BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004792
         (730 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score = 1504 bits (3893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 724/726 (99%), Positives = 725/726 (99%)

Query: 1   MAAAASSSEVSMKSCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTV 60
           MAAAASSSEVSMKSCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTV
Sbjct: 1   MAAAASSSEVSMKSCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTV 60

Query: 61  PREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQ 120
           PREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQ
Sbjct: 61  PREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQ 120

Query: 121 VTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 180
           VTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL
Sbjct: 121 VTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 180

Query: 181 DMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
           DMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG
Sbjct: 181 DMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240

Query: 241 ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEF 300
           ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEF
Sbjct: 241 ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEF 300

Query: 301 IVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKV 360
           IVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKV
Sbjct: 301 IVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKV 360

Query: 361 RWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSK 420
           RWDETSTIPRPERVS WKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSK
Sbjct: 361 RWDETSTIPRPERVSPWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSK 420

Query: 421 LNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASR 480
           LNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASR
Sbjct: 421 LNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASR 480

Query: 481 RYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKSVLDQEGKFNLVAR 540
           RYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKSVLDQEGKFNLVAR
Sbjct: 481 RYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKSVLDQEGKFNLVAR 540

Query: 541 PWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLM 600
           PWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLM
Sbjct: 541 PWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLM 600

Query: 601 PPLPPSNFENSAHSRELMPKSAMVQDQEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMN 660
           PPLPPSNFENSAHSRELMPKSAMVQDQEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMN
Sbjct: 601 PPLPPSNFENSAHSRELMPKSAMVQDQEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMN 660

Query: 661 EPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGST 720
           EPAGNLDQQFRAFESDQKS+HSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGST
Sbjct: 661 EPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGST 720

Query: 721 RSCTKV 726
           RSCTKV
Sbjct: 721 RSCTKV 726


>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
          Length = 840

 Score = 1123 bits (2905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/728 (77%), Positives = 613/728 (84%), Gaps = 16/728 (2%)

Query: 4   AASSSEVSMKSCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPRE 63
           A +SSE+S+KS NET + PME     +           E ALY ELWHACAGPLVTVPR+
Sbjct: 3   ATASSELSIKSSNETSKSPMEEDKDLNL----------ETALYKELWHACAGPLVTVPRQ 52

Query: 64  GERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTL 123
           GERVYYFPQGHIEQVEASTNQ ADQQMP+YDL SKILCRVINVQLKA+PDTDEVFAQ+TL
Sbjct: 53  GERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKILCRVINVQLKAKPDTDEVFAQITL 112

Query: 124 LPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS 183
           LPE NQDENAVEKEPPPP  PRFHVHSFCKTLTASDTSTHGGFSVLRRHA+ECLP LDMS
Sbjct: 113 LPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHGGFSVLRRHAEECLPELDMS 172

Query: 184 RQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENG 243
           +QPPTQ+L AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR E  
Sbjct: 173 QQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRCEK- 231

Query: 244 ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
           ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR SP+EFIVP
Sbjct: 232 ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRISPAEFIVP 291

Query: 304 YDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWD 363
           +DQYMES+K+NYSIGM F+MRFEGEEAPEQR+TGTIVGIEDADPQRW DSKWRCLKVRWD
Sbjct: 292 FDQYMESVKSNYSIGMGFEMRFEGEEAPEQRYTGTIVGIEDADPQRWPDSKWRCLKVRWD 351

Query: 364 ETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNV 423
           ETST+PRPERVS WKIEPALAP ALN LP+ RPKRPRSNM+PSSPDSSVLTREGS K+NV
Sbjct: 352 ETSTVPRPERVSPWKIEPALAPLALNPLPLSRPKRPRSNMVPSSPDSSVLTREGSFKVNV 411

Query: 424 DPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYG 483
           DPSSATGFSRVLQGQEFSTLRGNFAER+SNE DTAEKSVV P SLDD+KIDVV ASRRYG
Sbjct: 412 DPSSATGFSRVLQGQEFSTLRGNFAERDSNEFDTAEKSVVRPSSLDDKKIDVVFASRRYG 471

Query: 484 SENWVPPGRHEPVYTDLLSGFGANADPSHGFS----SPFADAVPVRKSVLDQEGKFNLVA 539
            EN VP GR EP+ TDLLSG G N+D  HG+S       A AVPVRKS+L QEGKFN++ 
Sbjct: 472 FENCVPAGRSEPMCTDLLSGLGTNSDSVHGYSPSIDQSLASAVPVRKSLLSQEGKFNMLG 531

Query: 540 RPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWL 599
            PWSLMPS  SLKMPE+NAKV VQGGD+NY V+GN RYGG  DYP L  +RV  S+GNW 
Sbjct: 532 SPWSLMPSSLSLKMPETNAKVQVQGGDINYLVQGNARYGGLSDYPTLQSHRVGPSNGNWF 591

Query: 600 MPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSKDCKLFGIPLFSNH-VMPEPVVSHRNT 658
           MPPL  S+FEN   SRELM K   VQ  EAGK+KDCKLFGIPL S+  V PEP++ H+N+
Sbjct: 592 MPPLVSSHFENLVPSRELMEKPISVQHHEAGKTKDCKLFGIPLVSSSCVTPEPILLHQNS 651

Query: 659 MNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCG 718
           MNEP G+++ Q    ESD KS+ SKS  LA+D+   +E  KPSQ  Q H KDV SK Q G
Sbjct: 652 MNEPVGHMNHQLGVLESDPKSEQSKSPTLANDSNCVSEQGKPSQTCQPHVKDVHSKPQSG 711

Query: 719 STRSCTKV 726
           S+RSCTKV
Sbjct: 712 SSRSCTKV 719


>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
 gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 1110 bits (2872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/709 (79%), Positives = 605/709 (85%), Gaps = 11/709 (1%)

Query: 24  EGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN 83
           EGQ  +S+ SG  +  D E ALYTELWHACAGPLVTVPRE ERV+YFPQGHIEQVEASTN
Sbjct: 38  EGQKGHSSVSGAGK--DFETALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTN 95

Query: 84  QVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP 143
           QV+DQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE NQDE A EKEP PPPP
Sbjct: 96  QVSDQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPP 155

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
           PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLP LDMSRQPPTQEL AKDLHGNEWRF
Sbjct: 156 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRF 215

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
           RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV
Sbjct: 216 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 275

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKM 323
           ISSHSMHLGVLATAWHA STGTMFTVYYKPRTSP+EFIVP+DQYMES+KNNYSIGMRFKM
Sbjct: 276 ISSHSMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKM 335

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
           RFEGEEAPEQRFTGTIVGIEDADP+RWRDSKWRCLKVRWDETSTIPRP+RVS WKIEPA+
Sbjct: 336 RFEGEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAV 395

Query: 384 APPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTL 443
            PPALN LP+PRPKRPRSNM+PSSPDSSVLTREGSSK+ VDPS A+GFSRVLQGQEFSTL
Sbjct: 396 TPPALNPLPVPRPKRPRSNMVPSSPDSSVLTREGSSKVTVDPSPASGFSRVLQGQEFSTL 455

Query: 444 RGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSG 503
           RG FA  ESNESDTAEKSVVWPP LDDEKIDVVS SRR+GS+NW+   RHEP  TDLLSG
Sbjct: 456 RGTFA--ESNESDTAEKSVVWPPLLDDEKIDVVSTSRRFGSDNWMHLVRHEPTCTDLLSG 513

Query: 504 FGANADPSHGFSSPFAD----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAK 559
           FGA  D SHGFSS F D    A    K  L+ E KFNL+A PWS+MPSG SL + ES+ K
Sbjct: 514 FGARTDSSHGFSS-FVDQNDVAANTMKKHLEHESKFNLLAGPWSMMPSGLSLNLLESSIK 572

Query: 560 VPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMP 619
           VPVQG D+ YQ RG+ R+GGF +YP L+G+RVE   GNWLMPP   S+FEN AHSRELMP
Sbjct: 573 VPVQGSDMPYQTRGDARFGGFSEYPTLHGHRVELQQGNWLMPPPAQSHFENFAHSRELMP 632

Query: 620 KSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQ 677
           K  +VQ QEA K KD  CKLFGIPL  N V+ EP +S+R+  NEPAG+L     AF+SDQ
Sbjct: 633 KPILVQKQEAVKPKDGNCKLFGIPLIGNPVISEPAMSYRSMTNEPAGHLHLAPSAFDSDQ 692

Query: 678 KSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           KS+ SK +K  D+    +E EKP Q S   ++DV+ K Q  STRSCTKV
Sbjct: 693 KSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSVSTRSCTKV 741


>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
          Length = 946

 Score = 1109 bits (2869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 561/711 (78%), Positives = 606/711 (85%), Gaps = 11/711 (1%)

Query: 24  EGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN 83
           EGQ  +S+ SG  +  D E ALYTELWHACAGPLVTVPRE ERV+YFPQGHIEQVEASTN
Sbjct: 38  EGQKGHSSVSGAGK--DFETALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTN 95

Query: 84  QVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP 143
           QV+DQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE NQDE A EKEP PPPP
Sbjct: 96  QVSDQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPP 155

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
           PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLP LDMSRQPPTQEL AKDLHGNEWRF
Sbjct: 156 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRF 215

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
           RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV
Sbjct: 216 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 275

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKM 323
           ISSHSMHLGVLATAWHA STGTMFTVYYKPRTSP+EFIVP+DQYMES+KNNYSIGMRFKM
Sbjct: 276 ISSHSMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKM 335

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
           RFEGEEAPEQRFTGTIVGIEDADP+RWRDSKWRCLKVRWDETSTIPRP+RVS WKIEPA+
Sbjct: 336 RFEGEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAV 395

Query: 384 APPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTL 443
            PPALN LP+PRPKRPRSNM+PSSPDSSVLTREGSSK+ VDPS A+GFSRVLQGQEFSTL
Sbjct: 396 TPPALNPLPVPRPKRPRSNMVPSSPDSSVLTREGSSKVTVDPSPASGFSRVLQGQEFSTL 455

Query: 444 RGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSG 503
           RG FA  ESNESDTAEKSVVWPP LDDEKIDVVS SRR+GS+NW+   RHEP  TDLLSG
Sbjct: 456 RGTFA--ESNESDTAEKSVVWPPLLDDEKIDVVSTSRRFGSDNWMHLVRHEPTCTDLLSG 513

Query: 504 FGANADPSHGFSSPFAD----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAK 559
           FGA  D SHGFSS F D    A    K  L+ E KFNL+A PWS+MPSG SL + ES+ K
Sbjct: 514 FGARTDSSHGFSS-FVDQNDVAANTMKKHLEHESKFNLLAGPWSMMPSGLSLNLLESSIK 572

Query: 560 VPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMP 619
           VPVQG D+ YQ RG+ R+GGF +YP L+G+RVE   GNWLMPP   S+FEN AHSRELMP
Sbjct: 573 VPVQGSDMPYQTRGDARFGGFSEYPTLHGHRVELQQGNWLMPPPAQSHFENFAHSRELMP 632

Query: 620 KSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQ 677
           K  +VQ QEA K KD  CKLFGIPL  N V+ EP +S+R+  NEPAG+L     AF+SDQ
Sbjct: 633 KPILVQKQEAVKPKDGNCKLFGIPLIGNPVISEPAMSYRSMTNEPAGHLHLAPSAFDSDQ 692

Query: 678 KSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVPL 728
           KS+ SK +K  D+    +E EKP Q S   ++DV+ K Q  STRSCTKV +
Sbjct: 693 KSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSVSTRSCTKVCI 743


>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
 gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score = 1076 bits (2783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/715 (76%), Positives = 599/715 (83%), Gaps = 22/715 (3%)

Query: 23  MEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           MEGQ  +ST     R  D E ALY ELWHACAGPLVTVPREG+ V+YFPQGH+EQVEAST
Sbjct: 30  MEGQKGHSTHPSSAR--DAETALYNELWHACAGPLVTVPREGDHVFYFPQGHLEQVEAST 87

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQVADQQMP+YDLP KILCRV+NVQLKAEPDTDEVFAQVTLLP  NQDENA EKEPPPPP
Sbjct: 88  NQVADQQMPLYDLPPKILCRVVNVQLKAEPDTDEVFAQVTLLPLHNQDENASEKEPPPPP 147

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG+EWR
Sbjct: 148 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWR 207

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSS
Sbjct: 208 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSS 267

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSP+EFIVP+DQYMES+K+NYSIGMRFK
Sbjct: 268 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKSNYSIGMRFK 327

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIEDADP RW+DSKWRCLKVRWDETSTIPRP+RVS WKIEPA
Sbjct: 328 MRFEGEEAPEQRFTGTIVGIEDADPSRWKDSKWRCLKVRWDETSTIPRPDRVSPWKIEPA 387

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPALN LPMPRPKRPR+NM+PSSPDSSVLTREGSSK+  DPSSA+GFSRVL+GQEFST
Sbjct: 388 LAPPALNPLPMPRPKRPRANMVPSSPDSSVLTREGSSKVTADPSSASGFSRVLRGQEFST 447

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLS 502
           LRGNF   E NESD AEKSV+WPPS DDEKIDV+S+SRR+GSE W+   R EP YTDLLS
Sbjct: 448 LRGNF--EEGNESDVAEKSVLWPPSADDEKIDVLSSSRRFGSEWWISSARQEPTYTDLLS 505

Query: 503 GFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           GFGANAD SHGF +PF D     A P++K + DQ G+FNL+A PWS+M  G SLK+ ESN
Sbjct: 506 GFGANADSSHGFGAPFVDQTAGGANPMKKHLSDQ-GQFNLLASPWSIMSPGLSLKLSESN 564

Query: 558 AKVPVQG-GDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRE 616
           ++VP+QG  DV YQ R N+RY  F +YPML+G RVE SHGN +MPP PPS+F+N AH+RE
Sbjct: 565 SRVPIQGSSDVTYQSRENIRYSAFSEYPMLHGLRVEQSHGNCMMPP-PPSHFDNHAHTRE 623

Query: 617 LMPKSAMVQDQEAGKSKD--CKLFGIPL-FSNHVMPEPVVSHRNTMNEPAGNLDQQFRAF 673
           L+PK  +VQ+   GKS D  CKLFGIPL  S    PE      N +NEP G+        
Sbjct: 624 LIPKPKLVQEHNTGKSLDGNCKLFGIPLKISKPATPEQ-AGPTNMVNEPMGHTQPASHQL 682

Query: 674 --ESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             ESDQKS+HS+ SKLAD+    NE+EKP Q      +D   K Q  STRSCTKV
Sbjct: 683 TSESDQKSEHSRGSKLADE----NENEKPLQVGHMRMRDSHGKAQNSSTRSCTKV 733


>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 858

 Score = 1033 bits (2672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/749 (71%), Positives = 593/749 (79%), Gaps = 39/749 (5%)

Query: 6   SSSEVSMKSCNETGRIPMEGQNSNSTTSGVKRVG-----------------DPEMALYTE 48
           ++SEVS+K  +  G+    G NS+   +   R G                 D E ALY E
Sbjct: 2   ATSEVSIKGNSVNGK----GDNSSGGYTNDVRNGSGGGEARNSSSSSSSARDAEAALYRE 57

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           LWHACAGPLVTVPREGERV+YFPQGHIEQVEASTNQVA+Q MPVYDLP KILCRVINV L
Sbjct: 58  LWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVINVML 117

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSV 168
           KAEPDTDEVFAQVTLLPE NQDENAVEKE PP  PPRFHVHSFCKTLTASDTSTHGGFSV
Sbjct: 118 KAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAAPPRFHVHSFCKTLTASDTSTHGGFSV 177

Query: 169 LRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 228
           LRRHADECLPPLDM++QPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKR
Sbjct: 178 LRRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 237

Query: 229 LVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFT 288
           LVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA+ TGTMFT
Sbjct: 238 LVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFT 297

Query: 289 VYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQ 348
           VYYKPRTSP+EFIVPYDQYMES+KNNY+IGMRFKMRFEGEEAPEQRFTGTIVGIEDAD +
Sbjct: 298 VYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADTK 357

Query: 349 RWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSP 408
           RW  SKWR LKVRWDETS IPRPERVS WKIEPALAPPALN LPMPRPKRPRSN++PSSP
Sbjct: 358 RWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALAPPALNPLPMPRPKRPRSNVVPSSP 417

Query: 409 DSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSL 468
           DSSVLTRE SSK++VDP   +GF RVLQGQE STLRGNFA  ESNESDT EKS VWPP  
Sbjct: 418 DSSVLTREASSKVSVDPLPTSGFQRVLQGQELSTLRGNFA--ESNESDTVEKSAVWPPVA 475

Query: 469 DDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----AVP 523
           DDEKID VS SRRYGS++W+  GRHE  Y DLLSGFG + D  H     F D     A  
Sbjct: 476 DDEKID-VSTSRRYGSDSWMSMGRHELTYPDLLSGFGTHGD--HSSHPSFVDQNGPVANV 532

Query: 524 VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRY-GGFGD 582
            RK +LD EGK N+++ PWS +PS  SL + +SN K   QGGD  YQVRGN+RY   FG+
Sbjct: 533 GRKHLLDCEGKHNVLS-PWSGVPSSLSLNLLDSNTKGSAQGGDTTYQVRGNLRYSSAFGE 591

Query: 583 YPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK--DCKLFGI 640
           YPML+G++VEHSHGN+LMPP PPS    S  SREL+PK    +  E  K K  DCKLFGI
Sbjct: 592 YPMLHGHKVEHSHGNFLMPP-PPSTPYESPRSRELLPKPISGKPCEVSKPKDSDCKLFGI 650

Query: 641 PLFSNHVMPEPVVSHRNTMNEPAGNL---DQQFRAFESDQKSDHSKSSKLADDNQVFNEH 697
            L S+ + PEP VS RN  +EP G++     Q RAF++DQKS+HS+      D  + ++H
Sbjct: 651 SLLSSPIAPEPSVSQRNVPSEPVGHMHTTSHQQRAFDNDQKSEHSRGGSKPADGLLIDDH 710

Query: 698 EKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           EK  Q SQTH KD+++K+  GS RSCTKV
Sbjct: 711 EKVLQTSQTHLKDIQAKSHSGSARSCTKV 739


>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
 gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
          Length = 844

 Score = 1028 bits (2658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/713 (74%), Positives = 588/713 (82%), Gaps = 26/713 (3%)

Query: 21  IPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEA 80
           + MEGQ  +ST     +  D E ALYTELW+ACAGPLVTVPRE E VYYFPQGHIEQVEA
Sbjct: 30  VAMEGQKGHSTRPVSAK--DAEKALYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEA 87

Query: 81  STNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP 140
           STNQ+ADQQMPVY+LPSKILCRVINVQLKAEPDTDEVFAQVTLLPE  QDENAV+K+PP 
Sbjct: 88  STNQLADQQMPVYNLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPIQDENAVKKDPPQ 147

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
           PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL          + + +     
Sbjct: 148 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL--------VSINSTEFVRCL 199

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 260
                +  GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP
Sbjct: 200 IDIIMLIPGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 259

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
           SSVISSHSMHLGVLATAWHA+STGT+FTVYYKPRTSP+EFIVP+D+YMES+KNNY IGMR
Sbjct: 260 SSVISSHSMHLGVLATAWHAISTGTLFTVYYKPRTSPAEFIVPFDRYMESVKNNYCIGMR 319

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           FKMRFEGEEAPEQRFTGTIVGIEDAD +RWR+SKWR LKVRWDETSTIPRP+RVS W +E
Sbjct: 320 FKMRFEGEEAPEQRFTGTIVGIEDADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVE 379

Query: 381 PALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           PALAPPALN LP+PRPKRPRSNM+PSSPDSSVLTR+GSSK+ +DP   +G+SRVLQGQEF
Sbjct: 380 PALAPPALNPLPVPRPKRPRSNMVPSSPDSSVLTRDGSSKVTIDPPPPSGYSRVLQGQEF 439

Query: 441 STLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDL 500
           STLRGNFA  ESNES+TAEKSV+WPPS+DDEKID VSASRR+GSE+W   GR EP YTDL
Sbjct: 440 STLRGNFA--ESNESETAEKSVMWPPSVDDEKID-VSASRRHGSESWNLSGRPEPTYTDL 496

Query: 501 LSGFGANADPSHGFSSPFADAVPV---RKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           LSGFG+NAD SHGF+S F D       RK VLDQEGKFNL+A PWSLM SG SLK+ ESN
Sbjct: 497 LSGFGSNADSSHGFTSSFVDQAATAASRKLVLDQEGKFNLLANPWSLMSSGLSLKLSESN 556

Query: 558 AKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSREL 617
            KV VQG D+ YQ RGN+R   F +YP+L+G+RV+ SHGNWLMPP PPS+F+N AH+RE 
Sbjct: 557 TKVSVQGRDIPYQARGNIRCSAFSEYPILHGHRVDQSHGNWLMPPPPPSHFDNLAHARE- 615

Query: 618 MPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQ--QFRAF 673
            P S  +Q+ + GKS D  CKLFGIPLFSN V PEP  SHRN +NEP     Q  Q RA 
Sbjct: 616 -PVSKPLQEHDIGKSTDGNCKLFGIPLFSNPVAPEPATSHRNMVNEPTTAHPQSHQPRAL 674

Query: 674 ESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           ESDQ+S+  + SK+ADD    NEHEK  Q    HT+D++ KTQ GSTRSCTKV
Sbjct: 675 ESDQRSEQPRVSKMADD----NEHEKQFQSGHLHTRDIQGKTQTGSTRSCTKV 723


>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
 gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score = 1026 bits (2654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/714 (76%), Positives = 597/714 (83%), Gaps = 23/714 (3%)

Query: 23  MEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           MEGQ ++ST     RV D E ALY ELWHACAGPLVTVPREG+RV+YFPQGHIEQVEAST
Sbjct: 30  MEGQKNHSTHPSSARVVDAETALYNELWHACAGPLVTVPREGDRVFYFPQGHIEQVEAST 89

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQVADQQMP+Y+L  KILCRV+NVQLKAEPDTDEVFAQVTLLPE NQDE+ +EKEPPPPP
Sbjct: 90  NQVADQQMPLYNLLPKILCRVVNVQLKAEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPP 149

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHGNEWR
Sbjct: 150 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWR 209

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 210 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 269

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHAVSTGT+FTVYYKPRTSP+EFIVP+DQYMES+KNNYSIGMRFK
Sbjct: 270 VISSHSMHLGVLATAWHAVSTGTLFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFK 329

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIEDADP RW++SKWRCLKVRWDETST+PRPERVS WKIEPA
Sbjct: 330 MRFEGEEAPEQRFTGTIVGIEDADPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIEPA 389

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPALN LP+PRPKRPR+NM+PSSPDSSVLTR+GS K+  DP SA+GFSRVLQGQEFST
Sbjct: 390 LAPPALNPLPLPRPKRPRANMVPSSPDSSVLTRDGSFKVTADPPSASGFSRVLQGQEFST 449

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLS 502
           LRG FA  ESNES+ AEKSV+WP S DDEKIDV+S SRR+GSE W+   RHEP  TDLLS
Sbjct: 450 LRGTFA--ESNESNAAEKSVMWPSSADDEKIDVLSTSRRFGSERWMSSARHEPTCTDLLS 507

Query: 503 GFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           GFG N+D  HGF +PF D     A P +K + DQ G+FNL+A PWS+M SG  LK+ ESN
Sbjct: 508 GFGTNSDSFHGFGAPFVDQTAVAANPTKKHLSDQ-GQFNLLASPWSIMSSGLLLKLSESN 566

Query: 558 AKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSREL 617
            KVPVQG DV YQ R NV    F +YP+L G+RVE SH NW+M P PPS+F+N A+SREL
Sbjct: 567 TKVPVQGSDVTYQARANV----FSEYPVLQGHRVEQSHKNWMMHP-PPSHFDNHANSREL 621

Query: 618 MPKSAMVQDQEAGKS--KDCKLFGIPL-FSNHVMPEPVVSHRNTMNEPAGNLD--QQFRA 672
           MPK  ++Q+ ++GKS   +CKLFGIPL  S  V PE       TMNEP  ++        
Sbjct: 622 MPKPVLMQEHDSGKSLEGNCKLFGIPLKISKPVAPE-AAGTTITMNEPLSHIQPVSHQLT 680

Query: 673 FESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           FESDQKS+ SK SK+ D+    NE+EKP Q     TKD   K Q GSTRSCTKV
Sbjct: 681 FESDQKSEQSKGSKMTDE----NENEKPFQAGHLRTKDNHGKAQNGSTRSCTKV 730


>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score = 1016 bits (2627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/722 (72%), Positives = 586/722 (81%), Gaps = 19/722 (2%)

Query: 18  TGRIPMEGQNSNSTTSGVKR------VGDPEMALYTELWHACAGPLVTVPREGERVYYFP 71
           +  + M+G   N    G           D E AL+ ELWHACAGPLVTVPRE ERV+YFP
Sbjct: 3   SSEVTMKGNCLNHNDGGATEPHSPSTAKDAEAALFRELWHACAGPLVTVPREKERVFYFP 62

Query: 72  QGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE 131
           QGHIEQVEASTNQVADQ MPVYDLP KILCRVINVQLKAEPDTDEVFAQVTLLPE NQDE
Sbjct: 63  QGHIEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDE 122

Query: 132 NAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 191
           NAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+QPPTQEL
Sbjct: 123 NAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQEL 182

Query: 192 AAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 251
            AKDLH NEWRF+HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR
Sbjct: 183 VAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 242

Query: 252 AMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI 311
           AMRQQGNVPSSVISSHSMHLGVLATAWHA+ TGT+FTVYYKPRTSP+EFIVPYDQYMES+
Sbjct: 243 AMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESL 302

Query: 312 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
           KN+YSIGMRFKMRFEGEEAPEQRFTGT+VGIED+DP+RWRDSKWRCLKVRWDETS  PRP
Sbjct: 303 KNSYSIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDPKRWRDSKWRCLKVRWDETSNTPRP 362

Query: 372 ERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGF 431
           ERVS WKIEPALAPPALN L MPRPKRPRSN +PSSPDSSVLTRE SSK+++DPS A GF
Sbjct: 363 ERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREASSKVSIDPSPANGF 422

Query: 432 SRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPS-LDDEKIDVVSASRRYGSENWVPP 490
            RVLQGQEFSTLRGNF   ESNE DTAEKSVVWPP+ +DDEK+D VS SR+YGSE+W+  
Sbjct: 423 PRVLQGQEFSTLRGNFT--ESNEFDTAEKSVVWPPTAVDDEKMD-VSTSRKYGSESWMSM 479

Query: 491 GRHEPVYTDLLSGFGANADPSH-GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGP 549
           GR+EP Y+DLLSGFG + DPSH       + A   RK  LD EGK ++   PW +MPS  
Sbjct: 480 GRNEPTYSDLLSGFGTSGDPSHSSLKDQMSPAYSARKQSLDHEGKLHM-PHPWPVMPSSL 538

Query: 550 SLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFE 609
           SL + +SNAK P  GGD ++Q RGN+R+  FG+YP L+G++VE SHGN + PP  P    
Sbjct: 539 SLNILDSNAKGPTHGGDTSFQARGNLRFSAFGEYPALHGHKVEDSHGNLMPPPPAPQTQY 598

Query: 610 NSAHSRELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLD 667
            S  SRELM K    +  EA K K  DCKLFG  L S  ++PEP +S RN ++EPAG + 
Sbjct: 599 QSPCSRELMSKHVSAKTCEAVKPKDGDCKLFGFSLISGPIVPEPSLSQRN-VSEPAGQMH 657

Query: 668 ---QQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCT 724
               Q R  E+D+KSDHSK S+   D+ V ++H++P Q SQ+HTKDV++K   GS RSCT
Sbjct: 658 LTAHQQRTSENDEKSDHSKGSR-PVDDLVVDDHDRPLQTSQSHTKDVQAKPLSGSARSCT 716

Query: 725 KV 726
           KV
Sbjct: 717 KV 718


>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score = 1008 bits (2605), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/696 (75%), Positives = 579/696 (83%), Gaps = 17/696 (2%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           D E AL+ ELWHACAGPLVTVPRE ERV+YFPQGHIEQVEASTNQVADQ MPVYDLP KI
Sbjct: 31  DAEAALFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKI 90

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           LCRVINVQLKAEPDTDEVFAQVTLLPE NQDENAVEKEPPPPPPPRFHVHSFCKTLTASD
Sbjct: 91  LCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 150

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMS+QPPTQEL AKDLH NEWRF+HIFRGQPRRHLLQSG
Sbjct: 151 TSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSG 210

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH
Sbjct: 211 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 270

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           A+STGT+FTVYYKPRTSP+EFIVPYDQYMES+KNNYSIGMRFKMRFEGEEAPEQRFTGTI
Sbjct: 271 AISTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTI 330

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           VGIED+DP+RWRDSKWRCLKVRWDETS  PRPERVS WKIEPALAPPALN L MPRPKRP
Sbjct: 331 VGIEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRP 390

