BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004791
(730 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/694 (57%), Positives = 511/694 (73%), Gaps = 6/694 (0%)
Query: 21 LNKYPFCKSSSI-SSLPLPLDPDPPDLPSQIFTILSTHPTTWQRHTSITKLIPLLSPSHI 79
+ + FC S + +LP + D +P ++ +ILS W + S+ ++ +SPSH+
Sbjct: 37 VTRRQFCSVSPLLRNLPEE-ESDSMSVPHRLLSILSK--PNWHKSPSLKSMVSAISPSHV 93
Query: 80 SSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSC 139
SSLFSLDL+P+TAL+FS+WISQ P +KHSV SY+SLL LLI N + KI LM+KSC
Sbjct: 94 SSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSC 153
Query: 140 SLDKEILFVLDFLRRVNESGS-EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNM 198
+ L+VLD R++N+ E KL + YNTLL L++F LVDEMK+VY+EML++
Sbjct: 154 DSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDK 213
Query: 199 VVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGF 258
V PNIYT+N M+NG CK+GNV EA YVSKIV+AGL PD FTYTSLI+GYC+ KD++ F
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 259 RVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGL 318
+VF MP KGCRRNEV+YT+LIHGLC A+R+DEA+DLF +M +D+C PTVRTYTV+I L
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 319 CRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNV 378
C RKSEAL EM G +PN+HTYTVLID LC + K ++A ELL +MLEKGL PNV
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 379 VTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNE 438
+TYNALI+GYCK G++E A+ +++LM+S SPN RTYNELI G+CK NVH+AM +LN+
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNK 452
Query: 439 LLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGR 498
+LE+ + P ++TYNSLI GQCR G+ DSAY++L L+N+ GLVPDQ+TY+ ID+LCK R
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 499 VEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNA 558
VEEA LFDSLE+KG+ V+YTALIDGYCK GK+D+AH +LE+MLS +CLPNS T+NA
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 559 LIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG 618
LI GL + K++EA LL EKM K+G++PTV T TILI +LK+GDFDHA+ QM+S G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 619 LKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAF 678
KPD +TYT FIQ YC G+L +AED++ KM G+ PD TY+ LI Y LG AF
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 679 DVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDERK 712
DVLKRM D GCEPS HT+ LIKHL K ++K
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 281/589 (47%), Gaps = 55/589 (9%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
+V+ Y L+ L E + EM + + PNI+T+ +I+ C +A +
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
++++ GL P+ TY +LI GYC+ +E V +M + N +Y LI G C++
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
V +A+ + +M E P V TY +I G CR G A + M+ RG P+ TY
Sbjct: 442 -NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
T +ID LCK +V+EA +L + + +KG+ PNVV Y ALIDGYCK G ++ A +L+ M S
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
NC PN+ T+N LI G C + A L ++++ L PT+ T LI+ ++G D
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
AY + SG PD TY+ FI T C+ GR+ +A+ + + + G+ Y++LI
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGL----YRERKVQEALL-------- 574
GY G+ + A +L+RM C P+ +T+ +LI L Y ++K E L
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME 740
Query: 575 ------LVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMV-SLGLKPDVYTYT 627
L+EKM + V P +Y LI + + G+ A ++ D M + G+ P +
Sbjct: 741 FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFN 800
Query: 628 AFIQAYCSIGKLDEAEDLIVKMNREGIVPD---------------------SVTYTLLIC 666
A + C + K +EA ++ M G +P SV LL C
Sbjct: 801 ALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 667 AY--------------AHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK 701
Y GL+ + +++ M GC+ S TY+ LI+
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 244/491 (49%), Gaps = 22/491 (4%)
Query: 163 SLKLS--VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
S KLS + YN L+ K ++ M V +ML+ V+P++ T+N++I+G C+ GN
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
A +S + GL PD +TYTS+I C++K VE+ +F + +KG N V YT LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
G C+A +VDEA + +M +C P T+ +I GLC G+ EA +M G +
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
P V T T+LI L K+ D A +ML G P+ TY I YC+EG + A +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLI----- 455
+ M+ N SP+ TY+ LI G+ + A +L + + P+ T+ SLI
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 456 --YGQCREGH-----------LDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEA 502
YG+ + D+ ++L + E + P+ +Y I +C+ G + A
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 503 QVLFDSLEK-KGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALID 561
+ +FD +++ +GI E+++ AL+ CK K ++A +++ M+ LP + LI
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 562 GLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKP 621
GLY++ + + + + + + G + I+I+ V K+G + + L + M G K
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899
Query: 622 DVYTYTAFIQA 632
TY+ I+
Sbjct: 900 SSQTYSLLIEG 910
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 185/401 (46%), Gaps = 27/401 (6%)
Query: 153 RRVNESGSEFSLKLSVKG-------YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYT 205
+RV E+ F L KG Y L+ K VDE + +ML +PN T
Sbjct: 511 KRVEEACDLFD-SLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 206 FNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMP 265
FN +I+G C G + EA L K+V+ GL P T T LI ++ D + + F M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 266 KKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKS 325
G + + +YT I C R+ +A D+ +M E+ P + TY+ +I G +G+ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 326 EALEFFNEMSARGCEPNVHTYTVLIDCLCKEN------------------KVDEASELLN 367
A + M GCEP+ HT+ LI L + + D ELL
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSN-NCSPNARTYNELICGFCKR 426
+M+E + PN +Y LI G C+ G + A ++ D M+ N SP+ +N L+ CK
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 427 KNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTY 486
K + A ++++++ P L + LI G ++G + V + + G D+ +
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 487 SVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDG 527
+ ID + K+G VE LF+ +EK G K Y+ LI+G
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/662 (36%), Positives = 391/662 (59%), Gaps = 14/662 (2%)
Query: 61 WQRHTSITKLIPLLSPSHISSLFSLDLNPQ-TALDFSYWISQKPGFKHSVESYSSLLNLL 119
W++++S+ L+ ++P+ S + SL + + F W+ + + + LL L+
Sbjct: 54 WEKNSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLI 113
Query: 120 IRNNFTKASEKIVFLMLKSCS-LDKEIL---FVLDFLRRVNESGSEFSLKLSVKGYNTLL 175
+ + + + ++ ++K CS +KE+L + D LR V F +L+ Y++LL
Sbjct: 114 VSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREV------FGFRLNYPCYSSLL 167
Query: 176 MQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLS 235
M L+K L Y M + V + + T++N CK G AE+++SKI++ G
Sbjct: 168 MSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFV 227
Query: 236 PDTFTYTSLILGYCRNKDVEKGFRVFMMMPKK-GCRRNEVSYTNLIHGLCEAKRVDEALD 294
D+ TSL+LG+CR ++ +VF +M K+ C N VSY+ LIHGLCE R++EA
Sbjct: 228 LDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 295 LFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLC 354
L +MGE C+P+ RTYTV+I LC G +A F+EM RGC+PNVHTYTVLID LC
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 355 KENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNAR 414
++ K++EA+ + +M++ +FP+V+TYNALI+GYCK+G + A ++L +M+ C PN R
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 415 TYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLI 474
T+NEL+ G C+ ++A+ LL +L+ LSP +++YN LI G CREGH+++AYK+L +
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 475 NESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKI 534
N + PD T++ I+ CK+G+ + A + +KGI EV T LIDG CK GK
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 535 DDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTIL 594
DA +LE ++ L ++ N ++D L + KV+E L ++ K+ K+G+ P+V TYT L
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 595 IEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGI 654
++ +++ GD + R+L+ M G P+VY YT I C G+++EAE L+ M G+
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 655 VPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKH--LSNKKVDERK 712
P+ VTYT+++ Y + G + A + ++ M + G E + Y+ L++ LS K +D +
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707
Query: 713 QQ 714
+
Sbjct: 708 ES 709
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 176/658 (26%), Positives = 308/658 (46%), Gaps = 76/658 (11%)
Query: 77 SHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLML 136
S + SL LDL + +Y + GF + Y +++N L +N +T+A+E + +L
Sbjct: 165 SLLMSLAKLDLGFLAYV--TYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 137 K-SCSLDKEI--LFVLDFLRRVN--------------------------------ESG-- 159
K LD I +L F R +N E G
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 160 -SEFSLK---------LSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTM 209
F LK S + Y L+ L L+D+ ++ EM+ PN++T+ +
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 210 INGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGC 269
I+G C+ G + EA K+V+ + P TY +LI GYC++ V F + +M K+ C
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 270 RRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALE 329
+ N ++ L+ GLC + +A+ L +RM ++ P + +Y V+I GLCR G + A +
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 330 FFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYC 389
+ M+ EP+ T+T +I+ CK+ K D AS L ML KG+ + VT LIDG C
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522
Query: 390 KEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLI 449
K G AL IL+ + + N ++ K V +++L ++ + L P+++
Sbjct: 523 KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 450 TYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSL 509
TY +L+ G R G + ++++L L+ SG +P+ + Y++ I+ LC+ GRVEEA+ L ++
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 510 EKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERK- 568
+ G+ V YT ++ GY GK+D A + M+ N Y++L+ G +K
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKG 702
Query: 569 ---------------------VQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHA 607
+ E + +VE++ ++ L+ + KEG D +
Sbjct: 703 IDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF----LVTRLCKEGRTDES 758
Query: 608 HRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLI 665
+ L+ ++ G+ + +++YCS K + +LI + + G VP ++ L+I
Sbjct: 759 NDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVI 815
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 155/318 (48%), Gaps = 36/318 (11%)
Query: 131 IVFLMLKSCSLDKEILFVLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRV 190
I+ ++ K C + +E L L ++N+ G L SV Y TL+ L + + R+
Sbjct: 552 ILDMLSKGCKVKEE----LAMLGKINKLG----LVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 191 YLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCR 250
M + +PN+Y + +ING C+ G V EAE +S + +G+SP+ TYT ++ GY
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 251 NKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRT 310
N +++ M ++G N+ Y++L+ G +++ G D+ +
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK-----------GIDNSEES--- 709
Query: 311 YTVVIFGLCRVGRKSEALEFFNEMSA-----RGCEPNVHTYTVLIDCLCKENKVDEASEL 365
TV L R+++ E NE+ + GC + + L+ LCKE + DE+++L
Sbjct: 710 -TVSDIAL----RETDP-ECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDL 761
Query: 366 LNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCK 425
+ +LE+G+F + +++ YC + ++++ L+ + P+ +++ +I G K
Sbjct: 762 VQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820
Query: 426 RKNVHRAMSLLNELLEQN 443
+ RA L+ ELL N
Sbjct: 821 EGDAERARELVMELLTSN 838
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 308 bits (790), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 285/550 (51%), Gaps = 9/550 (1%)
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
EFS LS + ++ KF LV +E+L V N+YT+N MIN C+ +
Sbjct: 67 EFSKLLSA------IAKMKKFDLVISFGE-KMEILG--VSHNLYTYNIMINCLCRRSQLS 117
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
A + K+++ G P T SL+ G+C + + + M + G + + V++T L+
Sbjct: 118 FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
HGL + + EA+ L RM C+P + TY VI GLC+ G AL N+M E
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
+V Y+ +ID LCK VD+A L M KG+ P+V TY++LI C G A ++
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCR 460
L M +PN T+N LI F K + A L +E++++++ P ++TYNSLI G C
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 461 EGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVI 520
LD A ++ L+ +PD TY+ I+ CK +V + LF + ++G+ V
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 521 YTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMT 580
YT LI G+ + D+A + ++M+SD PN TYN L+DGL + K+++A+++ E +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 581 KMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLD 640
K ++P +YTY I+ E + K G + L + G+KPDV Y I +C G +
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 641 EAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
EA L +KM +G +PDS TY LI A+ G ++ +++K M TY +
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 597
Query: 701 KHLSNKKVDE 710
L + ++D+
Sbjct: 598 DMLHDGRLDK 607
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 276/577 (47%), Gaps = 72/577 (12%)
Query: 166 LSVKGYNTLLMQLSKFHL-VDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAEL 224
LS GY L + + HL +DE ++ EM+ + P+I F+ +++ K+
Sbjct: 27 LSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS 86
Query: 225 YVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLC 284
+ K+ G+S + +TY +I C CRR+++S+
Sbjct: 87 FGEKMEILGVSHNLYTYNIMI--NCL------------------CRRSQLSF-------- 118
Query: 285 EAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVH 344
AL + +M + P++ T ++ G C R SEA+ ++M G +P+
Sbjct: 119 -------ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 345 TYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLM 404
T+T L+ L + NK EA L+ RM+ KG P++VTY A+I+G CK G + AL +L+ M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 405 KSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHL 464
+ + Y+ +I CK ++V A++L E+ + + P + TY+SLI C G
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 465 DSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTAL 524
A ++L + E + P+ T++ ID K G++ EA+ LFD + ++ I V Y +L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 525 IDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGV 584
I+G+C ++D+A + M+S DCLP+ TYN LI+G + +KV + + L M++ G+
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 585 KPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG-------------------------- 618
TYT LI + D D+A + QMVS G
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 619 ---------LKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYA 669
++PD+YTY + C GK+++ DL ++ +G+ PD + Y +I +
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Query: 670 HLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK-HLSN 705
GL A+ + +M + G P TY LI+ HL +
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 163/302 (53%), Gaps = 1/302 (0%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
+V +N+L+ +K + E ++++ EM+ + PNI T+N++ING C + EA+
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
+ +V PD TY +LI G+C+ K V G +F M ++G N V+YT LIHG +A
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
D A +F++M D P + TY ++ GLC+ G+ +A+ F + EP+++TY
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
++ + +CK KV++ +L + KG+ P+V+ YN +I G+CK+GL E A + MK
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
+ P++ TYN LI + + + L+ E+ + TY L+ +G LD
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDK 607
Query: 467 AY 468
+
Sbjct: 608 GF 609
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 12/364 (3%)
Query: 372 KGLFPNVVTYNALIDGYCKEGLM----EAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
+G++ + ++Y+ + + L+ + A+ + M + P+ +++L+ K K
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
+S ++ +S L TYN +I CR L A +L + + G P T +
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 488 VFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSD 547
++ C R+ EA L D + + G + V +T L+ G + K +A +L+ERM+
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 548 DCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHA 607
C P+ TY A+I+GL + + AL L+ KM K ++ V Y+ +I+ + K D A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 608 HRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICA 667
L +M + G++PDV+TY++ I C+ G+ +A L+ M I P+ VT+ LI A
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 668 YAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLS-NKKVDERKQQCDGILFGFKCLI 726
+A G + A + M +P+ TY LI + ++DE +Q F ++
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI-------FTLMV 372
Query: 727 SQRC 730
S+ C
Sbjct: 373 SKDC 376
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 143/304 (47%), Gaps = 17/304 (5%)
Query: 108 SVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFLR------RVNESGSE 161
+V +++SL++ + +EK+ M++ S+D I+ + R++E+
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 162 FSLKLS------VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCK 215
F+L +S V YNTL+ K V + ++ +M +V N T+ T+I+G +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 216 VGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVS 275
+ A++ ++V G+ P+ TY +L+ G C+N +EK VF + K + +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 276 YTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMS 335
Y + G+C+A +V++ DLF + +P V Y +I G C+ G K EA F +M
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 336 ARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTY----NALIDGYCKE 391
G P+ TY LI ++ ++EL+ M + TY + L DG +
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 607
Query: 392 GLME 395
G +E
Sbjct: 608 GFLE 611
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 301 bits (772), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 212/728 (29%), Positives = 342/728 (46%), Gaps = 62/728 (8%)
Query: 6 PAAIFTAFTKSPGQFLNKYPFCKSSSISSLPLPLDPDPPDLPSQIFTILSTHPTTWQRHT 65
P FT+F + +YPF S S+ D D + H W
Sbjct: 51 PFVWFTSFL-----CIIRYPFVTKSGTSTYSEDFDRD--------WIRKVVHNDLWD-DP 96
Query: 66 SITKLIPL-LSPSHISS-LFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNN 123
+ KL L L+P + L L +P+ A F W + GFKHSVESY + ++L
Sbjct: 97 GLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCAR 156
Query: 124 FTKASEKIVFLMLKSCSLDKEILFVLDFLRRVNESG------------------------ 159
+ ++ M+ S D ++ VL R V G
Sbjct: 157 MYYDANSVLKEMVLS-KADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCF 215
Query: 160 ---SEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKV 216
F + + N LL + +K D++KR + +M+ P ++T+N MI+ CK
Sbjct: 216 SKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKE 275
Query: 217 GNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSY 276
G+V A ++ GL PDT TY S+I G+ + ++ F M C + ++Y
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 277 TNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSA 336
LI+ C+ ++ L+ +R M + +P V +Y+ ++ C+ G +A++F+ +M
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 337 RGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEA 396
G PN +TYT LID CK + +A L N ML+ G+ NVVTY ALIDG C M+
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 397 ALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIY 456
A ++ M + PN +YN LI GF K KN+ RA+ LLNEL + + P L+ Y + I+
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 457 GQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKA 516
G C +++A V++ + E G+ + Y+ +D K G E L D +++ I+
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 517 GEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCL-PNSYTYNALIDGLYRERKVQEALLL 575
V + LIDG CK + A R+ +D L N+ + A+IDGL ++ +V+ A L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 576 VEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCS 635
E+M + G+ P YT L++ K+G+ A L D+M +G+K D+ YT+ +
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 636 IGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGC-EPSHH 694
+L +A + +M EGI PD V +C VLK+ ++ GC + +
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEV-----LC-----------ISVLKKHYELGCIDEAVE 739
Query: 695 TYAFLIKH 702
++L+KH
Sbjct: 740 LQSYLMKH 747
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 207/413 (50%), Gaps = 13/413 (3%)
Query: 149 LDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNT 208
L+F R + +G LK +V Y+TL+ K ++ + + Y++M +VPN YT+ +
Sbjct: 352 LEFYREMKGNG----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 209 MINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKG 268
+I+ CK+GN+ +A ++++Q G+ + TYT+LI G C + +++ +F M G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 269 CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEAL 328
N SY LIHG +AK +D AL+L + +P + Y I+GLC + + A
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 329 EFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGY 388
NEM G + N YT L+D K E LL+ M E + VVT+ LIDG
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 389 CKEGLMEAALQILDLMKSN-NCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPT 447
CK L+ A+ + + ++ NA + +I G CK V A +L +++++ L P
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 448 LITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFD 507
Y SL+ G ++G++ A + + E G+ D Y+ + L ++++A+ +
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 508 SLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERML--------SDDCLPN 552
+ +GI EV+ +++ + + G ID+A L ++ +D+ LPN
Sbjct: 708 EMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPN 760
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 284/551 (51%), Gaps = 11/551 (1%)
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVP-NIYTFNTMINGCCKVGNV 219
EFS LS + +++KF +V + E + N+ +P N YT++ +IN C+ +
Sbjct: 83 EFSKLLSA------IAKMNKFDVVISLG----EQMQNLGIPHNHYTYSILINCFCRRSQL 132
Query: 220 GEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNL 279
A + K+++ G P+ T +SL+ GYC +K + + + M G + N V++ L
Sbjct: 133 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTL 192
Query: 280 IHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGC 339
IHGL + EA+ L RM C+P + TY VV+ GLC+ G A N+M
Sbjct: 193 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL 252
Query: 340 EPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQ 399
EP V Y +ID LCK +D+A L M KG+ PNVVTY++LI C G A +
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 400 ILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQC 459
+L M +P+ T++ LI F K + A L +E++++++ P+++TY+SLI G C
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 460 REGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEV 519
LD A ++ + PD TY+ I CK RVEE +F + ++G+ V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 520 IYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKM 579
Y LI G + G D A + + M+SD PN TYN L+DGL + K+++A+++ E +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 580 TKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKL 639
+ ++PT+YTY I+IE + K G + L + G+KPDV Y I +C G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 640 DEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFL 699
+EA+ L +M +G +P+S Y LI A G ++ +++K M G T +
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Query: 700 IKHLSNKKVDE 710
L + ++D+
Sbjct: 613 TNMLHDGRLDK 623
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 226/423 (53%), Gaps = 1/423 (0%)
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
+GL E K +D+A+ LF M + P++ ++ ++ + ++ + + +M G
Sbjct: 55 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
N +TY++LI+C C+ +++ A +L +M++ G PN+VT ++L++GYC + A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCR 460
+D M PN T+N LI G AM+L++ ++ + P L+TY ++ G C+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 461 EGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVI 520
G D A+ +L+ + + L P Y+ ID LCK +++A LF +E KGI+ V
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 521 YTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMT 580
Y++LI C G+ DA LL M+ P+ +T++ALID +E K+ EA L ++M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 581 KMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLD 640
K + P++ TY+ LI D A ++ + MVS PDV TY I+ +C +++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 641 EAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
E ++ +M++ G+V ++VTY +LI G A ++ K M G P+ TY L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 701 KHL 703
L
Sbjct: 474 DGL 476
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 179/340 (52%), Gaps = 1/340 (0%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
++ +V Y++L+ L + + R+ +M++ + P+++TF+ +I+ K G + EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
E ++V+ + P TY+SLI G+C + +++ ++F M K C + V+Y LI G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
C+ KRV+E +++FR M + TY ++I GL + G A E F EM + G PN
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
+ TY L+D LCK K+++A + + + P + TYN +I+G CK G +E +
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
+ P+ YN +I GFC++ + A +L E+ E P YN+LI + R+G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEA 502
+++ +++ + G D T + + L GR++++
Sbjct: 586 DREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 277/544 (50%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ +N LL ++K D + + +M +V +YT+N +IN C+ + A +
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
K+++ G P T +SL+ GYC K + + M + G R + +++T LIHGL
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+ EA+ L RM + C+P + TY VV+ GLC+ G AL N+M A E +V +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+ID LCK VD+A L M KG+ PNVVTY++LI C G A Q+L M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
+PN T+N LI F K A L ++++++++ P + TYNSL+ G C LD
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A ++ + PD TY+ I CK RVE+ LF + +G+ V YT LI
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G +G D+A + ++M+SD P+ TY+ L+DGL K+++AL + + M K +K
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
+Y YT +IE + K G D L + G+KP+V TY I CS L EA L+
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 647 VKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
KM +G +P+S TY LI A+ G ++ ++++ M T + L +
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Query: 707 KVDE 710
++D+
Sbjct: 624 RLDK 627
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 269/523 (51%), Gaps = 1/523 (0%)
Query: 184 VDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTS 243
+D+ ++ M+ + +P+I FN +++ K+ K+ + + +TY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 244 LILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDD 303
LI +CR + + M K G + V+ ++L++G C KR+ +A+ L +M E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 304 CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEAS 363
RP T+T +I GL + SEA+ + M RGC+PN+ TY V+++ LCK D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 364 ELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGF 423
LLN+M + +VV +N +ID CK ++ AL + M++ PN TY+ LI
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 424 CKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQ 483
C A LL++++E+ ++P L+T+N+LI +EG A K+ + + + PD
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 484 FTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLER 543
FTY+ ++ C R+++A+ +F+ + K V Y LI G+CK +++D L
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 544 MLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGD 603
M + ++ TY LI GL+ + A + ++M GV P + TY+IL++ + G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 604 FDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTL 663
+ A + D M +K D+Y YT I+ C GK+D+ DL ++ +G+ P+ VTY
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 664 LICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK-HLSN 705
+I L+ A+ +LK+M + G P+ TY LI+ HL +
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 588
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 217/418 (51%)
Query: 288 RVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYT 347
++D+A+ LF M + P++ + ++ + ++ + + +M ++TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 348 VLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSN 407
+LI+C C+ +++ A LL +M++ G P++VT ++L++GYC + A+ ++D M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 408 NCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSA 467
P+ T+ LI G A++L++ ++++ P L+TY ++ G C+ G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 468 YKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDG 527
+L+ + + + D ++ ID+LCK V++A LF +E KGI+ V Y++LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 528 YCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPT 587
C G+ DA LL M+ PN T+NALID +E K EA L + M K + P
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 588 VYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIV 647
++TY L+ D A ++ + MVS PDV TY I+ +C ++++ +L
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 648 KMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSN 705
+M+ G+V D+VTYT LI H G +A V K+M G P TY+ L+ L N
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 177/340 (52%), Gaps = 1/340 (0%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
++ +V Y++L+ L + + ++ +M++ + PN+ TFN +I+ K G EA
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
E +++ + PD FTY SL+ G+C + ++K ++F M K C + V+Y LI G
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
C++KRV++ +LFR M TYT +I GL G A + F +M + G P+
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
+ TY++L+D LC K+++A E+ + M + + ++ Y +I+G CK G ++ +
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
+ PN TYN +I G C ++ + A +LL ++ E P TYN+LI R+G
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEA 502
++ +++ + V D T + + L GR++++
Sbjct: 590 DKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 161/330 (48%), Gaps = 9/330 (2%)
Query: 410 SPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYK 469
S + Y E++ + A+ L +++ P+++ +N L+ + D
Sbjct: 47 SSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS 106
Query: 470 VLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYC 529
+ + +V +TY++ I+ C+R ++ A L + K G + V ++L++GYC
Sbjct: 107 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 530 KEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVY 589
+I DA +L+++M+ P++ T+ LI GL+ K EA+ LV++M + G +P +
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 590 TYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKM 649
TY +++ + K GD D A LL++M + ++ DV + I + C +D+A +L +M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 650 NREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI-------KH 702
+GI P+ VTY+ LI G A +L M + P+ T+ LI K
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 703 LSNKKV--DERKQQCDGILFGFKCLISQRC 730
+ +K+ D K+ D +F + L++ C
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%)
Query: 512 KGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQE 571
+ +G Y ++ + K+DDA L M+ LP+ +N L+ + + +K
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 572 ALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQ 631
+ L EKM ++ + +YTY ILI + A LL +M+ LG +P + T ++ +
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 632 AYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEP 691
YC ++ +A L+ +M G PD++T+T LI A ++ RM GC+P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 692 SHHTYAFLIKHLSNK 706
+ TY ++ L +
Sbjct: 224 NLVTYGVVVNGLCKR 238
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 300 bits (767), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/676 (28%), Positives = 318/676 (47%), Gaps = 63/676 (9%)
Query: 74 LSPSHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVF 133
++P + L L LN T+++ W + G++HS + Y L+ L N K ++++
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 134 LMLKSCSLDKEILFVLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLE 193
M + KE LF+ +R +++G G T LM EM+ VY
Sbjct: 136 QMKDEGIVFKESLFI-SIMRDYDKAG--------FPGQTTRLML--------EMRNVY-- 176
Query: 194 MLDNMVVPNIYTFNT----MINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYC 249
P ++N +++G C V Y ++ + P FT+ ++ +C
Sbjct: 177 ----SCEPTFKSYNVVLEILVSGNCH--KVAANVFY--DMLSRKIPPTLFTFGVVMKAFC 228
Query: 250 RNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVR 309
+++ + M K GC N V Y LIH L + RV+EAL L M C P
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 310 TYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRM 369
T+ VI GLC+ R +EA + N M RG P+ TY L++ LCK +VD A +L R+
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 370 LEK--------------------------------GLFPNVVTYNALIDGYCKEGLMEAA 397
+ G+ P+V TYN+LI GY KEGL+ A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 398 LQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYG 457
L++L M++ C PN +Y L+ GFCK + A ++LNE+ L P + +N LI
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 458 QCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAG 517
C+E + A ++ + G PD +T++ I LC+ ++ A L + +G+ A
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 518 EVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVE 577
V Y LI+ + + G+I +A L+ M+ + TYN+LI GL R +V +A L E
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 578 KMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIG 637
KM + G P+ + ILI + + G + A +MV G PD+ T+ + I C G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 638 KLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYA 697
++++ + K+ EGI PD+VT+ L+ G +Y A +L + G P+H T++
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWS 708
Query: 698 FLIKHLSNKKVDERKQ 713
L++ + ++ +R++
Sbjct: 709 ILLQSIIPQETLDRRR 724
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 299 bits (765), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 276/544 (50%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ +N LL ++K D + + +M + N+YT+N +IN C+ + A +
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
K+++ G P T +SL+ GYC K + + M + G R + +++T LIHGL
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+ EA+ L RM + C+P + TY VV+ GLC+ G A N+M A E +V +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+ID LCK VD+A L M KG+ PNVVTY++LI C G A Q+L M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
+PN T+N LI F K A L ++++++++ P + TYNSLI G C LD
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A ++ + PD TY+ I CK RVE+ LF + +G+ V YT LI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G +G D+A + ++M+SD P+ TY+ L+DGL K+++AL + + M K +K
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
+Y YT +IE + K G D L + G+KP+V TY I CS L EA L+
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 647 VKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
KM +G +PDS TY LI A+ G ++ ++++ M T + L +
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
Query: 707 KVDE 710
++D+
Sbjct: 549 RLDK 552
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/455 (34%), Positives = 243/455 (53%), Gaps = 5/455 (1%)
Query: 192 LEMLDNMV----VPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILG 247
+ ++D MV P+ TF T+I+G EA V ++VQ G P+ TY ++ G
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 248 YCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPT 307
C+ D++ F + M + V + +I LC+ + VD+AL+LF+ M RP
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 308 VRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLN 367
V TY+ +I LC GR S+A + ++M + PN+ T+ LID KE K EA +L +
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
M+++ + P++ TYN+LI+G+C ++ A Q+ + M S +C P+ TYN LI GFCK K
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
V L E+ + L +TY +LI G +G D+A KV + G+ PD TYS
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 488 VFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSD 547
+ +D LC G++E+A +FD ++K IK IYT +I+G CK GK+DD L +
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 548 DCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHA 607
PN TYN +I GL +R +QEA L++KM + G P TY LI L++GD +
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 608 HRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEA 642
L+ +M S D T + G+LD++
Sbjct: 520 AELIREMRSCRFVGDAST-IGLVANMLHDGRLDKS 553
Score = 275 bits (704), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 267/513 (52%), Gaps = 1/513 (0%)
Query: 194 MLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKD 253
M+ + +P+I+ FN +++ K+ K+ + G+S + +TY LI +CR
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 254 VEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTV 313
+ + M K G + V+ ++L++G C KR+ +A+ L +M E RP T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 314 VIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKG 373
+I GL + SEA+ + M RGC+PN+ TY V+++ LCK +D A LLN+M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 374 LFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAM 433
+ +VV +N +ID CK ++ AL + M++ PN TY+ LI C A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 434 SLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTL 493
LL++++E+ ++P L+T+N+LI +EG A K+ + + + PD FTY+ I+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 494 CKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNS 553
C R+++A+ +F+ + K Y LI G+CK +++D L M + ++
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 554 YTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQ 613
TY LI GL+ + A + ++M GV P + TY+IL++ + G + A + D
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 614 MVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGL 673
M +K D+Y YT I+ C GK+D+ DL ++ +G+ P+ VTY +I L
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 674 IYSAFDVLKRMFDAGCEPSHHTYAFLIK-HLSN 705
+ A+ +LK+M + G P TY LI+ HL +
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 166/339 (48%)
Query: 369 MLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKN 428
M++ P++ +N L+ K + + + + M+ S N TYN LI FC+R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 429 VHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSV 488
+ A++LL ++++ P+++T +SL+ G C + A ++ + E G PD T++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 489 FIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDD 548
I L + EA L D + ++G + V Y +++G CK G ID A +LL +M +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 549 CLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAH 608
+ +N +ID L + R V +AL L ++M G++P V TY+ LI + G + A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 609 RLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAY 668
+LL M+ + P++ T+ A I A+ GK EAE L M + I PD TY LI +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 669 AHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKK 707
+ A + + M C P TY LIK K
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 201/694 (28%), Positives = 323/694 (46%), Gaps = 51/694 (7%)
Query: 21 LNKYPFCKSSSIS----SLPLPLDPDPPDLPSQIFTILSTHPTTWQRHTSITKLIPLLSP 76
L YPF S +++ S L L P PS + S H LS
Sbjct: 7 LKFYPFSISQAVTLTHHSFSLNLTP-----PSSTISFASPHSAA-------------LSS 48
Query: 77 SHISSLFSLDLNP--QTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFL 134
+ + L SL P AL S+KP F Y E+I+
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALY----------------EEILLR 92
Query: 135 MLKSCSLDKEILFVLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEM 194
+ +S S D ++++ E ++ + L+ ++F L DE+ V M
Sbjct: 93 LGRSGSFDD--------MKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144
Query: 195 LDNM-VVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKD 253
+D + P+ + +N M+N ++ E+ +K+ G+ PD T+ LI CR
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 254 VEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTV 313
+ + MP G +E ++T ++ G E +D AL + +M E C + + V
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 314 VIFGLCRVGRKSEALEFFNEMSAR-GCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEK 372
++ G C+ GR +AL F EMS + G P+ +T+ L++ LCK V A E+++ ML++
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 373 GLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRA 432
G P+V TYN++I G CK G ++ A+++LD M + +CSPN TYN LI CK V A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 433 MSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDT 492
L L + + P + T+NSLI G C + A ++ + G PD+FTY++ ID+
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 493 LCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPN 552
LC +G+++EA + +E G + Y LIDG+CK K +A + + M N
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 553 SYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLD 612
S TYN LIDGL + R+V++A L+++M G KP YTY L+ + GD A ++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 613 QMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLG 672
