 148
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 14/150 (9%)
Query: 335 LLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLP 394
LK LG G G V + + A+K++ + S++ + + A+ ++ L H L
Sbjct: 28 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 82
Query: 395 TLYTHFETDRFSCLVMEYCPGG----DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
LY R ++ EY G L +R R + E
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 140
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV D G + +SDF LS
Sbjct: 141 ---FLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQR-----QPGKHFSEYAARFXXXXXX 443
DHP + Y TDRF + +E C +L L + + K EY
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 444 XXXXXXHMLGVVYRDLKPENVLV 466
H L +++RDLKP+N+LV
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILV 148
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 245
Query: 631 SPATSY 636
PA Y
Sbjct: 246 CPAALY 251
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 570 VGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 75
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 76 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNV-VGQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 241 CPEELY---QLMRLCWKERPEDR 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 74
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 75 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLA 161
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 239
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 240 CPEELY---QLMRLCWKERPEDR 259
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 69
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 235 CPEELY---QLMRLCWKERPEDR 254
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 389 DHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQR-----QPGKHFSEYAARFXXXXXX 443
DHP + Y TDRF + +E C +L L + + K EY
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 444 XXXXXXHMLGVVYRDLKPENVLVR-------------DDGHIMLSDFDL 479
H L +++RDLKP+N+LV ++ I++SDF L
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 69
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 70 LVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 559 AEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRAT 617
AE TA F ++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 162 AEXTAREGAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 618 LFNVV-GQQLRFPDS-PATSYASRDLIRGLLVKEPQHR 653
+ N+ G ++ PD+ P Y L+R + P+ R
Sbjct: 220 IQNLERGYRMVRPDNCPEELY---QLMRLCWKERPEDR 254
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 69
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVV-GQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 235 CPEELY---QLMRLCWKERPEDR 254
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 245
Query: 631 SPATSY 636
PA Y
Sbjct: 246 CPAALY 251
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 20/163 (12%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA-SRKKLTRAQTERE--- 383
L ++ + K +G G+ G V C +K+ K ++ + K L TE++
Sbjct: 13 LDATNISIDKVVGAGEFGEV---------CSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 384 ------ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
I+ DHP + L + +V EY G L + ++ + F+
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVG 122
Query: 438 XXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 262
Query: 631 SPATSY 636
PA Y
Sbjct: 263 CPAALY 268
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 58/156 (37%), Gaps = 6/156 (3%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
L ++ + K +G G+ G V L S A+K + + K+ E I
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASI 87
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ DHP + L + +V EY G L + R+ F+
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRGIAS 146
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 77/208 (37%), Gaps = 36/208 (17%)
Query: 312 DPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLS---ELSSTRCYFAMKVMDKAS 368
DP+W+ ++ +LG K LG G+ G V + L Y + V
Sbjct: 15 DPKWE----FPRKNLVLG-------KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 369 LASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTL----RQR 424
AS +L +E +L+ ++HP + LY D L++EY G L R+
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 425 QPG-------------KHFSEYAARFXXXXXXXXXXXXHM-----LGVVYRDLKPENVLV 466
PG H E A M + +V+RDL N+LV
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV 183
Query: 467 RDDGHIMLSDFDLSLRCAVSPTLIKTSS 494
+ + +SDF LS + +K S
Sbjct: 184 AEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
+ V T Y APE+I G D W+ G + E G T F+ NR L
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 570 VGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 570 VGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVG 623
V T Y APEI + +G+ ++D W+ G L E+L + F G L +++G
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 247
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 70
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 75
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 272
Query: 631 SPATSY 636
PA Y
Sbjct: 273 CPAALY 278
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 6/156 (3%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
L ++ + K +G G+ G V L S A+K + + K+ E I
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASI 97
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ DHP + L + +V EY G L + ++ + F+
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIAS 156
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 6/156 (3%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
L ++ + K +G G+ G V L S A+K + + K+ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASI 99
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ DHP + L + +V EY G L + ++ + F+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 6/156 (3%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
L ++ + K +G G+ G V L S A+K + + K+ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASI 99
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ DHP + L + +V EY G L + ++ + F+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 74
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 133
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 134 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 6/156 (3%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
L ++ + K +G G+ G V L S A+K + + K+ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASI 99
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ DHP + L + +V EY G L + ++ + F+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 6/156 (3%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
L ++ + K +G G+ G V L S A+K + + K+ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASI 99
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ DHP + L + +V EY G L + ++ + F+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 6/156 (3%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
L ++ + K +G G+ G V L S A+K + + K+ E I
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASI 99