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           RSN +PSSPDSSVLTRE SSK+++DPS A GF RVLQGQEFSTLRGNFA  ESNESDTAE
Sbjct: 391 RSNAVPSSPDSSVLTREASSKVSIDPSPANGFPRVLQGQEFSTLRGNFA--ESNESDTAE 448

Query: 460 KSVVWPP-SLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSH-GFSSP 517
           KSVVWPP ++DDEK+D VS SRRYGSE+W+  GR+EP Y+DLLSGFGA+ DPSH      
Sbjct: 449 KSVVWPPAAVDDEKMD-VSTSRRYGSESWMSMGRNEPTYSDLLSGFGASGDPSHLSLKDQ 507

Query: 518 FADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRY 577
            + A   RK  LD EGK ++   PW +MPS  SL + +SN K P  GGD  Y+ RGN+RY
Sbjct: 508 MSPAYSARKQSLDHEGKLHM-PHPWPVMPSSLSLSILDSNTKGPAHGGDTTYKARGNLRY 566

Query: 578 GGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFE--NSAHSRELMPKSAMVQDQEAGKSK-- 633
             FG+YP L+G++VEHSHGN LMPP PP+      S  SRELM K    +  EA K K  
Sbjct: 567 SAFGEYPALHGHKVEHSHGN-LMPP-PPALLTQYQSPCSRELMSKQVSAKTCEAVKPKDG 624

Query: 634 DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLD---QQFRAFESDQKSDHSKSSKLADD 690
           DCKLFG  L S   +PEP +S RN ++E A  +     Q R  E+D+K DHSK S+   D
Sbjct: 625 DCKLFGFSLISGPTLPEPSLSQRN-VSEAADQMHLTAHQQRTSENDEKLDHSKGSR-PVD 682

Query: 691 NQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           + V ++ ++P + SQ HTKDV++K   GS RSCTKV
Sbjct: 683 DIVVDDQDRPLRTSQLHTKDVQAKPLSGSARSCTKV 718


>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 821

 Score = 1007 bits (2603), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/732 (71%), Positives = 579/732 (79%), Gaps = 41/732 (5%)

Query: 6   SSSEVSMK--SCNETGRIPMEG----QNSNSTTSGVKRVGDPEMALYTELWHACAGPLVT 59
           +SSEVSMK  S N  G   ++G    QN +S++S  +   + E ALY ELWHACAGPLVT
Sbjct: 2   ASSEVSMKGNSVNGKGENNVDGVGDAQNGSSSSSTGR---EAEAALYRELWHACAGPLVT 58

Query: 60  VPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFA 119
           VPREGE V+YFPQGHIEQVEASTNQ ++Q MPVYDL  KILCRVINV LKAEPDTDEVFA
Sbjct: 59  VPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFA 118

Query: 120 QVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP 179
           QVTL+PE NQDENAVEKE PP PPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP
Sbjct: 119 QVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP 178

Query: 180 LDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           LDMS+QPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR
Sbjct: 179 LDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 238

Query: 240 GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSE 299
           GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV TGTMFTVYYKPRTSP+E
Sbjct: 239 GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAE 298

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLK 359
           FIVPYDQYMES+KNNY+IGMRFKMRFEGEEAPEQRFTGTIVGIED+D +RW  SKWRCLK
Sbjct: 299 FIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLK 358

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDETS IPRPERVS WKIEPALAPPALN LPMPRPKRPR+N++PSSPDSSVLTRE SS
Sbjct: 359 VRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASS 418

Query: 420 KLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSAS 479
           K+++DP   +GF RVLQGQE STLRGN A  ESN+S TAEKSV W P+ D+EK+D VS S
Sbjct: 419 KVSMDPLPTSGFQRVLQGQESSTLRGNLA--ESNDSYTAEKSVAWTPATDEEKMDAVSTS 476

Query: 480 RRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKSVLDQEGKFNLVA 539
           RRYGSENW+P  R EP Y+DLLSGFG+                        +EGK N++ 
Sbjct: 477 RRYGSENWMPMSRQEPTYSDLLSGFGST-----------------------REGKHNMLT 513

Query: 540 RPWSLMPSGPSLKMPESNAKVPVQGGD-VNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNW 598
           + W +MP G SL    SN K   QG D   YQ +GN+RY  FGDY +L+G++VE+ HGN+
Sbjct: 514 Q-WPVMPPGLSLNFLHSNMKGSAQGSDNATYQAQGNMRYSAFGDYSVLHGHKVENPHGNF 572

Query: 599 LMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHR 656
           LMPP PP+ +E S HSREL  K    +  EA K K  DCKLFG  L S+  M EP +S R
Sbjct: 573 LMPPPPPTQYE-SPHSRELSQKQMSAKISEAAKPKDSDCKLFGFSLLSSPTMLEPSLSQR 631

Query: 657 NTMNEPAGNLD--QQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSK 714
           N  +E + ++    Q   FE+DQKS+HSKSSK AD   + +EHEK  Q SQ H KDV+ K
Sbjct: 632 NATSETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLK 691

Query: 715 TQCGSTRSCTKV 726
            Q GS RSCTKV
Sbjct: 692 PQSGSARSCTKV 703


>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 715

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/734 (70%), Positives = 580/734 (79%), Gaps = 41/734 (5%)

Query: 6   SSSEVSMK--SCNETGRIPMEG----QNSNSTTSGVKRVGDPEMALYTELWHACAGPLVT 59
           +SSEVSMK  S N  G   ++G    QN +S++S  +   + E ALY ELWHACAGPLVT
Sbjct: 2   ASSEVSMKGNSVNGKGENNVDGVGDAQNGSSSSSTGR---EAEAALYRELWHACAGPLVT 58

Query: 60  VPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFA 119
           VPREGE V+YFPQGHIEQVEASTNQ ++Q MPVYDL  KILCRVINV LKAEPDTDEVFA
Sbjct: 59  VPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFA 118

Query: 120 QVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP 179
           QVTL+PE NQDENAVEKE PP PPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP
Sbjct: 119 QVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP 178

Query: 180 LDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           LDMS+QPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR
Sbjct: 179 LDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 238

Query: 240 GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSE 299
           GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV TGTMFTVYYKPRTSP+E
Sbjct: 239 GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAE 298

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLK 359
           FIVPYDQYMES+KNNY+IGMRFKMRFEGEEAPEQRFTGTIVGIED+D +RW  SKWRCLK
Sbjct: 299 FIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLK 358

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDETS IPRPERVS WKIEPALAPPALN LPMPRPKRPR+N++PSSPDSSVLTRE SS
Sbjct: 359 VRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASS 418

Query: 420 KLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSAS 479
           K+++DP   +GF RVLQGQE STLRGN A  ESN+S TAEKSV W P+ D+EK+D VS S
Sbjct: 419 KVSMDPLPTSGFQRVLQGQESSTLRGNLA--ESNDSYTAEKSVAWTPATDEEKMDAVSTS 476

Query: 480 RRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKSVLDQEGKFNLVA 539
           RRYGSENW+P  R EP Y+DLLSGFG+                        +EGK N++ 
Sbjct: 477 RRYGSENWMPMSRQEPTYSDLLSGFGST-----------------------REGKHNMLT 513

Query: 540 RPWSLMPSGPSLKMPESNAKVPVQGGD-VNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNW 598
           + W +MP G SL    SN K   QG D   YQ +GN+RY  FGDY +L+G++VE+ HGN+
Sbjct: 514 Q-WPVMPPGLSLNFLHSNMKGSAQGSDNATYQAQGNMRYSAFGDYSVLHGHKVENPHGNF 572

Query: 599 LMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHR 656
           LMPP PP+ +E S HSREL  K    +  EA K K  DCKLFG  L S+  M EP +S R
Sbjct: 573 LMPPPPPTQYE-SPHSRELSQKQMSAKISEAAKPKDSDCKLFGFSLLSSPTMLEPSLSQR 631

Query: 657 NTMNEPAGNLD--QQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSK 714
           N  +E + ++    Q   FE+DQKS+HSKSSK AD   + +EHEK  Q SQ H KDV+ K
Sbjct: 632 NATSETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLK 691

Query: 715 TQCGSTRSCTKVPL 728
            Q GS RSCTKV +
Sbjct: 692 PQSGSARSCTKVSI 705


>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 766

 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/732 (71%), Positives = 579/732 (79%), Gaps = 41/732 (5%)

Query: 6   SSSEVSMK--SCNETGRIPMEG----QNSNSTTSGVKRVGDPEMALYTELWHACAGPLVT 59
           +SSEVSMK  S N  G   ++G    QN +S++S  +   + E ALY ELWHACAGPLVT
Sbjct: 2   ASSEVSMKGNSVNGKGENNVDGVGDAQNGSSSSSTGR---EAEAALYRELWHACAGPLVT 58

Query: 60  VPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFA 119
           VPREGE V+YFPQGHIEQVEASTNQ ++Q MPVYDL  KILCRVINV LKAEPDTDEVFA
Sbjct: 59  VPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFA 118

Query: 120 QVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP 179
           QVTL+PE NQDENAVEKE PP PPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP
Sbjct: 119 QVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPP 178

Query: 180 LDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           LDMS+QPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR
Sbjct: 179 LDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 238

Query: 240 GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSE 299
           GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV TGTMFTVYYKPRTSP+E
Sbjct: 239 GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAE 298

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLK 359
           FIVPYDQYMES+KNNY+IGMRFKMRFEGEEAPEQRFTGTIVGIED+D +RW  SKWRCLK
Sbjct: 299 FIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLK 358

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDETS IPRPERVS WKIEPALAPPALN LPMPRPKRPR+N++PSSPDSSVLTRE SS
Sbjct: 359 VRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASS 418

Query: 420 KLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSAS 479
           K+++DP   +GF RVLQGQE STLRGN A  ESN+S TAEKSV W P+ D+EK+D VS S
Sbjct: 419 KVSMDPLPTSGFQRVLQGQESSTLRGNLA--ESNDSYTAEKSVAWTPATDEEKMDAVSTS 476

Query: 480 RRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKSVLDQEGKFNLVA 539
           RRYGSENW+P  R EP Y+DLLSGFG+                        +EGK N++ 
Sbjct: 477 RRYGSENWMPMSRQEPTYSDLLSGFGST-----------------------REGKHNMLT 513

Query: 540 RPWSLMPSGPSLKMPESNAKVPVQGGD-VNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNW 598
           + W +MP G SL    SN K   QG D   YQ +GN+RY  FGDY +L+G++VE+ HGN+
Sbjct: 514 Q-WPVMPPGLSLNFLHSNMKGSAQGSDNATYQAQGNMRYSAFGDYSVLHGHKVENPHGNF 572

Query: 599 LMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHR 656
           LMPP PP+ +E S HSREL  K    +  EA K K  DCKLFG  L S+  M EP +S R
Sbjct: 573 LMPPPPPTQYE-SPHSRELSQKQMSAKISEAAKPKDSDCKLFGFSLLSSPTMLEPSLSQR 631

Query: 657 NTMNEPAGNLD--QQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSK 714
           N  +E + ++    Q   FE+DQKS+HSKSSK AD   + +EHEK  Q SQ H KDV+ K
Sbjct: 632 NATSETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLK 691

Query: 715 TQCGSTRSCTKV 726
            Q GS RSCTKV
Sbjct: 692 PQSGSARSCTKV 703


>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 851

 Score = 1001 bits (2589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/694 (74%), Positives = 570/694 (82%), Gaps = 21/694 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LY ELWHACAGPLVTVPRE ERV+YFPQGHIEQVEASTNQVA+Q MPVYDLP KILCRVI
Sbjct: 48  LYRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVI 107

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           NV LKAEPDTDEVFAQVTLLPE NQDENAVEKE PP PPPRFHVHSFCKTLTASDTSTHG
Sbjct: 108 NVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHG 167

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLRRHADECLPPLDMS+QPPTQEL AKDLH NEWRFRHIFRGQPRRHLLQSGWSVFV
Sbjct: 168 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 227

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA+ TG
Sbjct: 228 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 287

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           TMFTVYYKPRTSP+EFIVPYDQYMES+KNNY+IGMRFKMRFEGEEAPEQRFTGTIVGIED
Sbjct: 288 TMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIED 347

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNML 404
           AD +RW  SKWR LKVRWDETS IPRPERVS WKIEPALAP ALN LPMPRPKRPRSN++
Sbjct: 348 ADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALAPLALNPLPMPRPKRPRSNVV 407

Query: 405 PSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVW 464
           PSSPDSSVLTRE +SK++VDP   +GF RVLQGQE STLRGNFA  ESNESDTAEKS VW
Sbjct: 408 PSSPDSSVLTRE-ASKVSVDPLPTSGFQRVLQGQELSTLRGNFA--ESNESDTAEKSGVW 464

Query: 465 PPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD---- 520
           PP+ DDEKID VS SRRYGS++W+  GRHEP Y DLLSGFGA+ D  H     F D    
Sbjct: 465 PPATDDEKID-VSTSRRYGSDSWMSMGRHEPTYPDLLSGFGAHGD--HSSHPSFVDQNGP 521

Query: 521 -AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRY-G 578
            A   RK +LD+EGK N+++ PW  +PS  SL + +SN K   QGGD  YQVRGN+RY  
Sbjct: 522 VANLSRKHLLDREGKHNVLS-PWPGVPSSLSLNLLDSNLKGSAQGGDTAYQVRGNLRYSS 580

Query: 579 GFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK--DCK 636
            FG+YP+L+G++VEHSH ++LMPP PPS    S  SREL+ K    +  E  K K  DCK
Sbjct: 581 AFGEYPVLHGHKVEHSHRSFLMPP-PPSTQYESPRSRELLSKPISGKPCEVSKLKDSDCK 639

Query: 637 LFGIPLFSNH-VMPEPVVSHRNTMNEPAGNL---DQQFRAFESDQKSDHSKSSKLADDNQ 692
           LFGI L S+  +  EP +S RN  +E  G++       RA E+DQKS+HS+ SK A D  
Sbjct: 640 LFGISLLSSRPIASEPSLSQRNVTSESVGHMHTASHHQRAIENDQKSEHSRGSKPA-DGL 698

Query: 693 VFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           + ++HEK  Q SQ H KDV++K+  GS RSCTKV
Sbjct: 699 LIDDHEKVLQTSQPHLKDVQAKSHSGSARSCTKV 732


>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
          Length = 840

 Score =  995 bits (2572), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/698 (71%), Positives = 573/698 (82%), Gaps = 24/698 (3%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           D ++ALYTELW+ACAGPLV+VPRE ERV+YFPQGHIEQVEAST+QVADQQMPVY+LPSKI
Sbjct: 36  DADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKI 95

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           LCRVINV LKAEP+TDEVFAQ+TLLPE+NQDE+AV+KEPPPPPP RFHVHSFCKTLTASD
Sbjct: 96  LCRVINVHLKAEPETDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASD 155

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSG
Sbjct: 156 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSG 215

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ GNVPSSVISSHSMHLGVLATAWH
Sbjct: 216 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWH 275

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           A+STGTMFTVYYKPRTSPSEFIVPYDQYMESIK +Y+IGMRFKMRFEGEEAPEQRFTGTI
Sbjct: 276 AISTGTMFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTI 335

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           +G EDADP+RW+DSKWRCLKVRWDETSTI RPE+VS WKIEPALAPPALN LPM RPKRP
Sbjct: 336 IGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRP 395

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           RSNM+ +SPDSSVLTREGSS++ VDPS A+ F+RVLQGQEFSTLRGNF   + ++ D AE
Sbjct: 396 RSNMVSTSPDSSVLTREGSSRVTVDPSPASVFTRVLQGQEFSTLRGNFI--DGSDPDVAE 453

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFA 519
           KSV+WPPSLDDEK+DVVS S+++G+++W+PPGR EP Y DLLSGFGA+ D S G  +   
Sbjct: 454 KSVMWPPSLDDEKVDVVSTSKKHGADSWIPPGRSEPTYADLLSGFGADMDSSLGVRAAMG 513

Query: 520 D-----AVPVRKSVLDQEGKFNLV-ARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRG 573
           D     A  +RK  ++Q+GKF+ +    WS++PSG SL + +S+ K  ++ GD++YQVRG
Sbjct: 514 DSAVVTANSIRKHAMEQDGKFSFLGGSSWSVLPSGLSLNLVDSSQKGHIRAGDLSYQVRG 573

Query: 574 NVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK 633
           N  + GFGD+ + +  R E  HGNWLMPP P S+F+   HS ELM K  + Q+Q+  K K
Sbjct: 574 NATFNGFGDHSISHCPRTEQPHGNWLMPP-PSSHFDYPIHSSELMSKPMLFQNQDILKPK 632

Query: 634 D--CKLFGIPLFSNHVMPEPVVSHRNTMNEPA---GNLDQQFRAFESDQKSDHSKSSKLA 688
           D  CKLFGI L  N  +P+PV  +RN MNE      N+  Q  + ES  KS+  + SKLA
Sbjct: 633 DGNCKLFGISLVKNPAIPDPVGLNRNMMNEADVMHSNV-HQIHSIESGLKSELPRGSKLA 691

Query: 689 DDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D +   +E +K  Q           K+Q  S RSCTKV
Sbjct: 692 DKSVAISEADKLQQ---------TCKSQGTSARSCTKV 720


>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
          Length = 839

 Score =  987 bits (2552), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/698 (71%), Positives = 571/698 (81%), Gaps = 25/698 (3%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           D ++ALYTELW+ACAGPLV+VPRE ERV+YFPQGHIEQVEAST+QVADQQMPVY+LPSKI
Sbjct: 36  DADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKI 95

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           LCRVINV LKAEPDTDEVFAQ+TLLPE+NQDE+AV+KEPPPPPP RFHVHSFCKTLTASD
Sbjct: 96  LCRVINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASD 155

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSG
Sbjct: 156 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSG 215

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ GNVPSSVISSHSMHLGVLATAWH
Sbjct: 216 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWH 275

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           A+STGT+FTVYYKPRTSPSEFIVPYDQYMESIK +Y+IGMRFKMRFEGEEAPEQRFTGTI
Sbjct: 276 AISTGTLFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTI 335

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           +G EDADP+RW+DSKWRCLKVRWDETSTI RPE+VS WKIEPALAPPALN LPM RPKRP
Sbjct: 336 IGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRP 395

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           RSNM+ +SPDSSVLTREGSS++ VDPS A+ F+RVLQGQEFSTLRGNF   + ++ D AE
Sbjct: 396 RSNMVSTSPDSSVLTREGSSRVTVDPSPASAFTRVLQGQEFSTLRGNFI--DGSDPDAAE 453

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFA 519
           KSV+WPPSLDDEK+DVVS S+++G+++W+PPGR EP Y DLLSGFG + D SHG  +   
Sbjct: 454 KSVMWPPSLDDEKVDVVSTSKKHGADSWIPPGRSEPTYADLLSGFGTDMDSSHGVRAAMG 513

Query: 520 D-----AVPVRKSVLDQEGKFNLV-ARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRG 573
           D     A  +RK  ++ +GKF+ +    WS++PSG SL + +S+ K  ++ GD++YQVRG
Sbjct: 514 DSALVTANSIRKHAMEHDGKFSFLGGSSWSVLPSGLSLNLVDSSQKGHIRAGDLSYQVRG 573

Query: 574 NVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK 633
           N  + GFGD+ + + +R E  HGNWLMPP P S+F+   HS ELM K  + Q+Q+  K K
Sbjct: 574 NATFNGFGDHSISHCHRTEQPHGNWLMPP-PSSHFDYPIHSSELMSKPMLFQNQDILKPK 632

Query: 634 D--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAG---NLDQQFRAFESDQKSDHSKSSKLA 688
           D  CKLFGI L  N  +P+PV  +RN MNE      N+  Q  + ES  KS+  +  KL 
Sbjct: 633 DGNCKLFGISLVKNPAIPDPVGLNRNMMNEADVMHPNV-HQIHSSESGLKSELPRVLKL- 690

Query: 689 DDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D +   +E +K  Q           K+Q  S RSCTKV
Sbjct: 691 DKSVAISEADKLQQ---------TCKSQGTSARSCTKV 719


>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
          Length = 718

 Score =  985 bits (2547), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/697 (71%), Positives = 570/697 (81%), Gaps = 25/697 (3%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           D ++ALYTELW+ACAGPLV+VPRE ERV+YFPQGHIEQVEAST+QVADQQMPVY+LPSKI
Sbjct: 36  DADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKI 95

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           LCRVINV LKAEPDTDEVFAQ+TLLPE+NQDE+AV+KEPPPPPP RFHVHSFCKTLTASD
Sbjct: 96  LCRVINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASD 155

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSG
Sbjct: 156 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSG 215

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ GNVPSSVISSHSMHLGVLATAWH
Sbjct: 216 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWH 275

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           A+STGT+FTVYYKPRTSPSEFIVPYDQYMESIK +Y+IGMRFKMRFEGEEAPEQRFTGTI
Sbjct: 276 AISTGTLFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTI 335

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           +G EDADP+RW+DSKWRCLKVRWDETSTI RPE+VS WKIEPALAPPALN LPM RPKRP
Sbjct: 336 IGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRP 395

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           RSNM+ +SPDSSVLTREGSS++ VDPS A+ F+RVLQGQEFSTLRGNF   + ++ D AE
Sbjct: 396 RSNMVSTSPDSSVLTREGSSRVTVDPSPASAFTRVLQGQEFSTLRGNFI--DGSDPDAAE 453

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFA 519
           KSV+WPPSLDDEK+DVVS S+++G+++W+PPGR EP Y DLLSGFG + D SHG  +   
Sbjct: 454 KSVMWPPSLDDEKVDVVSTSKKHGADSWIPPGRSEPTYADLLSGFGTDMDSSHGVRAAMG 513

Query: 520 D-----AVPVRKSVLDQEGKFNLV-ARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRG 573
           D     A  +RK  ++ +GKF+ +    WS++PSG SL + +S+ K  ++ GD++YQVRG
Sbjct: 514 DSALVTANSIRKHAMEHDGKFSFLGGSSWSVLPSGLSLNLVDSSQKGHIRAGDLSYQVRG 573

Query: 574 NVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK 633
           N  + GFGD+ + + +R E  HGNWLMPP P S+F+   HS ELM K  + Q+Q+  K K
Sbjct: 574 NATFNGFGDHSISHCHRTEQPHGNWLMPP-PSSHFDYPIHSSELMSKPMLFQNQDILKPK 632

Query: 634 D--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLD---QQFRAFESDQKSDHSKSSKLA 688
           D  CKLFGI L  N  +P+PV  +RN MNE A  +     Q  + ES  KS+  +  KL 
Sbjct: 633 DGNCKLFGISLVKNPAIPDPVGLNRNMMNE-ADVMHPNVHQIHSSESGLKSELPRVLKL- 690

Query: 689 DDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
           D +   +E +K  Q           K+Q  S RSCTK
Sbjct: 691 DKSVAISEADKLQQ---------TCKSQGTSARSCTK 718


>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
          Length = 859

 Score =  969 bits (2505), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/717 (68%), Positives = 563/717 (78%), Gaps = 28/717 (3%)

Query: 24  EGQNSNSTTSGV-KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           EGQ SNST S   +R  DPE ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEAST
Sbjct: 36  EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE+NQDENA+EKE P PP
Sbjct: 96  NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHA+STGTMFTVYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIE++DP RW  SKWR LKVRWDETS+IPRP+RVS WK+EPA
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPAL+ +PMPRPKRPRSN+ PSSPDSS+LTREG++K N+DP  A+G SRVLQGQE+ST
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 455

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLS 502
           LR      ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLS
Sbjct: 456 LRTKHT--ESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLS 513

Query: 503 GFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           GFG N DPSHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES 
Sbjct: 514 GFGTNIDPSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES- 572

Query: 558 AKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH---- 613
            KVP    D + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +    
Sbjct: 573 PKVPA-ATDASLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQ 628

Query: 614 --SRELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQ 669
             +RE + K      +E  KS++  C+LFGIPL +N    +  +S RN +N+ AG    Q
Sbjct: 629 AQAREQVTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--Q 686

Query: 670 FRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             + +    SD SK SK  +D++   E  +P Q +  H KD ++KT   S+RSCTKV
Sbjct: 687 IASPKVQDLSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAQTKT--NSSRSCTKV 738


>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
 gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
           protein; Short=ARF1-BP; AltName: Full=Protein
           MEGAINTEGUMENTA
 gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
 gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
 gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
 gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 859

 Score =  969 bits (2505), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/717 (68%), Positives = 563/717 (78%), Gaps = 28/717 (3%)

Query: 24  EGQNSNSTTSGV-KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           EGQ SNST S   +R  DPE ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEAST
Sbjct: 36  EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE+NQDENA+EKE P PP
Sbjct: 96  NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHA+STGTMFTVYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIE++DP RW  SKWR LKVRWDETS+IPRP+RVS WK+EPA
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPAL+ +PMPRPKRPRSN+ PSSPDSS+LTREG++K N+DP  A+G SRVLQGQE+ST
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 455

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLS 502
           LR      ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLS
Sbjct: 456 LRTKHT--ESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLS 513

Query: 503 GFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           GFG N DPSHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES 
Sbjct: 514 GFGTNIDPSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES- 572

Query: 558 AKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH---- 613
            KVP    D + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +    
Sbjct: 573 PKVPA-ATDASLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQ 628

Query: 614 --SRELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQ 669
             +RE + K      +E  KS++  C+LFGIPL +N    +  +S RN +N+ AG    Q
Sbjct: 629 AQAREQVTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--Q 686

Query: 670 FRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             + +    SD SK SK  +D++   E  +P Q +  H KD ++KT   S+RSCTKV
Sbjct: 687 IASPKVQDLSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAQTKT--NSSRSCTKV 738


>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
          Length = 859

 Score =  968 bits (2503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/717 (68%), Positives = 562/717 (78%), Gaps = 28/717 (3%)

Query: 24  EGQNSNSTTSGV-KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           EGQ SNST S   +R  DPE ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEAST
Sbjct: 36  EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE+NQDENA+EKE P PP
Sbjct: 96  NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHA+STGTMFTVYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIE++DP RW  SKWR LKVRWDETS+IPRP+RVS WK+EPA
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPAL+ +PMPRPKRPRSN+ PSSPDSS+LTREG++K N+DP  A+G SRVLQGQE+ST
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 455

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLS 502
           LR      ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLS
Sbjct: 456 LRTKHT--ESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLS 513

Query: 503 GFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           GFG N DPSHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES 
Sbjct: 514 GFGTNIDPSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES- 572

Query: 558 AKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH---- 613
            KVP    D + Q R NV+Y    +YP LNG   E++ GNW + P   + +E   +    
Sbjct: 573 PKVPA-ATDASLQGRCNVKY---SEYPALNGLSTENAGGNWPIRPRALNYYEEVVNAQAQ 628

Query: 614 --SRELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQ 669
             +RE + K      +E  KS++  C+LFGIPL +N    +  +S RN +N+ AG    Q
Sbjct: 629 AQAREQVTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--Q 686

Query: 670 FRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             + +    SD SK SK  +D++   E  +P Q +  H KD ++KT   S+RSCTKV
Sbjct: 687 IASPKVQDLSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAQTKT--NSSRSCTKV 738


>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 853

 Score =  968 bits (2502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/717 (68%), Positives = 563/717 (78%), Gaps = 28/717 (3%)

Query: 24  EGQNSNSTTSGV-KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           EGQ SNST S   +R  DPE ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEAST
Sbjct: 36  EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE+NQDENA+EKE P PP
Sbjct: 96  NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHA+STGTMFTVYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIE++DP RW  SKWR LKVRWDETS+IPRP+RVS WK+EPA
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPAL+ +PMPRPKRPRSN+ PSSPDSS+LTREG++K N+DP  A+G SRVLQGQE+ST
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 455

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLS 502
           LR      ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLS
Sbjct: 456 LRTKHT--ESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLS 513

Query: 503 GFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           GFG N DPSHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES 
Sbjct: 514 GFGTNIDPSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES- 572

Query: 558 AKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH---- 613
            KVP    D + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +    
Sbjct: 573 PKVPA-ATDASLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQ 628

Query: 614 --SRELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQ 669
             +RE + K      +E  KS++  C+LFGIPL +N    +  +S RN +N+ AG    Q
Sbjct: 629 AQAREQVTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--Q 686

Query: 670 FRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             + +    SD SK SK  +D++   E  +P Q +  H KD ++KT   S+RSCTKV
Sbjct: 687 IASPKVQDLSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAQTKTN--SSRSCTKV 738


>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
 gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
          Length = 846

 Score =  956 bits (2470), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/734 (67%), Positives = 578/734 (78%), Gaps = 23/734 (3%)

Query: 6   SSSEVSMKSCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGE 65
           ++SEVS++  +E          +  ++SGV  V D + ALYTELW +CAGPLVTVPREGE
Sbjct: 2   AASEVSIQGYSEPSDGSRPVSETGRSSSGVGIV-DADTALYTELWRSCAGPLVTVPREGE 60