M S G +PD+ TY I C G+++ A L+ + +GI Y +I
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 673 LIYSAFDVLKRMFDAG-CEPSHHTYAFLIKHLSN 705
A ++ + M + P +Y + + L N
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 237/454 (52%), Gaps = 3/454 (0%)
Query: 149 LDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLD-NMVVPNIYTFN 207
LD R+ E EF S N ++ K V++ EM + + P+ YTFN
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 208 TMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKK 267
T++NG CK G+V A + ++Q G PD +TY S+I G C+ +V++ V M +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 268 GCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEA 327
C N V+Y LI LC+ +V+EA +L R + P V T+ +I GLC A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 328 LEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDG 387
+E F EM ++GCEP+ TY +LID LC + K+DEA +L +M G +V+TYN LIDG
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 388 YCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPT 447
+CK A +I D M+ + S N+ TYN LI G CK + V A L+++++ + P
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 448 LITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFD 507
TYNSL+ CR G + A ++ + +G PD TY I LCK GRVE A L
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 508 SLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERML-SDDCLPNSYTYNALIDGLYR- 565
S++ KGI Y +I G ++ K +A +L ML ++ P++ +Y + GL
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG 659
Query: 566 ERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVL 599
++EA+ + ++ + G P + +L E +L
Sbjct: 660 GGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLL 693
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/597 (28%), Positives = 286/597 (47%), Gaps = 12/597 (2%)
Query: 123 NFTKASEKIVFLMLKSCSLDKEILFVLDFLRRVNESGSEFSL-KLSVKG---------YN 172
N T S I F S +L + +LD LR + + L L+ K Y
Sbjct: 28 NLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYE 87
Query: 173 TLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV-Q 231
+L++L + D+MK++ +M + TF +I + E V ++ +
Sbjct: 88 EILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE 147
Query: 232 AGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDE 291
GL PDT Y ++ ++ M G + + ++ LI LC A ++
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 292 ALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLID 351
A+ + M P +T+T V+ G G AL +M GC + + V++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 352 CLCKENKVDEASELLNRML-EKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCS 410
CKE +V++A + M + G FP+ T+N L++G CK G ++ A++I+D+M
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 411 PNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKV 470
P+ TYN +I G CK V A+ +L++++ ++ SP +TYN+LI C+E ++ A ++
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 471 LHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCK 530
++ G++PD T++ I LC A LF+ + KG + E Y LID C
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 531 EGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYT 590
+GK+D+A ++L++M C + TYN LIDG + K +EA + ++M GV T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 591 YTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMN 650
Y LI+ + K + A +L+DQM+ G KPD YTY + + +C G + +A D++ M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 651 REGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKK 707
G PD VTY LI G + A +L+ + G + H Y +I+ L K+
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 14/299 (4%)
Query: 148 VLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFN 207
L+ L+++ SG SV YNTL+ K + E + ++ EM + V N T+N
Sbjct: 454 ALNMLKQMELSGC----ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 208 TMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKK 267
T+I+G CK V +A + +++ G PD +TY SL+ +CR D++K + M
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 268 GCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEA 327
GC + V+Y LI GLC+A RV+ A L R + T Y VI GL R + +EA
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Query: 328 LEFFNEMSARG-CEPNVHTYTVLIDCLCKEN-KVDEASELLNRMLEKGLFPNVVTYNALI 385
+ F EM + P+ +Y ++ LC + EA + L +LEKG P + L
Sbjct: 630 INLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLA 689
Query: 386 DGYCKEGLMEAALQILDLMKSNNCSPNARTYNE---LICGFCKRKNVHRAMSLLNELLE 441
+G + E +++++++ AR E ++ G K + A++ L +L+
Sbjct: 690 EGLLTLSMEETLVKLVNMVMQ-----KARFSEEEVSMVKGLLKIRKFQDALATLGGVLD 743
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 296 bits (759), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 262/494 (53%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ +N LL ++K D + + +M + N+YT+N +IN C+ + A +
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
K+++ G P T +SL+ GYC K + + M + G R + +++T LIHGL
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+ EA+ L RM + C+P + TY VV+ GLC+ G A N+M A E NV Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+ +ID LCK D+A L M KG+ PNV+TY++LI C A ++L M
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
+PN T+N LI F K + A L +E++++++ P + TY+SLI G C LD
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A + L+ P+ TY+ I+ CK R++E LF + ++G+ V YT LI
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G+ + D+A + ++M+SD PN TYN L+DGL + K+++A+++ E + + ++P
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
T+YTY I+IE + K G + L + G+KPDV Y I +C G +EA+ L
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 647 VKMNREGIVPDSVT 660
KM +G +PDS T
Sbjct: 564 RKMREDGPLPDSGT 577
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 266/512 (51%)
Query: 184 VDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTS 243
+D+ ++ M+ + +P+I+ FN +++ K+ K+ + G+S + +TY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 244 LILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDD 303
LI +CR + + M K G + V+ ++L++G C KR+ +A+ L +M E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 304 CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEAS 363
RP T+T +I GL + SEA+ + M RGC+PN+ TY V+++ LCK +D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 364 ELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGF 423
LLN+M + NVV Y+ +ID CK + AL + M++ PN TY+ LI
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 424 CKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQ 483
C + A LL++++E+ ++P ++T+N+LI +EG L A K+ + + + PD
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 484 FTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLER 543
FTYS I+ C R++EA+ +F+ + K V Y LI+G+CK +ID+ L
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 544 MLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGD 603
M + N+ TY LI G ++ R A ++ ++M GV P + TY L++ + K G
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 604 FDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTL 663
+ A + + + ++P +YTY I+ C GK+++ DL ++ +G+ PD + Y
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 664 LICAYAHLGLIYSAFDVLKRMFDAGCEPSHHT 695
+I + GL A + ++M + G P T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 247/490 (50%), Gaps = 6/490 (1%)
Query: 236 PDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDL 295
P F + L+ + K + + M + G N +Y LI+ C ++ AL L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 296 FRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCK 355
+M + P++ T + ++ G C R S+A+ ++M G P+ T+T LI L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 356 ENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNART 415
NK EA L++RM+++G PN+VTY +++G CK G ++ A +L+ M++ N
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 416 YNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLIN 475
Y+ +I CK ++ A++L E+ + + P +ITY+SLI C A ++L +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 476 ESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKID 535
E + P+ T++ ID K G++ EA+ L+D + K+ I Y++LI+G+C ++D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 536 DAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILI 595
+A + E M+S DC PN TYN LI+G + +++ E + L +M++ G+ TYT LI
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 596 EEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIV 655
+ D D+A + QMVS G+ P++ TY + C GKL++A + + R +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 656 PDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDE----- 710
P TY ++I G + +D+ + G +P Y +I K + E
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 711 -RKQQCDGIL 719
RK + DG L
Sbjct: 563 FRKMREDGPL 572
Score = 249 bits (636), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 255/525 (48%), Gaps = 59/525 (11%)
Query: 101 QKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFLRRVNESGS 160
Q+ G H++ +Y+ L+N F RR S
Sbjct: 112 QRLGISHNLYTYNILINC--------------------------------FCRR-----S 134
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
+ SL L++ G +M ++ E P+I T ++++NG C +
Sbjct: 135 QISLALALLG---------------KMMKLGYE-------PSIVTLSSLLNGYCHGKRIS 172
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
+A V ++V+ G PDT T+T+LI G + + + M ++GC+ N V+Y ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
+GLC+ +D A +L +M V Y+ VI LC+ + +AL F EM +G
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
PNV TY+ LI CLC + +AS LL+ M+E+ + PNVVT+NALID + KEG + A ++
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCR 460
D M + P+ TY+ LI GFC + A + ++ ++ P ++TYN+LI G C+
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 461 EGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVI 520
+D ++ +++ GLV + TY+ I + + AQ++F + G+ +
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 521 YTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMT 580
Y L+DG CK GK++ A + E + P YTYN +I+G+ + KV++ L ++
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 581 KMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYT 625
GVKP V Y +I ++G + A L +M G PD T
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 228/436 (52%), Gaps = 1/436 (0%)
Query: 276 YTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMS 335
Y ++ + ++D+A+ LF M + P++ + ++ + ++ + + +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 336 ARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLME 395
G N++TY +LI+C C+ +++ A LL +M++ G P++VT ++L++GYC +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 396 AALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLI 455
A+ ++D M P+ T+ LI G A++L++ ++++ P L+TY ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 456 YGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIK 515
G C+ G +D A+ +L+ + + + + YS ID+LCK ++A LF +E KG++
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 516 AGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLL 575
+ Y++LI C + DA LL M+ PN T+NALID +E K+ EA L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 576 VEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCS 635
++M K + P ++TY+ LI D A + + M+S P+V TY I +C
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 636 IGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHT 695
++DE +L +M++ G+V ++VTYT LI + +A V K+M G P+ T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 696 YAFLIKHL-SNKKVDE 710
Y L+ L N K+++
Sbjct: 473 YNTLLDGLCKNGKLEK 488
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 159/330 (48%), Gaps = 9/330 (2%)
Query: 410 SPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYK 469
S + Y E++ + A+ L +++ P++ +N L+ + D
Sbjct: 47 SSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS 106
Query: 470 VLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYC 529
+ + G+ + +TY++ I+ C+R ++ A L + K G + V ++L++GYC
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 530 KEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVY 589
+I DA +L+++M+ P++ T+ LI GL+ K EA+ LV++M + G +P +
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 590 TYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKM 649
TY +++ + K GD D A LL++M + ++ +V Y+ I + C D+A +L +M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 650 NREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL------ 703
+G+ P+ +TY+ LI + A +L M + P+ T+ LI
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 704 --SNKKVDER-KQQCDGILFGFKCLISQRC 730
+ K DE K+ D +F + LI+ C
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%)
Query: 512 KGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQE 571
+ +G Y ++ K+DDA L M+ LP+ + +N L+ + + +K
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 572 ALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQ 631
+ L EKM ++G+ +YTY ILI + A LL +M+ LG +P + T ++ +
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 632 AYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEP 691
YC ++ +A L+ +M G PD++T+T LI A ++ RM GC+P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 692 SHHTYAFLIKHLSNK 706
+ TY ++ L +
Sbjct: 224 NLVTYGVVVNGLCKR 238
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 296 bits (758), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 281/544 (51%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ ++ LL ++K + D + + +M + + N+YT++ +IN C+ + A +
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
+K+++ G PD T SL+ G+C + + M + G + + ++ LIHGL
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
R EA+ L RM C+P + TY +V+ GLC+ G AL +M EP V Y
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+ID LC V++A L M KG+ PNVVTYN+LI C G A ++L M
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
+PN T++ LI F K + A L +E++++++ P + TY+SLI G C LD
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A + L+ P+ TY+ I CK RV+E LF + ++G+ V YT LI
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G+ + + D+A + ++M+SD LP+ TY+ L+DGL KV+ AL++ E + + ++P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
+YTY I+IE + K G + L + G+KP+V TYT + +C G +EA+ L
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 647 VKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
+M EG +PDS TY LI A+ G ++ ++++ M T + L +
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
Query: 707 KVDE 710
++D+
Sbjct: 620 RLDK 623
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 243/471 (51%), Gaps = 1/471 (0%)
Query: 172 NTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQ 231
N+LL + + + + +M++ P+ +TFNT+I+G + EA V ++V
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 232 AGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDE 291
G PD TY ++ G C+ D++ + M + V Y +I LC K V++
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 292 ALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLID 351
AL+LF M RP V TY +I LC GR S+A ++M R PNV T++ LID
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 352 CLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSP 411
KE K+ EA +L + M+++ + P++ TY++LI+G+C ++ A + +LM S +C P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 412 NARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVL 471
N TYN LI GFCK K V M L E+ ++ L +TY +LI+G + D+A V
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 472 HLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKE 531
+ G++PD TYS+ +D LC G+VE A V+F+ L++ ++ Y +I+G CK
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 532 GKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTY 591
GK++D L + PN TY ++ G R+ +EA L +M + G P TY
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 592 TILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEA 642
LI L++GD + L+ +M S D T + G+LD++
Sbjct: 575 NTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVTNMLHDGRLDKS 624
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 221/418 (52%)
Query: 288 RVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYT 347
++D+A++LF M + P++ ++ ++ + ++ + + +M G N++TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 348 VLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSN 407
+LI+C C+ +++ A +L +M++ G P++VT N+L++G+C + A+ ++ M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 408 NCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSA 467
P++ T+N LI G + A++L++ ++ + P L+TY ++ G C+ G +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 468 YKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDG 527
+L + + + P Y+ ID LC V +A LF ++ KGI+ V Y +LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 528 YCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPT 587
C G+ DA LL M+ PN T++ALID +E K+ EA L ++M K + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 588 VYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIV 647
++TY+ LI D A + + M+S P+V TY I+ +C ++DE +L
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 648 KMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSN 705
+M++ G+V ++VTYT LI + +A V K+M G P TY+ L+ L N
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 181/354 (51%), Gaps = 1/354 (0%)
Query: 358 KVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYN 417
K+D+A L M++ FP++V ++ L+ K + + + + M++ S N TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 418 ELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINES 477
LI FC+R + A+++L ++++ P ++T NSL+ G C + A ++ + E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 478 GLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDA 537
G PD FT++ I L + R EA L D + KG + V Y +++G CK G ID A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 538 HSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEE 597
SLL++M P YN +ID L + V +AL L +M G++P V TY LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 598 VLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPD 657
+ G + A RLL M+ + P+V T++A I A+ GKL EAE L +M + I PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 658 SVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL-SNKKVDE 710
TY+ LI + + A + + M C P+ TY LIK K+VDE
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%)
Query: 442 QNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEE 501
++ S Y + + + LD A + + +S P +S + + K + +
Sbjct: 40 RDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL 99
Query: 502 AQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALID 561
L + ++ GI Y+ LI+ +C+ ++ A ++L +M+ P+ T N+L++
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159
Query: 562 GLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKP 621
G ++ +A+ LV +M +MG +P +T+ LI + + A L+D+MV G +P
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP 219
Query: 622 DVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVL 681
D+ TY + C G +D A L+ KM + I P V Y +I A + + A ++
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 682 KRMFDAGCEPSHHTYAFLIKHLSN 705
M + G P+ TY LI+ L N
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCN 303
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 245/442 (55%), Gaps = 1/442 (0%)
Query: 201 PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRV 260
P+ TFNT+I G G V EA + V ++V+ G PD TY S++ G CR+ D +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 261 FMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCR 320
M ++ + + +Y+ +I LC +D A+ LF+ M + +V TY ++ GLC+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 321 VGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVT 380
G+ ++ +M +R PNV T+ VL+D KE K+ EA+EL M+ +G+ PN++T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 381 YNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELL 440
YN L+DGYC + + A +LDLM N CSP+ T+ LI G+C K V M + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 441 EQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVE 500
++ L +TY+ L+ G C+ G + A ++ + G++PD TY + +D LC G++E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 501 EAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALI 560
+A +F+ L+K + G V+YT +I+G CK GK++DA +L + PN TY +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 561 DGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLK 620
GL ++ + EA +L+ KM + G P TY LI L++GD + +L+++M S G
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 621 PDVYTYTAFIQAYCSIGKLDEA 642
D + I S G+LD++
Sbjct: 576 ADASSIKMVIDMLLS-GELDKS 596
Score = 271 bits (694), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 253/514 (49%), Gaps = 35/514 (6%)
Query: 197 NMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEK 256
N + NIYT N MIN C+ A + K+++ G PDT T+ +LI
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI----------- 165
Query: 257 GFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIF 316
GL +V EA+ L RM E+ C+P V TY ++
Sbjct: 166 ------------------------KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 317 GLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFP 376
G+CR G S AL+ +M R + +V TY+ +ID LC++ +D A L M KG+
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 377 NVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLL 436
+VVTYN+L+ G CK G +L M S PN T+N L+ F K + A L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 437 NELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKR 496
E++ + +SP +ITYN+L+ G C + L A +L L+ + PD T++ I C
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 497 GRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTY 556
RV++ +F ++ K+G+ A V Y+ L+ G+C+ GKI A L + M+S LP+ TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 557 NALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVS 616
L+DGL K+++AL + E + K + + YT +IE + K G + A L +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 617 LGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYS 676
G+KP+V TYT I C G L EA L+ KM +G P+ TY LI A+ G + +
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 677 AFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDE 710
+ +++ M G + +I L + ++D+
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDMLLSGELDK 595
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%)
Query: 184 VDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTS 243
VD+ +V+ + +V N T++ ++ G C+ G + AE ++V G+ PD TY
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 244 LILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDD 303
L+ G C N +EK +F + K V YT +I G+C+ +V++A +LF +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 304 CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEAS 363
+P V TYTV+I GLC+ G SEA +M G PN TY LI ++ + ++
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 364 ELLNRMLEKGLFPNVVTYNALID 386
+L+ M G + + +ID
Sbjct: 564 KLIEEMKSCGFSADASSIKMVID 586
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 302/598 (50%), Gaps = 8/598 (1%)
Query: 61 WQRHTSITKLIPLLSPSHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLI 120
W R + L L H++ + S DL +L S+W ++P + +S+ +LL+
Sbjct: 110 WARSRRDSNLESLCIVIHLA-VASKDLKVAQSLISSFW--ERPKL-NVTDSFVQFFDLLV 165
Query: 121 RNNFTKASEKIVFLMLKSCSLDKEILFVLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSK 180
S+ VF + +D +L RRV E + L LSV N L +LSK
Sbjct: 166 YTYKDWGSDPRVFDVFFQVLVD---FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK 222
Query: 181 -FHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTF 239
+ V+ E + V N+ ++N +I+ C++G + EA + + G +PD
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 240 TYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRM 299
+Y++++ GYCR +++K +++ +M +KG + N Y ++I LC ++ EA + F M
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 300 GEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKV 359
P YT +I G C+ G A +FF EM +R P+V TYT +I C+ +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 360 DEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNEL 419
EA +L + M KGL P+ VT+ LI+GYCK G M+ A ++ + M CSPN TY L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 420 ICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGL 479
I G CK ++ A LL+E+ + L P + TYNS++ G C+ G+++ A K++ +GL
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 480 VPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHS 539
D TY+ +D CK G +++AQ + + KG++ V + L++G+C G ++D
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 540 LLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVL 599
LL ML+ PN+ T+N+L+ ++ A + + M GV P TY L++
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 600 KEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPD 657
K + A L +M G V TY+ I+ + K EA ++ +M REG+ D
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 207/387 (53%), Gaps = 4/387 (1%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
Y TL+ K + + + EM + P++ T+ +I+G C++G++ EA ++
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
GL PD+ T+T LI GYC+ ++ FRV M + GC N V+YT LI GLC+ +D
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLI 350
A +L M + +P + TY ++ GLC+ G EA++ E A G + TYT L+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 351 DCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCS 410
D CK ++D+A E+L ML KGL P +VT+N L++G+C G++E ++L+ M + +
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 411 PNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKV 470
PNA T+N L+ +C R N+ A ++ ++ + + P TY +L+ G C+ ++ A+ +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 471 LHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCK 530
+ G TYSV I KR + EA+ +FD + ++G+ A + I+ D K
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Query: 531 EGK----IDDAHSLLERMLSDDCLPNS 553
+ +D ++E L D+ L +
Sbjct: 714 GKRPDTIVDPIDEIIENYLVDEQLRGA 740
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 214/420 (50%)
Query: 149 LDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNT 208
LD + ++ E LK + Y +++ L + + E + + EM+ ++P+ + T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 209 MINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKG 268
+I+G CK G++ A + ++ ++PD TYT++I G+C+ D+ + ++F M KG
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 269 CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEAL 328
+ V++T LI+G C+A + +A + M + C P V TYT +I GLC+ G A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 329 EFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGY 388
E +EM G +PN+ TY +++ LCK ++EA +L+ GL + VTY L+D Y
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 389 CKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTL 448
CK G M+ A +IL M P T+N L+ GFC + LLN +L + ++P
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 449 ITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDS 508
T+NSL+ C +L +A + + G+ PD TY + CK ++EA LF
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 509 LEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERK 568
++ KG Y+ LI G+ K K +A + ++M + + ++ D Y+ ++
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 293 bits (749), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 269/514 (52%)
Query: 197 NMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEK 256
N + ++YT MIN C+ + A + + + G PDT T+++L+ G+C V +
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 257 GFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIF 316
+ M + R + V+ + LI+GLC RV EAL L RM E +P TY V+
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 317 GLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFP 376
LC+ G + AL+ F +M R + +V Y+++ID LCK+ D+A L N M KG+
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 377 NVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLL 436
+VVTY++LI G C +G + ++L M N P+ T++ LI F K + A L
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 437 NELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKR 496
NE++ + ++P ITYNSLI G C+E L A ++ L+ G PD TYS+ I++ CK
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 497 GRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTY 556
RV++ LF + KG+ + Y L+ G+C+ GK++ A L + M+S P+ TY
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 557 NALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVS 616
L+DGL ++ +AL + EKM K + + Y I+I + D A L +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 617 LGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYS 676
G+KPDV TY I C G L EA+ L KM +G PD TY +LI A+ + S
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 677 AFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDE 710
+ ++++ M G T +I LS++++D+
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDK 612
Score = 281 bits (720), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 258/481 (53%)
Query: 201 PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRV 260
P+ TF+T++NG C G V EA V ++V+ PD T ++LI G C V + +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 261 FMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCR 320
M + G + +EV+Y +++ LC++ ALDLFR+M E + + +V Y++VI LC+
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 321 VGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVT 380
G +AL FNEM +G + +V TY+ LI LC + K D+ +++L M+ + + P+VVT
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 381 YNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELL 440
++ALID + KEG + A ++ + M + +P+ TYN LI GFCK +H A + + ++
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 441 EQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVE 500
+ P ++TY+ LI C+ +D ++ I+ GL+P+ TY+ + C+ G++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 501 EAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALI 560
A+ LF + +G+ V Y L+DG C G+++ A + E+M YN +I
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 561 DGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLK 620
G+ KV +A L ++ GVKP V TY ++I + K+G A L +M G
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 621 PDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDV 680
PD +TY I+A+ L + +LI +M G DS T ++I + L S D+
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDM 617
Query: 681 L 681
L
Sbjct: 618 L 618
Score = 279 bits (713), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 164/491 (33%), Positives = 250/491 (50%), Gaps = 10/491 (2%)
Query: 143 KEILFVLDFLRRVNESGSE---FSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMV 199
K++LF L R + G E + V G+ LVD M +EM
Sbjct: 119 KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM----VEMKQR-- 172
Query: 200 VPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFR 259
P++ T +T+ING C G V EA + + ++V+ G PD TY ++ C++ +
Sbjct: 173 -PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 260 VFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLC 319
+F M ++ + + V Y+ +I LC+ D+AL LF M + V TY+ +I GLC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 320 RVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVV 379
G+ + + EM R P+V T++ LID KE K+ EA EL N M+ +G+ P+ +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 380 TYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNEL 439
TYN+LIDG+CKE + A Q+ DLM S C P+ TY+ LI +CK K V M L E+
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 440 LEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRV 499
+ L P ITYN+L+ G C+ G L++A ++ + G+ P TY + +D LC G +
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 500 EEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNAL 559
+A +F+ ++K + G IY +I G C K+DDA SL + P+ TYN +
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 560 IDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGL 619
I GL ++ + EA +L KM + G P +TY ILI L + L+++M G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Query: 620 KPDVYTYTAFI 630
D T I
Sbjct: 592 SADSSTIKMVI 602
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 230/425 (54%), Gaps = 1/425 (0%)
Query: 279 LIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARG 338
L +G+ + K V++A+DLF M + PT + + + R + L F M G
Sbjct: 42 LRNGIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 339 CEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAAL 398
E +++T T++I+C C++ K+ A +L R + G P+ +T++ L++G+C EG + A+
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 399 QILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQ 458
++D M P+ T + LI G C + V A+ L++ ++E P +TY ++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 459 CREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGE 518
C+ G+ A + + E + YS+ ID+LCK G ++A LF+ +E KGIKA
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 519 VIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEK 578
V Y++LI G C +GK DD +L M+ + +P+ T++ALID +E K+ EA L +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 579 MTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGK 638
M G+ P TY LI+ KE A+++ D MVS G +PD+ TY+ I +YC +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 639 LDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAF 698
+D+ L +++ +G++P+++TY L+ + G + +A ++ + M G PS TY
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 699 LIKHL 703
L+ L
Sbjct: 461 LLDGL 465
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 239/498 (47%), Gaps = 48/498 (9%)
Query: 244 LILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDD 303
L+LG+C+ M G + + T +I+ C K++ A + R +
Sbjct: 88 LVLGFCKG------------MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 304 CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEAS 363
P T++ ++ G C GR SEA+ + M P++ T + LI+ LC + +V EA
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 364 ELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGF 423
L++RM+E G P+ VTY +++ CK G AL + M+ N + Y+ +I
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 424 CKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQ 483
CK + A+SL NE+ + + ++TY+SLI G C +G D K+L + ++PD
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 484 FTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLER 543
T+S ID K G++ EA+ L++ + +GI + Y +LIDG+CKE + +A+ + +
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 544 MLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGD 603
M+S C P+ TY+ LI+ + ++V + + L +++ G+ P TY L+ + G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 604 FDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNR------------ 651
+ A L +MVS G+ P V TY + C G+L++A ++ KM +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 652 -----------------------EGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAG 688
+G+ PD VTY ++I G + A + ++M + G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 689 CEPSHHTYAFLIK-HLSN 705
C P TY LI+ HL
Sbjct: 556 CTPDDFTYNILIRAHLGG 573
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 176/334 (52%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
+K V Y++L+ L D+ ++ EM+ ++P++ TF+ +I+ K G + EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
+ ++++ G++PDT TY SLI G+C+ + + ++F +M KGC + V+Y+ LI+
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
C+AKRVD+ + LFR + P TY ++ G C+ G+ + A E F EM +RG P+
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
V TY +L+D LC ++++A E+ +M + + + YN +I G C ++ A +
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
+ P+ TYN +I G CK+ ++ A L ++ E +P TYN LI
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKR 496
L S+ +++ + G D T + ID L R
Sbjct: 575 GLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 280/544 (51%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ +N LL ++K + D + + M + + ++Y++N +IN C+ + A +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
K+++ G PD T +SL+ GYC K + + + M + N V++ LIHGL
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+ EA+ L RM C+P + TY V+ GLC+ G AL +M E +V Y
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
T +ID LC V++A L M KG+ PNVVTYN+LI C G A ++L M
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
+PN T++ LI F K + A L +E++++++ P + TY+SLI G C LD
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A + L+ P+ TY+ I CK RVEE LF + ++G+ V Y LI
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G + G D A + ++M+SD P+ TY+ L+DGL + K+++AL++ E + K ++P
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
+YTY I+IE + K G + L + G+KP+V YT I +C G +EA+ L
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 647 VKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
+M +G +P+S TY LI A G ++ +++K M G T + +I L +
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Query: 707 KVDE 710
++++
Sbjct: 619 RLEK 622
Score = 219 bits (557), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 239/508 (47%), Gaps = 76/508 (14%)
Query: 288 RVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYT 347
++D+A+DLF M + P++ + ++ + ++ + + M ++++Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 348 VLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCK----------------- 390
+LI+C C+ +++ A +L +M++ G P++VT ++L++GYC
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 391 -------------EGLM-----EAALQILDLMKSNNCSPNARTYNELICGFCKR------ 426
GL A+ ++D M + C P+ TY ++ G CKR
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 427 -----------------------------KNVHRAMSLLNELLEQNLSPTLITYNSLIYG 457
KNV+ A++L E+ + + P ++TYNSLI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 458 QCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAG 517
C G A ++L + E + P+ T+S ID K G++ EA+ L+D + K+ I
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 518 EVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVE 577
Y++LI+G+C ++D+A + E M+S DC PN TYN LI G + ++V+E + L
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 578 KMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIG 637
+M++ G+ TY LI+ + + GD D A ++ +MVS G+ PD+ TY+ + C G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 638 KLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYA 697
KL++A + + + + PD TY ++I G + +D+ + G +P+ Y
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 698 FLIKHLSNKKVDE------RKQQCDGIL 719
+I K + E R+ + DG L
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTL 567
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 185/340 (54%), Gaps = 1/340 (0%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
++ +V YN+L+ L + + R+ +M++ + PN+ TF+ +I+ K G + EA
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
E ++++ + PD FTY+SLI G+C + +++ +F +M K C N V+Y LI G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
C+AKRV+E ++LFR M + TY +I GL + G A + F +M + G P+
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
+ TY++L+D LCK K+++A + + + + P++ TYN +I+G CK G +E +
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
+ PN Y +I GFC++ A +L E+ E P TYN+LI + R+G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEA 502
++ +++ + G V D T S+ I+ L GR+E++
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 156/283 (55%), Gaps = 1/283 (0%)
Query: 186 EMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLI 245
E +++Y EM+ + P+I+T++++ING C + EA+ ++ P+ TY +LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 246 LGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCR 305
G+C+ K VE+G +F M ++G N V+Y LI GL +A D A +F++M D
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 306 PTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASEL 365
P + TY++++ GLC+ G+ +AL F + EP+++TY ++I+ +CK KV++ +L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 366 LNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCK 425
+ KG+ PNV+ Y +I G+C++GL E A + MK + PN+ TYN LI +
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 426 RKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAY 468
+ + L+ E+ T S++ +G L+ +Y
Sbjct: 583 DGDKAASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSY 624
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 13/291 (4%)
Query: 108 SVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFLR------RVNESGSE 161
+V ++S+L++ ++ +EK+ M+K S+D +I + R++E+
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 162 FSLKLS------VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCK 215
F L +S V YNTL+ K V+E ++ EM +V N T+NT+I G +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 216 VGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVS 275
G+ A+ K+V G+ PD TY+ L+ G C+ +EK VF + K + +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 276 YTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMS 335
Y +I G+C+A +V++ DLF + +P V YT +I G CR G K EA F EM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 336 ARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALID 386
G PN TY LI ++ ++EL+ M G + T + +I+
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 33.1 bits (74), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 594 LIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREG 653
L VL + D A L +MV P + + + A + K D L +M
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 654 IVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK-HLSNKKVDE 710
I D +Y +LI + + A VL +M G EP T + L+ + K++ E
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 253/463 (54%), Gaps = 1/463 (0%)
Query: 244 LILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKR-VDEALDLFRRMGED 302