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ DHP + L + +V EY G L + ++ + F+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIAS 158
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 71
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K L G G+VY + E + A+K + +A+ S K E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 75
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+M+ P G L + S+Y +
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 68
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 77/208 (37%), Gaps = 36/208 (17%)
Query: 312 DPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLS---ELSSTRCYFAMKVMDKAS 368
DP+W+ ++ +LG K LG G+ G V + L Y + V
Sbjct: 15 DPKWE----FPRKNLVLG-------KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 369 LASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTL----RQR 424
AS +L +E +L+ ++HP + LY D L++EY G L R+
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 425 QPG-------------KHFSEYAARFXXXXXXXXXXXXHM-----LGVVYRDLKPENVLV 466
PG H E A M + +V+RDL N+LV
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV 183
Query: 467 RDDGHIMLSDFDLSLRCAVSPTLIKTSS 494
+ + +SDF LS + +K S
Sbjct: 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQ 211
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 68
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 112 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 166
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 167 VMI-DHEHRKLRLIDWGLAEFYHP 189
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 77/208 (37%), Gaps = 36/208 (17%)
Query: 312 DPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLS---ELSSTRCYFAMKVMDKAS 368
DP+W+ ++ +LG K LG G+ G V + L Y + V
Sbjct: 15 DPKWE----FPRKNLVLG-------KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 369 LASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTL----RQR 424
AS +L +E +L+ ++HP + LY D L++EY G L R+
Sbjct: 64 NASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 425 QPG-------------KHFSEYAARFXXXXXXXXXXXXHM-----LGVVYRDLKPENVLV 466
PG H E A M + +V+RDL N+LV
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV 183
Query: 467 RDDGHIMLSDFDLSLRCAVSPTLIKTSS 494
+ + +SDF LS + +K S
Sbjct: 184 AEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 71
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 93
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 94 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 152
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 153 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ +PE I SA D W++GI L E++ YG+ P+ N+ + V + R P D
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLPPPMD 274
Query: 631 SPATSY 636
PA Y
Sbjct: 275 CPAALY 280
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 64
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 65 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV D ++DF L+
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLA 151
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNV-VGQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 229
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 230 CPEELY---QLMRLCWKERPEDR 249
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 106 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 160
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 161 VMI-DHEHRKLRLIDWGLAEFYHP 183
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 106 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 160
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 161 VMI-DHEHRKLRLIDWGLAEFYHP 183
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 71
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE +K A D W FG+ L E+ YG+ P+ G L + + R P D
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 631 SPATSY 636
P Y
Sbjct: 240 CPQDIY 245
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
++G RLL++LG G G V E S A+K + L+ + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 384 ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHF-----SEYAARFX 438
+ LDH L LY T +V E P G L R R+ HF S YA +
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 121
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
++RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKR-----FIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 107 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 161
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 162 VMI-DHEHRKLRLIDWGLAEFYHP 184
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE +K A D W FG+ L E+ YG+ P+ G L + + R P D
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 631 SPATSY 636
P Y
Sbjct: 250 CPQDIY 255
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
++G RLL++LG G G V E S A+K + L+ + + E
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 384 ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHF-----SEYAARFX 438
+ LDH L LY T +V E P G L R R+ HF S YA +
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 131
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
++RDL N+L+ + + DF L
Sbjct: 132 EGMGYLESKR-----FIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE +K A D W FG+ L E+ YG+ P+ G L + + R P D
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 631 SPATSY 636
P Y
Sbjct: 244 CPQDIY 249
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
++G RLL++LG G G V E S A+K + L+ + + E
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 384 ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHF-----SEYAARFX 438
+ LDH L LY T +V E P G L R R+ HF S YA +
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 125
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
++RDL N+L+ + + DF L
Sbjct: 126 EGMGYLESKR-----FIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 404 RFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPEN 463
R LV E+ D L Q ++Y RF H +G+++RD+KP N
Sbjct: 105 RTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 159
Query: 464 VLVRDDGHIMLSDFDLSLRCAVSP 487
V++ D H L D L P
Sbjct: 160 VMI-DHEHRKLRLIDWGLAEFYHP 182
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE +K A D W FG+ L E+ YG+ P+ G L + + R P D
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 631 SPATSY 636
P Y
Sbjct: 240 CPQDIY 245
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
++G RLL++LG G G V E S A+K + L+ + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 384 ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHF-----SEYAARFX 438
+ LDH L LY T +V E P G L R R+ HF S YA +
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 121
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
++RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKR-----FIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE I SA D W+FGI + E++ YG+ P+ N + + R P D
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-KAINDGFRLPTPMD 274
Query: 631 SPATSY 636
P+ Y
Sbjct: 275 CPSAIY 280
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 61/174 (35%), Gaps = 17/174 (9%)