Query: 66  RVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLP 125
            VYYFPQGHIEQVEASTNQVADQQMP+Y+LPSKILCRV+NV LKAEPDTDEV+AQVTL+P
Sbjct: 61  LVYYFPQGHIEQVEASTNQVADQQMPLYNLPSKILCRVVNVLLKAEPDTDEVYAQVTLMP 120

Query: 126 ESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQ 185
           E NQDENAV+KEP  PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLP LDMSRQ
Sbjct: 121 EPNQDENAVKKEPMRPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQ 180

Query: 186 PPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL 245
           PPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL
Sbjct: 181 PPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL 240

Query: 246 RVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYD 305
           RVGVRRAMRQQGN PSSVISSHSMHLGVLATAWHA+ T TMFTVYYKPRTSP+EFIVPYD
Sbjct: 241 RVGVRRAMRQQGNAPSSVISSHSMHLGVLATAWHAIQTKTMFTVYYKPRTSPAEFIVPYD 300

Query: 306 QYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDET 365
            YMES+KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRW +SKWRCLKVRWDE 
Sbjct: 301 HYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWLESKWRCLKVRWDEN 360

Query: 366 STIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDP 425
           S+IPRP+RVS WKIEPAL+PPALN  P+ RPKRPRS++LP+SPDSSVLTREGSS+   D 
Sbjct: 361 SSIPRPDRVSPWKIEPALSPPALNVPPVARPKRPRSSILPTSPDSSVLTREGSSRATADH 420

Query: 426 SSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSE 485
           S A+GF RVLQGQE ST RG FA  E NE+D +EK ++W  S++DEK D+ SAS+RY  +
Sbjct: 421 SQASGFPRVLQGQELSTFRGGFA--EINETDLSEKPMIWQTSVNDEKNDIHSASKRYLPD 478

Query: 486 NWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVAR 540
            W+P GR E   TDLLSGFG+    SHGF  P AD     A  V++   DQE  F+L+ +
Sbjct: 479 KWLPLGRPESSLTDLLSGFGS----SHGFCLPSADQAAFGARLVKQQTQDQEKDFSLLGK 534

Query: 541 PWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLM 600
           PWSL+ SG SL + +S +K P  GGD  YQ+RG+ RY G+G++ +L G+RV +  G+W+M
Sbjct: 535 PWSLLSSGLSLNLMDSGSKAPGIGGDTPYQMRGDARYSGYGEFSVLPGHRVANQQGSWIM 594

Query: 601 P-PLPPSNFENSAHSRELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRN 657
           P P+ P   + S+HSRE+M K ++V+  EA K K+   KLFGIPL SN V  + V+  ++
Sbjct: 595 PQPVSP-YMQLSSHSREMMHKPSVVKQPEAVKPKEGNYKLFGIPLTSN-VCTDAVMMRKS 652

Query: 658 TMNEPAGNLD-----QQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVR 712
           ++ +PA +++      Q  A +SDQ+S+ SK SK+ DD    N+H+K         +D  
Sbjct: 653 SLIDPASDMNIGIHPHQSLATDSDQRSEQSKGSKV-DDGVAANDHDKQFHTFHLAARDKD 711

Query: 713 SKTQCGSTRSCTKV 726
            K    STRSCTKV
Sbjct: 712 GKGHSSSTRSCTKV 725


>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 858

 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/721 (68%), Positives = 564/721 (78%), Gaps = 32/721 (4%)

Query: 24  EGQNSNSTT-SGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           EGQ SNS+  +  +R  DPE ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEAST
Sbjct: 32  EGQKSNSSRPAAAERAVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 91

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE+NQDENA+EKE PPPP
Sbjct: 92  NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPPPP 151

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWR
Sbjct: 152 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 211

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 212 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 271

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHA+STGTMFTVYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFK
Sbjct: 272 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 331

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIED+D  RW  SKWR LKVRWDETS+IPRP+RVS WKIEPA
Sbjct: 332 MRFEGEEAPEQRFTGTIVGIEDSDITRWPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPA 391

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPAL+ +PMPRPKRPRSN+ PSSPDSS+LTREG++K N+DP  A+G SRVLQGQE+ST
Sbjct: 392 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 451

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLS 502
           LR      ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+P  RHEP YTDLLS
Sbjct: 452 LRTKHT--ESVECDAPENSVVWQSSADDDKVDVVSCSRRYGSENWMPSARHEPTYTDLLS 509

Query: 503 GFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           GFGAN +PSHG   PF D     ++P +  + D EGKF+ +A  W +M SG SLK+ ES 
Sbjct: 510 GFGANIEPSHGQRIPFYDHSSSPSMPAKNILSDPEGKFDFLANQWQMMQSGLSLKLHES- 568

Query: 558 AKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH---- 613
            KVP    D ++Q RGNV+Y    +YP+LNG   E++ GNW + P   + +E   H    
Sbjct: 569 PKVPA-ATDASFQGRGNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVHAQAQ 624

Query: 614 ------SRELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGN 665
                 +RE   K  +   +E  KS++  C+LFGIPL +N    +  +S R+ +N+ AG 
Sbjct: 625 AQAQAQAREQATKQPVTIQEETAKSREGNCRLFGIPLSNNMNGTDSAMSQRSNLNDAAGL 684

Query: 666 LDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
              Q  + +     D SK SK  +D++   E  +P Q +  H KD  +K+   S+RSCTK
Sbjct: 685 T--QLASPKVQDLPDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAHTKSN--SSRSCTK 737

Query: 726 V 726
           V
Sbjct: 738 V 738


>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
          Length = 854

 Score =  939 bits (2426), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/715 (69%), Positives = 558/715 (78%), Gaps = 29/715 (4%)

Query: 24  EGQNSNSTTSGV-KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           EGQ SNS  S V +R  DPE ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEAST
Sbjct: 36  EGQKSNSNRSVVAERAVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE NQDEN +EKE PPPP
Sbjct: 96  NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEPNQDENVIEKETPPPP 155

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHA+STGTMFTVYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIED+DP RW  SKWR LKVRWDETS+IPRP+RVS WKIEPA
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPA 395

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPAL+ +PMPRPKRPRSN+ PSSPDSS+L REGS+K N+DP  A+G SRVLQGQE+ST
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLQREGSTKANMDPLPASGLSRVLQGQEYST 455

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPV-YTDLL 501
           LR      ES E D  E SVVW  S DD+K+DVVSASRR   ENW+  GRHEP  +TDLL
Sbjct: 456 LRTKHT--ESVECDVPENSVVWQSSADDDKVDVVSASRR--CENWMSSGRHEPAPFTDLL 511

Query: 502 SGFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPES 556
           SGFGAN +PS G   PF D     +VP +K + D +GKF+  A  W +M SG SLK+ ES
Sbjct: 512 SGFGANINPSFGQRIPFYDHSSSPSVPAKKILSDHDGKFDFFANQWQMMHSGLSLKLHES 571

Query: 557 -NAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHS- 614
                P    D ++Q RGNV+Y   G+YP+L+    E++ GNW + P   + FE+  HS 
Sbjct: 572 PKVSAP---SDASFQGRGNVKY---GEYPVLHDLTTENTGGNWPIRPRALNYFEDVVHSQ 625

Query: 615 -RELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFR 671
            RE + K   V  +E  K++D  C+LFGIPL +N    +  ++ RN + + AG L Q   
Sbjct: 626 AREHVAKRPAVVQEETTKARDGNCRLFGIPLVNNMNGADSTMAQRNNLKDAAG-LTQTAP 684

Query: 672 AFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
               D  SD SK SK  +D +   E  +P Q +  H KD  +KT   S+RSCTKV
Sbjct: 685 PKVQDL-SDQSKGSKSTNDQR---EQGRPFQTNHPHPKDAHTKT--NSSRSCTKV 733


>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
 gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
          Length = 678

 Score =  920 bits (2377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/629 (72%), Positives = 514/629 (81%), Gaps = 21/629 (3%)

Query: 24  EGQNSNSTTSGV-KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           EGQ SNST S   +R  DPE ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEAST
Sbjct: 36  EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAST 95

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE+NQDENA+EKE P PP
Sbjct: 96  NQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWR
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISSHSMHLGVLATAWHA+STGTMFTVYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFK
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFK 335

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEGEEAPEQRFTGTIVGIE++DP RW  SKWR LKVRWDETS+IPRP+RVS WK+EPA
Sbjct: 336 MRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFST 442
           LAPPAL+ +PMPRPKRPRSN+ PSSPDSS+LTREG++K N+DP  A+G SRVLQGQE+ST
Sbjct: 396 LAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYST 455

Query: 443 LRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLS 502
           LR      ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLS
Sbjct: 456 LRTKHT--ESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLS 513

Query: 503 GFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESN 557
           GFG N DPSHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES 
Sbjct: 514 GFGTNIDPSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES- 572

Query: 558 AKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH---- 613
            KVP    D + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +    
Sbjct: 573 PKVPA-ATDASLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQ 628

Query: 614 --SRELMPKSAMVQDQEAGKSKD--CKLF 638
             +RE + K      +E  KS++  C+L+
Sbjct: 629 AQAREQVTKQPFTIQEETAKSREGNCRLW 657


>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
          Length = 851

 Score =  918 bits (2372), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/704 (68%), Positives = 546/704 (77%), Gaps = 27/704 (3%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
             +RV DP+ ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEASTNQ A+QQMP+Y
Sbjct: 43  AAERVVDPDAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY 102

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCK 153
           DLPSKILCRVINV LKAE DTDEV+AQ+TLLPE  QDENA+EKE PPPPPPRF VHSFCK
Sbjct: 103 DLPSKILCRVINVDLKAEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCK 162

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH +EWRFRHIFRGQPRR
Sbjct: 163 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRR 222

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV
Sbjct: 223 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 282

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           LATAWHA+STGTMFTVYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFKMRFEGEEAPEQ
Sbjct: 283 LATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQ 342

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGIED+DP RW  SKWR LKVRWDET++IPRP+RVS WKIEPAL+PPAL+ +PM
Sbjct: 343 RFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPVPM 402

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESN 453
           PRPKRPRSN+ PS+PDSS+  REGSSK N+DP  A+G SRVLQGQE+ TLR      ES 
Sbjct: 403 PRPKRPRSNLAPSTPDSSMRIREGSSKANMDPLPASGLSRVLQGQEYPTLRTKHV--ESG 460

Query: 454 ESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHG 513
           E D  E SVVW  S DD+K+DVVSASRRY  ENW+  GRH P  TDLLSGFG N +P HG
Sbjct: 461 ECDAPENSVVWQSSADDDKVDVVSASRRY--ENWISSGRHGPTCTDLLSGFGTNIEPPHG 518

Query: 514 FSSPFAD-------AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGD 566
              PF D       +V  RK + DQ+GKF  +A  W +M SG SLK+ ES  KVP    D
Sbjct: 519 HQIPFYDRLSSSSPSVAARKILSDQDGKFEYLANQWQMMHSGLSLKLHES-PKVPA-ASD 576

Query: 567 VNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH--SRELMPKSAMV 624
            ++Q  GN  Y   G+Y +      E++ GNW + P   + FE + H  +RE + K   V
Sbjct: 577 ASFQGIGNPNY---GEYALPRAVTTENAAGNWPIRPRALNYFEEAVHAQTREHVTKRPAV 633

Query: 625 QDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHS 682
            ++EA K +D  C+LFGIPL +N    +  +S RN +N+  G    Q  + +    SD S
Sbjct: 634 VEEEAAKPRDGNCRLFGIPLVNNVNGTDTTLSQRNNLNDCTG--PTQIASPKVQDLSDQS 691

Query: 683 KSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           K SK  +D++   E  +P   ++ H KDV++KT   S RSCTKV
Sbjct: 692 KGSKSTNDHR---EQGRPFPVNKPHPKDVQTKTN--SCRSCTKV 730


>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
          Length = 848

 Score =  915 bits (2366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/743 (65%), Positives = 559/743 (75%), Gaps = 39/743 (5%)

Query: 6   SSSEVSMKSCNETGR-----------IPMEGQNSNSTTS-GVKRVGDPEMALYTELWHAC 53
           +SSEVSMK     G            +  E Q + S  S   +RV DPE ALY ELWHAC
Sbjct: 2   ASSEVSMKGNRGRGENFSSAGYSDPTVAGEAQKTQSNRSVAAERVVDPEAALYRELWHAC 61

Query: 54  AGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPD 113
           AGPLVTVPR+ +RV+YFPQGHIEQVEASTNQ A+QQMP+YDLPSKILCRVINV LKAE D
Sbjct: 62  AGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVINVDLKAEAD 121

Query: 114 TDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHA 173
           TDEV+AQ+TLLPE  QDEN++EKE PPPPPPRF VHSFCKTLTASDTSTHGGFSVLRRHA
Sbjct: 122 TDEVYAQITLLPEPVQDENSIEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHA 181

Query: 174 DECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGD 233
           DECLPPLDMSRQPPTQEL AKDLH +EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGD
Sbjct: 182 DECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGD 241

Query: 234 AFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKP 293
           AFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA+STGTMFTVYYKP
Sbjct: 242 AFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKP 301

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDS 353
           RTSPSEFIVP+DQY ES+K NYSIGMRFKMRFEGEEAPEQRFTGTIVGIED+DP RW  S
Sbjct: 302 RTSPSEFIVPFDQYTESVKINYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKS 361

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           KWR LKVRWDET++IPRP+RVS WKIEPAL+PPAL+ +PMPRPKRPRSN+  S+PDSS+ 
Sbjct: 362 KWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPVPMPRPKRPRSNLASSTPDSSMR 421

Query: 414 TREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKI 473
            REGSSK N+DP  A+G SRVLQGQE+ TLR      ES E D  E SVVW  S DD+K+
Sbjct: 422 IREGSSKANMDPLPASGLSRVLQGQEYPTLRTKHV--ESVECDAPENSVVWQSSTDDDKV 479

Query: 474 DVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD------AVPVRKS 527
           DV+SASRRY  ENW+  GRH P  TDLLSGFG N +P HG   PF D      +V  RK 
Sbjct: 480 DVISASRRY--ENWISSGRHGPTCTDLLSGFGTNIEPPHGHQIPFYDRLSSPPSVAARKI 537

Query: 528 VLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLN 587
           + DQ+GKF  +A  W +M SG SLK+ ES  KVP    D ++Q  GN  Y   G+Y +  
Sbjct: 538 LSDQDGKFEYLANQW-MMHSGLSLKLHES-PKVPA-ASDASFQGIGNPNY---GEYALPR 591

Query: 588 GNRVEHSHGNWLMPPLPPSNFENSAH--SRELMPKSAMVQDQEAGKSKD--CKLFGIPLF 643
               E++ GNW + P   + FE + H  +RE + K   V  +EA K +D  C+LFGIPL 
Sbjct: 592 AVTTENAAGNWPIRPRALNYFEEAVHAQAREHVTKRPAVVQEEAAKPRDGNCRLFGIPLV 651

Query: 644 SNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQP 703
           +N    +  +S RN +N+PAG    Q  + +    SD SK SK  +D++   E  +P   
Sbjct: 652 NNVNGTDTTLSQRNNLNDPAG--PTQMASPKVQDLSDQSKGSKSTNDHR---EQGRPFPV 706

Query: 704 SQTHTKDVRSKTQCGSTRSCTKV 726
           S+ H KDV++KT   S RSCTKV
Sbjct: 707 SKPHPKDVQTKT--NSCRSCTKV 727


>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 733

 Score =  909 bits (2349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/642 (72%), Positives = 513/642 (79%), Gaps = 32/642 (4%)

Query: 90  MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH 149
           MPVYDL  KILCRVINV LKAEPDTDEVFAQVTL+PE NQDENAVEKE PP PPPRFHVH
Sbjct: 1   MPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVH 60

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+QPPTQEL AKDLHGNEWRFRHIFRG
Sbjct: 61  SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRG 120

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM
Sbjct: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 180

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
           HLGVLATAWHAV TGTMFTVYYKPRTSP+EFIVPYDQYMES+KNNY+IGMRFKMRFEGEE
Sbjct: 181 HLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEE 240

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           APEQRFTGTIVGIED+D +RW  SKWRCLKVRWDETS IPRPERVS WKIEPALAPPALN
Sbjct: 241 APEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALN 300

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAE 449
            LPMPRPKRPR+N++PSSPDSSVLTRE SSK+++DP   +GF RVLQGQE STLRGN A 
Sbjct: 301 PLPMPRPKRPRANVVPSSPDSSVLTREASSKVSMDPLPTSGFQRVLQGQESSTLRGNLA- 359

Query: 450 RESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD 509
            ESN+S TAEKSV W P+ D+EK+D VS SRRYGSENW+P  R EP Y+DLLSGFG+   
Sbjct: 360 -ESNDSYTAEKSVAWTPATDEEKMDAVSTSRRYGSENWMPMSRQEPTYSDLLSGFGST-- 416

Query: 510 PSHGFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGD-VN 568
                                +EGK N++ + W +MP G SL    SN K   QG D   
Sbjct: 417 ---------------------REGKHNMLTQ-WPVMPPGLSLNFLHSNMKGSAQGSDNAT 454

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQE 628
           YQ +GN+RY  FGDY +L+G++VE+ HGN+LMPP PP+ +E S HSREL  K    +  E
Sbjct: 455 YQAQGNMRYSAFGDYSVLHGHKVENPHGNFLMPPPPPTQYE-SPHSRELSQKQMSAKISE 513

Query: 629 AGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLD--QQFRAFESDQKSDHSKS 684
           A K K  DCKLFG  L S+  M EP +S RN  +E + ++    Q   FE+DQKS+HSKS
Sbjct: 514 AAKPKDSDCKLFGFSLLSSPTMLEPSLSQRNATSETSSHMQISSQHHTFENDQKSEHSKS 573

Query: 685 SKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           SK AD   + +EHEK  Q SQ H KDV+ K Q GS RSCTKV
Sbjct: 574 SKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQSGSARSCTKV 615


>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
          Length = 888

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/719 (67%), Positives = 548/719 (76%), Gaps = 37/719 (5%)

Query: 24  EGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN 83
           EGQ  +S+     RV D E ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEASTN
Sbjct: 70  EGQKGHSS-----RVVDAEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTN 124

Query: 84  QVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP 143
           Q A+QQMP+YDLPSKILCRVINV LKAE D+DEV+AQ+TLLPE+ QDENA+EKE PPPPP
Sbjct: 125 QAAEQQMPLYDLPSKILCRVINVDLKAEVDSDEVYAQITLLPEAIQDENAIEKEAPPPPP 184

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
           PRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWRF
Sbjct: 185 PRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRF 244

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
           RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNV SSV
Sbjct: 245 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVSSSV 304

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKM 323
           ISSHSMHLGVLATAWHA+STGTMF+VYYKPRTSPSEFIVP+DQYMES+KNNYSIGMRFKM
Sbjct: 305 ISSHSMHLGVLATAWHAISTGTMFSVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKM 364

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
           RFEGEEAPEQRFTGTIVGIED+DP RW  SKWR LKVRWDETS+IPRP+RVS WK+EPAL
Sbjct: 365 RFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKLEPAL 424

Query: 384 APPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTL 443
           APPAL+ +PMPRPKRPRSN+ PSSPDSSVL REGS+  N DP  A+G SRVLQGQE  TL
Sbjct: 425 APPALSPVPMPRPKRPRSNIAPSSPDSSVLIREGSAMGNKDPLPASGLSRVLQGQEHPTL 484

Query: 444 RGNFAERESNESDTAEKSVVWPPSLDDEKIDVV--SASRRYGSENWVPPGRHEPVYTDLL 501
           R      E+ E D  E SVVW  S DD+K+DVV  SASRRY  ENW+  GRHE  YTDLL
Sbjct: 485 RTKHT--ETVECDAPESSVVWQSSADDDKVDVVSASASRRY--ENWMSSGRHESAYTDLL 540

Query: 502 SGFGANADPSHGFSSPFADA-----VPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPES 556
           SGFGAN DPS G   PF D      V   K + D++GKF+  A  W +M SG SL + ES
Sbjct: 541 SGFGANIDPSPGHQIPFYDHSSLPFVAANKFIGDRDGKFDYFANQWQMMHSGLSLTLHES 600

Query: 557 NAKVPVQGGDVNYQ-VRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFEN----- 610
             K+P    D ++Q  RGN +Y   G+YP L+    E++ GNW + P   + FE      
Sbjct: 601 -PKIPA-ASDTSFQGGRGNAKY---GEYPGLHSLTTENAGGNWPIRPRAVNYFEEAVQAH 655

Query: 611 -SAHSRELMPKS-AMVQDQEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQ 668
             A +RE + K   MV+D    +  +C+LFGIPL +N  + E  +S RN  N+ AG    
Sbjct: 656 AQAQAREHVTKRPEMVEDTAKSRDGNCRLFGIPLVNNVNVTESTMSPRNNFNDTAGL--T 713

Query: 669 QFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQT-HTKDVRSKTQCGSTRSCTKV 726
           Q  + +    SD SK SK  +D +   E  +P Q +   H KDV +KT   S+RSCTKV
Sbjct: 714 QMTSPKVQDLSDQSKGSKSTNDQR---EQGRPFQANHHPHPKDVHTKTH--SSRSCTKV 767


>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
          Length = 769

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/691 (62%), Positives = 487/691 (70%), Gaps = 56/691 (8%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           D E ALY ELWHACAGPLVTVPR GERV+YFPQGH+EQVEASTNQVADQQMP YDL +KI
Sbjct: 5   DSEDALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKI 64

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           LCRVINV LKAE DTDEVFAQVTLLPE  QDEN+ EKE    P PR  VHSFCKTLTASD
Sbjct: 65  LCRVINVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASD 124

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMS+QPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSG
Sbjct: 125 TSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSG 184

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WS+FVSSK+LVAGDAFIFLRGENGELRVGVRRAMRQ  N PSSVISSHSMHLGVLATAWH
Sbjct: 185 WSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWH 244

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AVSTGT+FTVYYKPRTSP+EFI+P+DQYME++KN+YSIGMRFKM+FEGEEAPEQRFTGT+
Sbjct: 245 AVSTGTIFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTV 304

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           +G EDADP RW  SKWRCLKVRWDETS++PRPE VS W IE AL PP+LN LP+ R KRP
Sbjct: 305 IGTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLNPLPVSRSKRP 364

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           R+NM+ SS +SSVLTREG SK+ +D S  +GFSR LQGQE STLRG F E  +N+  T +
Sbjct: 365 RANMMSSSTESSVLTREGLSKVTIDHSPGSGFSRALQGQEISTLRGIFME-NNNDLVTTQ 423

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFA 519
           KS+V P S   +++D  S  R + SE+WVP  R      +L+SG                
Sbjct: 424 KSIVQPRSQVVDQMDSASTKRSFMSEDWVPQLRQGVQCANLISG---------------- 467

Query: 520 DAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGG 579
                                P S+M S   L M ESN K+        Y    NVRY G
Sbjct: 468 ---------------------PQSMMHSSTVLNM-ESNVKLSEGAKGKPYPTPANVRYSG 505

Query: 580 FGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK---DCK 636
           F  Y  L+    E   GNWL+P LP S  E + H   L P+   VQ +E  KSK   +CK
Sbjct: 506 FSGYGGLHDLGAEQCPGNWLLPLLPHSYSETTPHLMGLKPQPLYVQ-EEVVKSKGDGNCK 564

Query: 637 LFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNE 696
           LFGI L S     +P     N M+ P G +  Q       +  + SKSSK  +      E
Sbjct: 565 LFGISLIS-----KPAA---NPMHRPQGEI--QLTMENPARHPEQSKSSKYMEIGGF--E 612

Query: 697 HEKPSQP-SQTHTKDVRSKTQCGSTRSCTKV 726
           HEKP Q   Q  ++D +SK   GSTRSC KV
Sbjct: 613 HEKPFQALEQQLSRDDQSKLHSGSTRSCIKV 643


>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/691 (62%), Positives = 487/691 (70%), Gaps = 56/691 (8%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           D E ALY ELWHACAGPLVTVPR GERV+YFPQGH+EQVEASTNQVADQQMP YDL +KI
Sbjct: 5   DSEDALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKI 64

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           LCRVINV LKAE DTDEVFAQVTLLPE  QDEN+ EKE    P PR  VHSFCKTLTASD
Sbjct: 65  LCRVINVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASD 124

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMS+QPPTQEL AKDLHGNEWRFRHIFRGQPRRHLLQSG
Sbjct: 125 TSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSG 184

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WS+FVSSK+LVAGDAFIFLRGENGELRVGVRRAMRQ  N PSSVISSHSMHLGVLATAWH
Sbjct: 185 WSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWH 244

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AVSTGT+FTVYYKPRTSP+EFI+P+DQYME++KN+YSIGMRFKM+FEGEEAPEQRFTGT+
Sbjct: 245 AVSTGTIFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTV 304

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           +G EDADP RW  SKWRCLKVRWDETS++PRPE VS W IE AL PP+LN LP+ R KRP
Sbjct: 305 IGTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLNPLPVSRSKRP 364

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           R+NM+ SS +SSVLTREG SK+ +D S  +GFSR LQGQE STLRG F E  +N+  T +
Sbjct: 365 RANMMSSSTESSVLTREGLSKVTIDHSPGSGFSRALQGQEISTLRGIFME-NNNDLVTTQ 423

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFA 519
           KS+V P S   +++D  S  R + SE+WVP  R      +L+SG                
Sbjct: 424 KSIVQPRSQVVDQMDSASTKRSFMSEDWVPQLRQGVQCANLISG---------------- 467

Query: 520 DAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGG 579
                                P S+M S   L M ESN K+        Y    NVRY G
Sbjct: 468 ---------------------PQSMMHSSTVLNM-ESNVKLSEGAKGKPYPTPANVRYSG 505

Query: 580 FGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK---DCK 636
           F  Y  L+    E   GNWL+P LP S  E + H   L P+   VQ+ E  KSK   +CK
Sbjct: 506 FSGYGGLHDLGAEQCPGNWLLPLLPHSYSETTPHLMGLKPQPLYVQE-EVVKSKGDGNCK 564

Query: 637 LFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNE 696
           LFGI L S     +P     N M+ P G +  Q       +  + SKSSK  +      E
Sbjct: 565 LFGISLIS-----KPAA---NPMHRPQGEI--QLTMENPARHPEQSKSSKYMEIGGF--E 612

Query: 697 HEKPSQP-SQTHTKDVRSKTQCGSTRSCTKV 726
           HEKP Q   Q  ++D +SK   GSTRSC KV
Sbjct: 613 HEKPFQALEQQLSRDDQSKLHSGSTRSCIKV 643


>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
          Length = 782

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/744 (58%), Positives = 508/744 (68%), Gaps = 51/744 (6%)

Query: 7   SSEVSMKSCNETGRIPMEGQNSNSTTS-----GVKR-------------VGDPEMALYTE 48
           SSEVS+K      R    G++ +S  S     G+ R               + E  LY E
Sbjct: 3   SSEVSIKGSGSNAR----GESFSSACSDPNNGGIARNTAAEFPESYAGFASNEEDFLYNE 58

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           LWHACAGPLVTVPR GE+V+YFPQGHIEQVEASTNQV+DQQMP+Y LPSKILC VIN+ L
Sbjct: 59  LWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTNQVSDQQMPIYKLPSKILCTVINIDL 118

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSV 168
           KAEPDTDEVFAQ+TL+PES QDE  +  E PPP   R HVHSFCKTLTASDTSTHGGFSV
Sbjct: 119 KAEPDTDEVFAQMTLVPESTQDEKDIIIETPPPLQSRPHVHSFCKTLTASDTSTHGGFSV 178

Query: 169 LRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 228
           LRRHADECLPPLDM RQPP+QEL AKDLHG EW FRHIFRGQPRRHLLQSGWSVFVSSKR
Sbjct: 179 LRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPRRHLLQSGWSVFVSSKR 238

Query: 229 LVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFT 288
           LVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATA HA+ TGTMFT
Sbjct: 239 LVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATASHAIQTGTMFT 298

Query: 289 VYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQ 348
           VYYKPRTSPSEFIVP+ QY+ESIK NYSIGMRFKMRFEGEEAPEQRFTGTI+GI D D  
Sbjct: 299 VYYKPRTSPSEFIVPFAQYVESIKKNYSIGMRFKMRFEGEEAPEQRFTGTIIGIGDVDST 358

Query: 349 RWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSP 408
           RW +SKWRCLKVRWDE +++PRP+++S W+IEPALAP ALN LP+ R KRPR N+LP+SP
Sbjct: 359 RWPESKWRCLKVRWDEQTSVPRPDKISPWQIEPALAPIALNPLPVSRTKRPRPNILPTSP 418

Query: 409 DSSVLTREGSSKLNVDPSSAT-GFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPS 467
           D S LTR    K+ VD ++   GFSRVLQGQE +TLRG FA  E +ES+ A+K V     
Sbjct: 419 DVSALTRV-PPKVAVDAAAQDHGFSRVLQGQEITTLRGAFA--ECSESENAQKPVGQSHL 475