++ Y R ++K + + G +SY ++ +KR + A ++F+ M E
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 303 DCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEA 362
P V TY ++I G C G AL F++M +GC PNV TY LID CK K+D+
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 363 SELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICG 422
+LL M KGL PN+++YN +I+G C+EG M+ +L M S + TYN LI G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 423 FCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPD 482
+CK N H+A+ + E+L L+P++ITY SLI+ C+ G+++ A + L + GL P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 483 QFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLE 542
+ TY+ +D ++G + EA + + G V Y ALI+G+C GK++DA ++LE
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 543 RMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEG 602
M P+ +Y+ ++ G R V EAL + +M + G+KP TY+ LI+ ++
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 603 DFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYT 662
A L ++M+ +GL PD +TYTA I AYC G L++A L +M +G++PD VTY+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 663 LLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSN 705
+LI A +L ++F PS TY LI++ SN
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 289 bits (739), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 282/557 (50%), Gaps = 17/557 (3%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVG-NVGEAELYVSKI 229
++ ++ S+ L+D+ + + +P + ++N +++ + N+ AE ++
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 230 VQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRV 289
+++ +SP+ FTY LI G+C +++ +F M KGC N V+Y LI G C+ +++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 290 DEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVL 349
D+ L R M P + +Y VVI GLCR GR E EM+ RG + TY L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 350 IDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNC 409
I CKE +A + ML GL P+V+TY +LI CK G M A++ LD M+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 410 SPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYK 469
PN RTY L+ GF ++ ++ A +L E+ + SP+++TYN+LI G C G ++ A
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 470 VLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYC 529
VL + E GL PD +YS + C+ V+EA + + +KGIK + Y++LI G+C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 530 KEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVY 589
++ + +A L E ML P+ +TY ALI+ E +++AL L +M + GV P V
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 590 TYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTY---------------TAFIQAYC 634
TY++LI + K+ A RLL ++ P TY + I+ +C
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 635 SIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHH 694
G + EA+ + M + PD Y ++I + G I A+ + K M +G
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV 676
Query: 695 TYAFLIKHLSNK-KVDE 710
T L+K L + KV+E
Sbjct: 677 TVIALVKALHKEGKVNE 693
Score = 285 bits (729), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 277/535 (51%), Gaps = 16/535 (2%)
Query: 188 KRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILG 247
+ V+ EML++ V PN++T+N +I G C GN+ A K+ G P+ TY +LI G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 248 YCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPT 307
YC+ + ++ GF++ M KG N +SY +I+GLC R+ E + M
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 308 VRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLN 367
TY +I G C+ G +AL EM G P+V TYT LI +CK ++ A E L+
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
+M +GL PN TY L+DG+ ++G M A ++L M N SP+ TYN LI G C
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
+ A+++L ++ E+ LSP +++Y++++ G CR +D A +V + E G+ PD TYS
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 488 VFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSD 547
I C++ R +EA L++ + + G+ E YTALI+ YC EG ++ A L M+
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 548 DCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIE----------- 596
LP+ TY+ LI+GL ++ + +EA L+ K+ P+ TY LIE
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 597 EVLK----EGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNRE 652
++K +G A ++ + M+ KPD Y I +C G + +A L +M +
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 653 GIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKK 707
G + +VT L+ A G + V+ + + CE S A ++ +++++
Sbjct: 670 GFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRS-CELSEAEQAKVLVEINHRE 723
Score = 236 bits (601), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 230/469 (49%), Gaps = 41/469 (8%)
Query: 286 AKRVDE--ALDLFRRMGE--DDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEP 341
AK +D+ A +F+ + E D C T + +V+ R+ +AL + A G P
Sbjct: 108 AKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP 167
Query: 342 NVHTYTVLIDCLCKENK-VDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
V +Y ++D + + + A + MLE + PNV TYN LI G+C G ++ AL +
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCR 460
D M++ C PN TYN LI G+CK + + LL + + L P LI+YN +I G CR
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 461 EGHLDSAYKVLHLINES-----------------------------------GLVPDQFT 485
EG + VL +N GL P T
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 486 YSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERML 545
Y+ I ++CK G + A D + +G+ E YT L+DG+ ++G +++A+ +L M
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 546 SDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFD 605
+ P+ TYNALI+G K+++A+ ++E M + G+ P V +Y+ ++ + D D
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 606 HAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLI 665
A R+ +MV G+KPD TY++ IQ +C + EA DL +M R G+ PD TYT LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 666 CAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDERKQQ 714
AY G + A + M + G P TY+ LI L NK+ R+ +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL-NKQSRTREAK 575
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 121/311 (38%), Gaps = 85/311 (27%)
Query: 155 VNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCC 214
V E E L V Y+T+L + + VDE RV EM++ + P+ T++++I G C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 215 KVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEV 274
+ EA ++++ GL PD FTYT+LI YC D+EK ++ M +KG + V
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 275 SYTNLIHGLC------EAKRV--------------------------------------- 289
+Y+ LI+GL EAKR+
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 290 -----DEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVH 344
EA +F M + +P Y ++I G CR G +A + EM G +
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV 676
Query: 345 TYTVLIDCLCKENKVDEAS-----------------------------------ELLNRM 369
T L+ L KE KV+E + ++L M
Sbjct: 677 TVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEM 736
Query: 370 LEKGLFPNVVT 380
+ G PN ++
Sbjct: 737 AKDGFLPNGIS 747
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 262/511 (51%), Gaps = 2/511 (0%)
Query: 194 MLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKD 253
ML N+Y N ++ G C+ G+A + ++ + L PD F+Y ++I G+C K+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 254 VEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTV 313
+EK + M GC + V++ LI C+A ++DEA+ + M + YT
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 314 VIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKG 373
+I G C G F+E+ RG P TY LI CK ++ EASE+ M+E+G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 374 LFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAM 433
+ PNV TY LIDG C G + ALQ+L+LM + PNA TYN +I CK V A+
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 434 SLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLI--NESGLVPDQFTYSVFID 491
++ + ++ P ITYN L+ G C +G LD A K+L+L+ + S PD +Y+ I
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 492 TLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLP 551
LCK R+ +A ++D L +K V L++ K G ++ A L +++ +
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Query: 552 NSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLL 611
NS TY A+IDG + + A L+ KM ++P+V+ Y L+ + KEG D A RL
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 612 DQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHL 671
++M PDV ++ I G + AE L+V M+R G+ PD TY+ LI + L
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 672 GLIYSAFDVLKRMFDAGCEPSHHTYAFLIKH 702
G + A +M D+G EP H ++K+
Sbjct: 613 GYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 267/497 (53%), Gaps = 2/497 (0%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
SL V YNT++ + +++ + EM + ++ T+ +I+ CK G + EA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
++ ++ GL D YTSLI G+C ++++G +F + ++G ++Y LI G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
C+ ++ EA ++F M E RP V TYT +I GLC VG+ EAL+ N M + EPN
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
TY ++I+ LCK+ V +A E++ M ++ P+ +TYN L+ G C +G ++ A ++L
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 403 LM--KSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCR 460
LM S+ P+ +YN LI G CK +H+A+ + + L+E+ + +T N L+ +
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471
Query: 461 EGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVI 520
G ++ A ++ I++S +V + TY+ ID CK G + A+ L + ++
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 521 YTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMT 580
Y L+ CKEG +D A L E M D+ P+ ++N +IDG + ++ A L+ M+
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 581 KMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLD 640
+ G+ P ++TY+ LI LK G D A D+MV G +PD + + ++ S G+ D
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 641 EAEDLIVKMNREGIVPD 657
+ +L+ K+ + IV D
Sbjct: 652 KLTELVKKLVDKDIVLD 668
Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 163/511 (31%), Positives = 245/511 (47%), Gaps = 41/511 (8%)
Query: 234 LSPDTF----TYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRV 289
L DTF + + L+ Y + + F V +M K+G N ++ L+ GLC
Sbjct: 99 LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLEC 158
Query: 290 DEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVL 349
+A+ L R M + P V +Y VI G C +ALE NEM GC ++ T+ +L
Sbjct: 159 GKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 350 IDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNC 409
ID CK K+DEA L M GL ++V Y +LI G+C G ++ + D +
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 410 SPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYK 469
SP A TYN LI GFCK + A + ++E+ + P + TY LI G C G A +
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 470 VLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYC 529
+L+L+ E P+ TY++ I+ LCK G V +A + + ++K+ + + Y L+ G C
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 530 KEGKIDDAHSLLERMLSDDCL--PNSYTYNALIDGLYRERKVQEAL----LLVEKM---- 579
+G +D+A LL ML D P+ +YNALI GL +E ++ +AL LLVEK+
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 580 ---TKMGVKPTVY------------------------TYTILIEEVLKEGDFDHAHRLLD 612
T + + T+ TYT +I+ K G + A LL
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 613 QMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLG 672
+M L+P V+ Y + + C G LD+A L +M R+ PD V++ ++I G
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 673 LIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL 703
I SA +L M AG P TY+ LI
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 176/356 (49%), Gaps = 2/356 (0%)
Query: 327 ALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALID 386
A F+ +M N + + L++C + K A +L ML++G NV +N L+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 387 GYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSP 446
G C+ A+ +L M+ N+ P+ +YN +I GFC+ K + +A+ L NE+ S
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 447 TLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLF 506
+L+T+ LI C+ G +D A L + GL D Y+ I C G ++ + LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 507 DSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRE 566
D + ++G + Y LI G+CK G++ +A + E M+ PN YTY LIDGL
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 567 RKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTY 626
K +EAL L+ M + +P TY I+I ++ K+G A +++ M +PD TY
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 627 TAFIQAYCSIGKLDEAEDLIVKMNREG--IVPDSVTYTLLICAYAHLGLIYSAFDV 680
+ C+ G LDEA L+ M ++ PD ++Y LI ++ A D+
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 182/414 (43%), Gaps = 37/414 (8%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
YNTL+ K + E ++ M++ V PN+YT+ +I+G C VG EA ++ ++
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
+ P+ TY +I C++ V + +M K+ R + ++Y L+ GLC +D
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 291 EALDLFRRMGEDDC--RPTVRTYTVVIFGLCR---------------------------- 320
EA L M +D P V +Y +I GLC+
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 321 -------VGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKG 373
G ++A+E + ++S N TYT +ID CK ++ A LL +M
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 374 LFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAM 433
L P+V YN L+ CKEG ++ A ++ + M+ +N P+ ++N +I G K ++ A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 434 SLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTL 493
SLL + LSP L TY+ LI + G+LD A + +SG PD +
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 494 CKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSD 547
+G ++ L L K I + + ++D C D L R+ D
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDD 698
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 157/339 (46%), Gaps = 35/339 (10%)
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
+MLE F N V+ + L++ Y + A +L LM + N +N L+ G C+
Sbjct: 97 KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL 156
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
+A+SLL E+ +L P + +YN++I G C L+ A ++ + + SG T+
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 488 VFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSD 547
+ ID CK G+++EA ++ G++A V+YT+LI G+C G++D +L + +L
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL-- 274
Query: 548 DCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHA 607
ER G P TY LI K G A
Sbjct: 275 ------------------ER---------------GDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 608 HRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICA 667
+ + M+ G++P+VYTYT I C +GK EA L+ M + P++VTY ++I
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 668 YAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
GL+ A ++++ M P + TY L+ L K
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 553 SYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLD 612
++ N L+ L R R + A KM + + + L+E ++ A +L
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 613 QMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLG 672
M+ G +VY + ++ C + +A L+ +M R ++PD +Y +I +
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 673 LIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK-KVDE 710
+ A ++ M +GC S T+ LI K+DE
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 279/544 (51%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ +N LL ++K + + + + +M + ++YT++ IN C+ + A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
+K+++ G PD T +SL+ GYC +K + + M + G + + ++T LIHGL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+ EA+ L +M + C+P + TY V+ GLC+ G AL +M E +V Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+ID LCK +D+A L M KG+ P+V TY++LI C G A ++L M
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
+PN T++ LI F K + A L +E++++++ P + TY+SLI G C LD
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A + L+ P+ TYS I CK RVEE LF + ++G+ V YT LI
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G+ + D+A + ++M+S PN TYN L+DGL + K+ +A+++ E + + ++P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
+YTY I+IE + K G + L + G+ P+V Y I +C G +EA+ L+
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 647 VKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
KM +G +P+S TY LI A G ++ +++K M G T + L +
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Query: 707 KVDE 710
++D+
Sbjct: 622 RLDK 625
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 280/528 (53%), Gaps = 6/528 (1%)
Query: 177 QLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVS---KIVQAG 233
+LS VD+ ++ +M+ + P+I FN +++ V + + EL +S ++ G
Sbjct: 57 RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSA---VAKMNKFELVISLGEQMQTLG 113
Query: 234 LSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEAL 293
+S D +TY+ I +CR + V M K G + V+ ++L++G C +KR+ +A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 294 DLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCL 353
L +M E +P T+T +I GL + SEA+ ++M RGC+P++ TY +++ L
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 354 CKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNA 413
CK +D A LL +M + + +VV YN +IDG CK M+ AL + M + P+
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 414 RTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHL 473
TY+ LI C A LL++++E+ ++P ++T+++LI +EG L A K+
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 474 INESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGK 533
+ + + PD FTYS I+ C R++EA+ +F+ + K V Y+ LI G+CK +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 534 IDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTI 593
+++ L M + N+ TY LI G ++ R A ++ ++M +GV P + TY I
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 594 LIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREG 653
L++ + K G A + + + ++PD+YTY I+ C GK+++ +L ++ +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 654 IVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK 701
+ P+ + Y +I + G A +LK+M + G P+ TY LI+
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 261/519 (50%), Gaps = 14/519 (2%)
Query: 101 QKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFL------RR 154
Q G H + +YS +N R + + ++ M+K + +I+ + L +R
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK-LGYEPDIVTLSSLLNGYCHSKR 168
Query: 155 VNESGS------EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNT 208
++++ + E K + TL+ L + E + +M+ P++ T+ T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 209 MINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKG 268
++NG CK G++ A + K+ + + D Y ++I G C+ K ++ +F M KG
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 269 CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEAL 328
R + +Y++LI LC R +A L M E P V T++ +I + G+ EA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 329 EFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGY 388
+ ++EM R +P++ TY+ LI+ C +++DEA + M+ K FPNVVTY+ LI G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 389 CKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTL 448
CK +E +++ M N TY LI GF + ++ A + +++ + P +
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 449 ITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDS 508
+TYN L+ G C+ G L A V + S + PD +TY++ I+ +CK G+VE+ LF +
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 509 LEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERK 568
L KG+ + Y +I G+C++G ++A SLL++M D LPNS TYN LI R+
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 569 VQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHA 607
+ + L+++M G T L+ +L +G D +
Sbjct: 589 REASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 626
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 224/421 (53%)
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
L + +VD+A+DLF M + P++ + ++ + ++ + + +M G +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
++TY++ I+C C+ +++ A +L +M++ G P++VT ++L++GYC + A+ ++D
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
M P+ T+ LI G A++L+++++++ P L+TY +++ G C+ G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYT 522
+D A +L + + + D Y+ ID LCK +++A LF ++ KGI+ Y+
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 523 ALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKM 582
+LI C G+ DA LL M+ PN T++ALID +E K+ EA L ++M K
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 583 GVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEA 642
+ P ++TY+ LI D A + + M+S P+V TY+ I+ +C +++E
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 643 EDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKH 702
+L +M++ G+V ++VTYT LI + +A V K+M G P+ TY L+
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 703 L 703
L
Sbjct: 478 L 478
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 186/354 (52%), Gaps = 1/354 (0%)
Query: 358 KVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYN 417
KVD+A +L M++ FP++V +N L+ K E + + + M++ S + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 418 ELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINES 477
I FC+R + A+++L ++++ P ++T +SL+ G C + A ++ + E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 478 GLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDA 537
G PD FT++ I L + EA L D + ++G + V Y +++G CK G ID A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 538 HSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEE 597
SLL++M + YN +IDGL + + + +AL L +M G++P V+TY+ LI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 598 VLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPD 657
+ G + A RLL M+ + P+V T++A I A+ GKL EAE L +M + I PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 658 SVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL-SNKKVDE 710
TY+ LI + + A + + M C P+ TY+ LIK K+V+E
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 282/561 (50%), Gaps = 43/561 (7%)
Query: 185 DEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAG---LSPDTFTY 241
++ + V+ E+L +IY N + + Y +++ +AG ++PD TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRY-NRMARAGADEVTPDLCTY 90
Query: 242 TSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDL-FRRMG 300
LI CR ++ GF + KKG R + +++T L+ GLC KR +A+D+ RRM
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 301 EDDCRPTVRTYTVVIFGLCRVGRKSEALEF------------------------------ 330
E C P V +Y +++ GLC R EALE
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 331 --------FNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYN 382
++EM RG P+V TY +I LCK +D+A E+LN M++ G+ P+ +TYN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 383 ALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQ 442
+++ GYC G + A+ L M+S+ P+ TY+ L+ CK A + + + ++
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 443 NLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEA 502
L P + TY +L+ G +G L + +L L+ +G+ PD + +S+ I K+G+V++A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 503 QVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDG 562
++F + ++G+ V Y A+I CK G+++DA E+M+ + P + YN+LI G
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 563 LYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPD 622
L K + A L+ +M G+ + +I+ KEG + +L + MV +G+KP+
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 623 VYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLK 682
V TY I YC GK+DEA L+ M G+ P++VTY+ LI Y + + A + K
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 683 RMFDAGCEPSHHTYAFLIKHL 703
M +G P TY +++ L
Sbjct: 571 EMESSGVSPDIITYNIILQGL 591
Score = 273 bits (697), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 294/608 (48%), Gaps = 43/608 (7%)
Query: 135 MLKSCSLDKEILFVLDF-LRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLE 193
+LK DK +D LRR+ E G +V YN LL L + E +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGC----IPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 194 MLDNM---VVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCR 250
M D+ P++ ++ T+ING K G+ +A +++ G+ PD TY S+I C+
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 251 NKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRT 310
+ ++K V M K G + ++Y +++HG C + + EA+ ++M D P V T
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 311 YTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY------------------------ 346
Y++++ LC+ GR EA + F+ M+ RG +P + TY
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 347 -----------TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLME 395
++LI K+ KVD+A + ++M ++GL PN VTY A+I CK G +E
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 396 AALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLI 455
A+ + M SP YN LI G C RA L+ E+L++ + I +NS+I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 456 YGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIK 515
C+EG + + K+ L+ G+ P+ TY+ I+ C G+++EA L + G+K
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 516 AGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLL 575
V Y+ LI+GYCK +++DA L + M S P+ TYN ++ GL++ R+ A L
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 576 VEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCS 635
++T+ G + + TY I++ + K D A ++ + + LK + T+ I A
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Query: 636 IGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHT 695
+G+ DEA+DL V + G+VP+ TY L+ GL+ + M D GC
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGM 723
Query: 696 YAFLIKHL 703
F+++ L
Sbjct: 724 LNFIVREL 731
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 154/320 (48%), Gaps = 11/320 (3%)
Query: 112 YSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILF--VLDFL---RRVNESGSEFSL-- 164
Y+SL++ L N + +E+++ ML I F ++D RV ES F L
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 165 ----KLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
K +V YNTL+ +DE ++ M+ + PN T++T+ING CK+ +
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
+A + ++ +G+SPD TY ++ G + + +++ + + G + +Y ++
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
HGLC+ K D+AL +F+ + D + RT+ ++I L +VGR EA + F S+ G
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
PN TY ++ + + + ++E +L M + G + N ++ + G + A
Sbjct: 684 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 743
Query: 401 LDLMKSNNCSPNARTYNELI 420
L ++ + S A T + I
Sbjct: 744 LSMIDEKHFSLEASTASLFI 763
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 245/429 (57%), Gaps = 4/429 (0%)
Query: 192 LEMLDNM-VVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCR 250
LE+L+ VP++ T+N MI+G CK G + A +S + + +SPD TY +++ C
Sbjct: 160 LEILEGSGAVPDVITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCD 216
Query: 251 NKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRT 310
+ +++ V M ++ C + ++YT LI C V A+ L M + C P V T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 311 YTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRML 370
Y V++ G+C+ GR EA++F N+M + GC+PNV T+ +++ +C + +A +LL ML
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 371 EKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVH 430
KG P+VVT+N LI+ C++GL+ A+ IL+ M + C PN+ +YN L+ GFCK K +
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 431 RAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFI 490
RA+ L ++ + P ++TYN+++ C++G ++ A ++L+ ++ G P TY+ I
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 491 DTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCL 550
D L K G+ +A L D + K +K + Y++L+ G +EGK+D+A
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 551 PNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRL 610
PN+ T+N+++ GL + R+ A+ + M G KP +YTILIE + EG A L
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 611 LDQMVSLGL 619
L+++ + GL
Sbjct: 577 LNELCNKGL 585
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/474 (30%), Positives = 254/474 (53%), Gaps = 3/474 (0%)
Query: 215 KVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEV 274
+ G + E ++ +V G PD T+LI G+CR K ++ ++ G + +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 275 SYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEM 334
+Y +I G C+A ++ AL + RM P V TY ++ LC G+ +A+E + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 335 SARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLM 394
R C P+V TYT+LI+ C+++ V A +LL+ M ++G P+VVTYN L++G CKEG +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 395 EAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSL 454
+ A++ L+ M S+ C PN T+N ++ C A LL ++L + SP+++T+N L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 455 IYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGI 514
I CR+G L A +L + + G P+ +Y+ + CK +++ A + + +G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 515 KAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALL 574
V Y ++ CK+GK++DA +L ++ S C P TYN +IDGL + K +A+
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 575 LVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYC 634
L+++M +KP TY+ L+ + +EG D A + + +G++P+ T+ + + C
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 635 SIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAG 688
+ D A D +V M G P+ +YT+LI A+ G+ A ++L + + G
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 252/471 (53%), Gaps = 7/471 (1%)
Query: 192 LEMLDNMV----VPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILG 247
+ L+NMV VP+I T+I G C++G +A + + +G PD TY +I G
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181
Query: 248 YCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPT 307
YC+ ++ V M + V+Y ++ LC++ ++ +A+++ RM + DC P
Sbjct: 182 YCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238
Query: 308 VRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLN 367
V TYT++I CR A++ +EM RGC P+V TY VL++ +CKE ++DEA + LN
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
M G PNV+T+N ++ C G A ++L M SP+ T+N LI C++
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
+ RA+ +L ++ + P ++YN L++G C+E +D A + L + G PD TY+
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 488 VFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSD 547
+ LCK G+VE+A + + L KG + Y +IDG K GK A LL+ M +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 548 DCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHA 607
D P++ TY++L+ GL RE KV EA+ + +MG++P T+ ++ + K D A
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 608 HRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDS 658
L M++ G KP+ +YT I+ G EA +L+ ++ +G++ S
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
Score = 268 bits (686), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 242/455 (53%), Gaps = 3/455 (0%)
Query: 250 RNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVR 309
R ++E+GF+ M G + + T LI G C + +A + + P V
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 310 TYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRM 369
TY V+I G C+ G + AL + MS P+V TY ++ LC K+ +A E+L+RM
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 370 LEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNV 429
L++ +P+V+TY LI+ C++ + A+++LD M+ C+P+ TYN L+ G CK +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 430 HRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVF 489
A+ LN++ P +IT+N ++ C G A K+L + G P T+++
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 490 IDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDC 549
I+ LC++G + A + + + + G + + Y L+ G+CKE K+D A LERM+S C
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 550 LPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHR 609
P+ TYN ++ L ++ KV++A+ ++ +++ G P + TY +I+ + K G A +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 610 LLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYA 669
LLD+M + LKPD TY++ + GK+DEA + R GI P++VT+ ++
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 670 HLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLS 704
A D L M + GC+P+ +Y LI+ L+
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 199/392 (50%)
Query: 162 FSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGE 221
S+ V YNT+L L + + V ML P++ T+ +I C+ VG
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 222 AELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIH 281
A + ++ G +PD TY L+ G C+ +++ + MP GC+ N +++ ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 282 GLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEP 341
+C R +A L M P+V T+ ++I LCR G A++ +M GC+P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 342 NVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQIL 401
N +Y L+ CKE K+D A E L RM+ +G +P++VTYN ++ CK+G +E A++IL
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 402 DLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCRE 461
+ + S CSP TYN +I G K +A+ LL+E+ ++L P ITY+SL+ G RE
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 462 GHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIY 521
G +D A K H G+ P+ T++ + LCK + + A + +G K E Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 522 TALIDGYCKEGKIDDAHSLLERMLSDDCLPNS 553
T LI+G EG +A LL + + + S
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 147/396 (37%), Positives = 233/396 (58%)
Query: 199 VVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGF 258
VV ++Y+F +I GCC+ G + ++ + ++ + G SP+ YT+LI G C+ ++EK
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 259 RVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGL 318
+F M K G NE +YT LI+GL + + +++ +M ED P + TY V+ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 319 CRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNV 378
C+ GR +A + F+EM RG N+ TY LI LC+E K++EA++++++M G+ PN+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 379 VTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNE 438
+TYN LIDG+C G + AL + +KS SP+ TYN L+ GFC++ + A ++ E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 439 LLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGR 498
+ E+ + P+ +TY LI R +++ A ++ + E GLVPD TYSV I C +G+
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 499 VEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNA 558
+ EA LF S+ +K + EVIY +I GYCKEG A LL+ M + PN +Y
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 559 LIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTIL 594
+I+ L +ERK +EA LVEKM G+ P+ +++
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 244/429 (56%), Gaps = 1/429 (0%)
Query: 193 EMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNK 252
EM+DN VP FN ++ + + + ++ ++ + D +++ LI G C
Sbjct: 119 EMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAG 177
Query: 253 DVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYT 312
++EK F + + + + G N V YT LI G C+ +++A DLF MG+ RTYT
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 313 VVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEK 372
V+I GL + G K + E + +M G PN++TY +++ LCK+ + +A ++ + M E+
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 373 GLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRA 432
G+ N+VTYN LI G C+E + A +++D MKS+ +PN TYN LI GFC + +A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 433 MSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDT 492
+SL +L + LSP+L+TYN L+ G CR+G A K++ + E G+ P + TY++ IDT
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 493 LCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPN 552
+ +E+A L S+E+ G+ Y+ LI G+C +G++++A L + M+ +C PN
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 553 SYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLD 612
YN +I G +E AL L+++M + + P V +Y +IE + KE A RL++
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
Query: 613 QMVSLGLKP 621
+M+ G+ P
Sbjct: 538 KMIDSGIDP 546
Score = 225 bits (574), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 200/390 (51%)
Query: 275 SYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEM 334
S+ LI G CEA ++++ DL + E P V YT +I G C+ G +A + F EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 335 SARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLM 394
G N TYTVLI+ L K + E+ +M E G+FPN+ TYN +++ CK+G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 395 EAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSL 454
+ A Q+ D M+ S N TYN LI G C+ ++ A +++++ ++P LITYN+L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 455 IYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGI 514
I G C G L A + + GL P TY++ + C++G A + +E++GI
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 515 KAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALL 574
K +V YT LID + + ++ A L M +P+ +TY+ LI G + ++ EA
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 575 LVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYC 634
L + M + +P Y +I KEG A +LL +M L P+V +Y I+ C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 635 SIGKLDEAEDLIVKMNREGIVPDSVTYTLL 664
K EAE L+ KM GI P + +L+
Sbjct: 525 KERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 221/439 (50%), Gaps = 1/439 (0%)
Query: 276 YTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMS 335
Y +I+ +++ ++ ++ F M ++ P + ++ + ++ FFNE
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 336 ARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLME 395
++ +V+++ +LI C+ +++++ +LL + E G PNVV Y LIDG CK+G +E
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 396 AALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLI 455
A + M N RTY LI G K + + ++ E + P L TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 456 YGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIK 515
C++G A++V + E G+ + TY+ I LC+ ++ EA + D ++ GI
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 516 AGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLL 575
+ Y LIDG+C GK+ A SL + S P+ TYN L+ G R+ A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 576 VEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCS 635
V++M + G+KP+ TYTILI+ + + + A +L M LGL PDV+TY+ I +C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 636 IGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHT 695
G+++EA L M + P+ V Y +I Y G Y A +LK M + P+ +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 696 YAFLIKHLSNKKVDERKQQ 714
Y ++I+ L ++ + ++
Sbjct: 516 YRYMIEVLCKERKSKEAER 534
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%)
Query: 164 LKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAE 223
L S+ YN L+ + ++ EM + + P+ T+ +I+ + N+ +A
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 224 LYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGL 283
+ + GL PD TY+ LI G+C + + R+F M +K C NEV Y +I G
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 284 CEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNV 343
C+ AL L + M E + P V +Y +I LC+ + EA +M G +P+
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Query: 344 HTYTVL 349
+++
Sbjct: 549 SILSLI 554
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/646 (27%), Positives = 311/646 (48%), Gaps = 20/646 (3%)
Query: 74 LSPSHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVF 133
LSP H+ L + NP+ A ++ PG+ HS Y +L L +IV
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 134 LML-KSCSLDKEILF--------------VLDFLRRVNESGSEFSLKLSVKGYNTLLMQL 178
L+ + C D+++ LD +R+ E F + +++ YNTLL
Sbjct: 68 LIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREI---FGCEPAIRSYNTLLNAF 124
Query: 179 SKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDT 238
+ +++ ++ V PN+ T+N +I CK +A ++ + + G PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 239 FTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRR 298
F+Y+++I + ++ +F M ++G + Y LI G + K A++L+ R
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 299 MGEDD-CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKEN 357
+ ED P V+T+ ++I GL + GR + L+ + M E +++TY+ LI LC
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 358 KVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYN 417
VD+A + N + E+ +VVTYN ++ G+C+ G ++ +L++ +M+ N S N +YN
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 363
Query: 418 ELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINES 477
LI G + + A + + + + TY I+G C G+++ A V+ + S
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 478 GLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDA 537
G D + Y+ ID LCK+ R+EEA L + K G++ + ALI G ++ ++ +A
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 538 HSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEE 597
L M + C P +YN LI GL + K EA V++M + G KP + TY+IL+
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 598 VLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPD 657
+ ++ D A L Q + GL+ DV + I CS+GKLD+A ++ M +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 658 SVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL 703
VTY L+ + +G A + M+ G +P +Y ++K L