Query: 337 KRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTL 396
K +G G+ G VY L ++ K + K L TE++ + L +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSG-------KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ 102
Query: 397 YTHFETDRFS---------CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXX 447
++H R ++ EY G L + + G+ FS
Sbjct: 103 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMK 161
Query: 448 XXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSR 501
+ V+RDL N+LV + +SDF LS P T+S P R
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 14/150 (9%)
Query: 335 LLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLP 394
LK LG G G V + + A+K++ + S++ + + A+ ++ L H L
Sbjct: 19 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 73
Query: 395 TLYTHFETDRFSCLVMEYCPGG----DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
LY R ++ EY G L +R R + E
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 131
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV D G + +SDF LS
Sbjct: 132 ---FLHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE +K A D W FG+ L E+ YG+ P+ G L + + R P D
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 631 SPATSY 636
P Y
Sbjct: 240 CPQDIY 245
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
++G RLL++LG G G V E S A+K + L+ + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 384 ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHF-----SEYAARFX 438
+ LDH L LY T +V E P G L R R+ HF S YA +
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 121
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
++RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKR-----FIHRDLAARNLLLATRDLVKIGDFGL 157
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE +K A D W FG+ L E+ YG+ P+ G L + + R P D
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 631 SPATSY 636
P Y
Sbjct: 250 CPQDIY 255
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
++G RLL++LG G G V E S A+K + L+ + + E
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 384 ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHF-----SEYAARFX 438
+ LDH L LY T +V E P G L R R+ HF S YA +
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 131
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
++RDL N+L+ + + DF L
Sbjct: 132 EGMGYLESKR-----FIHRDLAARNLLLATRDLVKIGDFGL 167
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 78
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 137
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 138 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 65
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 124
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 125 EGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 20/184 (10%)
Query: 328 LGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLA-SRKKLTRAQTERE--- 383
L S ++ + +G G+ G V C +K+ K +A + K L TE++
Sbjct: 40 LDASCIKIERVIGAGEFGEV---------CSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD 90
Query: 384 ------ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
I+ DHP + L + +V+E+ G L ++ G+ F+
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVG 149
Query: 438 XXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDS 497
+G V+RDL N+LV + +SDF LS P + T++
Sbjct: 150 MLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 498 DPSR 501
P R
Sbjct: 210 IPVR 213
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE I+ SA D W++GI + E++ YG+ P+ N+ + + + R P D
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLPAPMD 272
Query: 631 SPA 633
PA
Sbjct: 273 CPA 275
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE +K A D W FG+ L E+ YG+ P+ G L + + R P D
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 631 SPATSY 636
P Y
Sbjct: 244 CPQDIY 249
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 15/161 (9%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSEL---SSTRCYFAMKVMDKASLASRKKLTRAQTERE 383
++G RLL++LG G G V E S A+K + L+ + + E
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 384 ILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHF-----SEYAARFX 438
+ LDH L LY T +V E P G L R R+ HF S YA +
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 125
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
++RDL N+L+ + + DF L
Sbjct: 126 EGMGYLESKR-----FIHRDLAARNLLLATRDLVKIGDFGL 161
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 334 RLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF- 392
R+ K++GCG+ G + L + T Y A+K+ S A + L E + L
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHL-----EYRFYKQLGSAGE 57
Query: 393 -LPTLYTHFETDRFSCLVMEYCPGG--DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXX 449
LP +Y +++ +V+E DL L R F+
Sbjct: 58 GLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLLSRMEYV 113
Query: 450 HMLGVVYRDLKPENVLVRDDGH-----IMLSDFDLS 480
H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 114 HSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP---D 630
+ APE I SA D W++GI + E++ YG+ P+ N+ + V + R P D
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-KAVEEGYRLPSPMD 251
Query: 631 SPATSY 636
PA Y
Sbjct: 252 CPAALY 257
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Query: 381 EREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXX 440
E I+ DHP + L + +V EY G L T ++ G+ F+
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLR 131
Query: 441 XXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+G V+RDL N+L+ + +SDF LS
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 14/150 (9%)
Query: 335 LLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLP 394
LK LG G G V + + A+K++ + S++ + + A+ ++ L H L
Sbjct: 12 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 66
Query: 395 TLYTHFETDRFSCLVMEYCPGG----DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
LY R ++ EY G L +R R + E
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 124
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV D G + +SDF LS
Sbjct: 125 ---FLHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQ 386
+S + L ++G G G V+ + T KV K L +K A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKT----GQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 387 LLDHPFLPTL----------YTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAAR 436
LL H + L Y + + LV ++C DL L K F+ +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIY--LVFDFCEH-DLAGLLSNVLVK-FTLSEIK 128
Query: 437 FXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RD+K NVL+ DG + L+DF L+
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 14/150 (9%)
Query: 335 LLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLP 394
LK LG G G V + + A+K++ + S++ + + A+ ++ L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 67
Query: 395 TLYTHFETDRFSCLVMEYCPGG----DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
LY R ++ EY G L +R R + E
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 125
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV D G + +SDF LS
Sbjct: 126 ---FLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 62