Query: 468 LDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----AV 522
            D E++D  S+ R+  SE W+P  R E       SG     D ++GFS  F D     A 
Sbjct: 476 HDKERVD-ASSLRKMASECWMPLVRPE----HSCSGLHGPTDDAYGFSLSFPDQSHEEAN 530

Query: 523 PVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGD 582
           PV   +  Q G        WS+M S PSL M +S++++ ++   + Y+  G+        
Sbjct: 531 PVGSQLQMQSGS-------WSMMTS-PSL-MRDSSSRMSIE---LPYKKPGDFISNPPTG 578

Query: 583 YPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSKDCKLFGIPL 642
           YPM     V     NWL+   P  + + SA  R      A  +  ++  S +CKLFGI L
Sbjct: 579 YPMRTSTPVPQQPTNWLISSTP--SLKESASGRVHTDHYAQPEPVKSKGSGNCKLFGISL 636

Query: 643 FSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQ 702
            S+    E   SH    +E A    +  +A ESD+ S+  K +K  D     ++  K +Q
Sbjct: 637 KSSSQQHETSSSHAKVADEAAQTFCKP-QALESDRLSEPLKCAKSLDTLCSDSDEVKTNQ 695

Query: 703 PSQTHTKDVRSKTQCGSTRSCTKV 726
           P Q H++D  +K  C STRSCTKV
Sbjct: 696 PVQQHSRDAHNKPLCSSTRSCTKV 719


>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
          Length = 798

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/735 (57%), Positives = 490/735 (66%), Gaps = 97/735 (13%)

Query: 9   EVSMKSCNETGR--------IPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTV 60
           EVS+K  +  GR        +  EGQ SN     + RV D E A+Y ELWHACAGPLVTV
Sbjct: 2   EVSVKGNHGGGRGRENAVSVVAGEGQKSN-----LNRVVDEEAAIYRELWHACAGPLVTV 56

Query: 61  PREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQ 120
           PR  +RV+YFPQGHIEQVEASTNQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ
Sbjct: 57  PRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEVDTDEVYAQ 116

Query: 121 VTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 180
           +TLLPE NQDENAVEKE PPPPPPRF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL
Sbjct: 117 ITLLPEPNQDENAVEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 176

Query: 181 DMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
           DMSRQPPTQEL AKDLH NEWRFRHIFRGQP                             
Sbjct: 177 DMSRQPPTQELVAKDLHSNEWRFRHIFRGQP----------------------------- 207

Query: 241 ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEF 300
                    RR + Q G   S  +SS  +  G                 +   RTSPSEF
Sbjct: 208 ---------RRHLLQSG--WSVFVSSKRLVAG---------------DAFIFLRTSPSEF 241

Query: 301 IVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKV 360
           IVP+DQYMES+KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED+DP RW  SKWR LKV
Sbjct: 242 IVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKV 301

Query: 361 RWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSK 420
           RWDETS+IPRPERVS WKIEPALAPPAL+ +PM RPKRPRSNM PSSPDSS+  +EGSSK
Sbjct: 302 RWDETSSIPRPERVSPWKIEPALAPPALSPVPMTRPKRPRSNMAPSSPDSSMHIKEGSSK 361

Query: 421 LNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASR 480
           +NV P  A+G SRVLQGQE+ TLR      ES E D  E SVVW  S DD+K+DV  ASR
Sbjct: 362 VNVYPLPASGLSRVLQGQEYPTLRTKHT--ESVECDAPESSVVWQSSADDDKVDV--ASR 417

Query: 481 RYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKF 535
           RY  ENW+  GRHE  YTDLLSGFGAN DPS G   PF D     +V  +K + DQ+ KF
Sbjct: 418 RY--ENWMSSGRHE--YTDLLSGFGANVDPSQGHQIPFHDHSSSPSVTAKKILSDQDAKF 473

Query: 536 NLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSH 595
           + +A  W +M SG SLK+ ES  ++P    D ++Q RGN  Y   G+YP+L+    E + 
Sbjct: 474 DYLANQWQMMNSGLSLKLHES-PQIP-SASDASFQGRGNATY---GEYPVLHSLTTETAG 528

Query: 596 GNWLMPPLPPSNFENSAH--SRELMPKSAMVQDQEAGKSKD--CKLFGIPLFSNHVMPEP 651
           GNW + P   + FE + H  +RE + +   +  +E  KS+D  C+LFGIPL +N    + 
Sbjct: 529 GNWPIRPRALNYFEEAVHAQAREHVTERPQMVQEETAKSRDGNCRLFGIPLVNNVNETDS 588

Query: 652 VVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDV 711
            +S RN +NE +G    Q  + +    SDHSK SK  +D++   E  +PSQ  Q H KD 
Sbjct: 589 TMSQRNNLNENSGFT--QMASPKVQDLSDHSKGSKSTNDHR---EQGRPSQAKQPHAKDS 643

Query: 712 RSKTQCGSTRSCTKV 726
             KT   S RSCTKV
Sbjct: 644 HCKT--NSNRSCTKV 656


>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
 gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
 gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
          Length = 808

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/703 (55%), Positives = 483/703 (68%), Gaps = 36/703 (5%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
            GDP   LY ELWHACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVAD QM +YDLPS
Sbjct: 17  TGDP---LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPS 73

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP--PRFHVHSFCKTL 155
           K+LCRV+NV+LKAE DTDEV+AQV L+PE  Q+E AVEK  P   P   R  V SFCKTL
Sbjct: 74  KLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTL 133

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLH  +WRFRHIFRGQPRRHL
Sbjct: 134 TASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHL 193

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLA
Sbjct: 194 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLA 253

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
           TAWHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYS+GMRF+MRFEGEEAPEQRF
Sbjct: 254 TAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRF 313

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
           TGTI+G E+ DP  W +S WR LKVRWDE STIPRP+RVS WKIEPA +PP +N LP+ R
Sbjct: 314 TGTIIGSENLDP-VWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPP-VNPLPLSR 371

Query: 396 PKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSA--TGFSRVLQGQEFSTLRGNFAERESN 453
            KRPR N  P+SP+S +LT+E ++K++ DP+ A  +  S VLQGQE  TLR N    ESN
Sbjct: 372 VKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSNLT--ESN 429

Query: 454 ESD-TAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSH 512
           +SD TA K ++W PS +  K   ++  +R   +NW+  GR E  + D+ SG  +  D S 
Sbjct: 430 DSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQLGRRETDFKDVRSGSQSFGD-SP 488

Query: 513 GFSSPFADAVPVR----KSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVN 568
           GF     D  P R    K+    +G     + P+  +   PSL + ES+ ++     +++
Sbjct: 489 GFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTV-ESSTQMHTDSKELH 547

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV-QDQ 627
           +    +  YG   D P     R E +  +WL       +F      R + P +++   + 
Sbjct: 548 FWNGQSTVYGNSRDRP--QNFRFEQNSSSWLN-----QSFARPEQPRVIRPHASIAPVEL 600

Query: 628 EAGKSKDCKLFGIPLFS----NHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSK 683
           E  +    K+FG  + +    N+ +  P+ +    M +   +L+ Q +  ++D   + S 
Sbjct: 601 EKTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLN-QLQPVQTDCIPEVSV 659

Query: 684 SSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           S+          E+EK  Q +Q  +KDV+SKTQ  STRSCTKV
Sbjct: 660 STA-----GTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKV 697


>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
          Length = 791

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/702 (55%), Positives = 483/702 (68%), Gaps = 36/702 (5%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELWHACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVAD QM +YDLPSK
Sbjct: 1   GDP---LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSK 57

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP--PRFHVHSFCKTLT 156
           +LCRV+NV+LKAE DTDEV+AQV L+PE  Q+E AVEK  P   P   R  V SFCKTLT
Sbjct: 58  LLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLH  +WRFRHIFRGQPRRHLL
Sbjct: 118 ASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
           QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLAT
Sbjct: 178 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLAT 237

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           AWHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYS+GMRF+MRFEGEEAPEQRFT
Sbjct: 238 AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFT 297

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTI+G E+ DP  W +S WR LKVRWDE STIPRP+RVS WKIEPA +PP +N LP+ R 
Sbjct: 298 GTIIGSENLDP-VWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPP-VNPLPLSRV 355

Query: 397 KRPRSNMLPSSPDSSVLTREGSSKLNVDPSSA--TGFSRVLQGQEFSTLRGNFAERESNE 454
           KRPR N  P+SP+S +LT+E ++K++ DP+ A  +  S VLQGQE  TLR N    ESN+
Sbjct: 356 KRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSNLT--ESND 413

Query: 455 SD-TAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHG 513
           SD TA K ++W PS +  K   ++  +R   +NW+  GR E  + D+ SG  +  D S G
Sbjct: 414 SDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQLGRRETDFKDVRSGSQSFGD-SPG 472

Query: 514 FSSPFADAVPVR----KSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNY 569
           F     D  P R    K+    +G     + P+  +   PSL + ES+ ++     ++++
Sbjct: 473 FFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTV-ESSTQMHTDSKELHF 531

Query: 570 QVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV-QDQE 628
               +  YG   D P     R E +  +WL       +F      R + P +++   + E
Sbjct: 532 WNGQSTVYGNSRDRP--QNFRFEQNSSSWLN-----QSFARPEQPRVIRPHASIAPVELE 584

Query: 629 AGKSKDCKLFGIPLFS----NHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKS 684
             +    K+FG  + +    N+ +  P+ +    M +   +L+ Q +  ++D   + S S
Sbjct: 585 KTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLN-QLQPVQTDCIPEVSVS 643

Query: 685 SKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           +          E+EK  Q +Q  +KDV+SKTQ  STRSCTKV
Sbjct: 644 TA-----GTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKV 680


>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
          Length = 803

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/703 (55%), Positives = 483/703 (68%), Gaps = 36/703 (5%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
            GDP   LY ELWHACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVAD QM +YDLPS
Sbjct: 12  TGDP---LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPS 68

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP--PRFHVHSFCKTL 155
           K+LCRV+NV+LKAE DTDEV+AQV L+PE  Q+E AVEK  P   P   R  V SFCKTL
Sbjct: 69  KLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTL 128

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLH  +WRFRHIFRGQPRRHL
Sbjct: 129 TASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHL 188

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLA
Sbjct: 189 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLA 248

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
           TAWHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYS+GMRF+MRFEGEEAPEQRF
Sbjct: 249 TAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRF 308

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
           TGTI+G E+ DP  W +S WR LKVRWDE STIPRP+RVS WKIEPA +PP +N LP+ R
Sbjct: 309 TGTIIGSENLDP-VWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPP-VNPLPLSR 366

Query: 396 PKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSA--TGFSRVLQGQEFSTLRGNFAERESN 453
            KRPR N  P+SP+S +LT+E ++K++ DP+ A  +  S VLQGQE  TLR N    ESN
Sbjct: 367 VKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSNLT--ESN 424

Query: 454 ESD-TAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSH 512
           +SD TA K ++W PS +  K   ++  +R   +NW+  GR E  + D+ SG  +  D S 
Sbjct: 425 DSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQLGRRETDFKDVRSGSQSFGD-SP 483

Query: 513 GFSSPFADAVPVR----KSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVN 568
           GF     D  P R    K+    +G     + P+  +   PSL + ES+ ++     +++
Sbjct: 484 GFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTV-ESSTQMHTDSKELH 542

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV-QDQ 627
           +    +  YG   D P     R E +  +WL       +F      R + P +++   + 
Sbjct: 543 FWNGQSTVYGNSRDRP--QNFRFEQNSSSWLN-----QSFARPEQPRVIRPHASIAPVEL 595

Query: 628 EAGKSKDCKLFGIPLFS----NHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSK 683
           E  +    K+FG  + +    N+ +  P+ +    M +   +L+ Q +  ++D   + S 
Sbjct: 596 EKTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLN-QLQPVQTDCIPEVSV 654

Query: 684 SSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           S+          E+EK  Q +Q  +KDV+SKTQ  STRSCTKV
Sbjct: 655 STA-----GTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKV 692


>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
          Length = 814

 Score =  692 bits (1786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/706 (55%), Positives = 483/706 (68%), Gaps = 39/706 (5%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
            GDP   L+ ELWHACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVAD QM +YDLPS
Sbjct: 15  AGDP---LFNELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLYDLPS 71

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP--PRFHVHSFCKTL 155
           K+LC VINV+LKAE DTDEV+AQV L+PE++Q+E AVEK          +  V SFCKTL
Sbjct: 72  KLLCSVINVELKAEADTDEVYAQVMLIPENDQNEMAVEKSSSKAATTLAKPAVRSFCKTL 131

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLHG +WRFRHIFRGQPRRHL
Sbjct: 132 TASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHL 191

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           LQSGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMRQ  NVPSSVISSHSMHLGVLA
Sbjct: 192 LQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLA 251

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
           TAWHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIG+RF+MRFEGEEAPEQRF
Sbjct: 252 TAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGVRFRMRFEGEEAPEQRF 311

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
           TGTI+G E+ DP  W +S WR LKVRWDE STIPRP+RVS WKIEPA +PP +N LP+ R
Sbjct: 312 TGTIIGSENLDP-LWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPP-VNPLPLSR 369

Query: 396 PKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSA--TGFSRVLQGQEFSTLRGNFAERESN 453
            KRPR N+ P+SP+SS LT+EG++K++VD + A     S VLQGQE  TLR N    +SN
Sbjct: 370 VKRPRPNVPPASPESSALTKEGATKVDVDSAQAQRNQTSMVLQGQEPMTLRSNNLT-DSN 428

Query: 454 ESD-TAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSH 512
           +SD T +K ++W PS +  K   ++  +R   +NW+  GR E  Y D  SG  +  D S 
Sbjct: 429 DSDATVQKPMMWSPSPNIGKSRPLTFQQRPSMDNWMQLGRRETDYKDASSGAQSFGD-SP 487

Query: 513 GFSSPFADAVPVR----KSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVN 568
           GF     D  P      K+    +G     + P+  M   P+L + +S+ K+  +  +++
Sbjct: 488 GFFVQTYDEAPNHLASFKNQFQDQGPARHFSEPYFFMHQQPNLTV-DSSTKMHPETNELH 546

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAM--VQD 626
           +    N  YG  GD     G R E    NW         F      R + P +++  V  
Sbjct: 547 FWNGQNTVYGHSGDQS--QGFRFEEHPSNW-----SSQQFSRVEQPRVIRPHASIAPVDL 599

Query: 627 QEAGKSKDCKLFGIPLF-----SNHVMPEPVVSHRNTM-NEPAGNLDQQFRAFESDQKSD 680
           ++  +    K+FG  +      +NH+      +H   +  +P+ +L+Q   A ++D   +
Sbjct: 600 EKTREGSGFKIFGFKVDTASAPTNHLSSPMAATHEPALQTQPSASLNQLQHA-QTDCFPE 658

Query: 681 HSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
            S S+         NE+EK  Q +   +KDV+SK+   STRSCTKV
Sbjct: 659 VSVSTGGT------NENEKSIQQAPQSSKDVQSKSHGASTRSCTKV 698


>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
          Length = 836

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/707 (56%), Positives = 482/707 (68%), Gaps = 33/707 (4%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E AL+TELW ACAGPLVTVPR GE+V+YFPQGHIEQVEASTNQV +Q+M +Y+LP KILC
Sbjct: 18  EDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILC 77

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDEN--AVEKEPPPPPPP---RFHVHSFCKTLT 156
            V+NV+LKAEPDTDEV+AQ+TLLPES Q E+  + E+E P  P     R  VHSFCKTLT
Sbjct: 78  EVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLT 137

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFRHIFRGQPRRHLL
Sbjct: 138 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 197

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
           QSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSSVISSHSMHLGVLAT
Sbjct: 198 QSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLAT 257

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           AWHAV+TGTMFTVYYKPRTSP+EF+VPYD+YMES+K NYSIGMRFKMRFEGEEAPEQRFT
Sbjct: 258 AWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFT 317

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTIVG+ D+DP  W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+PR 
Sbjct: 318 GTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRT 377

Query: 397 KRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESD 456
           KR R N      DSS + +E ++K+ V+ S   G  R  Q QE +T +  F    S+E +
Sbjct: 378 KRLRPNATALPADSSAIAKEAATKVVVE-SEPNGTQRTFQTQENATPKSGFG--NSSELE 434

Query: 457 TAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD---PSHG 513
           +A+KS++ P   D EK +      + GS+  +   + E  Y+++LSGF    D   P   
Sbjct: 435 SAQKSIMRPSGFDREK-NNTPIQWKLGSDGRMQMSKPES-YSEMLSGFQPPKDVQIPQGF 492

Query: 514 FSSPFADAV-------PVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGD 566
           +S P             V     DQ+   N+    WS MP    L + + N  + +Q   
Sbjct: 493 WSLPEQITAGHSNFWHTVNAQYQDQQSNHNMFPSSWSFMPPNTRLGLNKQNYSM-IQEAG 551

Query: 567 VNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQ- 625
           V  Q  GN ++G  G Y  L G   E   G W    +P S+ +++   R + PK  +V  
Sbjct: 552 VLSQRPGNTKFGN-GVYAALPGRGTEQYSGGWFGHMMPNSHMDDT-QPRLIKPKPLVVAH 609

Query: 626 -DQEAGKSKDCKLFGIPLFSNHVMPEPV-----VSHRNTMNEPAGNLDQQFRAFESDQKS 679
            D +  K   CKLFGI L S     EP+     V +  T   P     ++    E ++ S
Sbjct: 610 GDVQKAKGASCKLFGIHLDSP-AKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCS 668

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D SK+ K  D  Q  +  EKPS  SQ  ++++  K+Q  STRSC KV
Sbjct: 669 DPSKAMKPLDTPQPDSVPEKPS--SQQASRNMSCKSQGVSTRSCKKV 713


>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
 gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
          Length = 853

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/704 (56%), Positives = 479/704 (68%), Gaps = 33/704 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L+TELW ACAGPLVTVPR GE+V+YFPQGHIEQVEASTNQV +Q+M +Y+LP KILC V+
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDEN--AVEKEPPPPPPP---RFHVHSFCKTLTASD 159
           NV+LKAEPDTDEV+AQ+TLLPE  Q E+  + E+E P  P     R  VHSFCKTLTASD
Sbjct: 98  NVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSG
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAWH
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AV+TGTMFTVYYKPRTSP+EF+VPYD+YMES+K NYSIGMRFKMRFEGEEAPEQRFTGTI
Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTI 337

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           VG+ D+DP  W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+PR KR 
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 397

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           R N      DSS + +E ++K+ V+ S   G  R  Q QE +T +  F    S+E ++A+
Sbjct: 398 RPNATALPADSSAIAKEAATKVVVE-SEPNGTQRTFQTQENATPKSGFG--NSSELESAQ 454

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPS--HGFSSP 517
           KS++ P   D EK +      + GS+ W+   + E  Y+++LSGF    D     GF S 
Sbjct: 455 KSIMRPSGFDREK-NNTPIQWKLGSDGWMQMSKPES-YSEMLSGFQPPKDVQTPQGFCSL 512

Query: 518 FADAVP--------VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNY 569
                         V     DQ+   N+    WS MP    L + + N  + +Q   V  
Sbjct: 513 PEQITAGHSNFWHTVNAQYQDQQSNHNMFPSSWSFMPPNTRLGLNKQNYSM-IQEAGVLS 571

Query: 570 QVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQ--DQ 627
           Q  GN ++G  G Y  L G   E   G W    +P S+ +++   R + PK  +V   D 
Sbjct: 572 QRPGNTKFGN-GVYAALPGRGTEQYSGGWFGHMMPNSHMDDT-QPRLIKPKPLVVAHGDV 629

Query: 628 EAGKSKDCKLFGIPLFSNHVMPEPV-----VSHRNTMNEPAGNLDQQFRAFESDQKSDHS 682
           +  K   CKLFGI L S     EP+     V +  T   P     ++    E ++ SD S
Sbjct: 630 QKAKGASCKLFGIHLDSP-AKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPS 688

Query: 683 KSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           K+ K  D  Q  +  EKPS  SQ  ++++  K+Q  STRSC KV
Sbjct: 689 KAMKPLDTPQPDSVPEKPS--SQQASRNMSCKSQGVSTRSCKKV 730


>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
 gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 841

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/708 (55%), Positives = 472/708 (66%), Gaps = 42/708 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
            L+ ELW ACAGPLVTVP  GERV+Y PQGHIEQVEASTNQVA+QQ  P+Y+LP KI C+
Sbjct: 28  GLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCK 87

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA----------VEKEP--PPPPPPRFHVHS 150
           V+NV+LKAEPDTDEV+AQ+TLLPE  QD N           VE+E   PP    R  VHS
Sbjct: 88  VMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHS 147

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PPTQEL AKDLHG EWRFRHIFRGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQ 207

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ N+PSSVISSHSMH
Sbjct: 208 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMH 267

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           LGVLATAWHAV+TGTMFTVYYKPRTSPSEF+VP D Y ES+K N+SIGMRFKM FEGEEA
Sbjct: 268 LGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEA 327

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            EQRFTGTIVG+ D+DP  W DSKWR LKVRWDE +++PRP+RVS W+IEPA +P  +N 
Sbjct: 328 AEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNP 387

Query: 391 LPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAER 450
           LP PR KR R N+L SSPD S + +E +SK+  + S   G  R    QE   LR  F   
Sbjct: 388 LPAPRTKRARPNVLASSPDLSAVNKEVASKVMAN-SQQNGLPRAFHSQENMNLRSRFG-- 444

Query: 451 ESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           +SNE +T++K  +W    + EK + VS  R  GS++W+   R +   +++LSGF    D 
Sbjct: 445 DSNELNTSQKLTMWSSGSNQEK-NNVSVQRELGSQSWMQMRRPDG-SSEILSGFQPLKDT 502

Query: 511 SHGFSSPFADAVPVRKSVL---------DQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
            +  SS F   +   +S           DQ    N+    WSLMP      + + N    
Sbjct: 503 RNPLSS-FPSQISGNRSNTWNTINVHYPDQNANHNMYPGTWSLMPPNTGFGVNQQNY--- 558

Query: 562 VQGGDVNYQVRG-NVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPK 620
           +   D+    R  N ++GG G +  L  + ++     WL    P S+ ++++ S  L+  
Sbjct: 559 LMTPDITLPQRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSS--LIKP 616

Query: 621 SAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQK 678
             +V D    K+K   C LFGI L S    PE ++S  +   +  G L Q   A E D+ 
Sbjct: 617 QPLVIDHNVQKAKGSSCMLFGISLDS-PAKPELLISPPSVAFD--GKLQQD--ALEEDEC 671

Query: 679 SDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           SD SK+ K  D  Q  +  EK  Q     TK+++SK Q GS+RSC KV
Sbjct: 672 SDPSKTVKPLDGAQHDSAREK-HQSCPDGTKNIQSKQQNGSSRSCKKV 718


>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
 gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
          Length = 853

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/704 (56%), Positives = 479/704 (68%), Gaps = 33/704 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L+TELW ACAGPLVTVPR GE+V+YFPQGHIEQVEASTNQV +Q+M +Y+LP KILC V+
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDEN--AVEKEPPPPPPP---RFHVHSFCKTLTASD 159
           NV+LKAEPDTDEV+AQ+TLLPES Q E+  + E+E P  P     R  VHSFCKTLTASD
Sbjct: 98  NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSG
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAWH
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AV+TGTMFTVYYKPRTSP+EF+VPYD+YMES+K NYSIGMRFKMRFEGEEAPEQRFTGTI
Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 337

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           VG+ D+DP  W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+PR KR 
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 397

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           R N      DSS + +E ++K+ V+ S   G  R  Q QE +T +  F    S+E ++A+
Sbjct: 398 RPNATALPADSSAIAKEAATKVVVE-SEPNGTQRTFQTQENATPKSGFG--NSSELESAQ 454

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPS--HGFSSP 517
           KS++ P   D EK +      + GS+  +   + E  Y+++LSGF    D     GF S 
Sbjct: 455 KSIMRPSGFDREK-NNTPIQWKLGSDGRMQMSKPES-YSEMLSGFQPPKDVQIPQGFCSL 512

Query: 518 FADAVP--------VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNY 569
                         V     DQ+   N+    WS MP    L + + N  + +Q   V  
Sbjct: 513 PEQITAGHSNFWHTVNAQYQDQQSNHNMFPSSWSFMPPNTRLGLNKQNYSM-IQEAGVLS 571

Query: 570 QVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQ--DQ 627
           Q  GN ++G  G Y  L G   E   G W    +P S+ +++   R + PK  +V   D 
Sbjct: 572 QRPGNTKFGN-GVYAALPGRGTEQYSGGWFGHMMPNSHMDDT-QPRLIKPKPLVVAHGDV 629

Query: 628 EAGKSKDCKLFGIPLFSNHVMPEPV-----VSHRNTMNEPAGNLDQQFRAFESDQKSDHS 682
           +  K   CKLFGI L S     EP+     V +  T   P     ++    E ++ SD S
Sbjct: 630 QKAKGASCKLFGIHLDSP-AKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPS 688

Query: 683 KSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           K+ K  D  Q  +  EKPS  SQ  ++++  K+Q  STRSC KV
Sbjct: 689 KAMKPLDTPQPDSVPEKPS--SQQASRNMSCKSQGVSTRSCKKV 730


>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
 gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
          Length = 852

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/704 (56%), Positives = 479/704 (68%), Gaps = 33/704 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L+TELW ACAGPLVTVPR GE+V+YFPQGHIEQVEASTNQV +Q+M +Y+LP KILC V+
Sbjct: 37  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDEN--AVEKEPPPPPPP---RFHVHSFCKTLTASD 159
           NV+LKAEPDTDEV+AQ+TLLPES Q E+  + E+E P  P     R  VHSFCKTLTASD
Sbjct: 97  NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSG
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAWH
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 276

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AV+TGTMFTVYYKPRTSP+EF+VPYD+YMES+K NYSIGMRFKMRFEGEEAPEQRFTGTI
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 336

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           VG+ D+DP  W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+PR KR 
Sbjct: 337 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 396

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           R N      DSS + +E ++K+ V+ S   G  R  Q QE +T +  F    S+E ++A+
Sbjct: 397 RPNATALPADSSAIAKEAATKVVVE-SEPNGTQRTFQTQENATPKSGFG--NSSELESAQ 453

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPS--HGFSSP 517
           KS++ P   D EK +      + GS+  +   + E  Y+++LSGF    D     GF S 
Sbjct: 454 KSIMRPSGFDREK-NNTPIQWKLGSDGRMQMSKPES-YSEMLSGFQPPKDVQIPQGFCSL 511

Query: 518 FADAVP--------VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNY 569
                         V     DQ+   N+    WS MP    L + + N  + +Q   V  
Sbjct: 512 PEQITAGHSNFWHTVNAQYQDQQSNHNMFPSSWSFMPPNTRLGLNKQNYSM-IQEAGVLS 570

Query: 570 QVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQ--DQ 627
           Q  GN ++G  G Y  L G   E   G W    +P S+ +++   R + PK  +V   D 
Sbjct: 571 QRPGNTKFGN-GVYAALPGRGTEQYSGGWFGHMMPNSHMDDT-QPRLIKPKPLVVAHGDV 628

Query: 628 EAGKSKDCKLFGIPLFSNHVMPEPV-----VSHRNTMNEPAGNLDQQFRAFESDQKSDHS 682
           +  K   CKLFGI L S     EP+     V +  T   P     ++    E ++ SD S
Sbjct: 629 QKAKGASCKLFGIHLDSP-AKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPS 687

Query: 683 KSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           K+ K  D  Q  +  EKPS  SQ  ++++  K+Q  STRSC KV
Sbjct: 688 KAMKPLDTPQPDSVPEKPS--SQQASRNMSCKSQGVSTRSCKKV 729


>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/701 (55%), Positives = 464/701 (66%), Gaps = 41/701 (5%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
            GDP   LY ELWHACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA  QM +YDLP 
Sbjct: 14  AGDP---LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPP 70

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP--PPPPRFHVHSFCKTL 155
           K+LCRVINV+LKAE DTDEV+AQV L+PE  Q+E AV+K        PPR  V SFCKTL
Sbjct: 71  KLLCRVINVELKAEADTDEVYAQVMLMPEPEQNEMAVDKSTSTTGATPPRPAVRSFCKTL 130

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLHG +WRFRHIFRGQPRRHL
Sbjct: 131 TASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHL 190

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           LQSGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMRQ  NVPSSVISSHSMHLGVLA
Sbjct: 191 LQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLA 250

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
           TAWHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRF
Sbjct: 251 TAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRF 310

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
           TGTIVG E+ D Q W +S WR LKVRWDE STIPRP+RVS WKIEPA +PP +N LP+ R
Sbjct: 311 TGTIVGSENLD-QLWPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPP-VNPLPLSR 368

Query: 396 PKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSA---TGFSRVLQGQEFSTLRGNFAERES 452
            KRPR N+ P SP+SSVLT+EG++K+++D + A      S VLQGQE  TLR N     +
Sbjct: 369 VKRPRPNVPPVSPESSVLTKEGATKIDMDSAQAQQRNQNSMVLQGQEHMTLRTNNLTGSN 428