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/525 (30%), Positives = 266/525 (50%), Gaps = 20/525 (3%)
Query: 90 QTALDFSYWISQKPGFKHSVESYSSLLNLLIRNN--------FTKASEKIVF-------L 134
+ A F W+ K GFK V SYS+++N L + F + SE+ V +
Sbjct: 166 EKARGFLDWM-WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNI 224
Query: 135 MLKSCSLDKEILFVLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEM 194
++ +K+ ++ R+ E S + +VK +N ++ LSK VD+ +++ M
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYP---NVKTHNIMISGLSKCGRVDDCLKIWERM 281
Query: 195 LDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDV 254
N ++YT++++I+G C GNV +AE +++ + S D TY +++ G+CR +
Sbjct: 282 KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKI 341
Query: 255 EKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVV 314
++ ++ +M K N VSY LI GL E ++DEA ++R M TY +
Sbjct: 342 KESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 315 IFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGL 374
I GLC G ++AL E+ + G +V+ Y +IDCLCK+ +++EAS L+ M + G+
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 375 FPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMS 434
N NALI G ++ + A L M N C P +YN LICG CK A +
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 435 LLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLC 494
+ E+LE P L TY+ L+ G CR+ +D A ++ H +SGL D +++ I LC
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 495 KRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSY 554
G++++A + ++E + A V Y L++G+ K G + A + M P+
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 555 TYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVL 599
+YN ++ GL R V A+ + G+ PTVYT+ IL+ V+
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 172/331 (51%)
Query: 166 LSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELY 225
+++ YN L+ L + +DE ++ M + T+ I+G C G V +A
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 226 VSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCE 285
+ ++ +G D + Y S+I C+ K +E+ + M K G N LI GL
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 286 AKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHT 345
R+ EA R MG++ CRPTV +Y ++I GLC+ G+ EA F EM G +P++ T
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 346 YTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMK 405
Y++L+ LC++ K+D A EL ++ L+ GL +V+ +N LI G C G ++ A+ ++ M+
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 406 SNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLD 465
NC+ N TYN L+ GF K + +RA + + + L P +I+YN+++ G C +
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 466 SAYKVLHLINESGLVPDQFTYSVFIDTLCKR 496
A + G+ P +T+++ + + R
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 159/361 (44%), Gaps = 36/361 (9%)
Query: 383 ALIDGYCKEGLMEAALQILDLMKS-NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLE 441
++I Y K + + AL + M+ C P R+YN L+ F + K + SL
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 442 QNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEE 501
++P L TYN LI C++ + A L + + G PD F+YS I+ L K G++++
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 502 AQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCL-PNSYTYNALI 560
A LFD + ++G+ Y LIDG+ KE A L +R+L D + PN T+N +I
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 561 DGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLK 620
GL + +V + L + E+M + + +YTY+ LI + G+ D A + +++
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 621 PDVYTYTAFIQAYCSIG----------------------------------KLDEAEDLI 646
DV TY + +C G K+DEA +
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 647 VKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
M +G D TY + I G + A V++ + +G + YA +I L K
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 707 K 707
K
Sbjct: 443 K 443
Score = 33.5 bits (75), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 4/167 (2%)
Query: 550 LPNSYTYNALIDGLYRERKVQEALLLVEKMTKM-GVKPTVYTYTILIEEVLKEGDFDHAH 608
P S + ++ L E+ + A L + T+ G + Y ++ + + +H
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVS 63
Query: 609 RLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNRE--GIVPDSVTYTLLIC 666
R+++ + S K D + I+ Y D+A D+ +M RE G P +Y L+
Sbjct: 64 RIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRM-REIFGCEPAIRSYNTLLN 122
Query: 667 AYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDERKQ 713
A+ + AG P+ TY LIK KK E+ +
Sbjct: 123 AFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKAR 169
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/510 (31%), Positives = 264/510 (51%)
Query: 199 VVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGF 258
+ N+YT + MIN C+ + A + KI++ G P+T T+++LI G C V +
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 259 RVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGL 318
+ M + G + + ++ L++GLC + + EA+ L +M E C+P TY V+ +
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 319 CRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNV 378
C+ G+ + A+E +M R + + Y+++ID LCK +D A L N M KG+ N+
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 379 VTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNE 438
+TYN LI G+C G + ++L M +PN T++ LI F K + A L E
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 439 LLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGR 498
++ + ++P ITY SLI G C+E HLD A +++ L+ G P+ T+++ I+ CK R
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 499 VEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNA 558
+++ LF + +G+ A V Y LI G+C+ GK++ A L + M+S PN TY
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 559 LIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG 618
L+DGL + ++AL + EK+ K ++ + Y I+I + D A L + G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 619 LKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAF 678
+KP V TY I C G L EAE L KM +G PD TY +LI A+ G +
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 679 DVLKRMFDAGCEPSHHTYAFLIKHLSNKKV 708
+++ + G T +I LS+ ++
Sbjct: 599 KLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 249/481 (51%)
Query: 201 PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRV 260
PN TF+T+ING C G V EA V ++V+ G PD T +L+ G C + + +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 261 FMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCR 320
M + GC+ N V+Y +++ +C++ + A++L R+M E + + Y+++I GLC+
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 321 VGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVT 380
G A FNEM +G N+ TY +LI C + D+ ++LL M+++ + PNVVT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 381 YNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELL 440
++ LID + KEG + A ++ M +P+ TY LI GFCK ++ +A +++ ++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 441 EQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVE 500
+ P + T+N LI G C+ +D ++ ++ G+V D TY+ I C+ G++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 501 EAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALI 560
A+ LF + + + V Y L+DG C G+ + A + E++ + YN +I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 561 DGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLK 620
G+ KV +A L + GVKP V TY I+I + K+G A L +M G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 621 PDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDV 680
PD +TY I+A+ G ++ LI ++ R G D+ T ++I + L S D+
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDM 635
Query: 681 L 681
L
Sbjct: 636 L 636
Score = 252 bits (643), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 245/491 (49%), Gaps = 17/491 (3%)
Query: 226 VSKIVQAGLSPDTFTYTSLI-----LGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
VSK VQ L +LI L +C E+GF F RN L
Sbjct: 13 VSKFVQPRLLETGTLRIALINCPNELSFC----CERGFSAF-------SDRNLSYRERLR 61
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
GL + K D+A+DLFR M PTV ++ + + + + L +M +G
Sbjct: 62 SGLVDIK-ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
N++T +++I+C C+ K+ A + ++++ G PN +T++ LI+G C EG + AL++
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCR 460
+D M P+ T N L+ G C AM L+++++E P +TY ++ C+
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 461 EGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVI 520
G A ++L + E + D YS+ ID LCK G ++ A LF+ +E KGI +
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 521 YTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMT 580
Y LI G+C G+ DD LL M+ PN T++ LID +E K++EA L ++M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 581 KMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLD 640
G+ P TYT LI+ KE D A++++D MVS G P++ T+ I YC ++D
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 641 EAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
+ +L KM+ G+V D+VTY LI + LG + A ++ + M P+ TY L+
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 701 KHLSNKKVDER 711
L + E+
Sbjct: 481 DGLCDNGESEK 491
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 239/471 (50%)
Query: 236 PDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDL 295
P ++ L + K + + M KG N + + +I+ C +++ A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 296 FRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCK 355
++ + P T++ +I GLC GR SEALE + M G +P++ T L++ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 356 ENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNART 415
K EA L+++M+E G PN VTY +++ CK G A+++L M+ N +A
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 416 YNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLIN 475
Y+ +I G CK ++ A +L NE+ + ++ +ITYN LI G C G D K+L +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 476 ESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKID 535
+ + P+ T+SV ID+ K G++ EA+ L + +GI + YT+LIDG+CKE +D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 536 DAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILI 595
A+ +++ M+S C PN T+N LI+G + ++ + L L KM+ GV TY LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 596 EEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIV 655
+ + G + A L +MVS + P++ TY + C G+ ++A ++ K+ + +
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 656 PDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
D Y ++I + + A+D+ + G +P TY +I L K
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 191/393 (48%), Gaps = 8/393 (2%)
Query: 147 FVLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTF 206
++ LR++ E ++KL Y+ ++ L K +D ++ EM + NI T+
Sbjct: 246 LAMELLRKMEER----NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 207 NTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPK 266
N +I G C G + + +++ ++P+ T++ LI + + + + + M
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 267 KGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSE 326
+G + ++YT+LI G C+ +D+A + M C P +RT+ ++I G C+ R +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 327 ALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALID 386
LE F +MS RG + TY LI C+ K++ A EL M+ + + PN+VTY L+D
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 387 GYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSP 446
G C G E AL+I + ++ + + YN +I G C V A L L + + P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 447 TLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLF 506
+ TYN +I G C++G L A + + E G PD +TY++ I G ++ L
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 507 DSLEKKGIKAG----EVIYTALIDGYCKEGKID 535
+ L++ G +++ L DG K+ +D
Sbjct: 602 EELKRCGFSVDASTIKMVIDMLSDGRLKKSFLD 634
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 164 LKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAE 223
++L + YN ++ + VD+ ++ + V P + T+N MI G CK G + EAE
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 224 LYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGL 283
L K+ + G +PD +TY LI + + D K ++ + + G + + +I L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Query: 284 CEAKRVDEALDLF 296
+ + LD+
Sbjct: 624 SDGRLKKSFLDML 636
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 258/543 (47%), Gaps = 35/543 (6%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
+ T + K V+E +++ +M + V PN+ TFNT+I+G G EA ++ K+V
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
+ G+ P TY+ L+ G R K + + V M KKG N + Y NLI EA ++
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 395
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRK-------------------------- 324
+A+++ M T TY +I G C+ G+
Sbjct: 396 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455
Query: 325 ---------SEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLF 375
AL F EM R P T LI LCK K +A EL + L KG
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 515
Query: 376 PNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSL 435
+ T NAL+ G C+ G ++ A +I + C + +YN LI G C +K + A
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 436 LNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCK 495
L+E++++ L P TY+ LI G ++ A + +G++PD +TYSV ID CK
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 496 RGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYT 555
R EE Q FD + K ++ V+Y LI YC+ G++ A L E M PNS T
Sbjct: 636 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 695
Query: 556 YNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMV 615
Y +LI G+ +V+EA LL E+M G++P V+ YT LI+ K G LL +M
Sbjct: 696 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 755
Query: 616 SLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIY 675
S + P+ TYT I Y G + EA L+ +M +GIVPDS+TY I Y G +
Sbjct: 756 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 815
Query: 676 SAF 678
AF
Sbjct: 816 EAF 818
Score = 268 bits (686), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 192/668 (28%), Positives = 321/668 (48%), Gaps = 21/668 (3%)
Query: 46 LPSQIFTILSTHPTTWQRHTSITKLIPLLSPSHISSLF---SLDLNPQTALDFSYWISQK 102
L ++ ++LS +++ +LI +LSP LF +NP+TALDF S
Sbjct: 76 LHERLSSVLSKRSLDYEQ---CKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDS 132
Query: 103 PGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKS------CSLDKEILFVLDFLRRVN 156
F S+ SY L+ LL+ N A+ ++ ++ C L + + D + ++
Sbjct: 133 FSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLS 192
Query: 157 ES-GSEFSLKLS---VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMING 212
E K+S ++ Y T + + +D V+ + + + P+ T N ++
Sbjct: 193 LCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALD----VFPVLANKGMFPSKTTCNILLTS 248
Query: 213 CCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRN 272
+ N + +V G+SPD + +T+ I +C+ VE+ ++F M + G N
Sbjct: 249 LVR-ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPN 307
Query: 273 EVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFN 332
V++ +I GL R DEA +M E PT+ TY++++ GL R R +A
Sbjct: 308 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 367
Query: 333 EMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEG 392
EM+ +G PNV Y LID + +++A E+ + M+ KGL TYN LI GYCK G
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427
Query: 393 LMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYN 452
+ A ++L M S + N ++ +IC C A+ + E+L +N+SP
Sbjct: 428 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 487
Query: 453 SLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKK 512
+LI G C+ G A ++ G V D T + + LC+ G+++EA + + +
Sbjct: 488 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 547
Query: 513 GIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEA 572
G V Y LI G C + K+D+A L+ M+ P++YTY+ LI GL+ KV+EA
Sbjct: 548 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 607
Query: 573 LLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQA 632
+ + + G+ P VYTY+++I+ K + D+M+S ++P+ Y I+A
Sbjct: 608 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 667
Query: 633 YCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPS 692
YC G+L A +L M +GI P+S TYT LI + + + A + + M G EP+
Sbjct: 668 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 727
Query: 693 HHTYAFLI 700
Y LI
Sbjct: 728 VFHYTALI 735
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 223/478 (46%), Gaps = 35/478 (7%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
Y+ L+ L++ + + V EM PN+ +N +I+ + G++ +A +V
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTN------------ 278
GLS + TY +LI GYC+N + R+ M G N+ S+T+
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465
Query: 279 -----------------------LIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVI 315
LI GLC+ + +AL+L+ + RT ++
Sbjct: 466 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 316 FGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLF 375
GLC G+ EA E+ RGC + +Y LI C + K+DEA L+ M+++GL
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 376 PNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSL 435
P+ TY+ LI G +E A+Q D K N P+ TY+ +I G CK +
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 436 LNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCK 495
+E++ +N+ P + YN LI CR G L A ++ + G+ P+ TY+ I +
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 705
Query: 496 RGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYT 555
RVEEA++LF+ + +G++ YTALIDGY K G++ LL M S + PN T
Sbjct: 706 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 765
Query: 556 YNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQ 613
Y +I G R+ V EA L+ +M + G+ P TY I LK+G A + D+
Sbjct: 766 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 197/411 (47%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
L L+ YNTL+ K D +R+ EML N +F ++I C A
Sbjct: 408 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
+V +++ +SP T+LI G C++ K ++ KG + + L+HG
Sbjct: 468 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 527
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
LCEA ++DEA + + + C +Y +I G C + EA F +EM RG +P+
Sbjct: 528 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 587
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
+TY++LI L NKV+EA + + G+ P+V TY+ +IDG CK E + D
Sbjct: 588 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 647
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
M S N PN YN LI +C+ + A+ L ++ + +SP TY SLI G
Sbjct: 648 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 707
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYT 522
++ A + + GL P+ F Y+ ID K G++ + + L + K + ++ YT
Sbjct: 708 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 767
Query: 523 ALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEAL 573
+I GY ++G + +A LL M +P+S TY I G ++ V EA
Sbjct: 768 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 818
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 220/492 (44%), Gaps = 72/492 (14%)
Query: 292 ALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLID 351
ALD+F + P+ T +++ L R + E F ++ +G P+V+ +T I+
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 281
Query: 352 CLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSP 411
CK KV+EA +L ++M E G+ PNVVT+N +IDG G + A + M P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 412 NARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVL 471
TY+ L+ G + K + A +L E+ ++ P +I YN+LI G L+ A ++
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401
Query: 472 HLINESGLVPDQFTYSVFIDTLCKRGRVEEAQ---------------------------- 503
L+ GL TY+ I CK G+ + A+
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461
Query: 504 VLFDSLEK-------KGIKAGEVIYTALIDGYCKE------------------------- 531
++FDS + + + G + T LI G CK
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521
Query: 532 ----------GKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTK 581
GK+D+A + + +L C+ + +YN LI G ++K+ EA + +++M K
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 582 MGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDE 641
G+KP YTY+ILI + + A + D G+ PDVYTY+ I C + +E
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 642 AEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK 701
++ +M + + P++V Y LI AY G + A ++ + M G P+ TY LIK
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701
Query: 702 HLS-NKKVDERK 712
+S +V+E K
Sbjct: 702 GMSIISRVEEAK 713
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/571 (29%), Positives = 272/571 (47%), Gaps = 35/571 (6%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
YN L+ L K V E + ++ + P++ T+ T++ G CKV + +++
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
SP +SL+ G + +E+ + + G N Y LI LC+ ++
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLI 350
EA LF RMG+ RP TY+++I CR G+ AL F EM G + +V+ Y LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 351 DCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCS 410
+ CK + A + M+ K L P VVTY +L+ GYC +G + AL++ M +
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 411 PNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKV 470
P+ T+ L+ G + + A+ L NE+ E N+ P +TYN +I G C EG + A++
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 471 LHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCK 530
L + E G+VPD ++Y I LC G+ EA+V D L K + E+ YT L+ G+C+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 531 EGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYT 590
EGK+++A S+ + M+ + Y LIDG + + + L+++M G+KP
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 591 YTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMN 650
YT +I+ K GDF A + D M++ G P+ TYTA I C G ++EAE L KM
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 651 R-----------------------------------EGIVPDSVTYTLLICAYAHLGLIY 675
+G++ ++ TY +LI + G I
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 676 SAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
A +++ RM G P TY +I L +
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRR 835
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 265/530 (50%), Gaps = 2/530 (0%)
Query: 172 NTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQ 231
++L+ L K ++E + ++D V PN++ +N +I+ CK EAEL ++ +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 232 AGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDE 291
GL P+ TY+ LI +CR ++ M G + + Y +LI+G C+ +
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 292 ALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLID 351
A M PTV TYT ++ G C G+ ++AL ++EM+ +G P+++T+T L+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 352 CLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSP 411
L + + +A +L N M E + PN VTYN +I+GYC+EG M A + L M P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 412 NARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVL 471
+ +Y LI G C A ++ L + N I Y L++G CREG L+ A V
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 472 HLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKE 531
+ + G+ D Y V ID K + L + +G+K +VIYT++ID K
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 532 GKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTY 591
G +A + + M+++ C+PN TY A+I+GL + V EA +L KM + P TY
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 592 TILIEEVLKEGDFDHAHRL-LDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMN 650
++ +L +G+ D + L + GL + TY I+ +C G+++EA +LI +M
Sbjct: 756 GCFLD-ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 651 REGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
+G+ PD +TYT +I + A ++ M + G P Y LI
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 269 bits (687), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 198/742 (26%), Positives = 323/742 (43%), Gaps = 113/742 (15%)
Query: 60 TWQRHTSITKLIPLLSPSHISSLF--SLDLNPQTALDFSYWISQKPGFKHSVESYSSLLN 117
+W+ S + L H+ + ++D +P+ L F ++ GF HS S+ L++
Sbjct: 54 SWEIALSSELVSRRLKTVHVEEILIGTID-DPKLGLRFFNFLGLHRGFDHSTASFCILIH 112
Query: 118 LLIRNN-FTKASE----------------KIVFLMLKSCSLDKEILFVLDFLRRVNESGS 160
L++ N F AS ++F + C L F L V
Sbjct: 113 ALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRS--- 169
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
+ + G M ++K L+ P + T + +++G K + G
Sbjct: 170 ----RRVLDGVLVFKMMITKVSLL----------------PEVRTLSALLHGLVKFRHFG 209
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
A + +V G+ PD + YT +I C KD+ + + M GC N V Y LI
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
GLC+ ++V EA+ + + + D +P V TY +++GLC+V LE +EM
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
P+ + L++ L K K++EA L+ R+++ G+ PN+ YNALID CK A +
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLE------------------- 441
D M PN TY+ LI FC+R + A+S L E+++
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 442 ----------------QNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFT 485
+ L PT++TY SL+ G C +G ++ A ++ H + G+ P +T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 486 YSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERML 545
++ + L + G + +A LF+ + + +K V Y +I+GYC+EG + A L+ M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 546 SDDCLPNSYTYNALI----------------DGLY-------------------RERKVQ 570
+P++Y+Y LI DGL+ RE K++
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 571 EALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFI 630
EAL + ++M + GV + Y +LI+ LK D LL +M GLKPD YT+ I
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 631 QAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCE 690
A G EA + M EG VP+ VTYT +I G + A + +M
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 691 PSHHTYAFLIKHLSNKKVDERK 712
P+ TY + L+ +VD +K
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQK 771
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 169/569 (29%), Positives = 280/569 (49%), Gaps = 6/569 (1%)
Query: 128 SEKIVFLMLKSCSLDKEILFVLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEM 187
SE V +++ +I L+ ++RV + G +L + YN L+ L K E
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV----YNALIDSLCKGRKFHEA 386
Query: 188 KRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILG 247
+ ++ M + PN T++ +I+ C+ G + A ++ ++V GL + Y SLI G
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 248 YCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPT 307
+C+ D+ M K V+YT+L+ G C ++++AL L+ M P+
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 308 VRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLN 367
+ T+T ++ GL R G +A++ FNEM+ +PN TY V+I+ C+E + +A E L
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
M EKG+ P+ +Y LI G C G A +D + NC N Y L+ GFC+
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
+ A+S+ E++++ + L+ Y LI G + + +L +++ GL PD Y+
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686
Query: 488 VFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSD 547
ID K G +EA ++D + +G EV YTA+I+G CK G +++A L +M
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV 746
Query: 548 DCLPNSYTYNALIDGLYR-ERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDH 606
+PN TY +D L + E +Q+A+ L + K G+ TY +LI ++G +
Sbjct: 747 SSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEE 805
Query: 607 AHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLIC 666
A L+ +M+ G+ PD TYT I C + +A +L M +GI PD V Y LI
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 667 AYAHLGLIYSAFDVLKRMFDAGCEPSHHT 695
G + A ++ M G P++ T
Sbjct: 866 GCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 235/454 (51%), Gaps = 3/454 (0%)
Query: 279 LIHGLCEAKRVDEALDLFRRM-GEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSAR 337
LI ++RV + + +F+ M + P VRT + ++ GL + A+E FN+M +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 338 GCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAA 397
G P+V+ YT +I LC+ + A E++ M G N+V YN LIDG CK+ + A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 398 LQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYG 457
+ I + + P+ TY L+ G CK + + +++E+L SP+ +SL+ G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 458 QCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAG 517
+ G ++ A ++ + + G+ P+ F Y+ ID+LCK + EA++LFD + K G++
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 518 EVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVE 577
+V Y+ LID +C+ GK+D A S L M+ + Y YN+LI+G + + A +
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 578 KMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIG 637
+M ++PTV TYT L+ +G + A RL +M G+ P +YT+T + G
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 638 KLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYA 697
+ +A L +M + P+ VTY ++I Y G + AF+ LK M + G P ++Y
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 698 FLIKHLS-NKKVDERKQQCDGILFGFKCLISQRC 730
LI L + E K DG+ G C +++ C
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKG-NCELNEIC 614
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 177/646 (27%), Positives = 315/646 (48%), Gaps = 21/646 (3%)
Query: 72 PLLSPSHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKI 131
P L P H++++ +P AL+ + ++ GFKH++ +Y S++ L +A E++
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 132 VFLM----------------LKSCSLDKEILFVLDFLRRVNESGSEFSLKLSVKGYNTLL 175
+ M +K+ ++ ++ R++ + + +V YN ++
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDF----YDCEPTVFSYNAIM 118
Query: 176 MQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLS 235
L D+ +VY+ M D + P++Y+F + CK A ++ + G
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCE 178
Query: 236 PDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDL 295
+ Y +++ G+ +G+ +F M G ++ L+ LC+ V E L
Sbjct: 179 MNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 296 FRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCK 355
++ + P + TY + I GLC+ G A+ + +G +P+V TY LI LCK
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 356 ENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNART 415
+K EA L +M+ +GL P+ TYN LI GYCK G+++ A +I+ N P+ T
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 416 YNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLIN 475
Y LI G C +RA++L NE L + + P +I YN+LI G +G + A ++ + ++
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 476 ESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKID 535
E GL+P+ T+++ ++ LCK G V +A L + KG + LI GY + K++
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 536 DAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILI 595
+A +L+ ML + P+ YTYN+L++GL + K ++ + + M + G P ++T+ IL+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 596 EEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIV 655
E + + D A LL++M + + PD T+ I +C G LD A L KM V
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 656 PDSV-TYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
S TY ++I A+ + A + + M D P +TY ++
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 279/551 (50%), Gaps = 6/551 (1%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
+ L + +N LL L K V E +++ +++ V+PN++T+N I G C+ G + A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
V +++ G PD TY +LI G C+N ++ M +G + +Y LI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
C+ V A + + P TY +I GLC G + AL FNE +G +PN
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
V Y LI L + + EA++L N M EKGL P V T+N L++G CK G + A ++
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
+M S P+ T+N LI G+ + + A+ +L+ +L+ + P + TYNSL+ G C+
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYT 522
+ + + E G P+ FT+++ +++LC+ +++EA L + ++ K + V +
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 523 ALIDGYCKEGKIDDAHSLLERMLSDDCLPNSY-TYNALIDGLYRERKVQEALLLVEKMTK 581
LIDG+CK G +D A++L +M + +S TYN +I + V A L ++M
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 582 MGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDE 641
+ P YTY ++++ K G+ + ++ L +M+ G P + T I C ++ E
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690
Query: 642 AEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK 701
A +I +M ++G+VP++V IC + VL+ + C +++ Y L
Sbjct: 691 AAGIIHRMVQKGLVPEAVN---TICDVDKKEVAAPKL-VLEDLLKKSC-ITYYAYELLFD 745
Query: 702 HLSNKKVDERK 712
L +K++ ++K
Sbjct: 746 GLRDKRLRKKK 756
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/472 (30%), Positives = 228/472 (48%), Gaps = 1/472 (0%)
Query: 240 TYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRM 299
Y + Y R V++ VF M C SY ++ L ++ D+A ++ RM
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 300 GEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKV 359
+ P V ++T+ + C+ R AL N MS++GCE NV Y ++ +EN
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 360 DEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNEL 419
E EL +ML G+ + T+N L+ CK+G ++ ++LD + PN TYN
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 420 ICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGL 479
I G C+R + A+ ++ L+EQ P +ITYN+LIYG C+ A L + GL
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 480 VPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHS 539
PD +TY+ I CK G V+ A+ + G + Y +LIDG C EG+ + A +
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 540 LLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVL 599
L L PN YN LI GL + + EA L +M++ G+ P V T+ IL+ +
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 600 KEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSV 659
K G A L+ M+S G PD++T+ I Y + K++ A +++ M G+ PD
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 660 TYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSN-KKVDE 710
TY L+ + K M + GC P+ T+ L++ L +K+DE
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 151 FLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMI 210
R++ E+ + + S YN ++ ++ V ++++ EM+D + P+ YT+ M+
Sbjct: 588 LFRKMEEA---YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 211 NGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKG 268
+G CK GNV ++ ++++ G P T +I C V + + M +KG
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 279/544 (51%), Gaps = 3/544 (0%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ +N LL ++K + + + + +M + ++YT++ IN C+ + A +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
+K+++ G PD T +SL+ GYC +K + + M + G + + ++T LIHGL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+ EA+ L +M + C+P + TY V+ GLC+ G AL N+M A + NV +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+ID LCK V+ A +L M KG+ PNVVTYN+LI+ C G A ++L M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
+PN T+N LI F K + A L E++++++ P ITYN LI G C LD
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A ++ + +P+ TY+ I+ CK RVE+ LF + ++G+ V YT +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G+ + G D A + ++M+S+ + TY+ L+ GL K+ AL++ + + K ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
++ Y +IE + K G A D SL +KPDV TY I CS L EA+DL
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 647 VKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
KM +G +P+S TY LI A ++ +++K M +G T + + L +
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
Query: 707 KVDE 710
++D+
Sbjct: 619 RLDK 622
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 273/560 (48%), Gaps = 73/560 (13%)
Query: 177 QLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVS---KIVQAG 233
+LS VD+ ++ +M+ + P+I FN +++ V + + EL +S ++ G
Sbjct: 57 RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSA---VAKMNKFELVISLGEQMQTLG 113
Query: 234 LSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEAL 293
+S D +TY+ I +CR R+++S AL
Sbjct: 114 ISHDLYTYSIFINCFCR--------------------RSQLSL---------------AL 138
Query: 294 DLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCL 353
+ +M + P + T + ++ G C R S+A+ ++M G +P+ T+T LI L
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 354 CKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNA 413
NK EA L+++M+++G P++VTY +++G CK G ++ AL +L+ M++ N
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 414 RTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHL 473
+N +I CK ++V A+ L E+ + + P ++TYNSLI C G A ++L
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 474 INESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGK 533
+ E + P+ T++ ID K G++ EA+ L + + ++ I + Y LI+G+C +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 534 IDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTI 593
+D+A + + M+S DCLPN TYN LI+G + ++V++ + L +M++ G+ TYT
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 594 LIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEA----------- 642
+I+ + GD D A + QMVS + D+ TY+ + CS GKLD A
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 643 --------EDLIVKMNREG-------------IVPDSVTYTLLICAYAHLGLIYSAFDVL 681
+I M + G I PD VTY +I L+ A D+
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 682 KRMFDAGCEPSHHTYAFLIK 701
++M + G P+ TY LI+
Sbjct: 559 RKMKEDGTLPNSGTYNTLIR 578
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 222/421 (52%)
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
L + +VD+A+DLF M + P++ + ++ + ++ + + +M G +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
++TY++ I+C C+ +++ A +L +M++ G P++VT ++L++GYC + A+ ++D
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
M P+ T+ LI G A++L+++++++ P L+TY +++ G C+ G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYT 522
+D A +L+ + + + + ++ ID+LCK VE A LF +E KGI+ V Y
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 523 ALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKM 582
+LI+ C G+ DA LL ML PN T+NALID ++E K+ EA L E+M +
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 583 GVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEA 642
+ P TY +LI D A ++ MVS P++ TY I +C ++++
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 643 EDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKH 702
+L +M++ G+V ++VTYT +I + G SA V K+M TY+ L+
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 703 L 703
L
Sbjct: 478 L 478
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 249/519 (47%), Gaps = 17/519 (3%)
Query: 101 QKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFL------RR 154
Q G H + +YS +N R + + ++ M+K + +I+ + L +R
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK-LGYEPDIVTLSSLLNGYCHSKR 168
Query: 155 VNESGS------EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNT 208
++++ + E K + TL+ L + E + +M+ P++ T+ T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 209 MINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKG 268
++NG CK G++ A ++K+ A + + + ++I C+ + VE +F M KG
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 269 CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEAL 328
R N V+Y +LI+ LC R +A L M E P V T+ +I + G+ EA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 329 EFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGY 388
+ EM R +P+ TY +LI+ C N++DEA ++ M+ K PN+ TYN LI+G+
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 389 CKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTL 448
CK +E +++ M N TY +I GF + + A + +++ + +
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 449 ITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDS 508
+TY+ L++G C G LD+A + + +S + + F Y+ I+ +CK G+V EA LF S
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 509 LEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERK 568
L IK V Y +I G C + + +A L +M D LPNS TYN LI R+
Sbjct: 529 LS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Query: 569 VQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHA 607
+ L+++M G T + L+ +L +G D +
Sbjct: 586 RAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKS 623
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 464 LDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTA 523
+D A + + +S P ++ + + K + E L + ++ GI Y+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 524 LIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMG 583
I+ +C+ ++ A ++L +M+ P+ T ++L++G +++ +A+ LV++M +MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 584 VKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAE 643
KP +T+T LI + A L+DQMV G +PD+ TY + C G +D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 644 DLIVKMNREGIVPDSVTYTLLI---CAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
+L+ KM I + V + +I C Y H+ + A D+ M G P+ TY LI
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV---AVDLFTEMETKGIRPNVVTYNSLI 300
Query: 701 KHLSN 705
L N
Sbjct: 301 NCLCN 305
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 40/103 (38%)
Query: 605 DHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLL 664
D A L MV P + + + A + K + L +M GI D TY++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 665 ICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKK 707
I + + A VL +M G EP T + L+ + K
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 276 bits (707), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 314/629 (49%), Gaps = 9/629 (1%)
Query: 72 PLLSPSHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKI 131
P SP + S FSL +P DFSY + + + S ++ L +RN S