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 122 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 317 AILAIRARDGILGM-SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKA-SLASRKK 374
A+L R+ D + + +++ +G G G V + T A+K + A + + K
Sbjct: 40 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 99
Query: 375 LTRAQTEREILQLLDHPFL--------PTL-YTHFETDRFSCLVMEYCPGGDLH-TLRQR 424
R E +IL+ H + PT+ Y F++ +ME DLH +
Sbjct: 100 --RTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSS 153
Query: 425 QPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCA 484
QP + R+ H V++RDLKP N+LV ++ + + DF ++
Sbjct: 154 QP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 485 VSPT 488
SP
Sbjct: 211 TSPA 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY--LSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREI 384
IL + F+ +K LG G G+VY L + + +M+ S K E +
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 385 LQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXX 444
+ +D+P + L T L+ + P G L + S+Y +
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 445 XXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 164 MNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 575 YLAPEIIKGEGH---GSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDS 631
Y PEII + G D W G L+ L + + PF+ +V + P
Sbjct: 216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK----LRIVNGKYSIPPH 271
Query: 632 PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVN 673
LIR +L P+ RL + ++++ VN
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 454 VVYRDLKPENVLVRDDGHIMLSDF 477
+++RDLK EN+L+ + G I L DF
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 17/162 (10%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQ 386
+S + L ++G G G V+ + T KV K L +K A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKT----GQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 387 LLDHPFLPTLYTHFETD---RFSC-----LVMEYCPGGDLHTLRQRQPGKHFSEYAARFX 438
LL H + L T C LV ++C DL L K F+ +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRV 130
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RD+K NVL+ DG + L+DF L+
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 13/162 (8%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
RLG G G V+ E T A+K + R ++ RA+ E L P + LY
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE-ELMACAGLTSPRIVPLY 151
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ + ME GG L L + Q E A + H +++
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 458 DLKPENVLVRDDG-HIMLSDFDLSLRCAVSPTLIKTSSLDSD 498
D+K +NVL+ DG H L DF ++ + P + S L D
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAV--CLQPDGLGKSLLTGD 249
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 14/150 (9%)
Query: 335 LLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLP 394
LK LG G G V + + A+K++ + S++ + + A+ ++ L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 67
Query: 395 TLYTHFETDRFSCLVMEYCPGG----DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
LY R ++ EY G L +R R + E
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 125
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV D G + +SDF LS
Sbjct: 126 ---FLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 14/150 (9%)
Query: 335 LLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLP 394
LK LG G G V + + A+K++ + S++ + + A+ ++ L H L
Sbjct: 8 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLV 62
Query: 395 TLYTHFETDRFSCLVMEYCPGG----DLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXH 450
LY R ++ EY G L +R R + E
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 120
Query: 451 MLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV D G + +SDF LS
Sbjct: 121 ---FLHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 17/162 (10%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQ 386
+S + L ++G G G V+ + T KV K L +K A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKT----GQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 387 LLDHPFLPTLYTHFETD---RFSC-----LVMEYCPGGDLHTLRQRQPGKHFSEYAARFX 438
LL H + L T C LV ++C DL L K F+ +
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRV 130
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RD+K NVL+ DG + L+DF L+
Sbjct: 131 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 51/261 (19%)
Query: 259 MERNCESTKGSV----------RGDSLESAKTSISRASDSSG--LSDDSNWSNITGSANK 306
M R+ E+TKGS +GD+++ K R D+ G +S S +S + +
Sbjct: 91 MIRDSETTKGSYSLSVRDYDPRQGDTVKHYKI---RTLDNGGFYISPRSTFSTLQELVDH 147
Query: 307 PHKGND--------------PR--WKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLS 350
KGND P+ W+ R+ + +L K+LG G G V+++
Sbjct: 148 YKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESL------KLEKKLGAGQFGEVWMA 201
Query: 351 ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVM 410
+ A+K M S++ L A +++ L H L L+ + +
Sbjct: 202 TYNK-HTKVAVKTMKPGSMSVEAFLAEAN----VMKTLQHDKLVKLHAVVTKEPIYIITE 256
Query: 411 EYCPGGDLHTLRQ----RQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLV 466
G L L+ +QP +++A+ ++RDL+ N+LV
Sbjct: 257 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-----NYIHRDLRAANILV 311
Query: 467 RDDGHIMLSDFDLSLRCAVSP 487
++DF L+ A P
Sbjct: 312 SASLVCKIADFGLARVGAKFP 332
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGN 614
++ APE I D W+FGI L E++ YG+ P+ G N
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N LV D + + DF L+
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
L +++RD+KP N+L+ G+I L DF +S
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 571 GTHEYLAPEIIK----GEGHGSAVDWWTFGIFLHELLYGKTPF 609
G Y+APE I +G+ D W+ GI L+EL G+ P+
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 51/254 (20%)
Query: 259 MERNCESTKGSV----------RGDSLESAKTSISRASDSSG--LSDDSNWSNITGSANK 306
M R+ E+TKGS +GD+++ K R D+ G +S S +S + +
Sbjct: 97 MIRDSETTKGSYSLSVRDYDPRQGDTVKHYKI---RTLDNGGFYISPRSTFSTLQELVDH 153
Query: 307 PHKGND--------------PR--WKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLS 350
KGND P+ W+ R+ + +L K+LG G G V+++
Sbjct: 154 YKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESL------KLEKKLGAGQFGEVWMA 207
Query: 351 ELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVM 410
+ A+K M S++ L A +++ L H L L+ + +
Sbjct: 208 TYNK-HTKVAVKTMKPGSMSVEAFLAEAN----VMKTLQHDKLVKLHAVVTKEPIYIITE 262
Query: 411 EYCPGGDLHTLRQ----RQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLV 466
G L L+ +QP +++A+ ++RDL+ N+LV
Sbjct: 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-----NYIHRDLRAANILV 317
Query: 467 RDDGHIMLSDFDLS 480
++DF L+
Sbjct: 318 SASLVCKIADFGLA 331
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGN 614
++ APE I D W+FGI L E++ YG+ P+ G N
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
L V++RD+KP NVL+ G + + DF +S
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPT 488
H V++RDLKP N+LV ++ + + DF ++ SP
Sbjct: 175 HSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 11/141 (7%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
RLG G G V+ E T A+K + R ++ RA+ E L P + LY