Query: 453 NESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSH 512
           +   T +K ++W PS +  K    +  +R   ENW+  GR E  + D  SG  +  D S 
Sbjct: 429 DSDATVQKPMMWSPSPNIGKNHASAFQQRPSMENWMQLGRCETAFKDASSGAQSFGD-SQ 487

Query: 513 GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVR 572
           GF     D  P R      + + +  AR +S           +   K+  +  + ++   
Sbjct: 488 GFFMQTFDEAPNRHGSFKNQFQDHSSARHFS-----------DPYTKMHTEANEFHFWNS 536

Query: 573 GNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAM--VQDQEAG 630
            +  YG   D     G R E    NWL        F      R + P++++  V  ++A 
Sbjct: 537 QSTVYGNPRDQS--QGFRFEEHPSNWLR----QQQFSPVEQPRVIRPQASIAPVDLEKAR 590

Query: 631 KSKDCKLFGIPLF-----SNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSS 685
           +    K+FG  +      SNH+     V H   +   A     Q +    D   + S S+
Sbjct: 591 EGSGFKIFGFKVDTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIPELSVST 650

Query: 686 KLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
               +N      EK  Q +   +KDV+SK+   STRSCTKV
Sbjct: 651 AGTTEN------EKSIQQAPNSSKDVQSKSHGASTRSCTKV 685


>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
          Length = 849

 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/701 (55%), Positives = 469/701 (66%), Gaps = 31/701 (4%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +YTELW+ CAGPLVTVPR G++VYYFPQGHIEQVEASTNQVA+Q M  YDLP KILC
Sbjct: 36  EDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILC 95

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP---RFHVHSFCKTLTAS 158
            V+NV+LKAEPD DEV+AQ+TLLPES  +EN   +E P  PP    R  VHSFCKTLTAS
Sbjct: 96  EVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTAS 155

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLRRHADECLPPLDM+RQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQS
Sbjct: 156 DTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQS 215

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAW
Sbjct: 216 GWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAW 275

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HAV+TGTMFTVYYKPRTSP+EF+VP D+YMES+K NY IGMRFKMRFEGEEAPEQRFTGT
Sbjct: 276 HAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGT 335

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           IVG  D D   W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+ RPKR
Sbjct: 336 IVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKR 395

Query: 399 PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTA 458
           PRSN + S P+SS  T+E + K+ ++ +      R LQ Q+    +  F   +++E D+A
Sbjct: 396 PRSNAVASLPESSAPTKEAAPKVTLE-TQQHALQRPLQTQDNVAPKSVFG--DNSELDSA 452

Query: 459 EKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF---GANADPSHGFS 515
            KS + P   D +K   +   R+ GS+ W+   R +  Y+++LSG+      A  S GF 
Sbjct: 453 HKSSLRPSGFDLDK-STIGMQRKLGSDIWMRMNRPDG-YSEMLSGYQPPNEGARNSQGFC 510

Query: 516 S---PFADAVP-----VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDV 567
           S     A   P     V     DQ+G  NL    WS+MPS     M   +  +  + G +
Sbjct: 511 SLPDQIAAGRPNFWHTVNAHYQDQQGNHNLFPGSWSMMPSSTGFGMNRQSYPMIQEVGGM 570

Query: 568 NYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQ 627
           + Q   N ++G  G Y  L G  ++     W     P    ++ A  R + P+  ++   
Sbjct: 571 S-QSCTNTKFGN-GVYAALPGRGIDRYPSGWFGHTTPGGRVDD-AQPRVIKPQPLVLAHG 627

Query: 628 EAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSS 685
           EA K K   CKLFGI L S     EP+ S  +     A          ++D+  +  K+ 
Sbjct: 628 EALKMKGNSCKLFGIHLDSP-AKSEPLKSPPSVATPAAEKW--MADGIDADKSPEPHKTP 684

Query: 686 KLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           K     QV    E+  Q S    +  + K+Q GSTRSC KV
Sbjct: 685 KQLGATQVDPVPERCPQAS----RGTQCKSQGGSTRSCKKV 721


>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
          Length = 817

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/704 (55%), Positives = 470/704 (66%), Gaps = 31/704 (4%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G  E  +YTELW+ CAGPLVTVPR G++VYYFPQGHIEQVEASTNQVA+Q M  YDLP K
Sbjct: 66  GGTEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWK 125

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP---RFHVHSFCKTL 155
           ILC V+NV+LKAEPD DEV+AQ+TLLPES  +EN   +E P  PP    R  VHSFCKTL
Sbjct: 126 ILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTL 185

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQEL AKDLHG EWRFRHIFRGQPRRHL
Sbjct: 186 TASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 245

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           LQSGWSVFVS+KRLVAGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSHSMHLGVLA
Sbjct: 246 LQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLA 305

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
           TAWHAV+TGTMFTVYYKPRTSP+EF+VP D+YMES+K NY IGMRFKMRFEGEEAPEQRF
Sbjct: 306 TAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRF 365

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
           TGTIVG  D D   W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+ R
Sbjct: 366 TGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHR 425

Query: 396 PKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNES 455
           PKRPRSN + S P+SS  T+E + K+ ++ +      R LQ Q+    +  F   +++E 
Sbjct: 426 PKRPRSNAVASLPESSAPTKEAAPKVTLE-TQQHALQRPLQTQDNVAPKSVFG--DNSEL 482

Query: 456 DTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF---GANADPSH 512
           D+A KS + P   D +K   +   R+ GS+ W+   R +  Y+++LSG+      A  S 
Sbjct: 483 DSAHKSSLRPSGFDLDK-STIGMQRKLGSDIWMRMNRPDG-YSEMLSGYQPPNEGARNSQ 540

Query: 513 GFSS---PFADAVP-----VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQG 564
           GF S     A   P     V     DQ+G  NL    WS+MPS     M   +  +  + 
Sbjct: 541 GFCSLPDQIAAGRPNFWHTVNAHYQDQQGNHNLFPGSWSMMPSSTGFGMNRQSYPMIQEV 600

Query: 565 GDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV 624
           G ++ Q   N ++G  G Y  L G  ++     W     P    ++ A  R + P+  ++
Sbjct: 601 GGMS-QSCTNTKFGN-GVYAALPGRGIDRYPSGWFGHTTPGGRVDD-AQPRVIKPQPLVL 657

Query: 625 QDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHS 682
              EA K K   CKLFGI L S     EP+ S  +     A          ++D+  +  
Sbjct: 658 AHGEALKMKGNSCKLFGIHLDSP-AKSEPLKSPPSVATPAAEKW--MADGIDADKSPEPH 714

Query: 683 KSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           K+ K     QV    E+  Q S    +  + K+Q GSTRSC KV
Sbjct: 715 KTPKQLGATQVDPVPERCPQAS----RGTQCKSQGGSTRSCKKV 754


>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
 gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
 gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 840

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/707 (55%), Positives = 472/707 (66%), Gaps = 41/707 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
            L+ ELW ACAGPLVTVP  GERV+Y PQGHIEQVEASTNQVA+QQ  P+Y+LP KI C+
Sbjct: 28  GLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCK 87

Query: 103 VINVQLKAEPDTDEVFAQVTLLPE---------SNQDENAVEKEP--PPPPPPRFHVHSF 151
           V+NV+LKAEPDTDEV+AQ+TLLPE          N  ++ VE+E   PP    R  VHSF
Sbjct: 88  VMNVELKAEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSF 147

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PPTQEL AKDLHG EWRFRHIFRGQP
Sbjct: 148 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQP 207

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ N+PSSVISSHSMHL
Sbjct: 208 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHL 267

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           GVLATAWHAV+TGTMFTVYYKPRTSPSEF+VP D Y ES+K N+SIGMRFKM FEGEEA 
Sbjct: 268 GVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAA 327

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
           EQRFTGTIVG+ D+DP  W DSKWR LKVRWDE +++PRP+RVS W+IEPA +P  +N L
Sbjct: 328 EQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPL 387

Query: 392 PMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
           P PR KR R N+L SSPD S + +E +SK+  + S   G  R    QE   LR  F   +
Sbjct: 388 PAPRTKRARPNVLASSPDLSAVNKEVASKVMAN-SQQNGLPRAFHSQENMNLRSRFG--D 444

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPS 511
           SNE +T++K  +W    + EK + VS  R  GS++W+   R +   +++LSGF    D  
Sbjct: 445 SNELNTSQKLTMWSSGSNQEK-NNVSVQRELGSQSWMQMRRPDG-SSEILSGFQPLKDTR 502

Query: 512 HGFSSPFADAVPVRKSVL---------DQEGKFNLVARPWSLMPSGPSLKMPESNAKVPV 562
           +  SS F   +   +S           DQ    N+    WSLMP      + + N    +
Sbjct: 503 NPLSS-FPSQISGNRSNTWNTINVHYPDQNANHNMYPGTWSLMPPNTGFGVNQQNY---L 558

Query: 563 QGGDVNYQVRG-NVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
              D+    R  N ++GG G +  L  + ++     WL    P S+ ++++ S  L+   
Sbjct: 559 MTPDITLPQRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSS--LIKPQ 616

Query: 622 AMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKS 679
            +V D    K+K   C LFGI L S    PE ++S  +   +  G L Q   A E D+ S
Sbjct: 617 PLVIDHNVQKAKGSSCMLFGISLDS-PAKPELLISPPSVAFD--GKLQQD--ALEEDECS 671

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D SK+ K  D  Q  +  EK  Q     TK+++SK Q GS+RSC KV
Sbjct: 672 DPSKTVKPLDGAQHDSAREK-HQSCPDGTKNIQSKQQNGSSRSCKKV 717


>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
          Length = 751

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/701 (55%), Positives = 469/701 (66%), Gaps = 31/701 (4%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +YTELW+ CAGPLVTVPR G++VYYFPQGHIEQVEASTNQVA+Q M  YDLP KILC
Sbjct: 36  EDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILC 95

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP---RFHVHSFCKTLTAS 158
            V+NV+LKAEPD DEV+AQ+TLLPES  +EN   +E P  PP    R  VHSFCKTLTAS
Sbjct: 96  EVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTAS 155

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLRRHADECLPPLDM+RQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQS
Sbjct: 156 DTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQS 215

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAW
Sbjct: 216 GWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAW 275

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HAV+TGTMFTVYYKPRTSP+EF+VP D+YMES+K NY IGMRFKMRFEGEEAPEQRFTGT
Sbjct: 276 HAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGT 335

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           IVG  D D   W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+ RPKR
Sbjct: 336 IVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKR 395

Query: 399 PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTA 458
           PRSN + S P+SS  T+E + K+ ++ +      R LQ Q+    +  F   +++E D+A
Sbjct: 396 PRSNAVASLPESSAPTKEAAPKVTLE-TQQHALQRPLQTQDNVAPKSVFG--DNSELDSA 452

Query: 459 EKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF---GANADPSHGFS 515
            KS + P   D +K   +   R+ GS+ W+   R +  Y+++LSG+      A  S GF 
Sbjct: 453 HKSSLRPSGFDLDK-STIGMQRKLGSDIWMRMNRPD-GYSEMLSGYQPPNEGARNSQGFC 510

Query: 516 S---PFADAVP-----VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDV 567
           S     A   P     V     DQ+G  NL    WS+MPS     M   +  +  + G +
Sbjct: 511 SLPDQIAAGRPNFWHTVNAHYQDQQGNHNLFPGSWSMMPSSTGFGMNRQSYPMIQEVGGM 570

Query: 568 NYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQ 627
           + Q   N ++G  G Y  L G  ++     W     P    ++ A  R + P+  ++   
Sbjct: 571 S-QSCTNTKFGN-GVYAALPGRGIDRYPSGWFGHTTPGGRVDD-AQPRVIKPQPLVLAHG 627

Query: 628 EAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSS 685
           EA K K   CKLFGI L S     EP+ S  +     A          ++D+  +  K+ 
Sbjct: 628 EALKMKGNSCKLFGIHLDSP-AKSEPLKSPPSVATPAAEKW--MADGIDADKSPEPHKTP 684

Query: 686 KLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           K     QV    E+  Q S    +  + K+Q GSTRSC KV
Sbjct: 685 KQLGATQVDPVPERCPQAS----RGTQCKSQGGSTRSCKKV 721


>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
 gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
          Length = 850

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/702 (55%), Positives = 470/702 (66%), Gaps = 32/702 (4%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +YTELW+ CAGPLVTVPR G++VYYFPQGHIEQVEASTNQVA+Q M  YDLP KILC
Sbjct: 36  EDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILC 95

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQ-DENAVEKEPPPPPPP---RFHVHSFCKTLTA 157
            V+NV+LKAEPD DEV+AQ+TLLPES Q +EN   +E P  PP    R  VHSFCKTLTA
Sbjct: 96  EVMNVELKAEPDNDEVYAQLTLLPESKQPEENGSSEEMPASPPAALARPRVHSFCKTLTA 155

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLPPLDM+RQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 156 SDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQ 215

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVS+KRLVAGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATA
Sbjct: 216 SGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATA 275

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHAV+TGTMFTVYYKPRTSP+EF+VP D+YMES+K NY IGMRFKMRFEGEEAPEQRFTG
Sbjct: 276 WHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTG 335

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TIVG  D D   W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+ RPK
Sbjct: 336 TIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPK 395

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDT 457
           RPRSN + S P+SS  T+E + K+ ++ +      R LQ Q+    +  F   +++E D+
Sbjct: 396 RPRSNAVASLPESSAPTKEAAPKVTLE-TQQHALQRPLQTQDNVAPKSVFG--DNSELDS 452

Query: 458 AEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF---GANADPSHGF 514
           A KS + P   D +K   +   R+ GS+ W+   R +  Y+++LSG+      A  S GF
Sbjct: 453 AHKSSLRPSGFDLDK-STIGMQRKLGSDIWMRMNRPDG-YSEMLSGYQPPNEGARNSQGF 510

Query: 515 SS---PFADAVP-----VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGD 566
            S     A   P     V     DQ+G  NL    WS+MPS     M   +  +  + G 
Sbjct: 511 CSLPDQIAAGRPNFWHTVNAHYQDQQGNHNLFPGSWSMMPSSTGFGMNRQSYPMIQEVGG 570

Query: 567 VNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQD 626
           ++ Q   N ++G  G Y  L G  ++     W     P    ++ A  R + P+  ++  
Sbjct: 571 MS-QSCTNTKFGN-GVYAALPGRGIDRYPSGWFGHTTPGGRVDD-AQPRVIKPQPLVLAH 627

Query: 627 QEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKS 684
            EA K K   CKLFGI L S     EP+ S  +     A          ++D+  +  K+
Sbjct: 628 GEALKMKGNSCKLFGIHLDSP-AKSEPLKSPPSVATPAAEKW--MADGIDADKSPEPHKT 684

Query: 685 SKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
            K     QV    E+  Q S    +  + K+Q GSTRSC KV
Sbjct: 685 PKQLGATQVDPVPERCPQAS----RGTQCKSQGGSTRSCKKV 722


>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
          Length = 882

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/704 (54%), Positives = 476/704 (67%), Gaps = 31/704 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL++ELW ACAGPLVTVP+ G++V+YFPQGHIEQVEASTNQVA+Q+M +Y+LP KILC V
Sbjct: 66  ALFSELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLYNLPWKILCEV 125

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQ-DENAVEKE---PPPPPPPRFHVHSFCKTLTASD 159
           +NV+LKAE DTDEV+AQ+TLLPES Q +ENA  +E    P   P R  VHSFCKTLTASD
Sbjct: 126 MNVELKAESDTDEVYAQLTLLPESKQQEENASTEEVSAAPSAAPVRPRVHSFCKTLTASD 185

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSG
Sbjct: 186 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQSG 245

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAWH
Sbjct: 246 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 305

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AV+TGTMFTVYYKPRTSP+EF+VPYD+YMES+K NYSIGMRFKMRFEGEEAPEQRFTGTI
Sbjct: 306 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTI 365

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           VG+ D+DP  W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+PR KRP
Sbjct: 366 VGMGDSDPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVPRTKRP 425

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           R N++ S+ DSS   +E + K+  + +      R  Q QE +T +  F   + +E DT +
Sbjct: 426 RPNVIASTTDSSTQAKEVAPKVAAE-TQQHALQRAFQTQENATPKTGFG--DGSELDTTQ 482

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFG--ANADPSHGFSSP 517
           KSV+ P   + EK ++ +   + GS  W+   R E  Y+++LSGF    +     GF S 
Sbjct: 483 KSVLQPSGFEREKNNIPT-QIKLGSNGWMQMSRPES-YSEMLSGFQPPKDVQNQQGFRS- 539

Query: 518 FADAVP---------VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVN 568
           F + +          V     DQ+G  +     WSLMP      + + N  +  +   + 
Sbjct: 540 FPEQIAAGHSNFWHTVNAHYQDQQGSHSTFPGSWSLMPQNTGFGLNKQNYPMMQEVAGLP 599

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QD 626
            Q   N ++G  G Y  L G   +     W    +P S+ +++   R + P+  +V   D
Sbjct: 600 -QRAANTKFGN-GGYAALPGRGFDQYSTGWFGHMMPSSHMDDT-QPRVIKPQPLVVGHGD 656

Query: 627 QEAGKSKDCKLFGI----PLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHS 682
            +  K   CKLFGI    P  S  +   P V++    + P      +  A E ++  D S
Sbjct: 657 MQKTKGASCKLFGIHLDSPAKSEPLKSPPSVAYDGMPHTPGSAELCRMDATEPEKCYDPS 716

Query: 683 KSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           K+ K  D     +  EK     Q  +++   K++ GS RSC KV
Sbjct: 717 KTPKPLDAPYADSVPEK-HLSCQQASRNASGKSRGGSARSCKKV 759


>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
          Length = 857

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/706 (55%), Positives = 470/706 (66%), Gaps = 32/706 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L+TELW ACAGPLVTVPR GE+ +YFPQGHIEQVEASTNQV +Q+M +Y+LP KILC V+
Sbjct: 37  LFTELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96

Query: 105 NVQLKAEPDTDEVFAQVTLLPE-SNQDENAVEKEPPPPPPPRFHV----HSFCKTLTASD 159
           NV+LKAEPDTDEV+AQ+TLLPE   Q++N   +E  P  P   HV    HSFCKTLTASD
Sbjct: 97  NVELKAEPDTDEVYAQLTLLPELKRQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSG
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSSVISSHSMHLGVLATAWH
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 276

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AV+TGTMFTVYYKPRTSP+EF+VPYD+YMES+K NYSIGMRFKMRFE EEAPEQRFTGTI
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFESEEAPEQRFTGTI 336

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           VG+ D+DP  W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP +N LP+PR KR 
Sbjct: 337 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 396

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAE 459
           R N      DSS + +E ++K+ V+ S   G  R  Q QE +T +  F    S+E ++A+
Sbjct: 397 RPNATALPADSSAIAKEAATKVVVE-SEPNGTQRTFQTQENATPKSGFG--NSSELESAQ 453

Query: 460 KSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPS--HGFSSP 517
           KS++ P   D EK +      + GS+  +   + E  Y+++LSGF    D     GF S 
Sbjct: 454 KSIMRPSGFDREK-NNTPIQWKLGSDGRMQMSKPES-YSEMLSGFQPPKDVQTPQGFCSL 511

Query: 518 FADAVP--------VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNY 569
                         V     DQ+   N+    WS MP    L + + N  + +Q   V  
Sbjct: 512 PEQITAGHSNFWHTVNAQYQDQQSNHNMFPSSWSFMPPNTRLGLNKQNYSM-IQEAGVLS 570

Query: 570 QVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQ--DQ 627
           Q  GN ++G  G Y  L G   E   G W    +P S+ +++   R + PK  +V   D 
Sbjct: 571 QRPGNTKFGN-GVYAALPGRGTEQYSGGWFGLMMPNSHMDDT-QPRLIKPKPLVVAHGDV 628

Query: 628 EAGKSKDCKLFGI----PLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSK 683
           +  K   CKLFGI    P  S        V +  T   P     ++    E ++ SD SK
Sbjct: 629 QKAKGASCKLFGIHLDSPAKSEPSKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSK 688

Query: 684 SSKLADDNQVFNEHEKPSQPSQTHTKDVRS---KTQCGSTRSCTKV 726
           + K  D  Q  +  EKPS    +  +  R+   K+Q  STRSC KV
Sbjct: 689 AMKPLDTPQPDSVPEKPSSQQASSQQASRNMSCKSQGVSTRSCKKV 734


>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
 gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 812

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/707 (54%), Positives = 464/707 (65%), Gaps = 45/707 (6%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELW ACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA   M +YDLPSK
Sbjct: 17  GDP---LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPSK 73

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-PPPPPRFHVHSFCKTLTA 157
           +LCRV+NV+LKAE DTDEV+AQ+ L+PE  Q++ A EK       PPR  V SFCKTLTA
Sbjct: 74  LLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTA 133

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLP LDMS+ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 134 SDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 193

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLATA
Sbjct: 194 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 253

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTG
Sbjct: 254 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 313

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TIVG E+ DP  W DS WR LKVRWDE STIPRP++VS WKIEPA +PP +N LP+ R K
Sbjct: 314 TIVGCENLDP-LWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP-VNPLPLSRGK 371

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDT 457
           RPR N  P SP+SSVLT+EG++K++ D +     + VLQ QE  + R N  E   ++S T
Sbjct: 372 RPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRNNLTESTDSDS-T 430

Query: 458 AEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF------GANADPS 511
            +K ++W PS  + K+   +   R   +NW+P GR E  + D  S F        +   +
Sbjct: 431 VQKQMMWSPS-PNGKVH-TNFQPRPAMDNWMPLGRRETDFKDTRSAFKDARTASQSFGDT 488

Query: 512 HGFSSPFADAVPVRKSVLDQ---EGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVN 568
            GF     D    R S  +Q   +G  +  A P+  MP  PSL + ES  +      D+ 
Sbjct: 489 QGFFMQAYDDSRHRLSFNNQFQDQGSAHRFADPYFYMPQQPSLTV-ESGTRTQTANNDLR 547

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QD 626
           +    N  YG   D     G     +  +WL  PLP         SR + P + +     
Sbjct: 548 FWSERNSMYGNPSD--QQQGFSFGQNTSSWLNQPLP-----QVEQSRVVRPHATVAPFDL 600

Query: 627 QEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMNE------PAGNLDQ-QFRAFESDQKS 679
           ++  +    K+FG  + + +  P  + S  + + E      P+  +++ Q    E   + 
Sbjct: 601 EKTREGSGFKIFGFQVDTTNPSPVQLSSPLSAIREHVVQTRPSAPVNELQPVQIECLPEV 660

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S +   A++ Q            Q  +KD++SK+Q  STRSCTKV
Sbjct: 661 SVSTAGTAAENIQQV----------QQSSKDIQSKSQGASTRSCTKV 697


>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
 gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 806

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/707 (54%), Positives = 464/707 (65%), Gaps = 45/707 (6%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELW ACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA   M +YDLPSK
Sbjct: 17  GDP---LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPSK 73

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-PPPPPRFHVHSFCKTLTA 157
           +LCRV+NV+LKAE DTDEV+AQ+ L+PE  Q++ A EK       PPR  V SFCKTLTA
Sbjct: 74  LLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTA 133

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLP LDMS+ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 134 SDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 193

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLATA
Sbjct: 194 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 253

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTG
Sbjct: 254 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 313

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TIVG E+ DP  W DS WR LKVRWDE STIPRP++VS WKIEPA +PP +N LP+ R K
Sbjct: 314 TIVGCENLDP-LWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP-VNPLPLSRGK 371

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDT 457
           RPR N  P SP+SSVLT+EG++K++ D +     + VLQ QE  + R N  E   ++S T
Sbjct: 372 RPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRNNLTESTDSDS-T 430

Query: 458 AEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF------GANADPS 511
            +K ++W PS  + K+   +   R   +NW+P GR E  + D  S F        +   +
Sbjct: 431 VQKQMMWSPS-PNGKVH-TNFQPRPAMDNWMPLGRRETDFKDTRSAFKDARTASQSFGDT 488

Query: 512 HGFSSPFADAVPVRKSVLDQ---EGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVN 568
            GF     D    R S  +Q   +G  +  A P+  MP  PSL + ES  +      D+ 
Sbjct: 489 QGFFMQAYDDSRHRLSFNNQFQDQGSAHRFADPYFYMPQQPSLTV-ESGTRTQTANNDLR 547

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QD 626
           +    N  YG   D     G     +  +WL  PLP         SR + P + +     
Sbjct: 548 FWSERNSMYGNPSD--QQQGFSFGQNTSSWLNQPLP-----QVEQSRVVRPHATVAPFDL 600

Query: 627 QEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMNE------PAGNLDQ-QFRAFESDQKS 679
           ++  +    K+FG  + + +  P  + S  + + E      P+  +++ Q    E   + 
Sbjct: 601 EKTREGSGFKIFGFQVDTTNPSPVQLSSPLSAIREHVVQTRPSAPVNELQPVQIECLPEV 660

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S +   A++ Q            Q  +KD++SK+Q  STRSCTKV
Sbjct: 661 SVSTAGTAAENIQQV----------QQSSKDIQSKSQGASTRSCTKV 697


>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
          Length = 801

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/707 (54%), Positives = 464/707 (65%), Gaps = 45/707 (6%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELW ACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA   M +YDLPSK
Sbjct: 12  GDP---LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPSK 68

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-PPPPPRFHVHSFCKTLTA 157
           +LCRV+NV+LKAE DTDEV+AQ+ L+PE  Q++ A EK       PPR  V SFCKTLTA
Sbjct: 69  LLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTA 128

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLP LDMS+ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 129 SDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 188

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLATA
Sbjct: 189 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 248

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTG
Sbjct: 249 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 308

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TIVG E+ DP  W DS WR LKVRWDE STIPRP++VS WKIEPA +PP +N LP+ R K
Sbjct: 309 TIVGCENLDP-LWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP-VNPLPLSRGK 366

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDT 457
           RPR N  P SP+SSVLT+EG++K++ D +     + VLQ QE  + R N  E   ++S T
Sbjct: 367 RPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRNNLTESTDSDS-T 425

Query: 458 AEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF------GANADPS 511
            +K ++W PS  + K+   +   R   +NW+P GR E  + D  S F        +   +
Sbjct: 426 VQKQMMWSPS-PNGKVH-TNFQPRPAMDNWMPLGRRETDFKDTRSAFKDARTASQSFGDT 483

Query: 512 HGFSSPFADAVPVRKSVLDQ---EGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVN 568
            GF     D    R S  +Q   +G  +  A P+  MP  PSL + ES  +      D+ 
Sbjct: 484 QGFFMQAYDDSRHRLSFNNQFQDQGSAHRFADPYFYMPQQPSLTV-ESGTRTQTANNDLR 542

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QD 626
           +    N  YG   D     G     +  +WL  PLP         SR + P + +     
Sbjct: 543 FWSERNSMYGNPSD--QQQGFSFGQNTSSWLNQPLP-----QVEQSRVVRPHATVAPFDL 595

Query: 627 QEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMNE------PAGNLDQ-QFRAFESDQKS 679
           ++  +    K+FG  + + +  P  + S  + + E      P+  +++ Q    E   + 
Sbjct: 596 EKTREGSGFKIFGFQVDTTNPSPVQLSSPLSAIREHVVQTRPSAPVNELQPVQIECLPEV 655

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S +   A++ Q            Q  +KD++SK+Q  STRSCTKV
Sbjct: 656 SVSTAGTAAENIQQV----------QQSSKDIQSKSQGASTRSCTKV 692


>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 728

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/707 (54%), Positives = 464/707 (65%), Gaps = 45/707 (6%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELW ACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA   M +YDLPSK
Sbjct: 17  GDP---LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPSK 73

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-PPPPPRFHVHSFCKTLTA 157
           +LCRV+NV+LKAE DTDEV+AQ+ L+PE  Q++ A EK       PPR  V SFCKTLTA
Sbjct: 74  LLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTA 133

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLP LDMS+ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 134 SDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 193

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLATA
Sbjct: 194 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 253

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTG
Sbjct: 254 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 313

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TIVG E+ DP  W DS WR LKVRWDE STIPRP++VS WKIEPA +PP +N LP+ R K
Sbjct: 314 TIVGCENLDP-LWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPP-VNPLPLSRGK 371

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDT 457
           RPR N  P SP+SSVLT+EG++K++ D +     + VLQ QE  + R N  E   ++S T
Sbjct: 372 RPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMSFRNNLTESTDSDS-T 430

Query: 458 AEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF------GANADPS 511
            +K ++W PS  + K+   +   R   +NW+P GR E  + D  S F        +   +
Sbjct: 431 VQKQMMWSPS-PNGKVH-TNFQPRPAMDNWMPLGRRETDFKDTRSAFKDARTASQSFGDT 488