Sbjct: 88 PFASPKELFSAFSLS-SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDS 146
Query: 132 VFLMLKSCSLDKEILFVLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVY 191
+ L+L K+ ++ + ES + S Y + K V + ++
Sbjct: 147 LTLLLDHLVKTKQFRVTINVFLNILES----DFRPSKFMYGKAIQAAVKLSDVGKGLELF 202
Query: 192 LEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRN 251
M + + P+++ +N +I+G CK + +AE +++ L P TY +LI GYC+
Sbjct: 203 NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA 262
Query: 252 KDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTY 311
+ EK F+V M + +++ L+ GL +A V++A ++ + M + P T+
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322
Query: 312 TVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLE 371
+++ G + AL + G + N +T ++L++ LCKE K+++A E+L R +
Sbjct: 323 SILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA 382
Query: 372 KGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHR 431
KGL PN V YN +IDGYC++G + A ++ M+ P+ YN LI FC+ +
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 432 AMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFID 491
A +N++ + +SP++ TYN LI G R+ D + +L + ++G +P+ +Y I+
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 492 TLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLP 551
LCK ++ EAQ++ +E +G+ IY LIDG C +GKI+DA + ML
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 552 NSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLL 611
N TYN LIDGL K+ EA L+ ++++ G+KP V+TY LI G+ L
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 612 DQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHL 671
++M G+KP + TY I + C+ ++ E L +M+ + PD + Y ++ YA
Sbjct: 623 EEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVH 678
Query: 672 GLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
G + AF++ K+M + TY LI
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 230/466 (49%)
Query: 239 FTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRR 298
F+Y L + +K + + +F + +G + S T L+ L + K+ +++F
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 299 MGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENK 358
+ E D RP+ Y I ++ + LE FN M P+V Y VLID LCK +
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 359 VDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNE 418
+++A +L + ML + L P+++TYN LIDGYCK G E + ++ + MK+++ P+ T+N
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 419 LICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESG 478
L+ G K V A ++L E+ + P T++ L G ++A V +SG
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 479 LVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAH 538
+ + +T S+ ++ LCK G++E+A+ + KG+ EVIY +IDGYC++G + A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 539 SLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEV 598
+E M P+ YN LI +++ A V KM GV P+V TY ILI
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 599 LKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDS 658
++ +FD +L +M G P+V +Y I C KL EA+ + M G+ P
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 659 VTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLS 704
Y +LI G I AF K M G E + TY LI LS
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 220/461 (47%), Gaps = 4/461 (0%)
Query: 190 VYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYC 249
VY +D+ V N YT + ++N CK G + +AE + + + GL P+ Y ++I GYC
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 250 RNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVR 309
R D+ M K+G + + ++Y LI CE ++ A +M P+V
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 310 TYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRM 369
TY ++I G R + + EM G PNV +Y LI+CLCK +K+ EA + M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 370 LEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNV 429
++G+ P V YN LIDG C +G +E A + M N TYN LI G +
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 430 HRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVF 489
A LL E+ + L P + TYNSLI G G++ + + SG+ P TY +
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 490 IDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDC 549
I +LC + +E + LF + +K ++Y ++ Y G ++ A +L ++M+
Sbjct: 641 I-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Query: 550 LPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHR 609
+ TYN+LI G + K+ E L+++M ++P TY I+++ + D+ A+
Sbjct: 697 GLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYV 756
Query: 610 LLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMN 650
+M G DV + + EAE +I +MN
Sbjct: 757 WYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 202/429 (47%), Gaps = 4/429 (0%)
Query: 155 VNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCC 214
V E+ + +K++ + LL L K +++ + + + +VPN +NTMI+G C
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 215 KVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEV 274
+ G++ A + + + + G+ PD Y LI +C ++E + M KG +
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 275 SYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEM 334
+Y LI G D+ D+ + M ++ P V +Y +I LC+ + EA +M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 335 SARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLM 394
RG P V Y +LID C + K+++A ML+KG+ N+VTYN LIDG G +
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 395 EAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSL 454
A +L + P+ TYN LI G+ NV R ++L E+ + PTL TY+ L
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 455 IYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGI 514
I +EG L E L PD Y+ + G +E+A L + +K I
Sbjct: 641 ISLCTKEG----IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Query: 515 KAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALL 574
+ Y +LI G K GK+ + SL++ M + + P + TYN ++ G + A +
Sbjct: 697 GLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYV 756
Query: 575 LVEKMTKMG 583
+M + G
Sbjct: 757 WYREMQEKG 765
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 159/344 (46%), Gaps = 6/344 (1%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
SV+ YN L+ + + D+ + EM DN +PN+ ++ T+IN CK + EA++
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
+ G+SP Y LI G C +E FR M KKG N V+Y LI GL
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
++ EA DL + +P V TY +I G G + + EM G +P + TY
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 347 TVLIDCLCKENKVDEASELLNRML-EKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMK 405
+LI LC + E EL R+ E L P+++ YN ++ Y G ME A + M
Sbjct: 638 HLLIS-LCTK----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 406 SNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLD 465
+ + TYN LI G K + SL++E+ + + P TYN ++ G C
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYM 752
Query: 466 SAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSL 509
SAY + E G + D + + L + R +EA+++ +
Sbjct: 753 SAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 141/295 (47%), Gaps = 5/295 (1%)
Query: 423 FCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPD 482
F K + A SL + L+ + S L+ S++ + + + A + + G+ P
Sbjct: 89 FASPKELFSAFSLSSPSLKHDFSYLLL---SVLLNESK--MISEAADLFFALRNEGIYPS 143
Query: 483 QFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLE 542
+ ++ +D L K + +F ++ + + + +Y I K + L
Sbjct: 144 SDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFN 203
Query: 543 RMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEG 602
RM D P+ + YN LIDGL + +++ +A L ++M + P++ TY LI+ K G
Sbjct: 204 RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG 263
Query: 603 DFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYT 662
+ + + ++ ++M + ++P + T+ ++ G +++AE+++ +M G VPD+ T++
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 663 LLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDERKQQCDG 717
+L Y+ +A V + D+G + + +T + L+ L + E+ ++ G
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 276 bits (706), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 169/619 (27%), Positives = 299/619 (48%), Gaps = 30/619 (4%)
Query: 103 PGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDK-EIL--------------F 147
P FKH+ S S+++++L+R+ ++ + M++ + + EI+
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 148 VLDFL-------RRVNESGSEFSL------KLSVKGYNTLLMQLSKFHLVDEMKRVYLEM 194
V D L R++ E+ F+L +S+ N L+ L + V+ VY E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 195 LDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDV 254
+ V N+YT N M+N CK G + + ++S++ + G+ PD TY +LI Y +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 255 EKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVV 314
E+ F + MP KG +Y +I+GLC+ + + A ++F M P TY +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 315 IFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGL 374
+ C+ G E + F++M +R P++ ++ ++ + +D+A N + E GL
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 375 FPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMS 434
P+ V Y LI GYC++G++ A+ + + M C+ + TYN ++ G CKRK + A
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 435 LLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLC 494
L NE+ E+ L P T LI G C+ G+L +A ++ + E + D TY+ +D
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 495 KRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSY 554
K G ++ A+ ++ + K I + Y+ L++ C +G + +A + + M+S + P
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 555 TYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQM 614
N++I G R + +EKM G P +Y LI ++E + A L+ +M
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 615 V--SLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLG 672
GL PDV+TY + + +C ++ EAE ++ KM G+ PD TYT +I +
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Query: 673 LIYSAFDVLKRMFDAGCEP 691
+ AF + M G P
Sbjct: 707 NLTEAFRIHDEMLQRGFSP 725
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 222/424 (52%)
Query: 269 CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEAL 328
C N+ + LI +A+++ EA + F + ++ +I L R+G A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 329 EFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGY 388
+ E+S G NV+T ++++ LCK+ K+++ L+++ EKG++P++VTYN LI Y
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 389 CKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTL 448
+GLME A ++++ M SP TYN +I G CK RA + E+L LSP
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 449 ITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDS 508
TY SL+ C++G + KV + +VPD +S + + G +++A + F+S
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 509 LEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERK 568
+++ G+ VIYT LI GYC++G I A +L ML C + TYN ++ GL + +
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 569 VQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTA 628
+ EA L +MT+ + P YT TILI+ K G+ +A L +M ++ DV TY
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 629 FIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAG 688
+ + +G +D A+++ M + I+P ++Y++L+ A G + AF V M
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 689 CEPS 692
+P+
Sbjct: 581 IKPT 584
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 18/364 (4%)
Query: 345 TYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLM 404
+ + +I L + ++ +A L RM+ + + N+L +
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTF---------------- 158
Query: 405 KSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHL 464
+NC N ++ LI + + + + A L + + ++ N+LI R G +
Sbjct: 159 --SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV 216
Query: 465 DSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTAL 524
+ A+ V I+ SG+ + +T ++ ++ LCK G++E+ +++KG+ V Y L
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 525 IDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGV 584
I Y +G +++A L+ M P YTYN +I+GL + K + A + +M + G+
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 585 KPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAED 644
P TY L+ E K+GD ++ M S + PD+ +++ + + G LD+A
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 645 LIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLS 704
+ G++PD+V YT+LI Y G+I A ++ M GC TY ++ L
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 705 NKKV 708
+K+
Sbjct: 457 KRKM 460
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 522 TALIDGYCKEGKIDDAHSLLERMLS-----------------DDCLPNSYTYNALIDGLY 564
+A+I + G++ DA S L RM+ +C N ++ LI
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYV 176
Query: 565 RERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVY 624
+ RK++EA + G ++ LI +++ G + A + ++ G+ +VY
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVY 236
Query: 625 TYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRM 684
T + A C GK+++ + ++ +G+ PD VTY LI AY+ GL+ AF+++ M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 685 FDAGCEPSHHTYAFLIKHLSNKKVDERKQQ 714
G P +TY +I L ER ++
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/586 (30%), Positives = 290/586 (49%), Gaps = 16/586 (2%)
Query: 92 ALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCS----LDKEILF 147
AL F YW F+H + Y + L+ N + + +++ ML++ S L++ +
Sbjct: 110 ALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGM 169
Query: 148 VLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFN 207
V+D N+ + S+ + N +L + L++ + V+ EM VVP+ ++
Sbjct: 170 VMDM---QNQGLTPSSITM-----NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 208 TMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKK 267
M+ GC + G + EA+ +++ ++Q G PD T T ++ C N V + F M
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 268 GCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEA 327
G + N +++T+LI GLC+ + +A ++ M + +P V T+T +I GLC+ G +A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 328 LEFFNEM-SARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALID 386
F ++ + +PNVHTYT +I CKE+K++ A L +RM E+GLFPNV TY LI+
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 387 GYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSP 446
G+CK G A ++++LM PN TYN I CK+ A LLN+ L
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 447 TLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLF 506
+TY LI QC++ ++ A +N++G D ++ I C++ +++E++ LF
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 507 DSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRE 566
+ G+ + YT++I YCKEG ID A M C+P+S+TY +LI GL ++
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 567 RKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTY 626
V EA L E M G+ P T L E K D +A LL+ L K + T
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE---PLDKKLWIRTV 638
Query: 627 TAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLG 672
++ CS K+ A K+ + D VT A + G
Sbjct: 639 RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 684
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 210/434 (48%), Gaps = 2/434 (0%)
Query: 279 LIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARG 338
++ E R++EA+ + M P+ T V+ +G A F+EMS RG
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 339 CEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAAL 398
P+ +Y +++ ++ K+ EA L M+++G P+ T ++ C+ GL+ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 399 QILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQ 458
M PN + LI G CK+ ++ +A +L E++ P + T+ +LI G
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 459 CREGHLDSAYKV-LHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAG 517
C+ G + A+++ L L+ P+ TY+ I CK ++ A++LF ++++G+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 518 EVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVE 577
YT LI+G+CK G A+ L+ M + +PN YTYNA ID L ++ + EA L+
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 578 KMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIG 637
K G++ TYTILI+E K+ D + A +M G + D+ I A+C
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 638 KLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYA 697
K+ E+E L + G++P TYT +I Y G I A M GC P TY
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572
Query: 698 FLIKHLSNKK-VDE 710
LI L K VDE
Sbjct: 573 SLISGLCKKSMVDE 586
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 273/528 (51%), Gaps = 1/528 (0%)
Query: 184 VDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTS 243
+D+ ++ +M+ + P+I F+ +++ K+ ++ G+S + +TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 244 LILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDD 303
I +CR + + M K G + V+ +L++G C R+ EA+ L +M E
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 304 CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEAS 363
+P T+T ++ GL + + SEA+ M +GC+P++ TY +I+ LCK + D A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 364 ELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGF 423
LLN+M + + +VV YN +IDG CK M+ A + + M++ P+ TYN LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 424 CKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVL-HLINESGLVPD 482
C A LL+++LE+N++P L+ +N+LI +EG L A K+ ++ PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 483 QFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLE 542
Y+ I CK RVEE +F + ++G+ V YT LI G+ + D+A + +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 543 RMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEG 602
+M+SD P+ TYN L+DGL V+ AL++ E M K +K + TYT +IE + K G
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 603 DFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYT 662
+ L + G+KP+V TYT + +C G +EA+ L V+M +G +P+S TY
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 663 LLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDE 710
LI A G ++ +++K M G T+ + L + ++D+
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDK 583
Score = 268 bits (686), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 168/543 (30%), Positives = 265/543 (48%), Gaps = 61/543 (11%)
Query: 101 QKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFLRRVNESGS 160
Q G H++ +YS +N F RR S
Sbjct: 102 QNLGISHNLYTYSIFINY--------------------------------FCRR-----S 124
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
+ SL L++ G +M+ P+I T N+++NG C +
Sbjct: 125 QLSLALAILG----------------------KMMKLGYGPSIVTLNSLLNGFCHGNRIS 162
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
EA V ++V+ G PDT T+T+L+ G ++ + + M KGC+ + V+Y +I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
+GLC+ D AL+L +M + V Y +I GLC+ +A + FN+M +G +
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
P+V TY LI CLC + +AS LL+ MLEK + P++V +NALID + KEG + A ++
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 401 LD-LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQC 459
D ++KS +C P+ YN LI GFCK K V M + E+ ++ L +TY +LI+G
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 460 REGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEV 519
+ D+A V + G+ PD TY++ +D LC G VE A V+F+ ++K+ +K V
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 520 IYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKM 579
YT +I+ CK GK++D L + PN TY ++ G R+ +EA L +M
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 580 TKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKL 639
+ G P TY LI L++GD + L+ +M S G D T+ + G+L
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRL 581
Query: 640 DEA 642
D++
Sbjct: 582 DKS 584
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 160/307 (52%), Gaps = 2/307 (0%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
+K V YN L+ L + + R+ +ML+ + P++ FN +I+ K G + EA
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 223 E-LYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIH 281
E LY + PD Y +LI G+C+ K VE+G VF M ++G N V+YT LIH
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 282 GLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEP 341
G +A+ D A +F++M D P + TY +++ GLC G AL F M R +
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 342 NVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQIL 401
++ TYT +I+ LCK KV++ +L + KG+ PNVVTY ++ G+C++GL E A +
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 402 DLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCRE 461
MK + PN+ TYN LI + + + L+ E+ + T+ L+ +
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHD 578
Query: 462 GHLDSAY 468
G LD ++
Sbjct: 579 GRLDKSF 585
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 533 KIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYT 592
K+DDA L M+ P+ ++ L+ + + K + L E+M +G+ +YTY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 593 ILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNRE 652
I I + A +L +M+ LG P + T + + +C ++ EA L+ +M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 653 GIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
G PD+VT+T L+ A +++RM GC+P TY +I L +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 9/242 (3%)
Query: 498 RVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYN 557
++++A LF + K V ++ L+ K K D SL E+M + N YTY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 558 ALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSL 617
I+ R ++ AL ++ KM K+G P++ T L+ A L+DQMV +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 618 GLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSA 677
G +PD T+T + K EA L+ +M +G PD VTY +I G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 678 FDVLKRMFDAGCEPSHHTYAFLIKHLSN-KKVDE-----RKQQCDGI---LFGFKCLISQ 728
++L +M E Y +I L K +D+ K + GI +F + LIS
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 729 RC 730
C
Sbjct: 295 LC 296
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 273 bits (697), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 186/699 (26%), Positives = 322/699 (46%), Gaps = 75/699 (10%)
Query: 74 LSPSHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVF 133
LS S + + L P + F W ++ G+KH+ Y++L++L++R++ K E+ +
Sbjct: 130 LSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQ 189
Query: 134 LMLKSCSLDKEIL--FVLDFLRRVNESGS------------EFSLKLSVKGYNTLLMQLS 179
+ DKE+ F+ +R+ +GS +F + S YN L+
Sbjct: 190 QIRDD---DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFL 246
Query: 180 KFHLVDEMKRVYLEM-LDNM-------------------------------VVPNIYTFN 207
K +D ++ EM L N+ VP+ +
Sbjct: 247 KADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYT 306
Query: 208 TMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKK 267
+I+G C+ EA +++++ P+ TY++L+ G K + + RV MM +
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 268 GCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSE- 326
GC + + +L+H C + A L ++M + P Y ++I +C G K
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSL 424
Query: 327 -------ALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVV 379
A + ++EM A G N + CLC K ++A ++ M+ +G P+
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 380 TYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNEL 439
TY+ +++ C ME A + + MK + TY ++ FCK + +A NE+
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 440 LEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRV 499
E +P ++TY +LI+ + + A ++ + G +P+ TYS ID CK G+V
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 500 EEAQVLFDSL----------------EKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLER 543
E+A +F+ + + + V Y AL+DG+CK ++++A LL+
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 544 MLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGD 603
M + C PN Y+ALIDGL + K+ EA + +M++ G T+YTY+ LI+ K
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 604 FDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTL 663
D A ++L +M+ P+V YT I C +GK DEA L+ M +G P+ VTYT
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 664 LICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKH 702
+I + +G I + ++L+RM G P++ TY LI H
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 200/656 (30%), Positives = 284/656 (43%), Gaps = 97/656 (14%)
Query: 148 VLDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFN 207
+DFL R+ + S +V Y+TLL + KRV M+ P+ FN
Sbjct: 321 AMDFLNRMRAT----SCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376
Query: 208 TMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKD-------------- 253
++++ C G+ A + K+V+ G P Y LI C +KD
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAY 436
Query: 254 ---------------------------VEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
EK F V M +G + +Y+ +++ LC A
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+++ A LF M V TYT+++ C+ G +A ++FNEM GC PNV TY
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLM-- 404
T LI K KV A+EL ML +G PN+VTY+ALIDG+CK G +E A QI + M
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616
Query: 405 --------------KSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLIT 450
N+ PN TY L+ GFCK V A LL+ + + P I
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 451 YNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLE 510
Y++LI G C+ G LD A +V ++E G +TYS ID K R + A + +
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 511 KKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQ 570
+ VIYT +IDG CK GK D+A+ L++ M C PN TY A+IDG K++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 571 EALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFI 630
L L+E+M GV P TY +LI+ K G D AH LL++M Y I
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 631 QAYC-----SIGKLDEAE---------------DLIVKMNR---------------EGIV 655
+ + S+G LDE D ++K R +V
Sbjct: 857 EGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLV 916
Query: 656 PDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL-SNKKVDE 710
S TY LI + + +AF + M G P ++ LIK L N K+ E
Sbjct: 917 DYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 247/489 (50%), Gaps = 28/489 (5%)
Query: 172 NTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQ 231
N M+L+ F L +EMKR +V ++YT+ M++ CK G + +A + +++ +
Sbjct: 495 NASKMELA-FLLFEEMKR-------GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 232 AGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDE 291
G +P+ TYT+LI Y + K V +F M +GC N V+Y+ LI G C+A +V++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 292 ALDLFRRM-GEDDC---------------RPTVRTYTVVIFGLCRVGRKSEALEFFNEMS 335
A +F RM G D RP V TY ++ G C+ R EA + + MS
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 336 ARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLME 395
GCEPN Y LID LCK K+DEA E+ M E G + TY++LID Y K +
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 396 AALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLI 455
A ++L M N+C+PN Y E+I G CK A L+ + E+ P ++TY ++I
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Query: 456 YGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIK 515
G G +++ ++L + G+ P+ TY V ID CK G ++ A L + +++
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846
Query: 516 AGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLL 575
Y +I+G+ KE ++ LL+ + DD P Y LID L + ++++ AL L
Sbjct: 847 THTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904
Query: 576 VEKMTKMGVKPTVY--TYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAY 633
+E++ Y TY LIE + + A +L +M G+ P++ ++ + I+
Sbjct: 905 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 634 CSIGKLDEA 642
K+ EA
Sbjct: 965 FRNSKISEA 973
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 174/345 (50%), Gaps = 8/345 (2%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
+V Y LL K H V+E +++ M PN ++ +I+G CKVG + EA+
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
+++ + G +TY+SLI Y + K + +V M + C N V YT +I GLC+
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+ DEA L + M E C+P V TYT +I G +G+ LE M ++G PN TY
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
VLID CK +D A LL M + + Y +I+G+ KE + +L +LD +
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQ 875
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLI----TYNSLIYGQCREG 462
++ +P Y LI K + + A+ LL E+ S TL+ TYNSLI C
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLAN 933
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFD 507
+++A+++ + + G++P+ ++ I L + ++ EA +L D
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 4/291 (1%)
Query: 149 LDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNT 208
LD + V SE ++ Y++L+ + K D +V +ML+N PN+ +
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749
Query: 209 MINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKG 268
MI+G CKVG EA + + + G P+ TYT++I G+ +E + M KG
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 269 CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEAL 328
N V+Y LI C+ +D A +L M + Y VI G + E+L
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESL 867
Query: 329 EFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRM--LEKGLFPNVVTYNALID 386
+E+ P + Y +LID L K +++ A LL + L TYN+LI+
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIE 927
Query: 387 GYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLN 437
C +E A Q+ M P +++ LI G + + A+ LL+
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 272 bits (695), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 229/425 (53%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ + LL ++K + D + ++ +M + P + T N +++ C A ++
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
K+++ G PD T+TSL+ GYC +E +F + G + N V+YT LI LC+
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+ ++ A++LF +MG + RP V TY ++ GLC +GR +A +M R EPNV T+
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
T LID K K+ EA EL N M++ ++P+V TY +LI+G C GL++ A Q+ LM+
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
N C PN Y LI GFCK K V M + E+ ++ + ITY LI G C G D
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A +V + ++ PD TY+V +D LC G+VE+A ++F+ + K+ + V YT +I
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G CK GK++DA L + S PN TY +I G R + EA L +KM + G P
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 587 TVYTY 591
Y
Sbjct: 502 NESVY 506
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 206/383 (53%)
Query: 279 LIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARG 338
++H +C + + A +M + P + T+T ++ G C R +A+ F+++ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 339 CEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAAL 398
+PNV TYT LI CLCK ++ A EL N+M G PNVVTYNAL+ G C+ G A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 399 QILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQ 458
+L M PN T+ LI F K + A L N +++ ++ P + TY SLI G
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 459 CREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGE 518
C G LD A ++ +L+ +G P++ Y+ I CK RVE+ +F + +KG+ A
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 519 VIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEK 578
+ YT LI GYC G+ D A + +M S P+ TYN L+DGL KV++AL++ E
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 579 MTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGK 638
M K + + TYTI+I+ + K G + A L + S G+KP+V TYT I +C G
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 639 LDEAEDLIVKMNREGIVPDSVTY 661
+ EA+ L KM +G +P+ Y
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVY 506
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 220/423 (52%)
Query: 274 VSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNE 333
+ +T L+ + + R D + LF +M P + T +V+ +C + A F +
Sbjct: 84 IDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGK 143
Query: 334 MSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGL 393
M G EP++ T+T L++ C N++++A L +++L G PNVVTY LI CK
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 394 MEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNS 453
+ A+++ + M +N PN TYN L+ G C+ A LL +++++ + P +IT+ +
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 454 LIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKG 513
LI + G L A ++ +++ + + PD FTY I+ LC G ++EA+ +F +E+ G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 514 IKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEAL 573
EVIYT LI G+CK +++D + M + N+ TY LI G + A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 574 LLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAY 633
+ +M+ P + TY +L++ + G + A + + M + ++ TYT IQ
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 634 CSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSH 693
C +GK+++A DL + +G+ P+ +TYT +I + GLI+ A + K+M + G P+
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Query: 694 HTY 696
Y
Sbjct: 504 SVY 506
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 218/426 (51%)
Query: 275 SYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEM 334
SY ++ + ++ALDLF RM P++ +T ++ + ++ R + F +M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 335 SARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLM 394
G P + T +++ C+C ++ AS L +M++ G P++VT+ +L++GYC +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 395 EAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSL 454
E A+ + D + PN TY LI CK ++++ A+ L N++ P ++TYN+L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 455 IYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGI 514
+ G C G A +L + + + P+ T++ ID K G++ EA+ L++ + + +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 515 KAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALL 574
Y +LI+G C G +D+A + M + C PN Y LI G + ++V++ +
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 575 LVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYC 634
+ +M++ GV TYT+LI+ G D A + +QM S PD+ TY + C
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 635 SIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHH 694
GK+++A + M + + + VTYT++I LG + AFD+ +F G +P+
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 695 TYAFLI 700
TY +I
Sbjct: 470 TYTTMI 475
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 165/324 (50%)
Query: 163 SLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
K +V Y TL+ L K ++ ++ +M N PN+ T+N ++ G C++G G+A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
+ +++ + P+ T+T+LI + + + + ++ +M + + +Y +LI+G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
LC +DEA +F M + C P YT +I G C+ R + ++ F EMS +G N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
TYTVLI C + D A E+ N+M + P++ TYN L+DG C G +E AL I +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
M+ N TY +I G CK V A L L + + P +ITY ++I G CR G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 463 HLDSAYKVLHLINESGLVPDQFTY 486
+ A + + E G +P++ Y
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 176/382 (46%), Gaps = 9/382 (2%)
Query: 358 KVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYN 417
+ ++A +L RM+ P+++ + L+ K + + + + M+ P T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 418 ELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINES 477
++ C RA L ++++ P L+T+ SL+ G C ++ A + I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 478 GLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDA 537
G P+ TY+ I LCK + A LF+ + G + V Y AL+ G C+ G+ DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 538 HSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEE 597
LL M+ PN T+ ALID + K+ EA L M +M V P V+TY LI
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 598 VLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPD 657
+ G D A ++ M G P+ YT I +C ++++ + +M+++G+V +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 658 SVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL-SNKKVDE------ 710
++TYT+LI Y +G A +V +M P TY L+ L N KV++
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 711 --RKQQCDGILFGFKCLISQRC 730
RK++ D + + +I C
Sbjct: 423 YMRKREMDINIVTYTIIIQGMC 444
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 140/314 (44%), Gaps = 18/314 (5%)
Query: 412 NARTYNEL-ICGFC------------KRKNVHR-----AMSLLNELLEQNLSPTLITYNS 453
N RT L +CGFC R +H A+ L ++ P++I +
Sbjct: 29 NPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTR 88
Query: 454 LIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKG 513
L+ + D + + G+ P T ++ + +C + A + K G
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 514 IKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEAL 573
+ V +T+L++GYC +I+DA +L +++L PN TY LI L + R + A+
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 574 LLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAY 633
L +M G +P V TY L+ + + G + A LL M+ ++P+V T+TA I A+
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 634 CSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSH 693
+GKL EA++L M + + PD TY LI GL+ A + M GC P+
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 694 HTYAFLIKHLSNKK 707
Y LI K
Sbjct: 329 VIYTTLIHGFCKSK 342
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%)
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
+ S+ V Y +L+ L + L+DE ++++ M N PN + T+I+G CK V
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
+ ++ Q G+ +T TYT LI GYC + VF M + + +Y L+
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
GLC +V++AL +F M + + + TYT++I G+C++G+ +A + F + ++G +
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTY 381
PNV TYT +I C+ + EA L +M E G PN Y
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 279/546 (51%), Gaps = 4/546 (0%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
+V +N L ++K + + + +M + +IYT + MIN C+ + A +
Sbjct: 87 TVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTM 146
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
KI++ G PDT + +L+ G C V + + M + G + ++ L++GLC
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+V +A+ L RM E +P TY V+ +C+ G+ + A+E +M R + + Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+++ID LCK+ +D A L N M KG +++TYN LI G+C G + ++L M
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
SPN T++ LI F K + A LL E++++ ++P ITYNSLI G C+E L+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A +++ L+ G PD T+++ I+ CK R+++ LF + +G+ A V Y L+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G+C+ GK++ A L + M+S P+ +Y L+DGL ++++AL + K+ K ++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
+ Y I+I + D A L + G+K D Y I C L +A+ L
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 647 VKMNREGIVPDSVTYTLLICAYAHLG--LIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLS 704
KM EG PD +TY +LI AHLG +A ++++ M +G T +I LS
Sbjct: 567 RKMTEEGHAPDELTYNILI--RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Query: 705 NKKVDE 710
+ ++D+
Sbjct: 625 SGELDK 630
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 263/523 (50%), Gaps = 1/523 (0%)
Query: 184 VDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTS 243
D+ ++ +M+ + +P + FN + + K ++ G++ +T +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 244 LILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDD 303
+I +CR + + F + K G + V + L++GLC RV EAL+L RM E
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 304 CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEAS 363
+PT+ T ++ GLC G+ S+A+ + M G +PN TY +++ +CK + A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 364 ELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGF 423
ELL +M E+ + + V Y+ +IDG CK+G ++ A + + M+ + TYN LI GF
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 424 CKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQ 483
C LL +++++ +SP ++T++ LI +EG L A ++L + + G+ P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 484 FTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLER 543
TY+ ID CK R+EEA + D + KG + + LI+GYCK +IDD L
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 544 MLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGD 603
M + N+ TYN L+ G + K++ A L ++M V+P + +Y IL++ + G+
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 604 FDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTL 663
+ A + ++ ++ D+ Y I C+ K+D+A DL + +G+ D+ Y +
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 664 LICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK-HLSN 705
+I + A + ++M + G P TY LI+ HL +
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 227/449 (50%), Gaps = 8/449 (1%)
Query: 255 EKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVV 314
E+GF F RN +SY + + + D+A+DLFR M + PTV + +
Sbjct: 43 ERGFSTF-------SDRN-LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRL 94
Query: 315 IFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGL 374
+ + + L +M ++G +++T +++I+C C+ K+ A + ++++ G
Sbjct: 95 FSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGY 154
Query: 375 FPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMS 434
P+ V +N L++G C E + AL+++D M P T N L+ G C V A+
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 435 LLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLC 494