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE-ELMACAGLTSPRIVPLY 132
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ + ME GG L L + Q E A + H +++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 458 DLKPENVLVRDDG-HIMLSDF 477
D+K +NVL+ DG H L DF
Sbjct: 191 DVKADNVLLSSDGSHAALCDF 211
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFPDS 631
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 254
Query: 632 -PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 255 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 291
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E ++Q LD+P++ + E + + LVME G L+ + Q +H +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 133
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFPDS 631
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 254
Query: 632 -PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 255 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 291
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E ++Q LD+P++ + E + + LVME G L+ + Q +H +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 133
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L++RLG G G V++ + A+K + + S++ L A +++ L H
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQHQR 65
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHML 452
L LY T ++ EY G L + G +
Sbjct: 66 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++R+L+ N+LV D ++DF L+
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLA 152
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNV-VGQQLRFPDS 631
++ APE I D W+FGI L E++ +G+ P+ G N + N+ G ++ PD+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 230
Query: 632 -PATSYASRDLIRGLLVKEPQHR 653
P Y L+R + P+ R
Sbjct: 231 CPEELY---QLMRLCWKERPEDR 250
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFPDS 631
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 252
Query: 632 -PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 253 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 289
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E ++Q LD+P++ + E + + LVME G L+ + Q +H +
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 131
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 172
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
+ V T Y PE+I G D W+ G L E G T F+ NR L
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATL-FNVVGQQLRFPDS 631
++APE +K ++ D W+FG+ L E+ + P++G N L F + G L PD+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
+ V T Y PE+I G D W+ G L E G T F+ NR L
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 17/162 (10%)
Query: 330 MSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKL---TRAQTEREILQ 386
+S + L ++G G G V+ + T KV K L +K A E +ILQ
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKT----GQKVALKKVLMENEKEGFPITALREIKILQ 71
Query: 387 LLDHPFLPTLYTHFETD---RFSC-----LVMEYCPGGDLHTLRQRQPGKHFSEYAARFX 438
LL H + L T C LV ++C DL L K F+ +
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRV 129
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H +++RD+K NVL+ DG + L+DF L+
Sbjct: 130 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATL-FNVVGQQLRFPDS 631
++APE +K ++ D W+FG+ L E+ + P++G N L F + G L PD+
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 253
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATL-FNVVGQQLRFPDS 631
++APE +K ++ D W+FG+ L E+ + P++G N L F + G L PD+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 70
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
+V+RDL NVLV+ H+ ++DF
Sbjct: 130 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
+ V T Y PE+I G D W+ G L E G T F+ NR L
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRF---P 629
+++APE I + D W++GIFL EL G +P+ G + + ++ + R
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQH 666
+PA Y D+++ +P R K+ I++
Sbjct: 288 HAPAEMY---DIMKTCWDADPLKRPTFKQIVQLIEKQ 321
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 75
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
+V+RDL NVLV+ H+ ++DF
Sbjct: 135 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K LG G G+VY + E + A+K + +A+ S K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 68
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDF 477
+V+RDL NVLV+ H+ ++DF
Sbjct: 128 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFPDS 631
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 238
Query: 632 -PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 239 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 275
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E ++Q LD+P++ + E + + LVME G L+ + Q +H +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 117
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFPDS 631
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 244
Query: 632 -PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 245 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 281
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E ++Q LD+P++ + E + + LVME G L+ + Q +H +
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 123
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 164
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFP-D 630
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 238
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 239 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 275
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E ++Q LD+P++ + E + + LVME G L+ + Q +H +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 117
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGN 614
++ APE I D W+FGI L E++ YG+ P+ G N
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 14/152 (9%)
Query: 333 FRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPF 392
+L K+LG G G V+++ + A+K M S++ L A +++ L H
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEAN----VMKTLQHDK 71
Query: 393 LPTLYTHFETDRFSCLVMEYCPGGDLHTLRQ----RQPGKHFSEYAARFXXXXXXXXXXX 448
L L+ + + G L L+ +QP +++A+
Sbjct: 72 LVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR- 130
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL+ N+LV ++DF L+
Sbjct: 131 ----NYIHRDLRAANILVSASLVCKIADFGLA 158
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATL-FNVVGQQLRFPDS 631
++APE +K ++ D W+FG+ L E+ + P++G N L F + G L PD+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATL-FNVVGQQLRFPDS 631
++APE +K ++ D W+FG+ L E+ + P++G N L F + G L PD+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
L V++RD+KP NVL+ G + + DF +S
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATL-FNVVGQQLRFPDS 631
++APE +K ++ D W+FG+ L E+ + P++G N L F + G L PD+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFPDS 631
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 232
Query: 632 -PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 233 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 269
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E ++Q LD+P++ + E + + LVME G L+ + Q +H +
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 111