Query: 512 HGFSSPFADAVPVRKSVLDQ---EGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVN 568
            GF     D    R S  +Q   +G  +  A P+  MP  PSL + ES  +      D+ 
Sbjct: 489 QGFFMQAYDDSRHRLSFNNQFQDQGSAHRFADPYFYMPQQPSLTV-ESGTRTQTANNDLR 547

Query: 569 YQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QD 626
           +    N  YG   D     G     +  +WL  PLP         SR + P + +     
Sbjct: 548 FWSERNSMYGNPSD--QQQGFSFGQNTSSWLNQPLP-----QVEQSRVVRPHATVAPFDL 600

Query: 627 QEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMNE------PAGNLDQ-QFRAFESDQKS 679
           ++  +    K+FG  + + +  P  + S  + + E      P+  +++ Q    E   + 
Sbjct: 601 EKTREGSGFKIFGFQVDTTNPSPVQLSSPLSAIREHVVQTRPSAPVNELQPVQIECLPEV 660

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S +   A++ Q            Q  +KD++SK+Q  STRSCTKV
Sbjct: 661 SVSTAGTAAENIQQV----------QQSSKDIQSKSQGASTRSCTKV 697


>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
 gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
          Length = 704

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/702 (54%), Positives = 458/702 (65%), Gaps = 30/702 (4%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELW ACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA  QM +YDLPSK
Sbjct: 18  GDP---LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPSK 74

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQ-DENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           +LCRV+NV+LKAE DTDEV+AQ+ L+PE  Q D  A +        PR  V SFCKTLTA
Sbjct: 75  LLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVAAEKASSASAASPRPAVRSFCKTLTA 134

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 135 SDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 194

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLATA
Sbjct: 195 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 254

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTG
Sbjct: 255 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 314

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRP 396
           TIVG E+ DP  W DS WR LKVRWDE STIPRP+RVS WKIEPA +PP +N LP+  R 
Sbjct: 315 TIVGCENLDP-LWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPP-VNPLPLSSRV 372

Query: 397 KRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESD 456
           KRPR N  P SP++SVLT+E ++K+++D +     + VLQGQE  TLR N    ESN+SD
Sbjct: 373 KRPRQNAPPPSPEASVLTKESAAKIDIDSAQTQHQNSVLQGQEQMTLRNNLT--ESNDSD 430

Query: 457 -TAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPS---- 511
            T +K ++W PS + +     +  +R   ++W+P GR E  + D  S F      S    
Sbjct: 431 STVQKPMMWSPSPNGKAH--TNFQQRPAMDSWMPMGRRETDFKDSRSAFKDARTASQSFR 488

Query: 512 --HGFSSPFADAVPVRKSVLDQ---EGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGD 566
              GF     D    R S  +Q   +G  +  A P+  M   PSL + ES+ +      D
Sbjct: 489 DTQGFFMQAYDDNHHRLSFNNQFQDQGSAHRFADPYFYMAQQPSLTV-ESSTRTQTANND 547

Query: 567 VNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV-- 624
           + +    N  YG  GD      +  ++   +WL  P P          R + P + +   
Sbjct: 548 LRFWGDQNSIYGNPGDQQQQGFSFGQNP-SSWLNQPFP-----QVEQPRVVRPHATVAPF 601

Query: 625 QDQEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKS 684
             ++  +    K+FG  + +    P  + S    + E            E     +    
Sbjct: 602 DLEKTREGSGFKIFGFQVDTTSPSPAQLSSPLCAIREHVVQTRPSAPVNELQPVQNECLP 661

Query: 685 SKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
                      E+EK  Q +Q  +KD++SK+Q  STRSCTKV
Sbjct: 662 EGSVSTAGTATENEKNIQQAQPSSKDIQSKSQGASTRSCTKV 703


>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 805

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/702 (53%), Positives = 451/702 (64%), Gaps = 38/702 (5%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELW ACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA  QM +YDLP K
Sbjct: 18  GDP---LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPK 74

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK-EPPPPPPPRFHVHSFCKTLTA 157
           +LCRV+NV+LKAE DTDEV+AQ+ L+PE  Q +   EK    P   PR  V SFCKTLTA
Sbjct: 75  LLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTA 134

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 135 SDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 194

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLATA
Sbjct: 195 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 254

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTG
Sbjct: 255 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 314

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TIVG E+ DP  W DS WR LKVRWDE STIPRP+RVS WKIEPA +PP    +   R K
Sbjct: 315 TIVGCENLDP-LWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 373

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDT 457
           RPR N+ P S +SSVLT+EG++K+ +D +     + VLQGQE  TLR N  E   ++S T
Sbjct: 374 RPRQNVPPPSLESSVLTKEGATKVEIDSAQTQHQNSVLQGQEQMTLRNNLTESADSDS-T 432

Query: 458 AEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSP 517
            +K ++W PSL+ +        +R   +NW+P GR E  + D  S F      S  F   
Sbjct: 433 VQKPMMWSPSLNGKAH--THFQQRPAMDNWMPLGRRENDFKDTRSAFKDARTASQSFGDT 490

Query: 518 ---FADAVPVRKSVLD--QEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVR 572
              F  A       L    +G  +  A P+  MP   S+ + ES+ +      D+ +   
Sbjct: 491 QGFFVQAYDDNHHRLSFKNQGSTHRFADPYFYMPQQSSVTV-ESSTRTQTANNDLCFWGD 549

Query: 573 GNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QDQEAG 630
            N  YG   D     G     +  +WL  P P          R + P + +     ++  
Sbjct: 550 QNAMYGNPSD--QQQGFNFGQNPSSWLNQPFP-----QVEQPRVVRPHATVAPFDLEKTR 602

Query: 631 KSKDCKLFGIPLFSNH------VMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKS 684
           +    K+FG  + +          P P +        P+  ++ + +  + +   + S S
Sbjct: 603 EGSGFKIFGFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVN-ELQPVQIECLPEGSVS 661

Query: 685 SKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           +       +        Q +   +KD++SK+Q  STRSCTKV
Sbjct: 662 TAGTATENI--------QQAPQSSKDIQSKSQGASTRSCTKV 695


>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
          Length = 799

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/702 (53%), Positives = 451/702 (64%), Gaps = 38/702 (5%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELW ACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA  QM +YDLP K
Sbjct: 12  GDP---LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPK 68

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK-EPPPPPPPRFHVHSFCKTLTA 157
           +LCRV+NV+LKAE DTDEV+AQ+ L+PE  Q +   EK    P   PR  V SFCKTLTA
Sbjct: 69  LLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTA 128

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 129 SDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 188

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLATA
Sbjct: 189 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 248

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTG
Sbjct: 249 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 308

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TIVG E+ DP  W DS WR LKVRWDE STIPRP+RVS WKIEPA +PP    +   R K
Sbjct: 309 TIVGCENLDP-LWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 367

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDT 457
           RPR N+ P S +SSVLT+EG++K+ +D +     + VLQGQE  TLR N  E   ++S T
Sbjct: 368 RPRQNVPPPSLESSVLTKEGATKVEIDSAQTQHQNSVLQGQEQMTLRNNLTESADSDS-T 426

Query: 458 AEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSP 517
            +K ++W PSL+ +        +R   +NW+P GR E  + D  S F      S  F   
Sbjct: 427 VQKPMMWSPSLNGKAH--THFQQRPAMDNWMPLGRRENDFKDTRSAFKDARTASQSFGDT 484

Query: 518 ---FADAVPVRKSVLD--QEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVR 572
              F  A       L    +G  +  A P+  MP   S+ + ES+ +      D+ +   
Sbjct: 485 QGFFVQAYDDNHHRLSFKNQGSTHRFADPYFYMPQQSSVTV-ESSTRTQTANNDLCFWGD 543

Query: 573 GNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QDQEAG 630
            N  YG   D     G     +  +WL  P P          R + P + +     ++  
Sbjct: 544 QNAMYGNPSD--QQQGFNFGQNPSSWLNQPFP-----QVEQPRVVRPHATVAPFDLEKTR 596

Query: 631 KSKDCKLFGIPLFSNH------VMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKS 684
           +    K+FG  + +          P P +        P+  ++ + +  + +   + S S
Sbjct: 597 EGSGFKIFGFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVN-ELQPVQIECLPEGSVS 655

Query: 685 SKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           +       +        Q +   +KD++SK+Q  STRSCTKV
Sbjct: 656 TAGTATENI--------QQAPQSSKDIQSKSQGASTRSCTKV 689


>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 822

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/702 (53%), Positives = 451/702 (64%), Gaps = 38/702 (5%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GDP   LY ELW ACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVA  QM +YDLP K
Sbjct: 18  GDP---LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPK 74

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK-EPPPPPPPRFHVHSFCKTLTA 157
           +LCRV+NV+LKAE DTDEV+AQ+ L+PE  Q +   EK    P   PR  V SFCKTLTA
Sbjct: 75  LLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTA 134

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQ
Sbjct: 135 SDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 194

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGVLATA
Sbjct: 195 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 254

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTG
Sbjct: 255 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 314

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TIVG E+ DP  W DS WR LKVRWDE STIPRP+RVS WKIEPA +PP    +   R K
Sbjct: 315 TIVGCENLDP-LWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 373

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDT 457
           RPR N+ P S +SSVLT+EG++K+ +D +     + VLQGQE  TLR N  E   ++S T
Sbjct: 374 RPRQNVPPPSLESSVLTKEGATKVEIDSAQTQHQNSVLQGQEQMTLRNNLTESADSDS-T 432

Query: 458 AEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSP 517
            +K ++W PSL+ +        +R   +NW+P GR E  + D  S F      S  F   
Sbjct: 433 VQKPMMWSPSLNGKAH--THFQQRPAMDNWMPLGRRENDFKDTRSAFKDARTASQSFGDT 490

Query: 518 ---FADAVPVRKSVLD--QEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVR 572
              F  A       L    +G  +  A P+  MP   S+ + ES+ +      D+ +   
Sbjct: 491 QGFFVQAYDDNHHRLSFKNQGSTHRFADPYFYMPQQSSVTV-ESSTRTQTANNDLCFWGD 549

Query: 573 GNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QDQEAG 630
            N  YG   D     G     +  +WL  P P          R + P + +     ++  
Sbjct: 550 QNAMYGNPSD--QQQGFNFGQNPSSWLNQPFP-----QVEQPRVVRPHATVAPFDLEKTR 602

Query: 631 KSKDCKLFGIPLFSNH------VMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKS 684
           +    K+FG  + +          P P +        P+  ++ + +  + +   + S S
Sbjct: 603 EGSGFKIFGFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVN-ELQPVQIECLPEGSVS 661

Query: 685 SKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           +       +        Q +   +KD++SK+Q  STRSCTKV
Sbjct: 662 TAGTATENI--------QQAPQSSKDIQSKSQGASTRSCTKV 695


>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
 gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
          Length = 787

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/711 (54%), Positives = 466/711 (65%), Gaps = 46/711 (6%)

Query: 27  NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVA 86
           N N      K  GD   ALY ELWHACAGPLVTVPR+GE V+YFPQGHIEQVEASTNQ A
Sbjct: 4   NGNGIAVSGKDSGD---ALYKELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQAA 60

Query: 87  DQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF 146
           D+QMP YDLP KILCRV+NVQLKAEPDTDEVFAQ+TLLP+S QDEN VEK+  P P  R 
Sbjct: 61  DEQMPAYDLPGKILCRVVNVQLKAEPDTDEVFAQITLLPQSEQDENLVEKKALPAPT-RP 119

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
            VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS QPP QEL AKDL GNEWRFRHI
Sbjct: 120 RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRFRHI 179

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           FRGQPRRHLLQSGWS+FVS+K+LVAGDAFIFLRGE GELRVGVRRAMRQ  NVPSS +SS
Sbjct: 180 FRGQPRRHLLQSGWSLFVSAKKLVAGDAFIFLRGETGELRVGVRRAMRQSCNVPSSFMSS 239

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFE 326
           HSMH+G+LATAWHAVSTGTMFTVYYKPRTSP+EFI+P D+YMES+KNN++IGMRFKMRFE
Sbjct: 240 HSMHIGILATAWHAVSTGTMFTVYYKPRTSPAEFIIPMDKYMESVKNNFTIGMRFKMRFE 299

Query: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
            EEAPEQRF GT++G+E ADP+RW  S+WRCLKVRWDETS++ RP+RVS W++EPALAP 
Sbjct: 300 AEEAPEQRFLGTVIGVEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVEPALAP- 358

Query: 387 ALNSLPMPRPKRPRSNM-LPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRG 445
            L+ LP  R KR RSNM +PS+  S+V+ ++  + L+ DP          Q Q+  T+R 
Sbjct: 359 -LDPLPTCRLKRSRSNMPMPSADSSAVMKKD--NWLSRDP----------QNQDIPTMRS 405

Query: 446 NFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFG 505
             A   +N  DTA+    W      ++       RR G +N +P       Y +  +G  
Sbjct: 406 KLA--VNNYLDTAQNPNGWTLFQGKDQNGTDFDKRRSGPDNGMPQMMPGVEYKNSTTG-P 462

Query: 506 ANADPSHGFSSPFADAVP-----VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKV 560
                ++ FS P  +  P     ++     QE KFN    P  +  S P    PES  K+
Sbjct: 463 DTIHETYDFSRPLVEFHPANVDQLKTHAFGQESKFNRCP-PCKMHSSSPH-NTPES--KL 518

Query: 561 PVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH--SRELM 618
            +      Y    N++         ++G  V++  G+W+    P +N +NS +  S +L 
Sbjct: 519 ELCASKNKYHSL-NIKSDTLRQNDTVHGLEVDYQPGSWIS---PLTNADNSPYLASEKLY 574

Query: 619 PKSAMVQDQEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLD---QQFRAFES 675
           P +    + ++ +  +CKLFGI L S+ V  E      N M+ P G  +    + + F S
Sbjct: 575 PVALQQHEVKSKEDGNCKLFGISLISSPVPMENATVDNNFMHRPQGLFNLASDKLQDFGS 634

Query: 676 DQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D      K  K   D+ +  E EK    S      +  K Q GSTR C KV
Sbjct: 635 DLSLQQLKKPKFF-DSTIRCEEEKLFMASHF----IEGKLQNGSTR-CVKV 679


>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 826

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/712 (52%), Positives = 462/712 (64%), Gaps = 51/712 (7%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
            GDP   LY ELWHACAGPLVTVPR G+ VYYFPQGHIEQVEAS NQVA  QM +YDLPS
Sbjct: 18  TGDP---LYDELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLYDLPS 74

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA---VEKEPPPPP---PPRFHVHSF 151
           K+LCRV+NV+LKAE DTDEV+AQV L+PE  Q E A    EK         P R  V SF
Sbjct: 75  KLLCRVLNVELKAEADTDEVYAQVMLMPEPEQSEAAATTTEKSSSATGGTMPARPAVRSF 134

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLHG EWRFRHIFRGQP
Sbjct: 135 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQP 194

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLLQSGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMRQ  N+ SSVISSHSMHL
Sbjct: 195 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHL 254

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           GVLATAWHA++T TMFTVYYKPRTS SEFI+PYD+Y ES+KN YSIG RFKMRFEGEEAP
Sbjct: 255 GVLATAWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAP 314

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
           EQRFTGTIVG ++ D Q W +S WR LKVRWDE+STIPRP+RVS W+IEPA +PP +N L
Sbjct: 315 EQRFTGTIVGSDNLD-QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPP-VNPL 372

Query: 392 PMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSA--TGFSRVLQGQEFSTLRGNFAE 449
           P+ R KR R N+ P+SP+SSV T+EG++K ++D + A     + VL G E    R N   
Sbjct: 373 PLSRAKRSRPNVPPASPESSVRTKEGATKADMDCAQAQRNQNNTVLPGHE---QRSNKLT 429

Query: 450 RESNESDTAEKSVVW---PPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGA 506
             ++   T +K +VW   PP++   K + ++  +R    N +   R E  + D  SG   
Sbjct: 430 DINDFDATVQKPMVWSTPPPNIG--KNNPLTFQQRPSVHNSIQLRRREADFKDASSGAQH 487

Query: 507 NADPSHGFSSPFADAVPVRKSVLDQEGKFNLVAR----PWSLMPSGPSLKMPESNAKVPV 562
             D    F     D  P R      + + +  AR    P+  M   PSL + ES+ K+  
Sbjct: 488 FGDSLGFFMQTTFDEAPNRLGSFKNQFQDHSYARQFADPYLFMHQQPSLTV-ESSRKMHT 546

Query: 563 QGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSA 622
           +  ++++       YG   D+  +   R +    NWL P      F  +   R + P ++
Sbjct: 547 ENNELHFWNGPGTVYGNSIDH--VQDFRFKEHPSNWLSP-----QFSRAEQPRVIRPHAS 599

Query: 623 M--VQDQEAGKSKDCKLFGIPLFS-----NHVMPEPVVSHRNTM-NEPAGNLDQQFRAFE 674
           +  ++ ++  +  D K+FG  + +     NH+      +H   +  +P+ +LD      +
Sbjct: 600 IAPIELEKTTEGSDFKIFGFKVDTASAGFNHLNSPMAATHEPVLQTQPSVSLDH----LQ 655

Query: 675 SDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           +D   + S S     DN      EK  Q     +KDV+SK+   STRSCTKV
Sbjct: 656 TDCSPEVSLSIAGTTDN------EKNIQQCPQSSKDVQSKSHGASTRSCTKV 701


>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
          Length = 813

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/707 (52%), Positives = 452/707 (63%), Gaps = 45/707 (6%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCRV 103
           LY ELW ACAGPLV+VP  GERV+YFPQGHIEQVEASTNQVA+QQ  P+Y+LP KI C+V
Sbjct: 20  LYAELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAV---EKEPPPPPPPRFH----VHSFCKTLT 156
           +NV+LKAE DTDEV+AQ+TLLPE  Q+E+A    EKE  P   P  H    VHSFCKTLT
Sbjct: 80  MNVELKAEQDTDEVYAQLTLLPE-KQNEHASTEGEKEEVPAAVPAVHERPRVHSFCKTLT 138

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSVLRRHADECLPPLDMS+ PPTQEL  +DLHG EWRFRHIFRGQP+RHLL
Sbjct: 139 ASDTSTHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKRHLL 198

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
           QSGWSVFVS+KRLVA DAFIFLRGENGELRVGVRRAMRQQ N+PSSVISSHSMHLGVLAT
Sbjct: 199 QSGWSVFVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLAT 258

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           AWHAV+TG+MFTVYYKPRTSP+EF+VP D Y ES+K N+SIGMRFKMRFEGEEA EQRFT
Sbjct: 259 AWHAVNTGSMFTVYYKPRTSPAEFVVPCDLYYESMKRNHSIGMRFKMRFEGEEAAEQRFT 318

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTIVGI D+DP  W DSKWR LKVRWDE S++PRP+RVS W+IEPA++P ++N L  PR 
Sbjct: 319 GTIVGIGDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVSPLSVNPLQAPRN 378

Query: 397 KRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESD 456
           KR R N + SSP+ S + RE SSK+  + S   G  R LQ QE  T    F +   N   
Sbjct: 379 KRSRPNAIASSPELSPVNREVSSKVTAN-SQHNGLPRALQRQESETSTSRFGD---NNVK 434

Query: 457 TAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD---PSHG 513
           T  K  +WP   D EK ++   + +  SE W+   R E  YT+++S F    D   P   
Sbjct: 435 TPGKLTMWPSRTDQEKSNI---TVQRSSEGWMQMQRPEG-YTNIVSRFQPLKDAQNPPCS 490

Query: 514 FSSPFADAVPVRKSVL-----DQEGKFNLVARPWSLMPSGPSLKMPESNA-----KVPVQ 563
           F S  +       +++     DQ+   N     WS MP      + + N      + P Q
Sbjct: 491 FPSQISGNCSNTWNIVNVHYPDQQVNRNTFPGTWSCMPPNSGFGVNQHNYLMTPDRAPSQ 550

Query: 564 GGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAM 623
             +       N ++   GD+  +    ++     W     P  + ++++ S  ++    +
Sbjct: 551 RAE-------NAKFSWNGDFTSVQARGIDERSLGWFEHAEPNPHIDDASSS--VIKSHPL 601

Query: 624 VQDQEAGKSKDCKLFGIPL----FSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKS 679
                  K   C LFG PL     S  ++  P V++      P      Q    E D+  
Sbjct: 602 GHALGKTKGSPCMLFGFPLDGPAKSEPMISPPSVAYDGMPETPCSEKQPQPEVIELDRSP 661

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             SK     D+NQ  +   K  Q     T++++SK QC STRSC KV
Sbjct: 662 GTSKLVSPLDENQSDSAMAK-HQTCPEATRNIQSKLQC-STRSCKKV 706


>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
          Length = 737

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 321/471 (68%), Positives = 365/471 (77%), Gaps = 9/471 (1%)

Query: 12  MKSCNETGRIPMEGQNSNSTTSGVKRVG--------DPEMALYTELWHACAGPLVTVPRE 63
           M SC E  +      N +S   G+  V         D    LYTELWHACAGPLV+VP+ 
Sbjct: 1   MGSCGEGLKGLCPRVNGSSGGDGLSNVSSEPSAGFRDANDGLYTELWHACAGPLVSVPQM 60

Query: 64  GERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTL 123
           G++V+YFPQGH EQVE STNQ ADQ MP YDLPSKILCRV+NV LKAEPDTDEV+AQ+TL
Sbjct: 61  GDKVFYFPQGHTEQVEKSTNQGADQPMPNYDLPSKILCRVVNVWLKAEPDTDEVYAQLTL 120

Query: 124 LPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS 183
           +PE NQDE  +EKE    PP R HV+SFCKTLTASDTSTHGGFSVLRRHA+ECLP LDMS
Sbjct: 121 IPEPNQDETTLEKETVQSPPRRPHVYSFCKTLTASDTSTHGGFSVLRRHAEECLPRLDMS 180

Query: 184 RQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENG 243
           +QPPTQEL AKDLHG EWRFRHIFRGQPRRHLL +GWS FVSSKRLVAGDAFIFLRGENG
Sbjct: 181 QQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLTTGWSAFVSSKRLVAGDAFIFLRGENG 240

Query: 244 ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
           ELRVGVRRA+RQQ N+P+SVISSHSMHLGVLATA HA STGTMF+V+Y+PRTSPSEF++P
Sbjct: 241 ELRVGVRRALRQQNNMPTSVISSHSMHLGVLATAMHAFSTGTMFSVFYRPRTSPSEFVIP 300

Query: 304 YDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWD 363
           YDQYMES+KNNYSIGMRF+MRFEGEE PEQRFTGTIVG+ED D  RW  SKWRCLKV+WD
Sbjct: 301 YDQYMESVKNNYSIGMRFRMRFEGEETPEQRFTGTIVGVEDYDSNRWPASKWRCLKVQWD 360

Query: 364 ETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNV 423
           E S++ RP RVS WKIEP+ AP A+N  P+PR KRPR+N +PS  D S L+REG  +   
Sbjct: 361 EQSSVERPLRVSPWKIEPSAAPTAINPPPIPRAKRPRTN-VPSPSDVSHLSREGLPRGMT 419

Query: 424 DPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKID 474
           + S    +  VLQGQE   L G      +N   + +KS +W P L   K D
Sbjct: 420 EHSQPPRYPGVLQGQEGMALVGGPFSSGTNNPQSHQKSSMWAPPLLPPKED 470


>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
          Length = 856

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 365/705 (51%), Positives = 458/705 (64%), Gaps = 38/705 (5%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
            GDP   LY ELWHACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVAD QM +YDLPS
Sbjct: 12  TGDP---LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPS 68

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP----PRFHVHSFCK 153
           K+LCRV+NV+LKAE DTDEV+AQV L+PE  Q+E AVEK  P   P    P     S  +
Sbjct: 69  KLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPGEGPSARR 128

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           +   +   T              LP  DM++ PPTQEL AKDLH  +WRFRHIFRGQPRR
Sbjct: 129 SPRLTPARTAASLYSAATLMSASLPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRR 188

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ  NVPSSVISS SMHLGV
Sbjct: 189 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGV 248

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           LATAWHA++T +MFTVYYKPRTSPSEFI+PYDQYMES+KNNYS+GMRF+MRFEGEEAPEQ
Sbjct: 249 LATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQ 308

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTI+G E+ DP  W +S WR LKVRWDE STIPRP+RVS WKIEPA +PP +N LP+
Sbjct: 309 RFTGTIIGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPP-VNPLPL 366

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSA--TGFSRVLQGQEFSTLRGNFAERE 451
            R KRPR N  P+SP+S +LT+E ++K++ DP+ A  +  S VLQGQE  TLR N    E
Sbjct: 367 SRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSNLT--E 424

Query: 452 SNESD-TAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           SN+SD TA K ++W PS +  K   ++  +R   +NW+  GR E  + D+ SG  +  D 
Sbjct: 425 SNDSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQLGRRETDFKDVRSGSQSFGD- 483

Query: 511 SHGFSSPFADAVPVR----KSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGD 566
           S GF     D  P R    K+    +G     + P+  +   PSL + ES+ ++     +
Sbjct: 484 SPGFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTV-ESSTQMHTDSKE 542

Query: 567 VNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV-Q 625
           +++    +  YG   D P     R E +  +WL       +F      R + P +++   
Sbjct: 543 LHFWNGQSTVYGNSRDRP--QNFRFEQNSSSWLN-----QSFARPEQPRVIRPHASIAPV 595

Query: 626 DQEAGKSKDCKLFGIPLFS----NHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDH 681
           + E  +    K+FG  + +    N+ +  P+ +    M +   +L+ Q +  ++D   + 
Sbjct: 596 ELEKTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLN-QLQPVQTDCIPEV 654

Query: 682 SKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           S S+          E+EK  Q +Q  +KDV+SKTQ  STRSCTKV
Sbjct: 655 SVSTA-----GTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKV 694


>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
 gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
          Length = 839

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 352/709 (49%), Positives = 445/709 (62%), Gaps = 47/709 (6%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCRV 103
           L+ ELW ACAGPL +VP  GE+VYYFPQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C++
Sbjct: 27  LFVELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPCKL 86

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE-------------PPPPPPPRFHVHS 150
           +N++LKAEPDTDEV+AQ+TLLP+  QDEN                  PP    PR  +HS
Sbjct: 87  MNIELKAEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPR--IHS 144

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQ
Sbjct: 145 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQ 204

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRA+R Q  +PSSVISSHSMH
Sbjct: 205 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMH 264

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           LGVLATAWHAV+TG+MFTVYYKPRTSP+EF+V  D+Y ES+K NYSIGMRFKMRFEGEEA
Sbjct: 265 LGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 324

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            EQRFTGTIVGI  +DP  W DSKWR LKVRWDE S++PRPERVS W+IEPA++P  +N 
Sbjct: 325 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAISPSPVNP 384

Query: 391 LPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAER 450
           LP+ R KR RS++  S  D   ++RE +SK+  + S  +   R L  Q  + L G +   
Sbjct: 385 LPV-RFKRSRSSVNASPSDVPTVSREVASKVMAE-SQQSNLPRALHNQGRTQLTGRY--H 440

Query: 451 ESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           +S++  TA+   +W    + ++ ++ + ++R   E W    R    Y  L S F    D 
Sbjct: 441 DSSDVKTAQDLTMWSSGTEQQRNNIAAQTKR-SLEGWT-QSRTPEGYNQLFSAFQPLKDT 498

Query: 511 SHGFSSPFADAVPVRKSVLD--------QEGKFNLVARPWSLMPSGPSLKMPESNAKVPV 562
            +   +  +     R +  D        Q+   N++   W  MP     +  + N  V  
Sbjct: 499 HNPLCTFPSQISGTRSNTWDTADARYPAQQANHNMLHGTWPFMPHSSGFRTNQQNYLVMP 558

Query: 563 QGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSA 622
           +            ++ G   +  L G+  +     W    +  S+  + A S  + P+  
Sbjct: 559 EAA----------KFTGKSAFTSLQGHGTDQCSTGWFG-HIESSSRTDHASSSSIRPQPL 607

Query: 623 MV-QDQEAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESDQ 677
           ++  D +  K    KLFGIPL S      ++  P V++   +         Q      D 
Sbjct: 608 VIGNDVQKTKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDIVGVDN 667

Query: 678 KSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
            SD SK+ K  D  Q  +  E  +QP    T+++++K Q  STRSC KV
Sbjct: 668 CSDPSKTVKPFDGPQSDSITEN-NQPCPEATQNIQNKVQSSSTRSCKKV 715


>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
          Length = 826

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 367/694 (52%), Positives = 445/694 (64%), Gaps = 61/694 (8%)

Query: 77  QVEASTNQVADQQ-MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA-- 133
           QVEASTNQVA+QQ  P+Y+LP KI C+V+NV+LKAEPDTDEV+AQ+TLLPE  QD N   
Sbjct: 27  QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG 86

Query: 134 --------VEKEP--PPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL--- 180
                   VE+E   PP    R  VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL   
Sbjct: 87  NGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSF 146

Query: 181 ----------------DMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
                           DMS+ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSGWSVFV
Sbjct: 147 FDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 206