L++ ++E P +TY ++ C+ G A ++L + E + D YS+ ID LC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 495 KRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSY 554
K G ++ A LF+ +E KG KA + Y LI G+C G+ DD LL M+ PN
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 555 TYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQM 614
T++ LID +E K++EA L+++M + G+ P TY LI+ KE + A +++D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 615 VSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLI 674
+S G PD+ T+ I YC ++D+ +L +M+ G++ ++VTY L+ + G +
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 675 YSAFDVLKRMFDAGCEPSHHTYAFLIKHL 703
A + + M P +Y L+ L
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 239/478 (50%)
Query: 229 IVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKR 288
++Q+ P + L + K E + M KG + + + +I+ C ++
Sbjct: 79 MIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 289 VDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTV 348
+ A ++ + P + ++ GLC R SEALE + M G +P + T
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 349 LIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNN 408
L++ LC KV +A L++RM+E G PN VTY +++ CK G A+++L M+ N
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 409 CSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAY 468
+A Y+ +I G CK ++ A +L NE+ + +ITYN+LI G C G D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 469 KVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGY 528
K+L + + + P+ T+SV ID+ K G++ EA L + ++GI + Y +LIDG+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 529 CKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTV 588
CKE ++++A +++ M+S C P+ T+N LI+G + ++ + L L +M+ GV
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 589 YTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVK 648
TY L++ + G + A +L +MVS ++PD+ +Y + C G+L++A ++ K
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 649 MNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
+ + + D Y ++I + + A+D+ + G + Y +I L K
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 209/403 (51%), Gaps = 11/403 (2%)
Query: 102 KPGFKHSVESYSSLLNLLIRNNFTK-ASEKIVFLMLKSCSLDK-EILFVLDFLRRVNESG 159
+ GF+ + +Y +LN++ ++ T A E + + ++ LD + ++D L +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 160 SEFSL--KLSVKG-------YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMI 210
+ F+L ++ +KG YNTL+ D+ ++ +M+ + PN+ TF+ +I
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 211 NGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCR 270
+ K G + EA+ + +++Q G++P+T TY SLI G+C+ +E+ ++ +M KGC
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 271 RNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEF 330
+ +++ LI+G C+A R+D+ L+LFR M TY ++ G C+ G+ A +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 331 FNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCK 390
F EM +R P++ +Y +L+D LC ++++A E+ ++ + + ++ Y +I G C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 391 EGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLIT 450
++ A + + +AR YN +I C++ ++ +A L ++ E+ +P +T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 451 YNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTL 493
YN LI + +A +++ + SG D T + I+ L
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 269 bits (687), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 265/520 (50%), Gaps = 13/520 (2%)
Query: 205 TFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVF-MM 263
T ++MI G+ E +S+I ++ + Y + +K +F M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 264 MPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDD----CRPTVRTYTVVIFGLC 319
+ + C+R+ S+ ++++ + L+ + + + P ++ +VI LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 320 RVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVV 379
++ A+E F M R C P+ +TY L+D LCKE ++DEA LL+ M +G P+ V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 380 TYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNEL 439
YN LIDG CK+G + +++D M C PN TYN LI G C + + +A+SLL +
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 440 LEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRV 499
+ P +TY +LI G ++ A ++L + E G +Q YSV I L K G+
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 500 EEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNAL 559
EEA L+ + +KG K V+Y+ L+DG C+EGK ++A +L RM++ CLPN+YTY++L
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 560 IDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGL 619
+ G ++ +EA+ + ++M K G + Y++LI+ + G A + +M+++G+
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 620 KPDVYTYTAFIQAYCSIGKLDEAEDLIVKM---NREGIVPDSVTYTLLICAYAHLGLIYS 676
KPD Y++ I+ C IG +D A L +M PD VTY +L+ I
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558
Query: 677 AFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDERKQQCD 716
A D+L M D GC+P T + LS E+ CD
Sbjct: 559 AVDLLNSMLDRGCDPDVITCNTFLNTLS-----EKSNSCD 593
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 251/543 (46%), Gaps = 44/543 (8%)
Query: 89 PQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFV 148
P A+D + + + K SV+S++S+LN++I
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRG-------------------- 167
Query: 149 LDFLRRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNT 208
L+F V S ++ + +N ++ L K VD V+ M + +P+ YT+ T
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 209 MINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKG 268
+++G CK + EA L + ++ G SP Y LI G C+ D+ + ++ M KG
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 269 CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEAL 328
C NEV+Y LIHGLC ++D+A+ L RM C P TY +I GL + R ++A+
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 329 EFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGY 388
+ M RG N H Y+VLI L KE K +EA L +M EKG PN+V Y+ L+DG
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 389 CKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTL 448
C+EG A +IL+ M ++ C PNA TY+ L+ GF K A+ + E+ + S
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 449 ITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDS 508
Y+ LI G C G + A V + G+ PD YS I LC G ++ A L+
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 509 L---EKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDG--- 562
+ E+ + V Y L+DG C + I A LL ML C P+ T N ++
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Query: 563 ------------------LYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDF 604
L + ++V A +VE M + P T+ +++ E+ K
Sbjct: 588 KSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647
Query: 605 DHA 607
+ A
Sbjct: 648 NAA 650
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 237/455 (52%), Gaps = 5/455 (1%)
Query: 192 LEMLDNMV----VPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILG 247
LE++D MV P + T N ++NG C G V +A L + ++V+ G P+ TY ++
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 248 YCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPT 307
C++ + M ++ + + V Y+ +I GLC+ +D A +LF M +
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 281
Query: 308 VRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLN 367
+ YT +I G C GR + + +M R P+V ++ LIDC KE K+ EA EL
Sbjct: 282 IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
M+++G+ P+ VTY +LIDG+CKE ++ A +LDLM S C PN RT+N LI G+CK
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
+ + L ++ + + +TYN+LI G C G L+ A ++ + + PD +Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 488 VFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSD 547
+ +D LC G E+A +F+ +EK ++ IY +I G C K+DDA L +
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 548 DCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHA 607
P+ TYN +I GL ++ + EA LL KM + G P TY ILI L EGD +
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 608 HRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEA 642
+L++++ G D T + S G+L ++
Sbjct: 582 AKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKS 615
Score = 262 bits (669), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 259/510 (50%)
Query: 199 VVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGF 258
+ N+YT + MIN CC+ + A + KI++ G PDT T+++LI G C V +
Sbjct: 103 IAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEAL 162
Query: 259 RVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGL 318
+ M + G + ++ L++GLC +V +A+ L RM E +P TY V+ +
Sbjct: 163 ELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM 222
Query: 319 CRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNV 378
C+ G+ + A+E +M R + + Y+++ID LCK+ +D A L N M KG ++
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 379 VTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNE 438
+ Y LI G+C G + ++L M +P+ ++ LI F K + A L E
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 439 LLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGR 498
++++ +SP +TY SLI G C+E LD A +L L+ G P+ T+++ I+ CK
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 499 VEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNA 558
+++ LF + +G+ A V Y LI G+C+ GK++ A L + M+S P+ +Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 559 LIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG 618
L+DGL + ++AL + EK+ K ++ + Y I+I + D A L + G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 619 LKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAF 678
+KPDV TY I C G L EA+ L KM +G P+ TY +LI A+ G +
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 679 DVLKRMFDAGCEPSHHTYAFLIKHLSNKKV 708
+++ + G T ++ LS+ ++
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 246/481 (51%)
Query: 201 PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRV 260
P+ TF+T+ING C G V EA V ++V+ G P T +L+ G C N V +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 261 FMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCR 320
M + G + NEV+Y ++ +C++ + A++L R+M E + Y+++I GLC+
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 321 VGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVT 380
G A FNEM +G + ++ YT LI C + D+ ++LL M+++ + P+VV
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 381 YNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELL 440
++ALID + KEG + A ++ M SP+ TY LI GFCK + +A +L+ ++
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 441 EQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVE 500
+ P + T+N LI G C+ +D ++ ++ G+V D TY+ I C+ G++E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 501 EAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALI 560
A+ LF + + ++ V Y L+DG C G+ + A + E++ + YN +I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 561 DGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLK 620
G+ KV +A L + GVKP V TY I+I + K+G A L +M G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 621 PDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDV 680
P+ TY I+A+ G ++ LI ++ R G D+ T +++ + L S D+
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDM 619
Query: 681 L 681
L
Sbjct: 620 L 620
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 232/442 (52%), Gaps = 2/442 (0%)
Query: 271 RNEVSY-TNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALE 329
+ +VSY L G+ + K D+A+DLF+ M RP + ++ + + R + L+
Sbjct: 35 KGKVSYRERLRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD 93
Query: 330 FFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYC 389
+M +G N++T +++I+C C+ K+ A + ++++ G P+ VT++ LI+G C
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 390 KEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLI 449
EG + AL+++D M P T N L+ G C V A+ L++ ++E P +
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 450 TYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSL 509
TY ++ C+ G A ++L + E + D YS+ ID LCK G ++ A LF+ +
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 510 EKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKV 569
E KG KA +IYT LI G+C G+ DD LL M+ P+ ++ALID +E K+
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 570 QEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAF 629
+EA L ++M + G+ P TYT LI+ KE D A+ +LD MVS G P++ T+
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 630 IQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGC 689
I YC +D+ +L KM+ G+V D+VTY LI + LG + A ++ + M
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 690 EPSHHTYAFLIKHLSNKKVDER 711
P +Y L+ L + E+
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEK 475
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 233/471 (49%)
Query: 236 PDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDL 295
P ++ L R K + + M KG N + + +I+ C +++ A
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 296 FRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCK 355
++ + P T++ +I GLC GR SEALE + M G +P + T L++ LC
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 356 ENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNART 415
KV +A L++RM+E G PN VTY ++ CK G A+++L M+ +A
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 416 YNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLIN 475
Y+ +I G CK ++ A +L NE+ + +I Y +LI G C G D K+L +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 476 ESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKID 535
+ + PD +S ID K G++ EA+ L + ++GI V YT+LIDG+CKE ++D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 536 DAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILI 595
A+ +L+ M+S C PN T+N LI+G + + + L L KM+ GV TY LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 596 EEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIV 655
+ + G + A L +MVS ++PD+ +Y + C G+ ++A ++ K+ + +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 656 PDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
D Y ++I + + A+D+ + G +P TY +I L K
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
+++ +N L+ K +L+D+ ++ +M VV + T+NT+I G C++G + A+
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
++V + PD +Y L+ G C N + EK +F + K + Y +IHG+C A
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
+VD+A DLF + +P V+TY ++I GLC+ G SEA F +M G PN TY
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALID 386
+LI E ++++L+ + G + T ++D
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 164 LKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAE 223
++L + YN ++ + VD+ ++ + V P++ T+N MI G CK G++ EA+
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 224 LYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGL 283
L K+ + G SP+ TY LI + D K ++ + + G + + ++ L
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Query: 284 CEAKRVDEALDLF 296
+ + LD+
Sbjct: 608 SDGRLKKSFLDML 620
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 255/533 (47%), Gaps = 62/533 (11%)
Query: 201 PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRV 260
P++Y +N ++ C K V +V G++P T+T+ LI
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLI--------------- 154
Query: 261 FMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCR 320
LC++ VD A +LF M E C+P T+ +++ G C+
Sbjct: 155 --------------------RALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 321 VGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVT 380
G + LE N M + G PN Y ++ C+E + D++ +++ +M E+GL P++VT
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 381 YNALIDGYCKEGLMEAALQILDLMKSNNC----SPNARTYNELICGFCKRKNVHRAMSLL 436
+N+ I CKEG + A +I M+ + PN+ TYN ++ GFCK + A +L
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 437 NELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKR 496
+ E + +L +YN + G R G A VL + + G+ P ++Y++ +D LCK
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
Query: 497 GRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTY 556
G + +A+ + +++ G+ V Y L+ GYC GK+D A SLL+ M+ ++CLPN+YT
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC 434
Query: 557 NALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLL----- 611
N L+ L++ ++ EA L+ KM + G T I+++ + G+ D A ++
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 612 ------------------DQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREG 653
D ++ PD+ TY+ + C G+ EA++L +M E
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 654 IVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
+ PDSV Y + I + G I SAF VLK M GC S TY LI L K
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607
Score = 252 bits (643), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 166/587 (28%), Positives = 289/587 (49%), Gaps = 61/587 (10%)
Query: 160 SEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNM----VVPNIYTFNTMINGCCK 215
+EF+ + V+GY K L D+ LE+L+ M V+PN +NT+++ C+
Sbjct: 181 NEFTFGILVRGY-------CKAGLTDK----GLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 216 VGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVF--------MMMPKK 267
G ++E V K+ + GL PD T+ S I C+ V R+F + +P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP-- 287
Query: 268 GCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEA 327
R N ++Y ++ G C+ +++A LF + E+D ++++Y + + GL R G+ EA
Sbjct: 288 --RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 328 LEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDG 387
+M+ +G P++++Y +L+D LCK + +A ++ M G+ P+ VTY L+ G
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 388 YCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPT 447
YC G ++AA +L M NNC PNA T N L+ K + A LL ++ E+
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 448 LITYNSLIYGQCREGHLDSAYKVLHLIN-----------------------ESGLVPDQF 484
+T N ++ G C G LD A +++ + E+ +PD
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 485 TYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERM 544
TYS ++ LCK GR EA+ LF + + ++ V Y I +CK+GKI A +L+ M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 545 LSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDF 604
C + TYN+LI GL + ++ E L+++M + G+ P + TY I+ + +
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 605 DHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI-----VKMNREGIVPDSV 659
+ A LLD+M+ + P+V+++ I+A+C + D A+++ + +EG+
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL----- 700
Query: 660 TYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
Y+L+ G + A ++L+ + D G E Y L++ L K
Sbjct: 701 -YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 226/476 (47%), Gaps = 26/476 (5%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S++ YN L L + E + V +M D + P+IY++N +++G CK+G + +A+ V
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
+ + G+ PD TY L+ GYC V+ + M + C N + L+H L +
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARG-------- 338
R+ EA +L R+M E T +++ GLC G +A+E M G
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 339 ---------------CEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNA 383
C P++ TY+ L++ LCK + EA L M+ + L P+ V YN
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Query: 384 LIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQN 443
I +CK+G + +A ++L M+ C + TYN LI G + + L++E+ E+
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKG 624
Query: 444 LSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQ 503
+SP + TYN+ I C ++ A +L + + + P+ F++ I+ CK + AQ
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684
Query: 504 VLFD-SLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDG 562
+F+ ++ G K G +Y+ + + G++ A LLE +L ++ Y L++
Sbjct: 685 EVFETAVSICGQKEG--LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742
Query: 563 LYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG 618
L ++ +++ A ++ KM G +I+ + K G+ A+ D+M+ +
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMA 798
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/492 (30%), Positives = 249/492 (50%), Gaps = 7/492 (1%)
Query: 214 CKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNE 273
C+ GN E+ + +V+ G +PD T LI G+ +++ K RV ++ K G + +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 274 VSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNE 333
+Y LI+G C+ R+D+A + RM D P TY ++I LC G+ AL+ N+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 334 MSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGL 393
+ + C+P V TYT+LI+ E VDEA +L++ ML +GL P++ TYN +I G CKEG+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 394 MEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNS 453
++ A +++ ++ C P+ +YN L+ + L+ ++ + P ++TY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 454 LIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKG 513
LI CR+G ++ A +L L+ E GL PD ++Y I C+ GR++ A +++ G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 514 IKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEAL 573
V Y ++ CK GK D A + ++ C PNS +YN + L+ AL
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 574 LLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAY 633
++ +M G+ P TY +I + +EG D A LL M S P V TY + +
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 634 CSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRM--FDAGCEP 691
C ++++A +++ M G P+ TYT+LI G A ++ + DA E
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578
Query: 692 S----HHTYAFL 699
S H T+ L
Sbjct: 579 SFKRLHRTFPLL 590
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/459 (32%), Positives = 236/459 (51%), Gaps = 7/459 (1%)
Query: 192 LEMLDNMVV----PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILG 247
L +L+ MV P++ +I G + N+ +A + V +I++ PD F Y +LI G
Sbjct: 109 LHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA-VRVMEILEKFGQPDVFAYNALING 167
Query: 248 YCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPT 307
+C+ ++ RV M K + V+Y +I LC ++D AL + ++ D+C+PT
Sbjct: 168 FCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPT 227
Query: 308 VRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLN 367
V TYT++I G EAL+ +EM +RG +P++ TY +I +CKE VD A E++
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
+ KG P+V++YN L+ +G E +++ M S C PN TY+ LI C+
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
+ AM+LL + E+ L+P +Y+ LI CREG LD A + L + G +PD Y+
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 488 VFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEG-KIDDAHSLLERMLS 546
+ TLCK G+ ++A +F L + G Y + G KI H +LE M+S
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE-MMS 466
Query: 547 DDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDH 606
+ P+ TYN++I L RE V EA L+ M P+V TY I++ K +
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 607 AHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDL 645
A +L+ MV G +P+ TYT I+ G EA +L
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 230/455 (50%), Gaps = 6/455 (1%)
Query: 169 KGYNTLLMQLSK-----FHLVDEMKRV-YLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA 222
KGYN ++ +K F L + K V +E+L+ P+++ +N +ING CK+ + +A
Sbjct: 118 KGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDA 177
Query: 223 ELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHG 282
+ ++ SPDT TY +I C ++ +V + C+ ++YT LI
Sbjct: 178 TRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEA 237
Query: 283 LCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
VDEAL L M +P + TY +I G+C+ G A E + +GCEP+
Sbjct: 238 TMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPD 297
Query: 343 VHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILD 402
V +Y +L+ L + K +E +L+ +M + PNVVTY+ LI C++G +E A+ +L
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 403 LMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREG 462
LMK +P+A +Y+ LI FC+ + A+ L ++ P ++ YN+++ C+ G
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 463 HLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYT 522
D A ++ + E G P+ +Y+ L G A + + GI E+ Y
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 523 ALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKM 582
++I C+EG +D+A LL M S + P+ TYN ++ G + ++++A+ ++E M
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 583 GVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSL 617
G +P TYT+LIE + G A L + +V +
Sbjct: 538 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 204/393 (51%), Gaps = 2/393 (0%)
Query: 319 CRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNV 378
CR G E+L M +G P+V T LI + +A ++ +LEK P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 379 VTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNE 438
YNALI+G+CK ++ A ++LD M+S + SP+ TYN +I C R + A+ +LN+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 439 LLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGR 498
LL N PT+ITY LI EG +D A K++ + GL PD FTY+ I +CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 499 VEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNA 558
V+ A + +LE KG + + Y L+ +GK ++ L+ +M S+ C PN TY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 559 LIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG 618
LI L R+ K++EA+ L++ M + G+ P Y+Y LI +EG D A L+ M+S G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 619 LKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAF 678
PD+ Y + C GK D+A ++ K+ G P+S +Y + A G A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 679 DVLKRMFDAGCEPSHHTYAFLIKHLSNKK-VDE 710
++ M G +P TY +I L + VDE
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 212/418 (50%), Gaps = 6/418 (1%)
Query: 168 VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVS 227
V YN L+ K + +D+ RV M P+ T+N MI C G + A ++
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 228 KIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAK 287
+++ P TYT LI V++ ++ M +G + + +Y +I G+C+
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 288 RVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYT 347
VD A ++ R + C P V +Y +++ L G+ E + +M + C+PNV TY+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 348 VLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSN 407
+LI LC++ K++EA LL M EKGL P+ +Y+ LI +C+EG ++ A++ L+ M S+
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 408 NCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSA 467
C P+ YN ++ CK +A+ + +L E SP +YN++ G
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG---DK 454
Query: 468 YKVLHLINE---SGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTAL 524
+ LH+I E +G+ PD+ TY+ I LC+ G V+EA L + V Y +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 525 IDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKM 582
+ G+CK +I+DA ++LE M+ + C PN TY LI+G+ EA+ L + ++
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 140/258 (54%), Gaps = 2/258 (0%)
Query: 454 LIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKG 513
+ + CR G+ + +L + G PD + I + +A + + LEK G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 514 IKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEAL 573
+ Y ALI+G+CK +IDDA +L+RM S D P++ TYN +I L K+ AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 574 LLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAY 633
++ ++ +PTV TYTILIE + EG D A +L+D+M+S GLKPD++TY I+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 634 CSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSH 693
C G +D A +++ + +G PD ++Y +L+ A + G ++ +MF C+P+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 694 HTYAFLIKHL-SNKKVDE 710
TY+ LI L + K++E
Sbjct: 334 VTYSILITTLCRDGKIEE 351
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 133/308 (43%), Gaps = 48/308 (15%)
Query: 168 VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVS 227
V YN LL L +E +++ +M PN+ T++ +I C+ G + EA +
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 228 KIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAK 287
+ + GL+PD ++Y LI +CR ++ M GC + V+Y ++ LC+
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 288 RVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYT 347
+ D+AL++F ++GE C P +Y + L G K AL EM + G +P+ TY
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 348 VLIDCLCKENKVDEASELL-----------------------------------NRMLEK 372
+I CLC+E VDEA ELL M+
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 373 GLFPNVVTYNALIDGYCKEGLMEAALQIL-DLMKSNNCSPNARTYNELICGFCKRKNVHR 431
G PN TY LI+G G A+++ DL++ + S + K +HR
Sbjct: 538 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYS------------FKRLHR 585
Query: 432 AMSLLNEL 439
LLN L
Sbjct: 586 TFPLLNVL 593
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
Query: 494 CKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNS 553
C+ G E+ L +++ +KG ++ T LI G+ I A ++E +L P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158
Query: 554 YTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQ 613
+ YNALI+G + ++ +A ++++M P TY I+I + G D A ++L+Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 614 MVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGL 673
++S +P V TYT I+A G +DEA L+ +M G+ PD TY +I G+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 674 IYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDERKQQCDGILFGFKC 724
+ AF++++ + GCEP +Y L++ L N+ E ++ +F KC
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 259 bits (661), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 158/535 (29%), Positives = 275/535 (51%), Gaps = 2/535 (0%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S + Y ++++ K +D+ R+ EML + + N+ ++I G CK ++ A +
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLF 362
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
K+ + G SP++ T++ LI + +N ++EK + M G + +I G +
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
++ +EAL LF E V ++ LC+ G+ EA E ++M +RG PNV +Y
Sbjct: 423 QKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
++ C++ +D A + + +LEKGL PN TY+ LIDG + + AL++++ M S
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQN-LSPTLITYNSLIYGQCREGHLD 465
+N N Y +I G CK +A LL ++E+ L + ++YNS+I G +EG +D
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 466 SAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALI 525
SA + +G+ P+ TY+ ++ LCK R+++A + D ++ KG+K Y ALI
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Query: 526 DGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVK 585
DG+CK ++ A +L +L + P+ YN+LI G + AL L +KM K G++
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Query: 586 PTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDL 645
+ TYT LI+ +LK+G+ A L +M ++GL PD YT + G+ + +
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Query: 646 IVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
+M + + P+ + Y +I + G + AF + M D G P T+ L+
Sbjct: 782 FEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 185/675 (27%), Positives = 321/675 (47%), Gaps = 38/675 (5%)
Query: 53 ILSTHPTTWQRHTSITKLIPLLSPSHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESY 112
IL + P T+ R + + LI +S S+ + + S+ ++ S+ GF+ + ++
Sbjct: 115 ILVSSPETYGRASDL--LIRYVSTSNPTPMASVLVSKLVDSAKSF------GFEVNSRAF 166
Query: 113 SSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFLRRVNESGSEFS--------- 163
+ LLN ++ T + IV ML+ L V+ F VN + S
Sbjct: 167 NYLLNAYSKDRQTDHAVDIVNQMLE--------LDVIPFFPYVNRTLSALVQRNSLTEAK 218
Query: 164 ------LKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVV----PNIYTFNTMINGC 213
+ + V G N L + L +E LE+L + P+ ++ + C
Sbjct: 219 ELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQAC 278
Query: 214 CKVGNVGEAELYVSKIVQAGL-SPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRN 272
CK ++ A + ++ + L P TYTS+IL + +++ R+ M G N
Sbjct: 279 CKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMN 338
Query: 273 EVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFN 332
V+ T+LI G C+ + AL LF +M ++ P T++V+I + G +ALEF+
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 333 EMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEG 392
+M G P+V +I K K +EA +L + E GL NV N ++ CK+G
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQG 457
Query: 393 LMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYN 452
+ A ++L M+S PN +YN ++ G C++KN+ A + + +LE+ L P TY+
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 453 SLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEA-QVLFDSLEK 511
LI G R +A +V++ + S + + Y I+ LCK G+ +A ++L + +E+
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 512 KGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQE 571
K + + Y ++IDG+ KEG++D A + E M + PN TY +L++GL + ++ +
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQ 637
Query: 572 ALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQ 631
AL + ++M GVK + Y LI+ K + + A L +++ GL P Y + I
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Query: 632 AYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEP 691
+ ++G + A DL KM ++G+ D TYT LI G + A ++ M G P
Sbjct: 698 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVP 757
Query: 692 SHHTYAFLIKHLSNK 706
Y ++ LS K
Sbjct: 758 DEIIYTVIVNGLSKK 772
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 210/393 (53%), Gaps = 3/393 (0%)
Query: 172 NTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQ 231
NT+L L K DE + +M + PN+ ++N ++ G C+ N+ A + S I++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 232 AGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDE 291
GL P+ +TY+ LI G RN D + V M N V Y +I+GLC+ + +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 292 ALDLFRRMGEDD--CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVL 349
A +L M E+ C + +Y +I G + G A+ + EM G PNV TYT L
Sbjct: 567 ARELLANMIEEKRLC-VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 350 IDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNC 409
++ LCK N++D+A E+ + M KG+ ++ Y ALIDG+CK ME+A + +
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 410 SPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYK 469
+P+ YN LI GF N+ A+ L ++L+ L L TY +LI G ++G+L A +
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 470 VLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYC 529
+ + GLVPD+ Y+V ++ L K+G+ + +F+ ++K + +IY A+I G+
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 530 KEGKIDDAHSLLERMLSDDCLPNSYTYNALIDG 562
+EG +D+A L + ML LP+ T++ L+ G
Sbjct: 806 REGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 1/289 (0%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLD-NMVVPNIYTFNTMINGCCKVGNVGEAELYVSKI 229
Y T++ L K + + + M++ + + ++N++I+G K G + A ++
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 230 VQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRV 289
G+SP+ TYTSL+ G C+N +++ + M KG + + +Y LI G C+ +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 290 DEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVL 349
+ A LF + E+ P+ Y +I G +G AL+ + +M G ++ TYT L
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 350 IDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNC 409
ID L K+ + ASEL M GL P+ + Y +++G K+G +++ + MK NN
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 410 SPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQ 458
+PN YN +I G + N+ A L +E+L++ + P T++ L+ GQ
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQ 839
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 141/275 (51%)
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
E L +S YN+++ K +D Y EM N + PN+ T+ +++NG CK +
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
+A ++ G+ D Y +LI G+C+ ++E +F + ++G ++ Y +LI
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
G + ALDL+++M +D R + TYT +I GL + G A E + EM A G
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
P+ YTV+++ L K+ + + ++ M + + PNV+ YNA+I G+ +EG ++ A ++
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSL 435
D M P+ T++ L+ G RA SL
Sbjct: 817 HDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 273/537 (50%), Gaps = 12/537 (2%)
Query: 169 KGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSK 228
+ Y +L+ + V + + +EM +V + YT+ T++ G C G++ A V +
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 229 IVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKR 288
++ +G P+ YT+LI + +N RV M ++G + Y +LI GL +AKR
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 289 VDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTV 348
+DEA M E+ +P TY I G + A ++ EM G PN T
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 349 LIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNN 408
LI+ CK+ KV EA M+++G+ + TY L++G K ++ A +I M+
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 409 CSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAY 468
+P+ +Y LI GF K N+ +A S+ +E++E+ L+P +I YN L+ G CR G ++ A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 469 KVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGY 528
++L ++ GL P+ TY ID CK G + EA LFD ++ KG+ +YT L+DG
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 529 CKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQ---EAL--LLVEKMTKMG 583
C+ ++ A ++ C ++ +NALI+ +++ K + E L L+ + G
Sbjct: 743 CRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 584 VKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAE 643
KP TY I+I+ + KEG+ + A L QM + L P V TYT+ + Y +G+ E
Sbjct: 802 -KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 644 DLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMF-----DAGCEPSHHT 695
+ + GI PD + Y+++I A+ G+ A ++ +MF D GC+ S T
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 263/549 (47%), Gaps = 21/549 (3%)
Query: 173 TLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNV--GEAELYVSK-- 228
LL L +++ +D VY M++ VV ++ T++ +I C+ GNV G+ L+ ++
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 229 -----------------IVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRR 271
++ GL P +TY LI G C+ K +E + + M G
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 272 NEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFF 331
+ +Y+ LI GL + + D A L M Y I + + G +A F
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 332 NEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKE 391
+ M A G P Y LI+ C+E V + ELL M ++ + + TY ++ G C
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 392 GLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITY 451
G ++ A I+ M ++ C PN Y LI F + AM +L E+ EQ ++P + Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 452 NSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEK 511
NSLI G + +D A L + E+GL P+ FTY FI + A + +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 512 KGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQE 571
G+ +V+ T LI+ YCK+GK+ +A S M+ L ++ TY L++GL++ KV +
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 572 ALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQ 631
A + +M G+ P V++Y +LI K G+ A + D+MV GL P+V Y +
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 632 AYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEP 691
+C G++++A++L+ +M+ +G+ P++VTY +I Y G + AF + M G P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 692 SHHTYAFLI 700
Y L+
Sbjct: 731 DSFVYTTLV 739
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 246/473 (52%), Gaps = 10/473 (2%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
YN+L++ LSK +DE + +EM++N + PN +T+ I+G + A+ YV ++
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
+ G+ P+ T LI YC+ V + + M +G + +YT L++GL + +VD
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLI 350
+A ++FR M P V +Y V+I G ++G +A F+EM G PNV Y +L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 351 DCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCS 410
C+ ++++A ELL+ M KGL PN VTY +IDGYCK G + A ++ D MK
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 411 PNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKV 470
P++ Y L+ G C+ +V RA+++ ++ + + +N+LI + G + +V
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 471 LHLINESGL----VPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
L+ + + P+ TY++ ID LCK G +E A+ LF ++ + + YT+L++
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKM-----TK 581
GY K G+ + + + ++ P+ Y+ +I+ +E +AL+LV++M
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 582 MGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYC 634
G K ++ T L+ K G+ + A ++++ MV L PD T I C
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 243/520 (46%), Gaps = 1/520 (0%)
Query: 184 VDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTS 243
VD ++ M+ +VP YT++ +I+G CK+ + +A+ + ++ G+S D TY+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 244 LILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDD 303
LI G + ++ + + M G Y I + + +++A LF M
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 304 CRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEAS 363
P + Y +I G CR + E EM R + +TY ++ +C +D A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 364 ELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGF 423
++ M+ G PNVV Y LI + + A+++L MK +P+ YN LI G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 424 CKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQ 483