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 152
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATL-FNVVGQQLRFPDS 631
++APE +K ++ D W+FG+ L E+ + P++G N L F + G L PD+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 255
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRF---P 629
+++APE I + D W++GIFL EL G +P+ G + + ++ + R
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQH 666
+PA Y D+++ +P R K+ I++
Sbjct: 272 HAPAEMY---DIMKTCWDADPLKRPTFKQIVQLIEKQ 305
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRF---P 629
+++APE I + D W++GIFL EL G +P+ G + + ++ + R
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQH 666
+PA Y D+++ +P R K+ I++
Sbjct: 290 HAPAEMY---DIMKTCWDADPLKRPTFKQIVQLIEKQ 323
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFP-D 630
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 234
Query: 631 SPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 235 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 271
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 380 TEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXX 439
E ++Q LD+P++ + E + + LVME G L+ + Q +H +
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 113
Query: 440 XXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 154
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATL-FNVVGQQLRFPDS 631
++APE +K ++ D W+FG+ L E+ + P++G N L F + G L PD+
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 257
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRF---P 629
+++APE I + D W++GIFL EL G +P+ G + + ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQH 666
+PA Y D+++ +P R K+ I++
Sbjct: 295 HAPAEMY---DIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +++E+ G+L + + S + ++R
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRF---P 629
+++APE I + D W++GIFL EL G +P+ G + + ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 630 DSPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQH 666
+PA Y D+++ +P R K+ I++
Sbjct: 295 HAPAEMY---DIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFPDS 631
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 596
Query: 632 -PATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGV 672
P Y DL+ + ++R G A E++ ++ V
Sbjct: 597 CPREMY---DLMNLCWTYDVENRPGF--AAVELRLRNYYYDV 633
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 337 KRLGCGDIGSV---YLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFL 393
K LG G+ G+V Y + + ++A+ + K A E ++Q LD+P++
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQQLDNPYI 432
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
+ E + + LVME G L+ Q+ +H +
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN 489
Query: 454 VVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLS 516
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP 629
+ APE I SA D W++GI + E++ YG+ P+ N+ + + + R P
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 254
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 14/168 (8%)
Query: 320 AIRARDGILGMSHFRLLKRLGCGDIGSVYLSELS---STRCYFAMKVMDKASLASRKKLT 376
A+R + S ++ K +G G+ G V L A+K + KA +++
Sbjct: 18 AVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQR-R 75
Query: 377 RAQTEREILQLLDHPFLPTLYTHFETDRFSC----LVMEYCPGGDLHTLRQRQPGKHFSE 432
+E I+ DHP + H E C ++ EY G L ++ G+ F+
Sbjct: 76 DFLSEASIMGQFDHPNI----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTV 130
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ V+RDL N+LV + +SDF +S
Sbjct: 131 IQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKA--SLASRKKLTRAQTEREILQLLDHPFLPTL 396
+G G G VYL+ +T A+K +++ L K++ R T IL L ++ L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLKSDYIIRL 90
Query: 397 YTHFETD---RFSCL--VMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
Y D +F L V+E DL L + +E + H
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHE 147
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
G+++RDLKP N L+ D + + DF L+
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP 629
+ APE I SA D W++GI + E++ YG+ P+ N+ + + + R P
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 239
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 14/168 (8%)
Query: 320 AIRARDGILGMSHFRLLKRLGCGDIGSVYLSELS---STRCYFAMKVMDKASLASRKKLT 376
A+R + S ++ K +G G+ G V L A+K + KA +++
Sbjct: 3 AVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQR-R 60
Query: 377 RAQTEREILQLLDHPFLPTLYTHFETDRFSC----LVMEYCPGGDLHTLRQRQPGKHFSE 432
+E I+ DHP + H E C ++ EY G L ++ G+ F+
Sbjct: 61 DFLSEASIMGQFDHPNI----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTV 115
Query: 433 YAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ V+RDL N+LV + +SDF +S
Sbjct: 116 IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 574 EYLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKG-SGNRATLFNVVGQQLRFP 629
++ APE I S D W+FG+ + E YG+ P++G G+ T G+++ P
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 595
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 337 KRLGCGDIGSV---YLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFL 393
K LG G+ G+V Y + + ++A+ + K A E ++Q LD+P++
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQQLDNPYI 433
Query: 394 PTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLG 453
+ E + + LVME G L+ Q+ +H +
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN 490
Query: 454 VVYRDLKPENVLVRDDGHIMLSDFDLS 480
V+RDL NVL+ + +SDF LS
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLS 517
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + R +K LG G G+VY + + + + A+KV+ + + S K E
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEA 70
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ + P++ L T LV + P G L + G+ S+ +
Sbjct: 71 YVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIA 129
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ +V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 KGMSYLED-VRLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 20/164 (12%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDH 390
S + LK LGCG G V+ + + A+K K L + + A E +I++ LDH
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKIIRRLDH 67
Query: 391 PFLPTLYTHF-------------ETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARF 437
+ ++ T+ S +++ DL + ++ P E AR
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP---LLEEHARL 124
Query: 438 XXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIM-LSDFDLS 480
H V++RDLKP N+ + + ++ + DF L+
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +++E+ G+L + + S + ++R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 575 YLAPEIIKGEGHGSAVDWWTFGIFLHELL-YGKTPFKGSGNRATLFNVVGQQLRFP 629
+ APE I SA D W++GI + E++ YG+ P+ N+ + + + R P
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 233
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 14/157 (8%)
Query: 331 SHFRLLKRLGCGDIGSVYLSELS---STRCYFAMKVMDKASLASRKKLTRAQTEREILQL 387
S ++ K +G G+ G V L A+K + KA +++ +E I+
Sbjct: 8 SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQR-RDFLSEASIMGQ 65