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           S+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ N+PSSVISSHSMHLGVLATAWHAV+TG
Sbjct: 207 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTG 266

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           TMFTVYYKPRTSPSEF+VP D Y ES+K N+SIGMRFKM FEGEEA EQRFTGTIVG+ D
Sbjct: 267 TMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGD 326

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNML 404
           +DP  W DSKWR LKVRWDE +++PRP+RVS W+IEPA +P  +N LP PR KR R N+L
Sbjct: 327 SDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVL 386

Query: 405 PSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVW 464
            SSPD S + +E +SK+  + S   G  R    QE   LR  F   +SNE +T++K  +W
Sbjct: 387 ASSPDLSAVNKEVASKVMAN-SQQNGLPRAFHSQENMNLRSRFG--DSNELNTSQKLTMW 443

Query: 465 PPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPV 524
               + EK + VS  R  GS++W+   R +   +++LSGF    D  +  SS F   +  
Sbjct: 444 SSGSNQEK-NNVSVQRELGSQSWMQMRRPDG-SSEILSGFQPLKDTRNPLSS-FPSQISG 500

Query: 525 RKSVL---------DQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRG-N 574
            +S           DQ    N+    WSLMP      + + N    +   D+    R  N
Sbjct: 501 NRSNTWNTINVHYPDQNANHNMYPGTWSLMPPNTGFGVNQQNY---LMTPDITLPQRSLN 557

Query: 575 VRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK- 633
            ++GG G +  L  + ++     WL    P S+ ++++ S  L+    +V D    K+K 
Sbjct: 558 AKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSS--LIKPQPLVIDHNVQKAKG 615

Query: 634 -DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQ 692
             C LFGI L S    PE ++S  +   +  G L Q   A E D+ SD SK+ K  D  Q
Sbjct: 616 SSCMLFGISLDS-PAKPELLISPPSVAFD--GKLQQD--ALEEDECSDPSKTVKPLDGAQ 670

Query: 693 VFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             +  EK  Q     TK+++SK Q GS+RSC KV
Sbjct: 671 HDSAREK-HQSCPDGTKNIQSKQQNGSSRSCKKV 703


>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
          Length = 840

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 366/690 (53%), Positives = 443/690 (64%), Gaps = 62/690 (8%)

Query: 78  VEASTNQVADQQ-MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE---SNQDENA 133
           VEASTNQVA+QQ  P+Y+LP KI C+V+NV+LKAEPDTDEV+AQ+TLLPE    N  ++ 
Sbjct: 49  VEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGNVSKDK 108

Query: 134 VEKEP--PPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL----------- 180
           VE+E   PP    R  VHSFCKTLTASDTSTHGGFSVLRRHADECLPPL           
Sbjct: 109 VEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAM 168

Query: 181 --------DMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAG 232
                   DMS+ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSGWSVFVS+KRLVAG
Sbjct: 169 PLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAG 228

Query: 233 DAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYK 292
           DAFIFLRGENGELRVGVRRAMRQQ N+PSSVISSHSMHLGVLATAWHAV+TGTMFTVYYK
Sbjct: 229 DAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYK 288

Query: 293 PRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRD 352
           PRTSPSEF+VP D Y ES+K N+SIGMRFKM FEGEEA EQRFTGTIVG+ D+DP  W D
Sbjct: 289 PRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWAD 348

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSV 412
           SKWR LKVRWDE +++PRP+RVS W+IEPA +P  +N LP PR KR R N+L SSPD S 
Sbjct: 349 SKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVLASSPDLSA 408

Query: 413 LTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEK 472
           + +E +SK+  + S   G  R    QE   LR  F   +SNE +T++K  +W    + EK
Sbjct: 409 VNKEVASKVMAN-SQQNGLPRAFHSQENMNLRSRFG--DSNELNTSQKLTMWSSGSNQEK 465

Query: 473 IDVVSASRRYGSENWV----PPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKSV 528
            + VS  R  GS++W+    P G  E     +LSGF    D  +  SS F   +   +S 
Sbjct: 466 -NNVSVQRELGSQSWMQMRSPDGSSE-----ILSGFQPLKDTRNPLSS-FPSQISGNRSN 518

Query: 529 L---------DQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRG-NVRYG 578
                     DQ    N+    WSLMP      + + N    +   D+    R  N ++G
Sbjct: 519 TWNTINVHYPDQNANHNMYPGTWSLMPPNTGFGVNQQNY---LMTPDITLPQRSLNAKFG 575

Query: 579 GFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK--DCK 636
           G G +  L  + ++     WL    P S+ ++++ S  L+    +V D    K+K   C 
Sbjct: 576 GNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSS--LIKPQPLVIDHNVQKAKGSSCM 633

Query: 637 LFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNE 696
           LFGI L S    PE ++S  +   +  G L Q   A E D+ SD SK+ K  D  Q  + 
Sbjct: 634 LFGISLDS-PAKPELLISPPSVAFD--GKLQQD--ALEEDECSDPSKTVKPLDGAQHDSA 688

Query: 697 HEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
            EK  Q     TK+++SK Q GS+RSC KV
Sbjct: 689 TEK-HQSCPDGTKNIQSKQQNGSSRSCKKV 717


>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
          Length = 826

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 348/711 (48%), Positives = 439/711 (61%), Gaps = 81/711 (11%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL +VP  GE+VYYFPQGHIEQVEASTN +A+ Q  P+Y+LP KI C+
Sbjct: 27  ALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCK 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP------------PPPPPPRFHVHS 150
           ++N++LKAEPDTDEV+AQ+TLLP+  QDEN   +              PP       +HS
Sbjct: 87  LMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHS 146

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQ 206

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRA+R Q  +PSSVISSHSMH
Sbjct: 207 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMH 266

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           LGVLATAWHAV+TG+MFTVYYKPRTSP+EF+V   +Y ES+K NYSIGMRF+MRFEGEEA
Sbjct: 267 LGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEA 326

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            EQRFTGTIVGI  +DP  W DSKWR LKVRWDE S++PRPERVS W+IEPA++P  +N 
Sbjct: 327 AEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP 386

Query: 391 LPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAER 450
           LP+ R KR RS++  S  D S + RE +SK+ V+ S      R L  Q  + L G +  R
Sbjct: 387 LPV-RFKRSRSSVNASPSDVSTVNREVASKVMVE-SQQNNLPRALHNQGRTQLTGRY--R 442

Query: 451 ESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           +S +  TA+   +W    + ++ ++ + ++R   E W    R    Y  L S F    D 
Sbjct: 443 DSTDVKTAQDLTMWSSGTEQQRNNIAAQTKRC-LEGWT-QSRTPEGYNQLFSAFQPLKD- 499

Query: 511 SHGFSSPFADAVPVRKSVL---------DQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
           +H    PF + +   +S            Q+   N++    S MP     +M + N  V 
Sbjct: 500 AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQNNLVT 559

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH----SREL 617
            +  +          + G   +  L G+  +     W        + E+++H    S  L
Sbjct: 560 PEAAN----------FTGKSAFTSLQGHVTDQCSTGWF------GSIESNSHTDHASSSL 603

Query: 618 MPKSAMVQDQEAGKSKDC--KLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFES 675
           +    +V   +  K+K    KLFGIPL S     EP+VS       P+   D + +   +
Sbjct: 604 IRSQPLVIGNDVQKTKGTSFKLFGIPLGSPE-KSEPLVS------PPSVAYDGKLQTSPT 656

Query: 676 DQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D                        ++P    T+++++K Q  STRSC KV
Sbjct: 657 DN-----------------------NEPCSEATQNIQNKVQSSSTRSCKKV 684


>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
          Length = 830

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 358/710 (50%), Positives = 444/710 (62%), Gaps = 49/710 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C+
Sbjct: 20  ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA-------VEKEPPPPPPPRF--HVHSFCK 153
           ++N++LK EPDTDEV+AQ+TLLP+  QDEN            PP  P      H+HSFCK
Sbjct: 80  LMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCK 139

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRR
Sbjct: 140 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRR 199

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRA+R Q  +PSSVISSH+MHLGV
Sbjct: 200 HLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGV 259

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           LATAWHAV+T +MFTVYYKPRTSP+EF+V  D+Y ES+K NYSIGMRFKMRFEGEEA EQ
Sbjct: 260 LATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQ 319

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+
Sbjct: 320 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 379

Query: 394 PRPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
            R KR RS  N LPS  D S +TRE +SK+  D S     +R L  Q  + L   +   +
Sbjct: 380 -RFKRSRSSVNALPS--DVSTVTREVTSKVMAD-SQQNSLTRALHNQGRTQLTVRY--HD 433

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD-- 509
           +++  T +   VW    + ++ + ++A  +   E W P  R    Y  + S F    D  
Sbjct: 434 NSDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWTPT-RSPEGYNQIFSAFKPLKDIH 491

Query: 510 ------PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
                 PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V 
Sbjct: 492 NPLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVM 549

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
            +G +      G   +    D+     +     H       +  S+  + A S  + P+ 
Sbjct: 550 PEGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQP 598

Query: 622 AMVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESD 676
            ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D
Sbjct: 599 LVLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVD 658

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC KV
Sbjct: 659 NCSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKV 707


>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
          Length = 832

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 358/710 (50%), Positives = 444/710 (62%), Gaps = 49/710 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C+
Sbjct: 22  ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 81

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA-------VEKEPPPPPPPRF--HVHSFCK 153
           ++N++LK EPDTDEV+AQ+TLLP+  QDEN            PP  P      H+HSFCK
Sbjct: 82  LMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCK 141

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRR
Sbjct: 142 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRR 201

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRA+R Q  +PSSVISSH+MHLGV
Sbjct: 202 HLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGV 261

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           LATAWHAV+T +MFTVYYKPRTSP+EF+V  D+Y ES+K NYSIGMRFKMRFEGEEA EQ
Sbjct: 262 LATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQ 321

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+
Sbjct: 322 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 381

Query: 394 PRPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
            R KR RS  N LPS  D S +TRE +SK+  D S     +R L  Q  + L   +   +
Sbjct: 382 -RFKRSRSSVNALPS--DVSTVTREVTSKVMAD-SQQNSLTRALHNQGRTQLTVRY--HD 435

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD-- 509
           +++  T +   VW    + ++ + ++A  +   E W P  R    Y  + S F    D  
Sbjct: 436 NSDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWTPT-RSPEGYNQIFSAFKPLKDIH 493

Query: 510 ------PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
                 PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V 
Sbjct: 494 NPLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVM 551

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
            +G +      G   +    D+     +     H       +  S+  + A S  + P+ 
Sbjct: 552 PEGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQP 600

Query: 622 AMVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESD 676
            ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D
Sbjct: 601 LVLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVD 660

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC KV
Sbjct: 661 NCSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKV 709


>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
 gi|224028731|gb|ACN33441.1| unknown [Zea mays]
 gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
 gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
          Length = 813

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 348/711 (48%), Positives = 439/711 (61%), Gaps = 81/711 (11%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL +VP  GE+VYYFPQGHIEQVEASTN +A+ Q  P+Y+LP KI C+
Sbjct: 27  ALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCK 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP------------PPPPPPRFHVHS 150
           ++N++LKAEPDTDEV+AQ+TLLP+  QDEN   +              PP       +HS
Sbjct: 87  LMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHS 146

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQ 206

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRA+R Q  +PSSVISSHSMH
Sbjct: 207 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMH 266

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           LGVLATAWHAV+TG+MFTVYYKPRTSP+EF+V   +Y ES+K NYSIGMRF+MRFEGEEA
Sbjct: 267 LGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEA 326

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            EQRFTGTIVGI  +DP  W DSKWR LKVRWDE S++PRPERVS W+IEPA++P  +N 
Sbjct: 327 AEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP 386

Query: 391 LPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAER 450
           LP+ R KR RS++  S  D S + RE +SK+ V+ S      R L  Q  + L G +  R
Sbjct: 387 LPV-RFKRSRSSVNASPSDVSTVNREVASKVMVE-SQQNNLPRALHNQGRTQLTGRY--R 442

Query: 451 ESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           +S +  TA+   +W    + ++ ++ + ++R   E W    R    Y  L S F    D 
Sbjct: 443 DSTDVKTAQDLTMWSSGTEQQRNNIAAQTKRC-LEGWT-QSRTPEGYNQLFSAFQPLKD- 499

Query: 511 SHGFSSPFADAVPVRKSVL---------DQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
           +H    PF + +   +S            Q+   N++    S MP     +M + N  V 
Sbjct: 500 AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQNNLVT 559

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH----SREL 617
            +  +          + G   +  L G+  +     W        + E+++H    S  L
Sbjct: 560 PEAAN----------FTGKSAFTSLQGHVTDQCSTGWF------GSIESNSHTDHASSSL 603

Query: 618 MPKSAMVQDQEAGKSKDC--KLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFES 675
           +    +V   +  K+K    KLFGIPL S     EP+VS       P+   D + +   +
Sbjct: 604 IRSQPLVIGNDVQKTKGTSFKLFGIPLGSPE-KSEPLVS------PPSVAYDGKLQTSPT 656

Query: 676 DQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D                        ++P    T+++++K Q  STRSC KV
Sbjct: 657 DN-----------------------NEPCSEATQNIQNKVQSSSTRSCKKV 684


>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 707

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 357/710 (50%), Positives = 443/710 (62%), Gaps = 49/710 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C+
Sbjct: 20  ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA-------VEKEPPPPPPPRF--HVHSFCK 153
           ++N++LK EPDTDEV+AQ+TLLP+  QDEN            PP  P      H+HSFCK
Sbjct: 80  LMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCK 139

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRR
Sbjct: 140 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRR 199

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRA+R Q  +PSSVISSH+MHLGV
Sbjct: 200 HLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGV 259

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           LATAWHAV+T +MFTVYYKPRTSP+EF+V  D+Y ES+K NYSIGMRFKMRFEGEEA EQ
Sbjct: 260 LATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQ 319

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+
Sbjct: 320 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 379

Query: 394 PRPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
            R KR RS  N LPS  D S +TRE +SK+  D S     +R L  Q  + L   +   +
Sbjct: 380 -RFKRSRSSVNALPS--DVSTVTREVTSKVMAD-SQQNSLTRALHNQGRTQLTVRY--HD 433

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD-- 509
           +++  T +   VW    + ++ + ++A  +   E W  P R    Y  + S F    D  
Sbjct: 434 NSDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWT-PTRSPEGYNQIFSAFKPLKDIH 491

Query: 510 ------PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
                 PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V 
Sbjct: 492 NPLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVM 549

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
            +G +      G   +    D+     +     H       +  S+  + A S  + P+ 
Sbjct: 550 PEGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQP 598

Query: 622 AMVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESD 676
            ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D
Sbjct: 599 LVLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVD 658

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC K 
Sbjct: 659 NCSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKA 707


>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
          Length = 813

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 347/711 (48%), Positives = 439/711 (61%), Gaps = 81/711 (11%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL +VP  GE+VYYFPQGHIEQVEASTN +A+ Q  P+Y+LP KI C+
Sbjct: 27  ALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCK 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP------------PPPPPPRFHVHS 150
           ++N++LKAEPDTDEV+AQ+TLLP+  QDEN   +              PP       +HS
Sbjct: 87  LMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHS 146

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL A+DLHG EWRFRHIFRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRGQ 206

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRA+R Q  +PSSVISSHSMH
Sbjct: 207 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMH 266

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           LGVLATAWHAV+TG+MFTVYYKPRTSP+EF+V   +Y ES+K NYSIGMRF+MRFEGEEA
Sbjct: 267 LGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEA 326

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            EQRFTGTIVGI  +DP  W DSKWR LKVRWDE S++PRPERVS W+IEPA++P  +N 
Sbjct: 327 AEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP 386

Query: 391 LPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAER 450
           LP+ R KR RS++  S  D S + RE +SK+ V+ S      R L  Q  + L G +  R
Sbjct: 387 LPV-RFKRSRSSVNASPSDVSTVNREVASKVMVE-SQQNNLPRALHNQGRTQLTGRY--R 442

Query: 451 ESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           +S +  TA+   +W    + ++ ++ + ++R   E W    R    Y  L S F    D 
Sbjct: 443 DSTDVKTAQDLTMWSSGTEQQRNNIAAQTKRC-LEGWT-QSRTPEGYNQLFSAFQPLKD- 499

Query: 511 SHGFSSPFADAVPVRKSVL---------DQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
           +H    PF + +   +S            Q+   N++    S MP     +M + N  V 
Sbjct: 500 AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQNNLVT 559

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH----SREL 617
            +  +          + G   +  L G+  +     W        + E+++H    S  L
Sbjct: 560 PEAAN----------FTGKSAFTSLQGHVTDQCSTGWF------GSIESNSHTDHASSSL 603

Query: 618 MPKSAMVQDQEAGKSKDC--KLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFES 675
           +    +V   +  K+K    KLFGIPL S     EP+VS       P+   D + +   +
Sbjct: 604 IRSQPLVIGNDVQKTKGTSFKLFGIPLGSPE-KSEPLVS------PPSVAYDGKLQTSPT 656

Query: 676 DQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D                        ++P    T+++++K Q  STRSC KV
Sbjct: 657 DN-----------------------NEPCSEATQNIQNKVQSSSTRSCKKV 684


>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
 gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 353/680 (51%), Positives = 429/680 (63%), Gaps = 78/680 (11%)

Query: 56  PLVTVPREGERVYYFPQGHIEQVEASTNQVAD-QQMPVYDLPSKILCRVINVQLKAEPDT 114
           PLVTVPR+GE VYYFPQGHIEQVEASTNQVAD QQMP Y+L  KILCRV+NVQLKAE DT
Sbjct: 4   PLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLSPKILCRVVNVQLKAELDT 63

Query: 115 DEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHAD 174
           DEVFAQV LLPE+ QD   VE+E  PP P R  VHSFCK LTASDTSTHGGFSVL+RHAD
Sbjct: 64  DEVFAQVILLPETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLKRHAD 123

Query: 175 ECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDA 234
           ECLPPLDMS QPP QEL AKDLHGNEWRFRHIFRGQPRRHLLQSGWS+FVS+K+LVAGDA
Sbjct: 124 ECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDA 183

Query: 235 FIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR 294
           FIFLRGE  ELRVGVRRA+RQ   +PSS+ISSHSMH+G+LATAWHAVSTG+MFTVYYKPR
Sbjct: 184 FIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTVYYKPR 243

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSK 354
           TSP+EFI+P D+YMES+K NY+IGMRFKMRFE ++APEQRF+GT++G+E+ADP++W  S 
Sbjct: 244 TSPAEFIIPVDKYMESVKINYAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKKWPRSN 303

Query: 355 WRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLT 414
           WRCLKV WDETS + RP+RVS WK+EPALA P+++ +   R KR R N + SS DSS LT
Sbjct: 304 WRCLKVHWDETSPVHRPDRVSPWKVEPALA-PSMDPVSGCRLKRHRPNTVTSSADSSALT 362

Query: 415 REGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKID 474
           ++ +           G SR +Q QE  TLR     +  N SD        P  L   K  
Sbjct: 363 KKDN-----------GPSRHMQHQEILTLRNTPTGK--NYSDNNHNP---PWVLSQGKDQ 406

Query: 475 VVSASRRYGSENWVPPGRHEPVYTDLLSGFGA---NADPSHGFSSPFADAVPVRKSVLDQ 531
               +RR+  ++ +P   H P   +  +G G    + + S  F   F+D V       DQ
Sbjct: 407 STFDNRRFEPDDRIPYLMHGPKLMNPTTGTGTLLKSYESSRPFFGLFSDDV-------DQ 459

Query: 532 EGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRV 591
                         PS P   M  S+ +V V   D + Q +   R+              
Sbjct: 460 --------------PSHP-FNMLASSMEVQV-AKDKDTQQQHGSRF-------------- 489

Query: 592 EHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQ--DQEAGKSKDCKLFGIPLFSNHVMP 649
                      LP    ++S H     PK    Q  ++   K  + KLFG+ LF N    
Sbjct: 490 -----------LPFPYADSSPHPSRSKPKHLPFQQCNERTAKDDNYKLFGVSLFRNSKAL 538

Query: 650 EPVVSHRNTMNEPAGNLD---QQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQT 706
           EP   HR++ ++P   ++      +   SD+  +  K  K A       E E   Q S  
Sbjct: 539 EPATIHRHSADKPQHQINVASDHLQLLGSDRYLEQLKHPKHAR----CEEQENIFQASSL 594

Query: 707 HTKDVRSKTQCGSTRSCTKV 726
           ++KDV+ K + GS R C KV
Sbjct: 595 YSKDVQGKPEGGSARRCVKV 614


>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 771

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 362/659 (54%), Positives = 437/659 (66%), Gaps = 33/659 (5%)

Query: 90  MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDEN--AVEKEPPPPPPP--- 144
           M +Y+LP KILC V+NV+LKAEPDTDEV+AQ+TLLPES Q E+  + E+E P  P     
Sbjct: 1   MQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHV 60

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
           R  VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFR
Sbjct: 61  RPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFR 120

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HIFRGQPRRHLLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQQ NVPSSVI
Sbjct: 121 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVI 180

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
           SSHSMHLGVLATAWHAV+TGTMFTVYYKPRTSP+EF+VPYD+YMES+K NYSIGMRFKMR
Sbjct: 181 SSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMR 240

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FEGEEAPEQRFTGTIVG+ D+DP  W +SKWR LKVRWDE S+IPRPERVS W+IEPA++
Sbjct: 241 FEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVS 300

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
           PP +N LP+PR KR R N      DSS + +E ++K+ V+ S   G  R  Q QE +T +
Sbjct: 301 PPPVNPLPVPRTKRLRPNATALPADSSAIAKEAATKVVVE-SEPNGTQRTFQTQENATPK 359

Query: 445 GNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF 504
             F    S+E ++A+KS++ P   D EK +      + GS+  +   + E  Y+++LSGF
Sbjct: 360 SGFG--NSSELESAQKSIMRPSGFDREK-NNTPIQWKLGSDGRMQMSKPES-YSEMLSGF 415

Query: 505 GANADPS--HGFSSPFADAVP--------VRKSVLDQEGKFNLVARPWSLMPSGPSLKMP 554
               D     GF S               V     DQ+   N+    WS MP    L + 
Sbjct: 416 QPPKDVQIPQGFCSLPEQITAGHSNFWHTVNAQYQDQQSNHNMFPSSWSFMPPNTRLGLN 475

Query: 555 ESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHS 614
           + N  + +Q   V  Q  GN ++G  G Y  L G   E   G W    +P S+ +++   
Sbjct: 476 KQNYSM-IQEAGVLSQRPGNTKFGN-GVYAALPGRGTEQYSGGWFGHMMPNSHMDDT-QP 532

Query: 615 RELMPKSAMVQ--DQEAGKSKDCKLFGIPLFSNHVMPEPV-----VSHRNTMNEPAGNLD 667
           R + PK  +V   D +  K   CKLFGI L S     EP+     V +  T   P     
Sbjct: 533 RLIKPKPLVVAHGDVQKAKGASCKLFGIHLDSP-AKSEPLKSPSSVVYDGTPQTPGATEW 591

Query: 668 QQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           ++    E ++ SD SK+ K  D  Q  +  EKPS  SQ  ++++  K+Q  STRSC KV
Sbjct: 592 RRPDVTEVEKCSDPSKAMKPLDTPQPDSVPEKPS--SQQASRNMSCKSQGVSTRSCKKV 648


>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
 gi|223975541|gb|ACN31958.1| unknown [Zea mays]
          Length = 766

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 351/653 (53%), Positives = 426/653 (65%), Gaps = 31/653 (4%)

Query: 90  MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP---RF 146
           M  YDLP KILC V+NV+LKAEPD DEV+AQ+TLLPES  +EN   +E P  PP    R 
Sbjct: 1   MQFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARP 60

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
            VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM+RQPPTQEL AKDLHG EWRFRHI
Sbjct: 61  RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHI 120

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           FRGQPRRHLLQSGWSVFVS+KRLVAGDAFIFLRG++GELRVGVRRAMRQQ NVPSSVISS
Sbjct: 121 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISS 180

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFE 326
           HSMHLGVLATAWHAV+TGTMFTVYYKPRTSP+EF+VP D+YMES+K NY IGMRFKMRFE
Sbjct: 181 HSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFE 240

Query: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
           GEEAPEQRFTGTIVG  D D   W +SKWR LKVRWDE S+IPRPERVS W+IEPA++PP
Sbjct: 241 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 300

Query: 387 ALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGN 446
            +N LP+ RPKRPRSN + S P+SS  T+E + K+ ++ +      R LQ Q+    +  
Sbjct: 301 PINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE-TQQHALQRPLQTQDNVAPKSV 359

Query: 447 FAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGF-- 504
           F   +++E D+A KS + P   D +K   +   R+ GS+ W+   R +  Y+++LSG+  
Sbjct: 360 FG--DNSELDSAHKSSLRPSGFDLDK-STIGMQRKLGSDIWMRMNRPD-GYSEMLSGYQP 415

Query: 505 -GANADPSHGFSS---PFADAVP-----VRKSVLDQEGKFNLVARPWSLMPSGPSLKMPE 555
               A  S GF S     A   P     V     DQ+G  NL    WS+MPS     M  
Sbjct: 416 PNEGARNSQGFCSLPDQIAAGRPNFWHTVNAHYQDQQGNHNLFPGSWSMMPSSTGFGMNR 475

Query: 556 SNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSR 615
            +  +  + G ++ Q   N ++G  G Y  L G  ++     W     P    ++ A  R
Sbjct: 476 QSYPMIQEVGGMS-QSCTNTKFGN-GVYAALPGRGIDRYPSGWFGHTTPGGRVDD-AQPR 532

Query: 616 ELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAF 673
            + P+  ++   EA K K   CKLFGI L S     EP+ S  +     A          
Sbjct: 533 VIKPQPLVLAHGEALKMKGNSCKLFGIHLDSP-AKSEPLKSPPSVATPAAEKW--MADGI 589

Query: 674 ESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           ++D+  +  K+ K     QV    E+  Q S    +  + K+Q GSTRSC KV
Sbjct: 590 DADKSPEPHKTPKQLGATQVDPVPERCPQAS----RGTQCKSQGGSTRSCKKV 638


>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
 gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
          Length = 376

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 295/377 (78%), Positives = 329/377 (87%), Gaps = 2/377 (0%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD-QQMPVYDLPSKIL 100
           E ALY ELWHACAGPLVTVPR+GE VYYFPQGHIEQVEASTNQVAD QQMP Y+LP KIL
Sbjct: 1   EDALYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLPPKIL 60

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDT 160
           CRV+NVQLKAE DTDEVFAQV LLP + QD + VEKE  PPPP R  VHSFCK LTASDT
Sbjct: 61  CRVVNVQLKAELDTDEVFAQVILLPVAEQDVDLVEKEDLPPPPARPRVHSFCKMLTASDT 120

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           STHGGFSVLRRHADECLPPLDMS QPP QEL AKDLHGNEWRFRHIFRGQPRRHLLQSGW
Sbjct: 121 STHGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGW 180

Query: 221 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 280
           S+FVS+K+LVAGDAFIFLRGE  ELRVGVRRA+ Q  NVPSSV+SSHSMH+G+LAT WHA
Sbjct: 181 SLFVSAKKLVAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHIGILATVWHA 240

Query: 281 VSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIV 340
           VSTG+MFTVYYKPRTSP+EFI+P D+Y ES+K NY+IGMRFKM+FE EEAPEQRF+GT++
Sbjct: 241 VSTGSMFTVYYKPRTSPAEFIIPIDKYRESVKINYAIGMRFKMKFEAEEAPEQRFSGTVI 300

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           G+E+ADP++W  SKWRCLKVRWDETS + RP+RVS WKIE ALA P+L+ +P  + KR R
Sbjct: 301 GVEEADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIERALA-PSLDPVPGCQSKRHR 359

Query: 401 SNMLPSSPDSSVLTREG 417
           SNM  SS DSS  T++G
Sbjct: 360 SNMATSSADSSAPTKKG 376


>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
          Length = 326

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 282/333 (84%), Positives = 298/333 (89%), Gaps = 11/333 (3%)

Query: 4   AASSSEVSMKSCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPRE 63
           A +SSE+S+KS NET + PME     +           E ALY ELWHACAGPLVTVPR+
Sbjct: 3   ATASSELSIKSSNETSKSPMEEDKDLNL----------ETALYKELWHACAGPLVTVPRQ 52

Query: 64  GERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTL 123
           GERVYYFPQGHIEQVEASTNQ ADQQMP+YDL SKILCRVINVQLKA+PDTDEVFAQ+TL
Sbjct: 53  GERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKILCRVINVQLKAKPDTDEVFAQITL 112

Query: 124 LPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS 183
           LPE NQDENAVEKEPPPP  PRFHVHSFCKTLTASDTSTHGGFSVLRRHA+ECLP LDMS
Sbjct: 113 LPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHGGFSVLRRHAEECLPVLDMS 172