K K + A S L E++E L P TY + I G SA K + + E G++P++
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 484 FTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLER 543
+ I+ CK+G+V EA + S+ +GI YT L++G K K+DDA +
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 544 MLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGD 603
M P+ ++Y LI+G + +Q+A + ++M + G+ P V Y +L+ + G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 604 FDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTL 663
+ A LLD+M GL P+ TY I YC G L EA L +M +G+VPDS YT
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 664 LICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL 703
L+ L + A + GC S + LI +
Sbjct: 738 LVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWV 776
Score = 235 bits (600), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 253/537 (47%), Gaps = 5/537 (0%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
Y+ L+ L K +++ K + +EM V + +T++ +I+G K N A+ V ++V
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
G++ + Y I + +EK +F M G +Y +LI G C K V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLI 350
+ +L M + + + TY V+ G+C G A EM A GC PNV YT LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 351 DCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCS 410
+ ++ +A +L M E+G+ P++ YN+LI G K M+ A L M N
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 411 PNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKV 470
PNA TY I G+ + A + E+ E + P + LI C++G + A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 471 LHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCK 530
+ + G++ D TY+V ++ L K +V++A+ +F + KGI Y LI+G+ K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 531 EGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYT 590
G + A S+ + M+ + PN YN L+ G R ++++A L+++M+ G+ P T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 591 YTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMN 650
Y +I+ K GD A RL D+M GL PD + YT + C + ++ A I N
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTN 758
Query: 651 REGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRM----FDAGCEPSHHTYAFLIKHL 703
++G + + LI G +VL R+ FD +P+ TY +I +L
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 236/530 (44%), Gaps = 68/530 (12%)
Query: 233 GLSPDTFTYTSLILGYCRNKDVEKGFRVFM------MMPKKGCRRNEVSYTNLIHGLCEA 286
G S D + L GY +E+ VF ++P+ R +V L+ L
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPR--LSRCKV----LLDALLRW 199
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGR---------KSE----------- 326
R+D D+++ M E + V+TY ++I CR G K+E
Sbjct: 200 NRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVD 259
Query: 327 -ALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALI 385
AL+ M +G P +TY VLID LCK ++++A LL M G+ + TY+ LI
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 386 DG-----------------------------------YCKEGLMEAALQILDLMKSNNCS 410
DG KEG+ME A + D M ++
Sbjct: 320 DGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Query: 411 PNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKV 470
P A+ Y LI G+C+ KNV + LL E+ ++N+ + TY +++ G C G LD AY +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 471 LHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCK 530
+ + SG P+ Y+ I T + R +A + ++++GI Y +LI G K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 531 EGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYT 590
++D+A S L M+ + PN++TY A I G + A V++M + GV P
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 591 YTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMN 650
T LI E K+G A MV G+ D TYT + K+D+AE++ +M
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 651 REGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
+GI PD +Y +LI ++ LG + A + M + G P+ Y L+
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 231/538 (42%), Gaps = 86/538 (15%)
Query: 275 SYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVI---------------FGL- 318
S++ L LC ++AL + RM E + P ++ ++ FG+
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIVRCSQEFVGKSDDGVLFGIL 157
Query: 319 ----CRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGL 374
G EA+ F+ P + VL+D L + N++D ++ M+E+ +
Sbjct: 158 FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 375 FPNVVTYNALIDGYCKEGLME---------------------AALQILDLMKSNNCSPNA 413
+V TY+ LI +C+ G ++ AL++ + M P
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 414 RTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHL 473
TY+ LI G CK K + A SLL E+ +S TY+ LI G + + D+A ++H
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 474 INESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKE-- 531
+ G+ + Y I + K G +E+A+ LFD + G+ Y +LI+GYC+E
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 532 ---------------------------------GKIDDAHSLLERMLSDDCLPNSYTYNA 558
G +D A+++++ M++ C PN Y
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 559 LIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG 618
LI + + +A+ ++++M + G+ P ++ Y LI + K D A L +MV G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 619 LKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAF 678
LKP+ +TY AFI Y + A+ + +M G++P+ V T LI Y G + A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 679 DVLKRMFDAGCEPSHHTYAFLIKHL-SNKKVDE-----RKQQCDGI---LFGFKCLIS 727
+ M D G TY L+ L N KVD+ R+ + GI +F + LI+
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 172/382 (45%), Gaps = 47/382 (12%)
Query: 169 KGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSK 228
K Y L+ L K VD+ + ++ EM + P+++++ +ING K+GN+ +A +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 229 IVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKR 288
+V+ GL+P+ Y L+ G+CR+ ++EK + M KG N V+Y +I G C++
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 289 VDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGC--------- 339
+ EA LF M P YT ++ G CR+ A+ F + +GC
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNA 771
Query: 340 ------------------------------EPNVHTYTVLIDCLCKENKVDEASELLNRM 369
+PN TY ++ID LCKE ++ A EL ++M
Sbjct: 772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Query: 370 LEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNV 429
L P V+TY +L++GY K G + D + P+ Y+ +I F K
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 430 HRAMSLLNELLEQNLSP-----TLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQF 484
+A+ L++++ +N ++ T +L+ G + G ++ A KV+ + +PD
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Query: 485 TYSVFIDTLC--KRGRVEEAQV 504
T I+ C RVE V
Sbjct: 952 TVIELINESCISSNQRVEADAV 973
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 193/457 (42%), Gaps = 76/457 (16%)
Query: 320 RVGRKSEALEFFNEM-SARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEK------ 372
RV S+ L FFN + S + E + +++ L LC ++A ++ RM+E+
Sbjct: 73 RVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAE 132
Query: 373 -------------GLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNEL 419
G + V + L DGY +G +E A+ + P L
Sbjct: 133 VWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVL 192
Query: 420 ICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHL--------------- 464
+ + + + ++E+N+ + TY+ LI CR G++
Sbjct: 193 LDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252
Query: 465 ------DSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGE 518
D A K+ + GLVP ++TY V ID LCK R+E+A+ L ++ G+
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN 312
Query: 519 VIYTALIDG-----------------------------------YCKEGKIDDAHSLLER 543
Y+ LIDG KEG ++ A +L +
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 544 MLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGD 603
M++ +P + Y +LI+G RE+ V++ L+ +M K + + YTY +++ + GD
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 604 FDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTL 663
D A+ ++ +M++ G +P+V YT I+ + + +A ++ +M +GI PD Y
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 664 LICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
LI + + A L M + G +P+ TY I
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 237/455 (52%), Gaps = 8/455 (1%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ +N LL + K D + + +M + ++YTFN +IN C V A +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
K+++ G PD T SL+ G+CR V + M + G + + V+Y +I LC+
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
KRV++A D F+ + RP V TYT ++ GLC R S+A ++M + PNV TY
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+ L+D K KV EA EL M+ + P++VTY++LI+G C ++ A Q+ DLM S
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
C + +YN LI GFCK K V M L E+ ++ L +TYN+LI G + G +D
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A + ++ G+ PD +TY++ + LC G +E+A V+F+ ++K+ + V YT +I
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G CK GK+++A SL + P+ TY ++ GL + + E L KM + G+
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKP 621
T L +GD + L+ +M+S G P
Sbjct: 504 NDCT--------LSDGDITLSAELIKKMLSCGYAP 530
Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 223/441 (50%), Gaps = 12/441 (2%)
Query: 256 KGFRVFMMMPKK----GCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTY 311
K + V + + KK G R + ++ +I+ C +V AL + +M + P T
Sbjct: 99 KKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTI 158
Query: 312 TVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLE 371
++ G CR R S+A+ ++M G +P++ Y +ID LCK +V++A + +
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 372 KGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHR 431
KG+ PNVVTY AL++G C A ++L M +PN TY+ L+ F K V
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 432 AMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFID 491
A L E++ ++ P ++TY+SLI G C +D A ++ L+ G + D +Y+ I+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 492 TLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLP 551
CK RVE+ LF + ++G+ + V Y LI G+ + G +D A +M P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 552 NSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLL 611
+ +TYN L+ GL ++++AL++ E M K + + TYT +I + K G + A L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 612 DQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHL 671
+ GLKPD+ TYT + C+ G L E E L KM +EG++ + T +
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------D 510
Query: 672 GLIYSAFDVLKRMFDAGCEPS 692
G I + +++K+M G PS
Sbjct: 511 GDITLSAELIKKMLSCGYAPS 531
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 216/419 (51%)
Query: 288 RVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYT 347
++++A+DLF M + P++ + ++ + ++ + + +M G +++T+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 348 VLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSN 407
++I+C C +V A +L +ML+ G P+ VT +L++G+C+ + A+ ++D M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 408 NCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSA 467
P+ YN +I CK K V+ A E+ + + P ++TY +L+ G C A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 468 YKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDG 527
++L + + + P+ TYS +D K G+V EA+ LF+ + + I V Y++LI+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 528 YCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPT 587
C +ID+A+ + + M+S CL + +YN LI+G + ++V++ + L +M++ G+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 588 VYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIV 647
TY LI+ + GD D A QM G+ PD++TY + C G+L++A +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 648 KMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
M + + D VTYT +I G + A+ + + G +P TY ++ L K
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 180/351 (51%)
Query: 355 KENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNAR 414
++ K+++A +L + M++ FP++V +N L+ K + + + M+ +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 415 TYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLI 474
T+N +I FC V A+S+L ++L+ P +T SL+ G CR + A ++ +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 475 NESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKI 534
E G PD Y+ ID+LCK RV +A F +E+KGI+ V YTAL++G C +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 535 DDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTIL 594
DA LL M+ PN TY+AL+D + KV EA L E+M +M + P + TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 595 IEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGI 654
I + D A+++ D MVS G DV +Y I +C ++++ L +M++ G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 655 VPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSN 705
V ++VTY LI + G + A + +M G P TY L+ L +
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 163/327 (49%)
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
E K + YN ++ L K V++ + E+ + PN+ T+ ++NG C
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
+A +S +++ ++P+ TY++L+ + +N V + +F M + + V+Y++LI
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
+GLC R+DEA +F M C V +Y +I G C+ R + ++ F EMS RG
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
N TY LI + VD+A E ++M G+ P++ TYN L+ G C G +E AL I
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCR 460
+ M+ + TY +I G CK V A SL L + L P ++TY +++ G C
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 461 EGHLDSAYKVLHLINESGLVPDQFTYS 487
+G L + + + GL+ + T S
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 140/279 (50%)
Query: 429 VHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSV 488
++ A+ L +++++ P+++ +N L+ + D + + G+ D +T+++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 489 FIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDD 548
I+ C +V A + + K G + V +L++G+C+ ++ DA SL+++M+
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 549 CLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAH 608
P+ YNA+ID L + ++V +A +++ + G++P V TYT L+ + + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 609 RLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAY 668
RLL M+ + P+V TY+A + A+ GK+ EA++L +M R I PD VTY+ LI
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 669 AHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKK 707
I A + M GC +Y LI K
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 154/304 (50%), Gaps = 23/304 (7%)
Query: 102 KPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFLR------RV 155
K +V +YS+LL+ ++N ++++ M++ S+D +I+ + R+
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM-SIDPDIVTYSSLINGLCLHDRI 311
Query: 156 NESGSEFSLKLS------VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTM 209
+E+ F L +S V YNTL+ K V++ +++ EM +V N T+NT+
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 210 INGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGC 269
I G + G+V +A+ + S++ G+SPD +TY L+ G C N ++EK +F M K+
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 270 RRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALE 329
+ V+YT +I G+C+ +V+EA LF + +P + TYT ++ GLC G E
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 330 FFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYC 389
+ +M G N DC + + ++EL+ +ML G P+++ + G C
Sbjct: 492 LYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLL--KDIKSGVC 541
Query: 390 KEGL 393
K+ L
Sbjct: 542 KKAL 545
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 1/258 (0%)
Query: 460 REGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEV 519
R+ L+ A + + +S P ++ + + K + + L +E GI+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 520 IYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKM 579
+ +I+ +C ++ A S+L +ML P+ T +L++G R +V +A+ LV+KM
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 580 TKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKL 639
++G KP + Y +I+ + K + A ++ G++P+V TYTA + C+ +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 640 DEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFL 699
+A L+ M ++ I P+ +TY+ L+ A+ G + A ++ + M +P TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 700 IKHLS-NKKVDERKQQCD 716
I L + ++DE Q D
Sbjct: 302 INGLCLHDRIDEANQMFD 319
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 251/537 (46%), Gaps = 23/537 (4%)
Query: 190 VYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYC 249
+Y +M + NIY+FN +I C + + K+ + G PD T+ +L+ G C
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 250 RNKD-----------VEKGF----RVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALD 294
VE GF +F M + G +++ LI+GLC RV EA
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 295 LFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLC 354
L +M V TY ++ G+C++G AL ++M +P+V Y+ +ID LC
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 355 KENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNAR 414
K+ +A L + MLEKG+ PNV TYN +IDG+C G A ++L M +P+
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 415 TYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLI 474
T+N LI K + A L +E+L + + P +TYNS+IYG C+ D A + L+
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 475 NESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKI 534
PD T++ ID C+ RV+E L + ++G+ A Y LI G+C+ +
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 535 DDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTIL 594
+ A L + M+S P++ T N L+ G K++EAL L E + + Y I+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 595 IEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGI 654
I + K D A L + G++PDV TY I +C + +A L KM G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 655 VPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSNKKVDER 711
PD+ TY LI G I + +++ M G AF IK +++ D R
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD----AFTIKMVADLITDGR 656
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 233/457 (50%), Gaps = 5/457 (1%)
Query: 186 EMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLI 245
E ++ +M++ + P + TFNT+ING C G V EA V+K+V GL D TY +++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 246 LGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCR 305
G C+ D + + M + + + V Y+ +I LC+ +A LF M E
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 306 PTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASEL 365
P V TY +I G C GR S+A +M R P+V T+ LI KE K+ EA +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 366 LNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCK 425
+ ML + +FP+ VTYN++I G+CK + A + DLM SP+ T+N +I +C+
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCR 444
Query: 426 RKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFT 485
K V M LL E+ + L TYN+LI+G C +L++A + + G+ PD T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 486 YSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERML 545
++ + C+ ++EEA LF+ ++ I V Y +I G CK K+D+A L +
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 546 SDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFD 605
P+ TYN +I G + + +A +L KM G +P TY LI LK G+ D
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 606 HAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEA 642
+ L+ +M S G D +T + + G+LD++
Sbjct: 625 KSIELISEMRSNGFSGDAFT-IKMVADLITDGRLDKS 660
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 248/506 (49%), Gaps = 14/506 (2%)
Query: 102 KPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVLDFLRRVNESGSE 161
K GF+ V ++++LL+ L + + + M+++ L+ LF + E
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF---------DQMVE 219
Query: 162 FSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGE 221
L V +NTL+ L V E + +M+ + ++ T+ T++NG CK+G+
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 222 AELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIH 281
A +SK+ + + PD Y+++I C++ +F M +KG N +Y +I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 282 GLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEP 341
G C R +A L R M E + P V T+ +I + G+ EA + +EM R P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 342 NVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQIL 401
+ TY +I CK N+ D+A + + M P+VVT+N +ID YC+ ++ +Q+L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 402 DLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCRE 461
+ N TYN LI GFC+ N++ A L E++ + P IT N L+YG C
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 462 GHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIY 521
L+ A ++ +I S + D Y++ I +CK +V+EA LF SL G++ Y
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 522 TALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTK 581
+I G+C + I DA+ L +M + P++ TYN LI G + ++ +++ L+ +M
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 582 MGVKPTVYTYTILIEEVLKEGDFDHA 607
G +T ++ +++ +G D +
Sbjct: 636 NGFSGDAFTIK-MVADLITDGRLDKS 660
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 213/441 (48%), Gaps = 22/441 (4%)
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
K +D+A+D F M T VI R+ R A+ + +M R N++++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKE--------------- 391
+LI C C +K+ + ++ + G P+VVT+N L+ G C E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 392 -GLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLIT 450
G +E A+ + D M +P T+N LI G C V A +L+N+++ + L ++T
Sbjct: 205 TGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 451 YNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLE 510
Y +++ G C+ G SA +L + E+ + PD YS ID LCK G +AQ LF +
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 511 KKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQ 570
+KGI Y +IDG+C G+ DA LL M+ + P+ T+NALI +E K+
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 571 EALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFI 630
EA L ++M + P TY +I K FD A + D M S PDV T+ I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTII 439
Query: 631 QAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCE 690
YC ++DE L+ +++R G+V ++ TY LI + + + +A D+ + M G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 691 PSHHTYAFLIKHL-SNKKVDE 710
P T L+ N+K++E
Sbjct: 500 PDTITCNILLYGFCENEKLEE 520
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 230/447 (51%), Gaps = 9/447 (2%)
Query: 279 LIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARG 338
L+ C+ + VDEA++ F M E P T ++ L R+ R A F+ +M
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 339 CEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAAL 398
+ NV+T+ ++I+ LCKE K+ +A L M G+ P +VTYN L+ G+ G +E A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 399 QILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQ 458
I+ MKS P+ +TYN ++ C N RA +L E+ E L P ++YN LI G
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 459 CREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGE 518
G L+ A+ + + G+VP +TY+ I L ++E A++L + +KGI
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 519 VIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEK 578
V Y LI+GYC+ G A +L + M++D P +TY +LI L R+ K +EA L EK
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 579 MTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGK 638
+ G+KP + L++ G+ D A LL +M + + PD TY ++ C GK
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 639 LDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAF 698
+EA +L+ +M R GI PD ++Y LI Y+ G AF V M G P+ TY
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 699 LIKHLSNKKVDE------RKQQCDGIL 719
L+K LS + E R+ + +GI+
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIV 604
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 240/476 (50%), Gaps = 3/476 (0%)
Query: 196 DNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVE 255
D + + F+ ++ CC++ V EA + + G P T T ++ R +E
Sbjct: 148 DRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIE 207
Query: 256 KGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVI 315
+ + M + + N ++ +I+ LC+ ++ +A M +PT+ TY ++
Sbjct: 208 NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV 267
Query: 316 FGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLF 375
G GR A +EM ++G +P++ TY ++ +C E + ASE+L M E GL
Sbjct: 268 QGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLV 324
Query: 376 PNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSL 435
P+ V+YN LI G G +E A D M P TYN LI G + A L
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 436 LNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCK 495
+ E+ E+ + +TYN LI G C+ G A+ + + G+ P QFTY+ I LC+
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 496 RGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYT 555
+ + EA LF+ + KG+K V+ L+DG+C G +D A SLL+ M P+ T
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 556 YNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMV 615
YN L+ GL E K +EA L+ +M + G+KP +Y LI K+GD HA + D+M+
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Query: 616 SLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHL 671
SLG P + TY A ++ + + AE+L+ +M EGIVP+ ++ +I A ++L
Sbjct: 565 SLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 227/452 (50%), Gaps = 11/452 (2%)
Query: 152 LRRVNESGSEFSLKLSVKGY-------NTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIY 204
LR V+E+ F L + KG+ N +L LS+ + ++ Y +M + N+Y
Sbjct: 168 LRMVDEAIECFYL-MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVY 226
Query: 205 TFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMM 264
TFN MIN CK G + +A+ ++ + G+ P TY +L+ G+ +E + M
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 265 PKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRK 324
KG + + +Y ++ +C R E L R M E P +Y ++I G G
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 325 SEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNAL 384
A + +EM +G P +TY LI L ENK++ A L+ + EKG+ + VTYN L
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 385 IDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNL 444
I+GYC+ G + A + D M ++ P TY LI C++ A L +++ + +
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 445 SPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQV 504
P L+ N+L+ G C G++D A+ +L ++ + PD TY+ + LC G+ EEA+
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 505 LFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLY 564
L ++++GIK + Y LI GY K+G A + + MLS P TYNAL+ GL
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 565 RERKVQEALLLVEKMTKMGVKPTVYTYTILIE 596
+ ++ + A L+ +M G+ P ++ +IE
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIE 615
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 167/326 (51%), Gaps = 3/326 (0%)
Query: 168 VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVS 227
++ YN +L + E+ R EM + +VP+ ++N +I GC G++ A Y
Sbjct: 295 MQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 351
Query: 228 KIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAK 287
++V+ G+ P +TY +LI G +E + + +KG + V+Y LI+G C+
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 288 RVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYT 347
+A L M D +PT TYT +I+ LCR + EA E F ++ +G +P++
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 348 VLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSN 407
L+D C +D A LL M + P+ VTYN L+ G C EG E A +++ MK
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 408 NCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSA 467
P+ +YN LI G+ K+ + A + +E+L +PTL+TYN+L+ G + + A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591
Query: 468 YKVLHLINESGLVPDQFTYSVFIDTL 493
++L + G+VP+ ++ I+ +
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 184 VDEMKRVY--LEMLDNMVV-PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFT 240
+ M R + L+ +D M + P+ T+N ++ G C G EA + ++ + G+ PD +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 241 YTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMG 300
Y +LI GY + D + F V M G ++Y L+ GL + + + A +L R M
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 301 EDDCRPTVRTYTVVIFGLCRVGRK 324
+ P ++ VI + + K
Sbjct: 600 SEGIVPNDSSFCSVIEAMSNLDAK 623
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 232/472 (49%), Gaps = 9/472 (1%)
Query: 233 GLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEA 292
G P+ FTY L+ C+N V+ ++ + M KGC + VSYT +I +CE V E
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 293 LDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDC 352
+L R P V Y +I GLC+ A E EM +G PNV +Y+ LI+
Sbjct: 236 RELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 353 LCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLM-KSNNCSP 411
LC +++ A L +ML++G PN+ T ++L+ G G AL + + M + P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 412 NARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVL 471
N YN L+ GFC N+ +A+S+ + + E SP + TY SLI G + G LD A +
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 472 HLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKE 531
+ + SG P+ Y+ ++ LC+ + +EA+ L + + K+ + A I G C
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 532 GKIDDAHSLLERMLSDD-CLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYT 590
G++D A + +M C PN TYN L+DGL + +++EA L ++ GV+ + T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 591 YTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI--VK 648
Y L+ G A +L+ +M+ G PD T I AYC GK + A ++ V
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 649 MNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
R PD ++YT +I +L+RM AG PS T++ LI
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 256/514 (49%), Gaps = 19/514 (3%)
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
EF SVK YN +L L + + + VY +M + PN++T+N ++ CK V
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNE--VS-YT 277
A+ + ++ G PD +YT++I C V++G ++ R E VS Y
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG--------RELAERFEPVVSVYN 250
Query: 278 NLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSAR 337
LI+GLC+ A +L R M E P V +Y+ +I LC G+ A F +M R
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 338 GCEPNVHTYTVLID-CLCKENKVDEASELLNRMLEK-GLFPNVVTYNALIDGYCKEGLME 395
GC PN++T + L+ C + D A +L N+M+ GL PNVV YN L+ G+C G +
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369
Query: 396 AALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLI 455
A+ + M+ CSPN RTY LI GF KR ++ A+ + N++L P ++ Y +++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 456 YGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKG-I 514
CR A ++ ++++ P T++ FI LC GR++ A+ +F +E++
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 515 KAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALL 574
V Y L+DG K +I++A+ L + +S TYN L+ G AL
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 575 LVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG---LKPDVYTYTAFIQ 631
LV KM G P T ++I K+G + A ++LD +VS G +PDV +YT I
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIW 608
Query: 632 AYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLI 665
C ++ L+ +M GIVP T+++LI
Sbjct: 609 GLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 232/467 (49%), Gaps = 9/467 (1%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
YN LL L K + VD K++ +EM + P+ ++ T+I+ C+VG V E +
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-- 241
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
P Y +LI G C+ D + F + M +KG N +SY+ LI+ LC + +++
Sbjct: 242 ---FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEM-SARGCEPNVHTYTVL 349
A +M + C P + T + ++ G G +AL+ +N+M G +PNV Y L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 350 IDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNC 409
+ C + +A + + M E G PN+ TY +LI+G+ K G ++ A+ I + M ++ C
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 410 SPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYK 469
PN Y ++ C+ A SL+ + ++N +P++ T+N+ I G C G LD A K
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 470 VLHLINESGLVPDQF-TYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGY 528
V + + P TY+ +D L K R+EEA L + +G++ Y L+ G
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 529 CKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMT--KMGVKP 586
C G A L+ +M+ D P+ T N +I ++ K + A +++ ++ + +P
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRP 598
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAY 633
V +YT +I + + + LL++M+S G+ P + T++ I +
Sbjct: 599 DVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/468 (29%), Positives = 220/468 (47%), Gaps = 10/468 (2%)
Query: 219 VGEAELYVS---KIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVS 275
VG AE V +I + G P Y ++ ++ + V+ M + G N +
Sbjct: 124 VGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFT 183
Query: 276 YTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMS 335
Y L+ LC+ +VD A L M C P +YT VI +C VG E E
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL----- 238
Query: 336 ARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLME 395
A EP V Y LI+ LCKE+ A EL+ M+EKG+ PNV++Y+ LI+ C G +E
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 396 AALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQ-NLSPTLITYNSL 454
A L M C PN T + L+ G R A+ L N+++ L P ++ YN+L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 455 IYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGI 514
+ G C G++ A V + E G P+ TY I+ KRG ++ A +++ + G
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 515 KAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALL 574
V+YT +++ C+ K +A SL+E M ++C P+ T+NA I GL ++ A
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 575 LVEKMTKMG-VKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAY 633
+ +M + P + TY L++ + K + A+ L ++ G++ TY +
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 634 CSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVL 681
C+ G A L+ KM +G PD +T ++I AY G A +L
Sbjct: 539 CNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 225/464 (48%), Gaps = 7/464 (1%)
Query: 239 FTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRR 298
T+ +I + V+ + M +G +E + ++I + + A+++F R
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 299 MGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENK 358
+ E C P+V+ Y V+ L R + +M G EPNV TY VL+ LCK NK
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 359 VDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNE 418
VD A +LL M KG P+ V+Y +I C+ GL++ ++ + + P YN
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNA 251
Query: 419 LICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESG 478
LI G CK + A L+ E++E+ +SP +I+Y++LI C G ++ A+ L + + G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 479 LVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKK-GIKAGEVIYTALIDGYCKEGKIDDA 537
P+ +T S + RG +A L++ + + G++ V Y L+ G+C G I A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 538 HSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEE 597
S+ M C PN TY +LI+G + + A+ + KM G P V YT ++E
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 598 VLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREG-IVP 656
+ + F A L++ M P V T+ AFI+ C G+LD AE + +M ++ P
Sbjct: 432 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Query: 657 DSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLI 700
+ VTY L+ A I A+ + + +F G E S TY L+
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 240/473 (50%), Gaps = 14/473 (2%)
Query: 101 QKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLML-KSCSLDK-------EILFVLDFL 152
++ GF+ +V +Y+ LL L +NN ++K++ M K C D + + +
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 153 RRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMING 212
+ E F +SV YN L+ L K H + EM++ + PN+ +++T+IN
Sbjct: 233 KEGRELAERFEPVVSV--YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 213 CCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILG-YCRNKDVEKGFRVFMMMPKKGCRR 271
C G + A +++++++ G P+ +T +SL+ G + R + M+ G +
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 272 NEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFF 331
N V+Y L+ G C + +A+ +F M E C P +RTY +I G + G A+ +
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 332 NEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKE 391
N+M GC PNV YT +++ LC+ +K EA L+ M ++ P+V T+NA I G C
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 392 GLMEAALQILDLM-KSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLIT 450
G ++ A ++ M + + C PN TYNEL+ G K + A L E+ + + + T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 451 YNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFD--S 508
YN+L++G C G A +++ + G PD+ T ++ I CK+G+ E A + D S
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 509 LEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALID 561
++ + + YT +I G C+ +D LLERM+S +P+ T++ LI+
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 30/248 (12%)
Query: 484 FTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLER 543
T+ V I L G+V+ Q L ++ +G E ++ ++I Y + G + A + R
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 544 MLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGD 603
+ C P+ YN ++D L E ++Q ++ M + G +P V+TY +L++ + K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 604 FDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDE---------------------- 641
D A +LL +M + G PD +YT I + C +G + E
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 642 --------AEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSH 693
A +L+ +M +GI P+ ++Y+ LI + G I AF L +M GC P+
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 694 HTYAFLIK 701
+T + L+K
Sbjct: 317 YTLSSLVK 324
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Query: 201 PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAG-LSPDTFTYTSLILGYCRNKDVEKGFR 259
P++ TFN I G C G + AE ++ Q P+ TY L+ G + +E+ +
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 260 VFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLC 319
+ + +G + +Y L+HG C A AL L +M D P T ++I C
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 320 RVGRKSEALEFFNEMSA--RGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPN 377
+ G+ A + + +S R P+V +YT +I LC+ N ++ LL RM+ G+ P+
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Query: 378 VVTYNALIDGYCKEGLMEAALQ 399
+ T++ LI+ + + ++ A Q
Sbjct: 635 IATWSVLINCFILDDIVRAHDQ 656
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEM-LDNMVVPNIYTFNTMINGCCKVGNVGEAELY 225
SV +N + L +D ++V+ +M + PNI T+N +++G K + EA
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 226 VSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCE 285
+I G+ + TY +L+ G C ++ M G +E++ +I C+
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 286 ---AKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPN 342
A+R + LDL G RP V +YT VI+GLCR + + + M + G P+
Sbjct: 576 QGKAERAAQMLDLVS-CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Query: 343 VHTYTVLIDCL 353
+ T++VLI+C
Sbjct: 635 IATWSVLINCF 645
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 253 bits (645), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 225/421 (53%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
S+ ++ LL +SK D + ++ +M + N+ T N ++N C+ + A ++
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
K+++ G P T+ SL+ G+CR V +F M G + N V Y +I GLC++
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
K+VD ALDL RM +D P V TY +I GLC GR S+A + M+ R P+V T+
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
LID KE +V EA E M+ + L P++VTY+ LI G C ++ A ++ M S
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
C P+ TY+ LI G+CK K V M L E+ ++ + +TY LI G CR G L+
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
A ++ + G+ P+ TY+V + LC G++E+A V+ ++K G+ A V Y +I
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
G CK G++ DA + + +P+ +TY ++ GLY++ +EA L KM + G+ P
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Query: 587 T 587
Sbjct: 500 N 500
Score = 246 bits (627), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 219/429 (51%)
Query: 229 IVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKR 288
+VQ P ++ L+ + K + ++ M G N + L++ C +
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 289 VDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTV 348
+ AL +M + P++ T+ ++ G CR R +AL F++M G +PNV Y
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 349 LIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNN 408
+ID LCK +VD A +LLNRM + G+ P+VVTYN+LI G C G A +++ M
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 409 CSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAY 468
P+ T+N LI K V A E++ ++L P ++TY+ LIYG C LD A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 469 KVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGY 528
++ + G PD TYS+ I+ CK +VE LF + ++G+ V YT LI GY
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 529 CKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTV 588