Query: 388 LDHPFLPTLYTHFETDRFSC----LVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXX 443
DHP + H E C ++ EY G L ++ G+ F+
Sbjct: 66 FDHPNI----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIG 120
Query: 444 XXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ V+RDL N+LV + +SDF +S
Sbjct: 121 SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ +++E+ G+L + + S + ++R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K L G G+VY + E + A+K + +A+ S K E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 75
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ ++ E+ G+L + + S + ++R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 407 CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLV 466
LV EY D L Q +++ RF H G+++RD+KP NV++
Sbjct: 111 ALVFEYINNTDFKQLYQI-----LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 8/158 (5%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVY----LSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
IL + F+ +K L G G+VY + E + A+K + +A+ S K E
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEA 68
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXX 442
++ +D+P + L T L+ + P G L + S+Y +
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 443 XXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 407 CLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLV 466
LV EY D L Q +++ RF H G+++RD+KP NV++
Sbjct: 116 ALVFEYINNTDFKQLYQI-----LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
L V++RD+KP NVL+ G + DF +S
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H G+++RDLKP N L+ D + + DF L+
Sbjct: 148 HESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYG 605
VGT Y+APE ++GE + D ++FG+ L E++ G
Sbjct: 195 IVGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITG 230
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 3/154 (1%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQ 386
+L L +++G G+ G V+ L + A+K + +L K Q R IL+
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEAR-ILK 167
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
HP + L + +VME GGD T R G
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGM 226
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV + + +SDF +S
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYG 605
VGT Y+APE ++GE + D ++FG+ L E++ G
Sbjct: 195 IVGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITG 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 7/149 (4%)
Query: 335 LLKRLGCGDIGSVY---LSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
L + LG G G VY + + A+K K K+ + +E I++ LDHP
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHP 85
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ L E + + ++ME P G+L +R
Sbjct: 86 HIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLES 143
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ V+RD+ N+LV + L DF LS
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRR 502
+ +RDLK +N+LV+ +G ++D L++R + T ++D P+ R
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-----TDTIDIAPNHR 175
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 569 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYG 605
VGT Y+APE ++GE + D ++FG+ L E++ G
Sbjct: 189 IVGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITG 224
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRR 502
+ +RDLK +N+LV+ +G ++D L++R + T ++D P+ R
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-----TDTIDIAPNHR 178
>pdb|3CNF|T Chain T, 3.88 Angstrom Structure Of Cytoplasmic Polyhedrosis Virus
By Cryo-Electron Microscopy
Length = 1057
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 125 YVPISQNKSDAACLMKSLSMKGPFLEDLSIRVPPKKQISAVLSPA---ESLVEEPSELGA 181
Y I + S + + +S+ G L D+S V P V+ PA E+L +E +
Sbjct: 841 YALIREQISLTENMTQVVSIGGRNLADIS--VVPLNMKYVVIDPATRIETLTQEKKNIEV 898
Query: 182 LSSPFSVPRASQNTENS 198
S PFS AS + EN+
Sbjct: 899 QSRPFSFDAASMDLENN 915
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 7/149 (4%)
Query: 335 LLKRLGCGDIGSVY---LSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHP 391
L + LG G G VY + + A+K K K+ + +E I++ LDHP
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHP 73
Query: 392 FLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHM 451
+ L E + + ++ME P G+L +R
Sbjct: 74 HIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLES 131
Query: 452 LGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ V+RD+ N+LV + L DF LS
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRR 502
+ +RDLK +N+LV+ +G ++D L++R + T ++D P+ R
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-----TDTIDIAPNHR 173
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ ++ E+ G+L + + S + ++R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ ++ E+ G+L + + S + ++R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 568 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATL 618
+ V T Y APE+I G D W+ G L E G T F ++ L
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRR 502
+ +RDLK +N+LV+ +G ++D L++R + T ++D P+ R
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-----TDTIDIAPNHR 172
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R + + Y +PE++ G + A+D W+ G L E+ G+ F G+ N N + +
Sbjct: 195 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 253
Query: 625 QLRFP 629
L P
Sbjct: 254 VLGIP 258
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 3/154 (1%)
Query: 327 ILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQ 386
+L L +++G G+ G V+ L + A+K + +L K Q R IL+
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEAR-ILK 167
Query: 387 LLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXX 446
HP + L + +VME GGD T R G
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGM 226
Query: 447 XXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
++RDL N LV + + +SDF +S
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R + + Y +PE++ G + A+D W+ G L E+ G+ F G+ N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 272
Query: 625 QLRFP 629
L P
Sbjct: 273 VLGIP 277
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRR 502
+ +RDLK +N+LV+ +G ++D L++R + T ++D P+ R
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-----TDTIDIAPNHR 198
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 565 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQ 624
R + + Y +PE++ G + A+D W+ G L E+ G+ F G+ N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 272
Query: 625 QLRFP 629
L P
Sbjct: 273 VLGIP 277
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 339 LGCGDIGSVY---LSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPT 395
LG G G VY + + A+K K K+ + +E I++ LDHP +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHPHIVK 73
Query: 396 LYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVV 455
L E + + ++ME P G+L +R + V
Sbjct: 74 LIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESINCV 131
Query: 456 YRDLKPENVLVRDDGHIMLSDFDLS 480
+RD+ N+LV + L DF LS
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLS 156
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSSLDSDPSRR 502