C+ GK++ A + RM+ PN TYN L+ GL K+++AL+++ M K G+ +
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 589 YTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVK 648
TY I+I + K G+ A + + GL PD++TYT + G EA+ L K
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 649 MNREGIVPD 657
M +GI+P+
Sbjct: 492 MKEDGILPN 500
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 235/454 (51%), Gaps = 6/454 (1%)
Query: 272 NEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFF 331
N Y ++ ++D++LDLF M + P++ ++ ++ + ++ + + +
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 332 NEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKE 391
+M G N+ T +L++C C+ +++ A L +M++ G P++VT+ +L++G+C+
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 392 GLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITY 451
+ AL + D M PN YN +I G CK K V A+ LLN + + + P ++TY
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 452 NSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEK 511
NSLI G C G A +++ + + + PD FT++ ID K GRV EA+ ++ + +
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 512 KGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQE 571
+ + V Y+ LI G C ++D+A + M+S C P+ TY+ LI+G + +KV+
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 572 ALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQ 631
+ L +M++ GV TYTILI+ + G + A + +MV G+ P++ TY +
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 632 AYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEP 691
C GK+++A ++ M + G+ D VTY ++I G + A+D+ + G P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 692 SHHTYAFLIKHLSNKKVDE------RKQQCDGIL 719
TY ++ L K + RK + DGIL
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 177/336 (52%), Gaps = 6/336 (1%)
Query: 189 RVY--LEMLDNMV----VPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYT 242
RVY L M D MV PN+ +NT+I+G CK V A ++++ + G+ PD TY
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 243 SLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGED 302
SLI G C + R+ M K+ + ++ LI + RV EA + + M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 303 DCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEA 362
P + TY+++I+GLC R EA E F M ++GC P+V TY++LI+ CK KV+
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 363 SELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICG 422
+L M ++G+ N VTY LI GYC+ G + A +I M PN TYN L+ G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 423 FCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPD 482
C + +A+ +L ++ + + ++TYN +I G C+ G + A+ + +N GL+PD
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 483 QFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGE 518
+TY+ + L K+G EA LF +++ GI E
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 166/313 (53%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
YNT++ L K VD + M + + P++ T+N++I+G C G +A VS +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
+ + PD FT+ +LI + V + + M ++ + V+Y+ LI+GLC R+D
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLI 350
EA ++F M C P V TY+++I G C+ + ++ F EMS RG N TYT+LI
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 351 DCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCS 410
C+ K++ A E+ RM+ G+ PN++TYN L+ G C G +E AL IL M+ N
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 411 PNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKV 470
+ TYN +I G CK V A + L Q L P + TY +++ G ++G A +
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 471 LHLINESGLVPDQ 483
+ E G++P++
Sbjct: 489 FRKMKEDGILPNE 501
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 147/315 (46%), Gaps = 27/315 (8%)
Query: 420 ICGFCKRKNVHRAMSLLNELLEQNLS--------------------PTLITYNSLIYGQC 459
ICGFC + + S E+L + P++ ++ L+
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 460 REGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEV 519
+ D + + G+ + T ++ ++ C+ ++ A + K G + V
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 520 IYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKM 579
+ +L++G+C+ ++ DA + ++M+ PN YN +IDGL + ++V AL L+ +M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 580 TKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKL 639
K G+ P V TY LI + G + A R++ M + PDV+T+ A I A G++
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 640 DEAEDLIVKMNREGIVPDSVTYTLLI---CAYAHLGLIYSAFDVLKRMFDAGCEPSHHTY 696
EAE+ +M R + PD VTY+LLI C Y+ L A ++ M GC P TY
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD---EAEEMFGFMVSKGCFPDVVTY 329
Query: 697 AFLIK-HLSNKKVDE 710
+ LI + +KKV+
Sbjct: 330 SILINGYCKSKKVEH 344
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 181/703 (25%), Positives = 324/703 (46%), Gaps = 49/703 (6%)
Query: 48 SQIFTILSTHPTTWQRHTSITKLIPLLSPSHISSLFSLDLNPQTALDFSYWISQKPGFKH 107
+ I +L T P +++ L P + + + A+++ W ++ H
Sbjct: 37 NDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPH 96
Query: 108 SVESYSSLLNLLIRNNFTKASEKIVFLMLKSC---SLDKEILFVLDFLRR--------VN 156
ESY+SLL ++ R A ++I+ M + S++ I VL ++ V
Sbjct: 97 CPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVV 156
Query: 157 ESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKV 216
+ +F + + Y TL+ S + D M ++ +M + P ++ F T+I G K
Sbjct: 157 QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 217 GNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSY 276
G V A + ++ + L D Y I + + V+ ++ F + G + +EV+Y
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 277 TNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSA 336
T++I LC+A R+DEA+++F + ++ P Y +I G G+ EA A
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 337 RGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEA 396
+G P+V Y ++ CL K KVDEA ++ M +K PN+ TYN LID C+ G ++
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 397 ALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIY 456
A ++ D M+ PN RT N ++ CK + + A ++ E+ + +P IT+ SLI
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 457 GQCREGHLDSAYKVLH------------------------------------LINESGLV 480
G + G +D AYKV +IN++
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN-CS 514
Query: 481 PDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSL 540
PD + ++D + K G E+ + +F+ ++ + Y+ LI G K G ++ + L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 541 LERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLK 600
M C+ ++ YN +IDG + KV +A L+E+M G +PTV TY +I+ + K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 601 EGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVT 660
D A+ L ++ S ++ +V Y++ I + +G++DEA ++ ++ ++G+ P+ T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 661 YTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL 703
+ L+ A I A + M + C P+ TY LI L
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 249/499 (49%), Gaps = 1/499 (0%)
Query: 167 SVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYV 226
SV YN +L L K VDE +V+ EM + PN+ T+N +I+ C+ G + A
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 227 SKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEA 286
+ +AGL P+ T ++ C+++ +++ +F M K C +E+++ +LI GL +
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 287 KRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTY 346
RVD+A ++ +M + DCR YT +I GRK + + + +M + C P++
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 347 TVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKS 406
+DC+ K + ++ + + + P+ +Y+ LI G K G ++ MK
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 407 NNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDS 466
C + R YN +I GFCK V++A LL E+ + PT++TY S+I G + LD
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 467 AYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
AY + + + YS ID K GR++EA ++ + L +KG+ + +L+D
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
K +I++A + M C PN TY LI+GL + RK +A + ++M K G+KP
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
+ +YT +I + K G+ A L D+ + G PD Y A I+ + + +A L
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 647 VKMNREGIVPDSVTYTLLI 665
+ R G+ + T +L+
Sbjct: 821 EETRRRGLPIHNKTCVVLL 839
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/617 (27%), Positives = 295/617 (47%), Gaps = 14/617 (2%)
Query: 101 QKPGFKHSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILF---VLDFLRRVN- 156
Q+ G++ +V +++L+ + ++ ++ M KS SLD +I+ +D +V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM-KSSSLDADIVLYNVCIDSFGKVGK 253
Query: 157 -ESGSEFSLKLSVKG-------YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNT 208
+ +F ++ G Y +++ L K + +DE ++ + N VP Y +NT
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 209 MINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKG 268
MI G G EA + + G P Y ++ + V++ +VF M KK
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKD 372
Query: 269 CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEAL 328
N +Y LI LC A ++D A +L M + P VRT +++ LC+ + EA
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 329 EFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGY 388
F EM + C P+ T+ LID L K +VD+A ++ +ML+ N + Y +LI +
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 389 CKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTL 448
G E +I M + NCSP+ + N + K + ++ E+ + P
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 449 ITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDS 508
+Y+ LI+G + G + Y++ + + E G V D Y++ ID CK G+V +A L +
Sbjct: 553 RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 509 LEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERK 568
++ KG + V Y ++IDG K ++D+A+ L E S N Y++LIDG + +
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Query: 569 VQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTA 628
+ EA L++E++ + G+ P +YT+ L++ ++K + + A M L P+ TY
Sbjct: 673 IDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 629 FIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAG 688
I C + K ++A +M ++G+ P +++YT +I A G I A + R G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 689 CEPSHHTYAFLIKHLSN 705
P Y +I+ LSN
Sbjct: 793 GVPDSACYNAMIEGLSN 809
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 253/521 (48%), Gaps = 17/521 (3%)
Query: 108 SVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSLDKEILFVL-DFLRRVNESGSEFSLKL 166
SV +Y+ +L L + + K+ M K + + +L D L R + + F L+
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 167 S---------VKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVG 217
S V+ N ++ +L K +DE ++ EM + P+ TF ++I+G KVG
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 218 NVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYT 277
V +A K++ + ++ YTSLI + + E G +++ M + C +
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 278 NLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSAR 337
+ + +A ++ +F + P R+Y+++I GL + G +E E F M +
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 338 GCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAA 397
GC + Y ++ID CK KV++A +LL M KG P VVTY ++IDG K ++ A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 398 LQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYG 457
+ + KS N Y+ LI GF K + A +L EL+++ L+P L T+NSL+
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 458 QCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAG 517
+ ++ A + E P+Q TY + I+ LCK + +A V + ++K+G+K
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 518 EVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVE 577
+ YT +I G K G I +A +L +R ++ +P+S YNA+I+GL + +A L E
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Query: 578 KMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLG 618
+ + G+ T +L++ + H + L+Q +G
Sbjct: 822 ETRRRGLPIHNKTCVVLLDTL-------HKNDCLEQAAIVG 855
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 155/343 (45%), Gaps = 2/343 (0%)
Query: 172 NTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEA-ELYVSKIV 230
NT + + K ++ + ++ E+ VP+ +++ +I+G K G E EL+ S +
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS-MK 579
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
+ G DT Y +I G+C+ V K +++ M KG V+Y ++I GL + R+D
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLI 350
EA LF V Y+ +I G +VGR EA E+ +G PN++T+ L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 351 DCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCS 410
D L K +++EA M E PN VTY LI+G CK A M+
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 411 PNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKV 470
P+ +Y +I G K N+ A +L + P YN++I G A+ +
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 471 LHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKG 513
GL T V +DTL K +E+A ++ L + G
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/480 (30%), Positives = 236/480 (49%)
Query: 193 EMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNK 252
EML + P++ TFN +IN C G+ ++ + K+ ++G +P TY +++ YC+
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 253 DVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYT 312
+ + M KG + +Y LIH LC + R+ + L R M + P TY
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 313 VVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEK 372
+I G G+ A + NEM + G PN T+ LID E EA ++ M K
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362
Query: 373 GLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRA 432
GL P+ V+Y L+DG CK + A MK N TY +I G CK + A
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 433 MSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDT 492
+ LLNE+ + + P ++TY++LI G C+ G +A +++ I GL P+ YS I
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 482
Query: 493 LCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPN 552
C+ G ++EA +++++ +G + L+ CK GK+ +A + M SD LPN
Sbjct: 483 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542
Query: 553 SYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLD 612
+ +++ LI+G + +A + ++MTK+G PT +TY L++ + K G A + L
Sbjct: 543 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602
Query: 613 QMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLG 672
+ ++ D Y + A C G L +A L +M + I+PDS TYT LI G
Sbjct: 603 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 178/631 (28%), Positives = 288/631 (45%), Gaps = 28/631 (4%)
Query: 87 LNPQTALDFSYWISQKPGFK--HSVESYSSLLNLLIRNNFTKASEKIVFLMLKSCSL-DK 143
++ + AL F W+ ++PG + H V+ ++L+R + I LK SL
Sbjct: 48 VHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHI----LKELSLMSG 103
Query: 144 EILFVLDFL----RRVNESGSEFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMV 199
+ FV L R N + S + + L + +L + M + LE+ M
Sbjct: 104 KSSFVFGALMTTYRLCNSNPSVYDI-------------LIRVYLREGMIQDSLEIFRLMG 150
Query: 200 V----PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVE 255
+ P++YT N ++ K G ++ ++++ + PD T+ LI C E
Sbjct: 151 LYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFE 210
Query: 256 KGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVI 315
K + M K G V+Y ++H C+ R A++L M V TY ++I
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270
Query: 316 FGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLF 375
LCR R ++ +M R PN TY LI+ E KV AS+LLN ML GL
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 376 PNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSL 435
PN VT+NALIDG+ EG + AL++ +M++ +P+ +Y L+ G CK A
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 436 LNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCK 495
+ + ITY +I G C+ G LD A +L+ +++ G+ PD TYS I+ CK
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 450
Query: 496 RGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYT 555
GR + A+ + + + G+ +IY+ LI C+ G + +A + E M+ + + +T
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 510
Query: 556 YNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMV 615
+N L+ L + KV EA + MT G+ P ++ LI G+ A + D+M
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 616 SLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIY 675
+G P +TY + ++ C G L EAE + ++ D+V Y L+ A G +
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 676 SAFDVLKRMFDAGCEPSHHTYAFLIKHLSNK 706
A + M P +TY LI L K
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/544 (30%), Positives = 244/544 (44%), Gaps = 36/544 (6%)
Query: 200 VPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFR 259
P I T+NT+++ CK G A + + G+ D TY LI CR+ + KG+
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 260 VFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLC 319
+ M K+ NEV+Y LI+G +V A L M P T+ +I G
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 320 RVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVV 379
G EAL+ F M A+G P+ +Y VL+D LCK + D A RM G+ +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 380 TYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNEL 439
TY +IDG CK G ++ A+ +L+ M + P+ TY+ LI GFCK A ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 440 LEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRV 499
LSP I Y++LIY CR G L A ++ + G D FT++V + +LCK G+V
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 500 EEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNAL 559
EA+ + GI V + LI+GY G+ A S+ + M P +TY +L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 560 IDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGL 619
+ GL + ++EA ++ + + Y L+ + K G+ A L +MV +
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 620 KPDVYTYTAFIQAYCSIGK-------LDEAE----------------DLIVK-------- 648
PD YTYT+ I C GK EAE D + K
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 649 -----MNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHL 703
M+ G PD VT +I Y+ +G I D+L M + P+ TY L+
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 704 SNKK 707
S +K
Sbjct: 765 SKRK 768
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/582 (27%), Positives = 255/582 (43%), Gaps = 71/582 (12%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
Y+TL+ + + E R+Y M+ + +TFN ++ CK G V EAE ++ +
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
G+ P+T ++ LI GY + + K F VF M K G +Y +L+ GLC+ +
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 291 EA-----------------------------------LDLFRRMGEDDCRPTVRTYTVVI 315
EA + LF M + P TYT +I
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 316 FGLCRVGRKSEALEFFNEMSARG-CEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGL 374
GLCR G+ A+ F E ARG PN YT +D + K + +M G
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715
Query: 375 FPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMS 434
P++VT NA+IDGY + G +E +L M + N PN TYN L+ G+ KRK+V +
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 775
Query: 435 LLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLC 494
L ++ + P +T +SL+ G C L+ K+L G+ D++T+++ I C
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835
Query: 495 KRG-----------------------------------RVEEAQVLFDSLEKKGIKAGEV 519
G R +E++++ + K+GI
Sbjct: 836 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
Query: 520 IYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKM 579
Y LI+G C+ G I A + E M++ P + +A++ L + K EA LL+ M
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 580 TKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKL 639
KM + PT+ ++T L+ K G+ A L M + GLK D+ +Y I C+ G +
Sbjct: 956 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1015
Query: 640 DEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVL 681
A +L +M +G + ++ TY LI +S D++
Sbjct: 1016 ALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1057
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 218/484 (45%), Gaps = 11/484 (2%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
Y +LL L K + E ++ + + +NT++ CK GN+ +A ++V
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRR------NEVSYTNLIHGLC 284
Q + PD++TYTSLI G CR KG V ++ K N+V YT + G+
Sbjct: 641 QRSILPDSYTYTSLISGLCR-----KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695
Query: 285 EAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVH 344
+A + + +M P + T +I G R+G+ + + EM + PN+
Sbjct: 696 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 755
Query: 345 TYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLM 404
TY +L+ K V + L ++ G+ P+ +T ++L+ G C+ ++E L+IL
Sbjct: 756 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 815
Query: 405 KSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHL 464
+ T+N LI C ++ A L+ + +S T ++++ R
Sbjct: 816 ICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRF 875
Query: 465 DSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTAL 524
+ VLH +++ G+ P+ Y I+ LC+ G ++ A V+ + + I V +A+
Sbjct: 876 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 935
Query: 525 IDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGV 584
+ K GK D+A LL ML +P ++ L+ + V EAL L M+ G+
Sbjct: 936 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 995
Query: 585 KPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAED 644
K + +Y +LI + +GD A L ++M G + TY A I+ + D
Sbjct: 996 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGAD 1055
Query: 645 LIVK 648
+I+K
Sbjct: 1056 IILK 1059
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 238/444 (53%), Gaps = 9/444 (2%)
Query: 161 EFSLKLSVKGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVG 220
EFS LS + +++KF LV +E+L + N+YT+N +IN C+ +
Sbjct: 80 EFSKLLSA------IAKMNKFDLVISFGE-KMEILG--ISHNLYTYNILINCFCRCSRLS 130
Query: 221 EAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLI 280
A + K+++ G PD T SL+ G+C + + M + G + + V++T LI
Sbjct: 131 LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 281 HGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE 340
HGL + EA+ L RM + C+P + TY V+ GLC+ G AL N+M A E
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 341 PNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQI 400
NV Y+ +ID LCK D+A L M KG+ PNV+TY++LI C G A ++
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 401 LDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCR 460
L M +PN T++ LI F K+ + +A L E++++++ P + TY+SLI G C
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 461 EGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVI 520
L A ++L L+ +P+ TY+ I+ CK RV++ LF + ++G+ V
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 521 YTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMT 580
YT LI G+ + D+A + ++M+S PN TYN L+DGL + K+ +A+++ E +
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Query: 581 KMGVKPTVYTYTILIEEVLKEGDF 604
+ ++P +YTY I+IE + K G +
Sbjct: 491 RSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 233 bits (593), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 224/420 (53%), Gaps = 5/420 (1%)
Query: 268 GCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEA 327
G N +Y LI+ C R+ AL L +M + P + T ++ G C R S+A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 328 LEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDG 387
+ ++M G +P+ T+T LI L NK EA L++RM+++G P++VTY A+++G
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 388 YCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPT 447
CK G + AL +L+ M++ N Y+ +I CK ++ A++L E+ + + P
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 448 LITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFD 507
+ITY+SLI C G A ++L + E + P+ T+S ID K+G++ +A+ L++
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 508 SLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRER 567
+ K+ I Y++LI+G+C ++ +A +LE M+ DCLPN TYN LI+G + +
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407
Query: 568 KVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYT 627
+V + + L +M++ G+ TYT LI + D D+A + QMVS+G+ P++ TY
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467
Query: 628 AFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLI-----CAYAHLGLIYSAFDVLK 682
+ C GKL +A + + R + PD TY ++I +G IY LK
Sbjct: 468 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVASALK 527
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 227/441 (51%), Gaps = 6/441 (1%)
Query: 269 CRRNEVS------YTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVG 322
CRR S Y ++ +D+A+ LF M + P++ ++ ++ + ++
Sbjct: 33 CRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN 92
Query: 323 RKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYN 382
+ + F +M G N++TY +LI+C C+ +++ A LL +M++ G P++VT N
Sbjct: 93 KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152
Query: 383 ALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQ 442
+L++G+C + A+ ++D M P+ T+ LI G A++L++ ++++
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212
Query: 443 NLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEA 502
P L+TY +++ G C+ G D A +L+ + + + + YS ID+LCK ++A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 503 QVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDG 562
LF +E KG++ + Y++LI C G+ DA LL M+ PN T++ALID
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 563 LYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPD 622
++ K+ +A L E+M K + P ++TY+ LI A ++L+ M+ P+
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 623 VYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLK 682
V TY I +C ++D+ +L +M++ G+V ++VTYT LI + +A V K
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 683 RMFDAGCEPSHHTYAFLIKHL 703
+M G P+ TY L+ L
Sbjct: 453 QMVSVGVHPNILTYNILLDGL 473
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 168/319 (52%), Gaps = 4/319 (1%)
Query: 192 LEMLDNMVV----PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILG 247
+ ++D MV P++ T+ ++NG CK G+ A ++K+ A + + Y+++I
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 248 YCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPT 307
C+ + + +F M KG R N ++Y++LI LC R +A L M E P
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 308 VRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLN 367
+ T++ +I + G+ +A + + EM R +PN+ TY+ LI+ C +++ EA ++L
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 368 RMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRK 427
M+ K PNVVTYN LI+G+CK ++ +++ M N TY LI GF + +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 428 NVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYS 487
+ A + +++ + P ++TYN L+ G C+ G L A V + S + PD +TY+
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502
Query: 488 VFIDTLCKRGRVEEAQVLF 506
+ I+ +CK G+ + + F
Sbjct: 503 IMIEGMCKAGKWKMGGIYF 521
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 178/354 (50%), Gaps = 1/354 (0%)
Query: 358 KVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYN 417
++D+A L M + FP+++ ++ L+ K + + + M+ S N TYN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 418 ELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINES 477
LI FC+ + A++LL ++++ P ++T NSL+ G C + A ++ + E
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 478 GLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDA 537
G PD T++ I L + EA L D + ++G + V Y A+++G CK G D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 538 HSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEE 597
+LL +M + N Y+ +ID L + R +AL L +M GV+P V TY+ LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 598 VLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPD 657
+ G + A RLL M+ + P++ T++A I A+ GKL +AE L +M + I P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 658 SVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHHTYAFLIKHLSN-KKVDE 710
TY+ LI + L + A +L+ M C P+ TY LI K+VD+
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 177/625 (28%), Positives = 293/625 (46%), Gaps = 45/625 (7%)
Query: 79 ISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTK----ASEKIVFL 134
I L + + P+ A F WI ++ K S ++++++L +L N+ +E+ + L
Sbjct: 89 IRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDL 148
Query: 135 -------MLKSCSLDKEIL-------------------FVLDFLRRVNESGSEFSLKLSV 168
+L S DK I F+L F + + + SV
Sbjct: 149 GMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKG-----FLPSV 203
Query: 169 KGYNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSK 228
+ N +L L ++++ VY M+++ ++P + TFNTM++ C K G++ + +
Sbjct: 204 RNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLE 263
Query: 229 IVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKR 288
+ + + TY LI G+ +N +E+ R M + G S+ LI G C+
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 289 VDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTV 348
D+A + M PT TY + I LC GR +A E + M+A P+V +Y
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNT 379
Query: 349 LIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNN 408
L+ K K EAS L + + + P++VTYN LIDG C+ G +E A ++ + M +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 409 CSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAY 468
P+ TY L+ GF K N+ A + +E+L + + P Y + G+ R G D A+
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 469 KVLH--LINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALID 526
+ LH ++ PD Y+V ID LCK G + +A + + G+ V YT +I
Sbjct: 500 R-LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 558
Query: 527 GYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKP 586
GY + G+ A +L + ML P+ TY LI G + ++++A +M K GV+P
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 587 TVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLI 646
V T+ L+ + K G+ D A+R L +M G+ P+ Y+YT I C K +E L
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLY 678
Query: 647 VKMNREGIVPDSVTYTLLICAYAHL 671
+M + I PD T+ L + HL
Sbjct: 679 KEMLDKEIEPDGYTHRAL---FKHL 700
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 212/480 (44%), Gaps = 50/480 (10%)
Query: 135 MLKSCSLDKEILFVLDFLRRVNESGSEF---SLKLSVKGYNTLLMQLSKFHLVDEMKRVY 191
ML SC F L RV++ E +++ S YN L+ SK ++E +R +
Sbjct: 244 MLDSC-------FKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 192 LEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRN 251
+M + Y+FN +I G CK G +A +++ AG+ P T TY I C
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 252 KDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTY 311
++ + M VSY L+HG + + EA LF + D P++ TY
Sbjct: 357 GRIDDARELLSSMAAPDV----VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 312 TVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLE 371
+I GLC G A EM+ + P+V TYT L+ K + A+E+ + ML
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 372 KGL------------------------------------FPNVVTYNALIDGYCKEGLME 395
KG+ P++ YN IDG CK G +
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 396 AALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLI 455
A++ + P+ TY +I G+ + A +L +E+L + L P++ITY LI
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 456 YGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIK 515
YG + G L+ A++ + + G+ P+ T++ + +CK G ++EA +E++GI
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 516 AGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLL 575
+ YT LI C K ++ L + ML + P+ YT+ AL L ++ + +E L
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 183/376 (48%), Gaps = 6/376 (1%)
Query: 171 YNTLLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIV 230
YN + L F +D+ + E+L +M P++ ++NT+++G K+G EA L +
Sbjct: 346 YNIYICALCDFGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 231 QAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVD 290
+ P TY +LI G C + ++E R+ M + + ++YT L+ G + +
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 291 EALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCE-PNVHTYTVL 349
A +++ M +P YT G R+G +A EM A P++ Y V
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 350 IDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNC 409
ID LCK + +A E ++ GL P+ VTY +I GY + G + A + D M
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 410 SPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYK 469
P+ TY LI G K + +A E+ ++ + P ++T+N+L+YG C+ G++D AY+
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 470 VLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYC 529
L + E G+ P++++Y++ I C + EE L+ + K I+ + AL
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 701
Query: 530 KEGKIDDAHSLLERML 545
K+ + + LER+L
Sbjct: 702 KDHESREV-EFLERLL 716
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 247/491 (50%), Gaps = 17/491 (3%)
Query: 201 PNIYTFNTMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRV 260
P+ +FN++++ CK+G V AE V + + G PD +Y SLI G+CRN D+ V
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 261 FMMMPKKG---CRRNEVSYTNLIHGLCEAKRVDEALDLFRRMGE--DDCRPTVRTYTVVI 315
+ C+ + VS+ +L +G + K +DE +F MG C P V TY+ I
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE---VFVYMGVMLKCCSPNVVTYSTWI 170
Query: 316 FGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLF 375
C+ G AL+ F+ M PNV T+T LID CK ++ A L M +
Sbjct: 171 DTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS 230
Query: 376 PNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSL 435
NVVTY ALIDG+CK+G M+ A ++ M + PN+ Y +I GF +R + AM
Sbjct: 231 LNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 436 LNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCK 495
L ++L Q + + Y +I G C G L A +++ + +S LVPD ++ ++ K
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 496 RGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDA--HSLLERMLSDDCLPNS 553
GR++ A ++ L ++G + V + +IDG K G++ +A + +E+ N
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK-------AND 403
Query: 554 YTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQ 613
Y LID L +E E L K+++ G+ P + YT I + K+G+ A +L +
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463
Query: 614 MVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGL 673
MV GL D+ YT I S G + EA + +M GI PDS + LLI AY G
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGN 523
Query: 674 IYSAFDVLKRM 684
+ +A D+L M
Sbjct: 524 MAAASDLLLDM 534
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 255/511 (49%), Gaps = 21/511 (4%)
Query: 200 VPNIYTFN----TMINGCCKVGNVGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVE 255
+P+ +T N +IN C + ++ +++ +V G +P ++ S++ C+ V+
Sbjct: 18 LPDPFTCNKHIHQLINSNCGILSLK----FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVK 73
Query: 256 KGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEA---LDLFRRMGEDDCRPTVRTYT 312
+ MP+ GC + +SY +LI G C + A L+ R C+P + ++
Sbjct: 74 FAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFN 133
Query: 313 VVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCLCKENKVDEASELLNRMLEK 372
+ G ++ E + M + C PNV TY+ ID CK ++ A + + M
Sbjct: 134 SLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD 192
Query: 373 GLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRA 432
L PNVVT+ LIDGYCK G +E A+ + M+ S N TY LI GFCK+ + RA
Sbjct: 193 ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRA 252
Query: 433 MSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDT 492
+ + ++E + P + Y ++I G + G D+A K L + G+ D Y V I
Sbjct: 253 EEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG 312
Query: 493 LCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPN 552
LC G+++EA + + +EK + VI+T +++ Y K G++ A ++ +++ P+
Sbjct: 313 LCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372
Query: 553 SYTYNALIDGLYRERKVQEALLL--VEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRL 610
+ +IDG+ + ++ EA++ +EK + YT+LI+ + KEGDF RL
Sbjct: 373 VVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-------MYTVLIDALCKEGDFIEVERL 425
Query: 611 LDQMVSLGLKPDVYTYTAFIQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAH 670
++ GL PD + YT++I C G L +A L +M +EG++ D + YT LI A
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLAS 485
Query: 671 LGLIYSAFDVLKRMFDAGCEPSHHTYAFLIK 701
GL+ A V M ++G P + LI+
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 253/535 (47%), Gaps = 30/535 (5%)
Query: 72 PLLSPSHISSLFSLDLNPQTALDFSYWISQKPGFKHSVESYSSLLNLLIRNNFTKASEKI 131
P HI L + + + +Y +S+ G+ S++S+++ + + K +E I
Sbjct: 21 PFTCNKHIHQLINSNCGILSLKFLAYLVSR--GYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 132 VFLMLK-SCSLD-----------------KEILFVLDFLRRVNESGSEFSLKLSVKGYNT 173
V M + C D + VL+ LR + F K + +N+
Sbjct: 79 VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR----ASHGFICKPDIVSFNS 134
Query: 174 LLMQLSKFHLVDEMKRVYLEMLDNMVVPNIYTFNTMINGCCKVGNVGEAELYVSKIVQAG 233
L SK ++DE+ VY+ ++ PN+ T++T I+ CK G + A + +
Sbjct: 135 LFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA 193
Query: 234 LSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTNLIHGLCEAKRVDEAL 293
LSP+ T+T LI GYC+ D+E ++ M + N V+YT LI G C+ + A
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Query: 294 DLFRRMGEDDCRPTVRTYTVVIFGLCRVGRKSEALEFFNEMSARGCEPNVHTYTVLIDCL 353
+++ RM ED P YT +I G + G A++F +M +G ++ Y V+I L
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Query: 354 CKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLMEAALQILDLMKSNNCSPNA 413
C K+ EA+E++ M + L P++V + +++ Y K G M+AA+ + + P+
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDV 373
Query: 414 RTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLIYGQCREGHLDSAYKVLHL 473
+ +I G K +H A+ +E+ + Y LI C+EG ++
Sbjct: 374 VALSTMIDGIAKNGQLHEAIVYF--CIEK---ANDVMYTVLIDALCKEGDFIEVERLFSK 428
Query: 474 INESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIKAGEVIYTALIDGYCKEGK 533
I+E+GLVPD+F Y+ +I LCK+G + +A L + ++G+ + YT LI G +G
Sbjct: 429 ISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGL 488
Query: 534 IDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLLVEKMTKMGVKPTV 588
+ +A + + ML+ P+S ++ LI +E + A L+ M + G+ V
Sbjct: 489 MVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 236/500 (47%), Gaps = 11/500 (2%)
Query: 219 VGEAELYVSKIVQAGLSPDTFTYTSLILGYCRNKDVEKGFRVFMMMPKKGCRRNEVSYTN 278
V EA ++S++ ++ PD FT I + + + +G + S+ +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 279 LIHGLCEAKRVDEALDLFRRMGEDDCRPTVRTYTVVIFGLCRVGR-KSEALEFFNEMSAR 337
++ +C+ +V A D+ M C P V +Y +I G CR G +S +L + ++
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 338 G--CEPNVHTYTVLIDCLCKENKVDEASELLNRMLEKGLFPNVVTYNALIDGYCKEGLME 395
G C+P++ ++ L + K +DE + ML K PNVVTY+ ID +CK G ++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 396 AALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYNSLI 455
AL+ MK + SPN T+ LI G+CK ++ A+SL E+ +S ++TY +LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 456 YGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKKGIK 515
G C++G + A ++ + E + P+ Y+ ID +RG + A + +G++
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 516 AGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKVQEALLL 575
Y +I G C GK+ +A ++E M D +P+ + +++ ++ +++ A+ +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 576 VEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGL-KPDVYTYTAFIQAYC 634
K+ + G +P V + +I+ + K G A +V + K + YT I A C
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEA------IVYFCIEKANDVMYTVLIDALC 414
Query: 635 SIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGCEPSHH 694
G E E L K++ G+VPD YT I G + AF + RM G
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 474
Query: 695 TYAFLIKHLSNKKVDERKQQ 714
Y LI L++K + +Q
Sbjct: 475 AYTTLIYGLASKGLMVEARQ 494
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 153/325 (47%), Gaps = 5/325 (1%)
Query: 393 LMEAALQILDLMKSNNCSPNARTYNELICGFCKRKNVHRAMSLLNELLEQNLSPTLITYN 452
++ ALQ L ++ ++ P+ T N+ I ++ L L+ + +P ++N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 453 SLIYGQCREGHLDSAYKVLHLINESGLVPDQFTYSVFIDTLCKRGRVEEAQVLFDSLEKK 512
S++ C+ G + A ++H + G PD +Y+ ID C+ G + A ++ +SL
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 513 G---IKAGEVIYTALIDGYCKEGKIDDAHSLLERMLSDDCLPNSYTYNALIDGLYRERKV 569
K V + +L +G+ K +D+ + ML C PN TY+ ID + ++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGEL 179
Query: 570 QEALLLVEKMTKMGVKPTVYTYTILIEEVLKEGDFDHAHRLLDQMVSLGLKPDVYTYTAF 629
Q AL M + + P V T+T LI+ K GD + A L +M + + +V TYTA
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 630 IQAYCSIGKLDEAEDLIVKMNREGIVPDSVTYTLLICAYAHLGLIYSAFDVLKRMFDAGC 689
I +C G++ AE++ +M + + P+S+ YT +I + G +A L +M + G
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 690 EPSHHTYAFLIKHL-SNKKVDERKQ 713
Y +I L N K+ E +
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATE 324
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 269,555,385
Number of Sequences: 539616
Number of extensions: 11568844
Number of successful extensions: 44675
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 28872
Number of HSP's gapped (non-prelim): 3547
length of query: 730
length of database: 191,569,459
effective HSP length: 125
effective length of query: 605
effective length of database: 124,117,459
effective search space: 75091062695
effective search space used: 75091062695
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)