+ +RDLK +N+LV+ +G ++D L++R + T ++D P+ R
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA-----TDTIDIAPNHR 211
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ ++ E+ G+L + + S + ++R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
Query: 338 RLGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLY 397
+LG G G VY A+K + + ++ + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 398 THFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXXXHMLGVVYR 457
+ ++ E+ G+L + + S + ++R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 458 DLKPENVLVRDDGHIMLSDFDLS 480
DL N LV ++ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 65/176 (36%), Gaps = 30/176 (17%)
Query: 320 AIRARDGILGMSHFRLLKRLGCGDIGSV----YLSELSSTRCYFAMKVMDKASLASRKKL 375
A++ I + R LK LG G G+V ++ E S + +KV++ S R+
Sbjct: 2 AMKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSF 59
Query: 376 TRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQP--------G 427
+ LDH + L + CPG L + Q P
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRL-------------LGLCPGSSLQLVTQYLPLGSLLDHVR 106
Query: 428 KHFSEYAARFXXXXXXXXXXXXHML---GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+H + + L G+V+R+L NVL++ + ++DF ++
Sbjct: 107 QHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 56/162 (34%), Gaps = 22/162 (13%)
Query: 332 HFRLLKR---LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLL 388
H R LK+ LG G G V L T V KA A R+ ++EI
Sbjct: 29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEI---- 84
Query: 389 DHPFLPTLYTHFETDRFSC----------LVMEYCPGGDLHTLRQRQPGKHFSEYAARFX 438
L TLY C LVMEY P G +LR P
Sbjct: 85 --DILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG---SLRDYLPRHSIGLAQLLLF 139
Query: 439 XXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
H ++RDL NVL+ +D + + DF L+
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLR 482
H + +RD K +NVL++ D +L+DF L++R
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVR 172
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 30/169 (17%)
Query: 327 ILGMSHFRLLKRLGCGDIGSV----YLSELSSTRCYFAMKVMDKASLASRKKLTRAQTER 382
I + R LK LG G G+V ++ E S + +KV++ S R+
Sbjct: 27 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHM 84
Query: 383 EILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQP--------GKHFSEYA 434
+ LDH + L + CPG L + Q P +H
Sbjct: 85 LAIGSLDHAHIVRL-------------LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALG 131
Query: 435 ARFXXXXXXXXXXXXHML---GVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ + L G+V+R+L NVL++ + ++DF ++
Sbjct: 132 PQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF---------KGSGNRATLFN 620
+ T EY +PE++ G G D W+ + EL+ G F K + A +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 621 VVGQ----QLRFPDSPATSYASRDLIRGL 645
++G+ LR T + SR L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 21/72 (29%)
Query: 450 HMLGVVYRDLKPENVLVRDDGHIMLSDFDL--------------SLR------CAVSPTL 489
H G++++DLK +NV D+G ++++DF L LR C ++P +
Sbjct: 147 HAKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 490 IKTSSLDSDPSR 501
I+ S D++ +
Sbjct: 206 IRQLSPDTEEDK 217
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 570 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPF---------KGSGNRATLFN 620
+ T EY +PE++ G G D W+ + EL+ G F K + A +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 621 VVGQ----QLRFPDSPATSYASRDLIRGL 645
++G+ LR T + SR L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 15/184 (8%)
Query: 310 GNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVY---LSELSSTRCYFAMKVMDK 366
G PR L + D ++ + L K LG G+ GSV L + T A+K M K
Sbjct: 13 GLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-K 71
Query: 367 ASLASRKKLTRAQTEREILQLLDHP-FLPTLYTHFETDRFSC----LVMEYCPGGDLHTL 421
+S++++ +E ++ HP + L E +++ + GDLHT
Sbjct: 72 LDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTY 131
Query: 422 ----RQRQPGKHF-SEYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSD 476
R KH + +F + ++RDL N ++RDD + ++D
Sbjct: 132 LLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVAD 190
Query: 477 FDLS 480
F LS
Sbjct: 191 FGLS 194
>pdb|3I4U|A Chain A, Crystal Structure Analysis Of A Helicase Associated Domain
Length = 270
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 339 LGCGDIGSVYLSELSSTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYT 398
LGC + +S LS ++ K DK +LA +KK QTE DH L +Y
Sbjct: 65 LGCSEEMLTIVSMLSVQNVFYRPK--DKQALADQKKAKFHQTEG------DHLTLLAVYN 116
Query: 399 HFETDRFS 406
++ ++FS
Sbjct: 117 SWKNNKFS 124
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 52/151 (34%), Gaps = 10/151 (6%)
Query: 333 FRLLKRLGCGDIGSVY-LSELSSTRCYFAMKVMD--KASLASRKKLTRAQTEREILQLLD 389
F+ L RLG G G V+ + R Y + M + +KL + ++ Q
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ--- 115
Query: 390 HPFLPTLYTHFETDRFSCLVMEYC-PGGDLHTLRQRQPGKHFSEYAARFXXXXXXXXXXX 448
HP L +E L E C P H G E
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHC---EAWGASLPEAQVWGYLRDTLLALAH 172
Query: 449 XHMLGVVYRDLKPENVLVRDDGHIMLSDFDL 479
H G+V+ D+KP N+ + G L DF L
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 453 GVVYRDLKPENVLVRDDGHIMLSDFDLSLR 482
+ +RDLK +N+LV+ +G ++D L+++
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVK 191
>pdb|2QH9|A Chain A, The Crystal Structure Of A Protein Of Unknown Function
From Archaeoglobus Fulgidus Dsm 4304
pdb|2QH9|B Chain B, The Crystal Structure Of A Protein Of Unknown Function
From Archaeoglobus Fulgidus Dsm 4304
Length = 184
Score = 29.6 bits (65), Expect = 7.0, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 1 MRSSHMEKVPESKALSGKLPAAVQVSHLCASSVI 34
+ S EK+ ++ + G P V++SHL AS++I
Sbjct: 143 LTPSEAEKLVKASLIKGNXPEPVRISHLVASAII 176
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 456 YRDLKPENVLVRDDGHIMLSDFDLS 480
+RD+KPEN+LV D L DF ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA 181
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 16/173 (9%)
Query: 322 RARDGILGMSHFRLLKRLGCGDIGSVYLSELSSTRCYF---AMKVMDKASLASRKKLTRA 378
+ D ++ F L + LG G+ GSV ++L F A+K++ KA + + +
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEF 72
Query: 379 QTEREILQLLDHPFLPTLYTHFETDR------FSCLVMEYCPGGDLHT--LRQRQPGKHF 430
E ++ DHP + L R +++ + GDLH L R F
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 431 S---EYAARFXXXXXXXXXXXXHMLGVVYRDLKPENVLVRDDGHIMLSDFDLS 480
+ + RF ++RDL N ++ +D + ++DF LS
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTVCVADFGLS 184
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,472,666
Number of Sequences: 62578
Number of extensions: 874187
Number of successful extensions: 4398
Number of sequences better than 100.0: 939
Number of HSP's better than 100.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 2111
Number of HSP's gapped (non-prelim): 1828
length of query: 730
length of database: 14,973,337
effective HSP length: 106
effective length of query: 624
effective length of database: 8,340,069
effective search space: 5204203056
effective search space used: 5204203056
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)