Query: 184 RQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENG 243
           +QPPTQ+L AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR E  
Sbjct: 173 QQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRCEK- 231

Query: 244 ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
           ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR SP+EFIVP
Sbjct: 232 ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRISPAEFIVP 291

Query: 304 YDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           +DQYMES+K+NYSIGMRFKMRFEGEEAPEQR  
Sbjct: 292 FDQYMESVKSNYSIGMRFKMRFEGEEAPEQRLV 324


>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
 gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
          Length = 671

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 270/386 (69%), Positives = 318/386 (82%), Gaps = 1/386 (0%)

Query: 28  SNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD 87
           SN  ++   R G    ALY ELWHACAGPLVT+PREGERVYYFPQGH+EQ+EAS NQ  +
Sbjct: 3   SNHMSAVTSRAGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLE 62

Query: 88  QQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH 147
           QQMP ++LPSKILC+V+N+ L+AEP+TDEV+AQ+TLLPE++Q E     + P P PPR  
Sbjct: 63  QQMPSFNLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSE-VTSPDDPLPEPPRCT 121

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
           VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QEL A DLHGNEW FRHIF
Sbjct: 122 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIF 181

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RGQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSSVISSH
Sbjct: 182 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSH 241

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEG 327
           SMHLGVLATA HA+STGT+F+V+YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEG
Sbjct: 242 SMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEG 301

Query: 328 EEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPA 387
           +E PE+RF+GTIVG+ED     W DS+WR LKV+WDE S+I RP+RVS W++EP ++ P 
Sbjct: 302 DEVPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPP 361

Query: 388 LNSLPMPRPKRPRSNMLPSSPDSSVL 413
            NS P  R KR R  +LPS+   S L
Sbjct: 362 ANSQPTQRNKRSRPPILPSTMTDSSL 387


>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
          Length = 684

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 280/394 (71%), Positives = 322/394 (81%), Gaps = 5/394 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLVTVPREGERVYYFPQGH+EQ+EASTNQ ADQQMP++ LP+KILCRV
Sbjct: 21  ALYQELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQQMPLFSLPAKILCRV 80

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           ++VQL+AEP+TDEV+AQ+TLLPE  Q E     +PP P PPR  VHSFCKTLTASDTSTH
Sbjct: 81  VHVQLRAEPETDEVYAQITLLPEPEQGE-ITSPDPPIPEPPRCTVHSFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHADECLP LDMS+ PP QEL A DLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 140 GGFSVLRRHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 200 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQPSNMPSSVISSHSMHLGVLATASHAIST 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFI+  ++Y+E+  +  S+GMRFKMRFEGE+APE+RF+GTI+G+ 
Sbjct: 260 GTLFSVFYKPRTSQSEFIISLNKYLEAKNHKLSVGMRFKMRFEGEDAPERRFSGTIIGVG 319

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR-SN 402
           DA   RW DS+WR LKV+WDE S+IPRP RVS W++EP +A       P PR KR R   
Sbjct: 320 DAVSSRWADSEWRSLKVQWDEPSSIPRPVRVSPWELEPLVAAVPSAPQPTPRSKRARPPA 379

Query: 403 MLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQ 436
           +LPS+PD    +R    K ++D  SA   S  LQ
Sbjct: 380 LLPSTPDIPACSRW---KSHIDAGSAFSHSSGLQ 410


>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
          Length = 362

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 268/341 (78%), Positives = 294/341 (86%), Gaps = 7/341 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCRV 103
           L+ ELW ACAGPL  VP  GERV+YFPQGHIEQVEASTNQVA+QQ  P+Y+LP KI C+V
Sbjct: 22  LFVELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKV 81

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE------PPPPPPPRFHVHSFCKTLTA 157
           +NV+LKAE DTDEV+AQ+TLLPE  QDEN  ++E       PP    R  VHSFCKTLTA
Sbjct: 82  MNVELKAEQDTDEVYAQLTLLPEKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKTLTA 141

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHADECLPPLDMS+ PPTQEL AKDLHG EW FRHIFRGQPRRHLLQ
Sbjct: 142 SDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRHLLQ 201

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           SGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRAMRQ+ N+PSSVISSHSMHLGVLATA
Sbjct: 202 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHSMHLGVLATA 261

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
           WH  +TGTMFTVYYKPRTSP+EF+VP D + ES+K N+SIGMRFKMRFEGEEA EQRFTG
Sbjct: 262 WHVANTGTMFTVYYKPRTSPAEFVVPRDWFDESLKRNHSIGMRFKMRFEGEEAAEQRFTG 321

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWK 378
           TIVGI D+DP  W DSKWR LKVRWDE S++PRPERVS W+
Sbjct: 322 TIVGIGDSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362


>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 265/370 (71%), Positives = 312/370 (84%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLVT+PREGERVYYFPQGH+EQ+EAS NQ  +QQMP ++LPSKILC+V
Sbjct: 12  ALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKV 71

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AEP+TDEV+AQ+TLLPE++Q E     + P P  PR  VHSFCKTLTASDTSTH
Sbjct: 72  VNVHLRAEPETDEVYAQITLLPEADQSE-VTSPDDPLPESPRCTVHSFCKTLTASDTSTH 130

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDM++QPP QEL A DLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 131 GGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 190

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSSVISSHSMHLGVLATA HA++T
Sbjct: 191 VSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAIAT 250

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEG+E PE+RF+GTIVG+ 
Sbjct: 251 GTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVG 310

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D     W DS+WR LKV+WDE S+I RP+RVS W++EP ++ P  N  P  R KR R  +
Sbjct: 311 DNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPTNPQPSQRNKRSRPPI 370

Query: 404 LPSS-PDSSV 412
           LPS+ PDSS+
Sbjct: 371 LPSTMPDSSL 380


>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
 gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 269/378 (71%), Positives = 310/378 (82%), Gaps = 1/378 (0%)

Query: 29  NSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           N T+ G    G    ALY ELWHACAGPLVT+P EGERVYYFPQGH+EQ+EAS +Q  +Q
Sbjct: 2   NHTSGGNPHPGGCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQ 61

Query: 89  QMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV 148
           QMP ++LPSKILC+V+NVQ +AEP+TDEV+AQ+TLLPE +Q E     +PP P P R  V
Sbjct: 62  QMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSE-VTSPDPPLPEPERCTV 120

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           HSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLHGNEW FRHIFR
Sbjct: 121 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFR 180

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSSVISS S
Sbjct: 181 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQS 240

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           MHLGVLATA HA++TGT+F+V+YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEGE
Sbjct: 241 MHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVNLNKYIEAQNHKLSVGMRFKMRFEGE 300

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           E PE+RF+GTIVG+ D     W DS+WR LKV WDE S+I RPERVS W +EP +A    
Sbjct: 301 EVPERRFSGTIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVATTPS 360

Query: 389 NSLPMPRPKRPRSNMLPS 406
           NS PM R KRPR ++LPS
Sbjct: 361 NSQPMQRNKRPRPSVLPS 378


>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
           [Medicago truncatula]
          Length = 670

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 267/383 (69%), Positives = 314/383 (81%), Gaps = 5/383 (1%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           +   G    ALY ELWHACAGPLVT+PREGERVYYFPQGH+EQ+EAS NQ  +QQMP ++
Sbjct: 5   ITFTGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFN 64

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKT 154
           LPSKILC+V+N+ L+AEP+TDEV+AQ+TLLPE++Q E     + P P PPR  VHSFCKT
Sbjct: 65  LPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSE-VTSPDDPLPEPPRCTVHSFCKT 123

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QEL A DLHGNEW FRHIFRGQPRRH
Sbjct: 124 LTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRH 183

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLR----GENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           LL +GWSVFVSSK+LVAGDAFIFLR    GENGELRVGVRR MRQQ N+PSSVISSHSMH
Sbjct: 184 LLTTGWSVFVSSKKLVAGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSVISSHSMH 243

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           LGVLATA HA+STGT+F+V+YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEG+E 
Sbjct: 244 LGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEV 303

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
           PE+RF+GTIVG+ED     W DS+WR LKV+WDE S+I RP+RVS W++EP ++ P  NS
Sbjct: 304 PERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANS 363

Query: 391 LPMPRPKRPRSNMLPSSPDSSVL 413
            P  R KR R  +LPS+   S L
Sbjct: 364 QPTQRNKRSRPPILPSTMTDSSL 386


>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 262/364 (71%), Positives = 308/364 (84%), Gaps = 1/364 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLVT+PREGERVYYFPQGH+EQ+EAS NQ  +QQMP ++LPSKILC+V
Sbjct: 12  ALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKV 71

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AEP+TDEV+AQ+TLLPE++Q E     + P P  PR  VHSFCKTLTASDTSTH
Sbjct: 72  VNVHLRAEPETDEVYAQITLLPEADQSE-VTSPDDPLPESPRCTVHSFCKTLTASDTSTH 130

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDM++QPP QEL A DLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 131 GGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 190

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA++T
Sbjct: 191 VSSKKLVAGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVISSHSMHLGVLATASHAIAT 250

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEG+E PE+RF+GTIVG+E
Sbjct: 251 GTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVE 310

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D     W DS+WR LKV+WDE S+I RP+RVS W++EP ++ P  NS P  R KR R  +
Sbjct: 311 DNKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSNPPTNSQPSQRNKRSRPPI 370

Query: 404 LPSS 407
           LPS+
Sbjct: 371 LPST 374


>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
          Length = 645

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 270/394 (68%), Positives = 314/394 (79%), Gaps = 3/394 (0%)

Query: 37  RVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP 96
           ++G    ALY ELWHACAGPLV VPRE ERVYYFPQGH+EQ+EAS +Q  DQ+MP ++LP
Sbjct: 14  KLGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLP 73

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
           SKILC+V+NV L+AEP+TDEV+AQVTLLPE +Q E     +PP P P    VHSFCKTLT
Sbjct: 74  SKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSE-ITSPDPPLPEPQSCTVHSFCKTLT 132

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHGNEW FRHIFRGQPRRHLL
Sbjct: 133 ASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLL 192

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFVSSKRL AGDAFIFLRGENGELRVGVRR MRQ  NVP SVISSHSMHLGVLAT
Sbjct: 193 TTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLAT 252

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           A HA++TGT+F+V+YKPR SPSEFIV  ++Y+E+  +  S+GMRFKMRFEG+EAPE+RF+
Sbjct: 253 ASHAITTGTLFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFS 312

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTIVG+ D     W DS+WR LKV+WDE S+I RPERVS W++EP +    L + PM R 
Sbjct: 313 GTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQRS 372

Query: 397 KRPRSNML--PSSPDSSVLTREGSSKLNVDPSSA 428
           KRPRS +L  P+   S+   +  S    V+ SS 
Sbjct: 373 KRPRSPVLSSPTPGLSAFAVKTNSHSFTVNYSST 406


>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
 gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/385 (71%), Positives = 319/385 (82%), Gaps = 5/385 (1%)

Query: 33  SGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST-NQVADQQMP 91
           SG    G P  ALY ELWHACAGPLVTVPREGERVYYFPQGH+EQ+EAST +Q  DQQMP
Sbjct: 10  SGGPHAGAPCDALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTTHQGLDQQMP 69

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSF 151
            ++LPSKILC+V++VQL+AEP+TDEV+AQVTLLPE +Q E     +PP P P R  VHSF
Sbjct: 70  SFNLPSKILCKVVHVQLRAEPETDEVYAQVTLLPEPDQSE-ITSPDPPLPEPQRCTVHSF 128

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLHGNEW FRHIFRGQP
Sbjct: 129 CKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFRGQP 188

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLL +GWSVFVSSK+LVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHL
Sbjct: 189 RRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSNMPSSVISSHSMHL 248

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           GVLATA HA+STGT+F+V+YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEGEE P
Sbjct: 249 GVLATASHAISTGTLFSVFYKPRTSRSEFIVSLNKYLEARNHKLSVGMRFKMRFEGEEVP 308

Query: 332 EQRFTGTIVGIEDADPQR-WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
           E+RF+GTIVG+ D +    W DS+WR LKV+WDE ++I RPERVS W++EP +A  A  +
Sbjct: 309 ERRFSGTIVGVGDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAWELEPLVAAAAPTN 368

Query: 391 L-PMPRPKRPRSNMLPS-SPDSSVL 413
           L P  R KR R  +LPS +PD SVL
Sbjct: 369 LQPAQRNKRARPPVLPSATPDLSVL 393


>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
          Length = 643

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 270/394 (68%), Positives = 314/394 (79%), Gaps = 3/394 (0%)

Query: 37  RVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP 96
           ++G    ALY ELWHACAGPLV VPRE ERVYYFPQGH+EQ+EAS +Q  DQ+MP ++LP
Sbjct: 12  KLGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLP 71

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
           SKILC+V+NV L+AEP+TDEV+AQVTLLPE +Q E     +PP P P    VHSFCKTLT
Sbjct: 72  SKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSE-ITSPDPPLPEPQSCTVHSFCKTLT 130

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHGNEW FRHIFRGQPRRHLL
Sbjct: 131 ASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLL 190

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFVSSKRL AGDAFIFLRGENGELRVGVRR MRQ  NVP SVISSHSMHLGVLAT
Sbjct: 191 TTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLAT 250

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           A HA++TGT+F+V+YKPR SPSEFIV  ++Y+E+  +  S+GMRFKMRFEG+EAPE+RF+
Sbjct: 251 ASHAITTGTLFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFS 310

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTIVG+ D     W DS+WR LKV+WDE S+I RPERVS W++EP +    L + PM R 
Sbjct: 311 GTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQRS 370

Query: 397 KRPRSNML--PSSPDSSVLTREGSSKLNVDPSSA 428
           KRPRS +L  P+   S+   +  S    V+ SS 
Sbjct: 371 KRPRSPVLSSPTPGLSAFAVKTNSHSFTVNYSST 404


>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
 gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 289/474 (60%), Positives = 340/474 (71%), Gaps = 25/474 (5%)

Query: 29  NSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           N T+ G    G    ALY ELWHACAGPLVT+PREGE VYYFPQGH+EQ+EAS +Q  + 
Sbjct: 7   NHTSGGNPHAGGCNDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMHQGMEP 66

Query: 89  QMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV 148
           QMP+++LPSKILC+V+NVQ +AEP+TDEV+AQ+TLLPE +Q E     +PP P P R  V
Sbjct: 67  QMPLFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSE-VTSPDPPLPEPERCTV 125

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           HSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLHGNEW FRHIFR
Sbjct: 126 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFR 185

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQPRRHLL +GWSVFVSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSSVISS S
Sbjct: 186 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQS 245

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           MHLGVLATA HA++TGT+F+V+YKPRTS SEFIV  ++Y+E   +  S+GMRFKMRFEGE
Sbjct: 246 MHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLEVRNHKLSVGMRFKMRFEGE 305

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           E PE+RF+GTIVG+ D     W DS WR LKV+WDE S+I RPERVS W++EP +A    
Sbjct: 306 EVPERRFSGTIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVATTPS 365

Query: 389 NSLPMPRPKRPRSNMLPS------------SPDSSVLTREGSSKLNVDPSSATGFSRVLQ 436
           NS P+ R KR R  ++PS            SP  S     G S+   D  S+  FS   +
Sbjct: 366 NSQPVQRNKRARPYVIPSPTADLSALGMWKSPVESSALSYGDSQRGRDLYSSPNFSTTAK 425

Query: 437 GQEFSTLRGNFAERESNESDTAEKSVVWP---PSLDDEKIDVV---SASRRYGS 484
                  RGN     S  +  +  S+ WP    S+ D    VV   S  RR G+
Sbjct: 426 VNSLG-FRGN-----SQVASVSHNSMHWPNRVESVTDSFAPVVNKDSGERRQGT 473


>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 674

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/474 (59%), Positives = 347/474 (73%), Gaps = 19/474 (4%)

Query: 28  SNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD 87
           +++  SG    G     LY ELWHACAGPLVT+PREGERVYYFPQGH+EQ+EAS  +  +
Sbjct: 2   ASTLKSGGIHTGAINDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLE 61

Query: 88  QQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH 147
           QQMP ++LPSKILC+V+NV L+AEP+TDEV+AQ+TLLPE++Q E     + P P  PR  
Sbjct: 62  QQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSE-VTSPDDPLPESPRVK 120

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
           +HSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLHGNEW FRHIF
Sbjct: 121 IHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIF 180

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RGQP+RHLL +GWSVFVSSK+L AGDAFIFLRGENGELRVGVRR MRQQ NVPSSVISSH
Sbjct: 181 RGQPKRHLLTTGWSVFVSSKKLAAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSH 240

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEG 327
           SMHLGVLATA HA++TGT+F+V+YKPRTS SEFIV  ++Y+E   +  S+GMRFKMRFEG
Sbjct: 241 SMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEVQSHKLSVGMRFKMRFEG 300

Query: 328 EEAPEQRFTGTIVGIEDADPQR-WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
           +E PE+RF+GTIVG+ D      W DS+WR LKV+WDE S+I RP+RVS W++EP ++  
Sbjct: 301 DEIPERRFSGTIVGVGDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTT 360

Query: 387 ALNSLPMPRPKRPRSNMLPSS-PDSSVL-----TREGSSKLNVDPSSATGFSRVLQGQEF 440
             NS P  R KR R  +LPS+ PDSS+      + E +S    DP    G   +    +F
Sbjct: 361 LANSQPTQRNKRARPLILPSTMPDSSLQGIWKSSVESTSFSYCDPQQGRG---LYPSPKF 417

Query: 441 STLRGNFAERESNES--DTAEKSVVWPPSLDD--EKIDVV----SASRRYGSEN 486
           ++   NF     N S    + KS+ W   +++  E I  +    +  +R G+ N
Sbjct: 418 NSSATNFIGFSGNSSVGSPSNKSIYWSNRMENNLESISAIALKEAGEKRQGTGN 471


>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
 gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
          Length = 671

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 264/370 (71%), Positives = 309/370 (83%), Gaps = 1/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLV +PREGERVYYFPQGH+EQ+EAS +Q  + QMP +DLPSKILC+V
Sbjct: 14  ALYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEPQMPSFDLPSKILCKV 73

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NVQ KAEP+TDEV+AQ+TLLP+ +Q E     + P P P R  VHSFCKTLTASDTSTH
Sbjct: 74  VNVQRKAEPETDEVYAQITLLPDPDQSE-VTSPDTPLPEPERCTVHSFCKTLTASDTSTH 132

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLHGN+W FRHIFRGQPRRHLL +GWSVF
Sbjct: 133 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVF 192

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGENGELRVGVRR MRQQ N+PSSVISS SMHLGVLATA HA++T
Sbjct: 193 VSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATASHAIAT 252

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEGEE PE+RF+GTIVG+ 
Sbjct: 253 GTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVG 312

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D     W DS+WR LKV+WDE S+I RP+RVS W++EP +A    NS P+ R KR R ++
Sbjct: 313 DNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVATTPSNSQPVQRNKRARPSV 372

Query: 404 LPSSPDSSVL 413
           LPS+PD S L
Sbjct: 373 LPSTPDISSL 382


>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
          Length = 739

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 263/371 (70%), Positives = 313/371 (84%), Gaps = 2/371 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLVT+PR+ ERVYYFPQGH+EQ+EAS +Q  +QQMP ++LPSKILC+V
Sbjct: 83  ALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 142

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AE DTDEV+AQ+TLLPESNQ+E     +PP P P R +VHSFCKTLTASDTSTH
Sbjct: 143 VNVVLRAESDTDEVYAQITLLPESNQNE-VTSPDPPLPEPTRCNVHSFCKTLTASDTSTH 201

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLHGN+W FRHIFRGQPRRHLL +GWSVF
Sbjct: 202 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVF 261

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 262 VSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 321

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS S F+V  ++Y+E+  +  S+GMRFKMRFEGEE PE+ F+GTIVG+ 
Sbjct: 322 GTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLG 381

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D     W +S+WR LKV+WDE S+I RP++VS W++EP +A   L++ P  R KRPR  +
Sbjct: 382 DNASPGWANSEWRSLKVQWDEPSSILRPDKVSAWELEPLVASNPLSTQPTQRNKRPRPTV 441

Query: 404 LP-SSPDSSVL 413
           LP SSPD++VL
Sbjct: 442 LPSSSPDATVL 452


>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
          Length = 640

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 273/402 (67%), Positives = 317/402 (78%), Gaps = 7/402 (1%)

Query: 29  NSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           NS+ S +  VG    ALY ELWHACAGPLV VPRE ERVYYFPQGH+EQ+EAS +Q  DQ
Sbjct: 5   NSSYSSL--VGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQ 62

Query: 89  QMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV 148
           +MP ++LPSKILC+V+NV L+AEP+TDEV+AQVTLLPE +Q E     +PP P P    V
Sbjct: 63  KMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSE-ITSPDPPLPEPQSCTV 121

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHGNEW FRHIFR
Sbjct: 122 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFR 181

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQPRRHLL +GWSVFVSSKRL AGDAFIFLRGENGELRVGVRR MRQ  NVP SVISSHS
Sbjct: 182 GQPRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHS 241

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           MHLGVLATA HA++TGT+F+V+YKP  SPSEFIV  ++Y+E+  +  S+GMRFKMRFEG+
Sbjct: 242 MHLGVLATASHAITTGTLFSVFYKP--SPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGD 299

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           EAPE+RF+GTIVG+ D     W DS+WR LKV+WDE S+I RPERVS W++EP +    L
Sbjct: 300 EAPERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPL 359

Query: 389 NSLPMPRPKRPRSNML--PSSPDSSVLTREGSSKLNVDPSSA 428
            + PM R KRPRS +L  P+   S+   +  S    V+ SS 
Sbjct: 360 TAQPMQRSKRPRSPVLSSPTPGLSAFAVKTNSHSFTVNYSST 401


>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
 gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
          Length = 654

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 260/363 (71%), Positives = 304/363 (83%), Gaps = 1/363 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLVTVPREGERVYYFPQGH+EQ+EAST+Q  DQ +P ++LP+KILC+V
Sbjct: 22  ALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGVDQHLPSFNLPAKILCKV 81

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NVQL+AE +TDEV+AQ+TLLPE +Q E     +PP P P +  VHSFCKTLTASDTSTH
Sbjct: 82  MNVQLRAESETDEVYAQITLLPEPDQGE-ITSPDPPLPEPEKCTVHSFCKTLTASDTSTH 140

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHADECLPPLDMS+QPP QEL A DLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 141 GGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+K+LVAGDAFIFLRG++GELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ T
Sbjct: 201 VSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIMT 260

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEGEE PE+RF+GTIVG+ 
Sbjct: 261 GTLFSVFYKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVG 320

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D    RW DS+WR LKV WDE S+I RP+RVS W +EP +A    N+ P  R KR R ++
Sbjct: 321 DNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLVAATPTNTQPPQRNKRARPSV 380

Query: 404 LPS 406
           LPS
Sbjct: 381 LPS 383


>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 665

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 273/408 (66%), Positives = 325/408 (79%), Gaps = 6/408 (1%)

Query: 30  STTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           +T S VK  G    AL TELWHACAGPLVT+PREGERVYYFP+GH+EQ+EAS +Q  +QQ
Sbjct: 4   TTHSSVKPGGVLSDALCTELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQ 63

Query: 90  MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH 149
           MP ++LPSKILC+VIN+Q +AEP+TDEV+AQ+TLLPE +Q+E     + P   P +  VH
Sbjct: 64  MPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQNE-PTSPDAPVQEPEKCTVH 122

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH NEW FRHIFRG
Sbjct: 123 SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRG 182

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSM
Sbjct: 183 QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSM 242

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
           H+GVLATA HA++TGT+F+V+YKPRTS SEFIV  ++Y+E+     S+GMRFKMRFEGEE
Sbjct: 243 HIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEE 302

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           APE+RF+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPS 362

Query: 390 SLPMP--RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFS 432
           S P P  R KRPR   LPS  +  S+ +T +G  K   D PSS   FS
Sbjct: 363 SQPQPPQRNKRPRPPGLPSPTTGPSAPVTPDGVWKSPADTPSSVPLFS 410


>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
          Length = 665

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/395 (67%), Positives = 319/395 (80%), Gaps = 9/395 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL  ELWHACAGPLVT+PREGERVYYFP+GH+EQ+EAS +Q  +QQMP ++LPSKILC+V
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           IN+Q +AEP+TDEV+AQ+TLLPE++Q E  +  + P   P +  VHSFCKTLTASDTSTH
Sbjct: 78  INIQRRAEPETDEVYAQITLLPEADQSE-PMSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH NEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSVF 196

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMH+GVLATA HA++T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+     ++GMRFKMRFEGEEAPE+RF+GTIVG++
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEEAPEKRFSGTIVGVQ 316

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA---PPALNSLPMPRPKRPR 400
           +     W DS+WR LKV+WDE S++ RPERVS W++EP +A   P A   LP  R KRPR
Sbjct: 317 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPSA--HLPPQRNKRPR 374

Query: 401 SNML--PSSPDSSVLTREGSSKLNVD-PSSATGFS 432
              L  P++  S+ +T +G  K   D PSS   FS
Sbjct: 375 PPGLLSPTTAPSTPVTADGVWKSPADNPSSVPLFS 409


>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
          Length = 681

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 264/375 (70%), Positives = 314/375 (83%), Gaps = 6/375 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLV++PREGERVYYFPQGH+EQ+EAS +Q  +QQMP ++LPSKILC+V
Sbjct: 26  ALYRELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 85

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NVQ +AEP+TDEV+AQ+TLLPE + +E     +PPPP P +  VHSFCKTLTASDTSTH
Sbjct: 86  VNVQRRAEPETDEVYAQITLLPEPDPNE-VTSPDPPPPEPEKCTVHSFCKTLTASDTSTH 144

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 145 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 204

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGE GELRVGVRR MRQQ N+PSSVISSHSMHLGVLATA HA++T
Sbjct: 205 VSSKKLVAGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHLGVLATASHAIAT 264

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+++YKPRTS SEFIV  ++Y+E+ K+  S+GMRFKMRFEGEE P++ F+G IVG+E
Sbjct: 265 GTLFSIFYKPRTSRSEFIVSVNKYLEARKHKLSVGMRFKMRFEGEEVPDEGFSGIIVGVE 324

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA----PPALNSLPMPRPKRP 399
           D     W +S+WR LKV+WDE S+I RP+RVS W++EP +A    PP  NS P  R KR 
Sbjct: 325 DNKTSAWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPPNSQPAQRNKRA 384

Query: 400 RSNMLPS-SPDSSVL 413
           R  +LP+ +PD SVL
Sbjct: 385 RPPVLPTPAPDLSVL 399


>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 660

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 256/365 (70%), Positives = 303/365 (83%), Gaps = 3/365 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL  ELWHACAGPLVT+PREGERVYYFP+GH+EQ+EAS +Q  +QQMP ++LPSKILC+V
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           IN+Q +AEP+TDEV+AQ+TLLPE +Q E     + P   P +  VHSFCKTLTASDTSTH
Sbjct: 78  INIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMH+GVLATA HA++T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+     S+GMRFKMRFEGEEAPE+RF+GTIVG++
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 316

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP--RPKRPRS 401
           +     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P  R KRPR 
Sbjct: 317 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRP 376

Query: 402 NMLPS 406
             LPS
Sbjct: 377 PGLPS 381


>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 662

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 256/365 (70%), Positives = 303/365 (83%), Gaps = 3/365 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL  ELWHACAGPLVT+PREGERVYYFP+GH+EQ+EAS +Q  +QQMP ++LPSKILC+V
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           IN+Q +AEP+TDEV+AQ+TLLPE +Q E     + P   P +  VHSFCKTLTASDTSTH
Sbjct: 78  INIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMH+GVLATA HA++T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+     S+GMRFKMRFEGEEAPE+RF+GTIVG++
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 316

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP--RPKRPRS 401
           +     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P  R KRPR 
Sbjct: 317 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRP 376

Query: 402 NMLPS 406
             LPS
Sbjct: 377 PGLPS 381


>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
 gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
 gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
 gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 665

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 256/365 (70%), Positives = 303/365 (83%), Gaps = 3/365 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL  ELWHACAGPLVT+PREGERVYYFP+GH+EQ+EAS +Q  +QQMP ++LPSKILC+V
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           IN+Q +AEP+TDEV+AQ+TLLPE +Q E     + P   P +  VHSFCKTLTASDTSTH
Sbjct: 78  INIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVHSFCKTLTASDTSTH 136

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMH+GVLATA HA++T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+     S+GMRFKMRFEGEEAPE+RF+GTIVG++
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 316

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP--RPKRPRS 401
           +     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P  R KRPR 
Sbjct: 317 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRP 376

Query: 402 NMLPS 406
             LPS
Sbjct: 377 PGLPS 381


>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
          Length = 672

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 255/378 (67%), Positives = 305/378 (80%), Gaps = 3/378 (0%)

Query: 29  NSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           NS  +G   +G    ALY ELWHACAGPLVTVPR+GERVYYFPQGH+EQ+EAST+Q  DQ
Sbjct: 3   NSGVAGA--LGSSSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQ 60

Query: 89  QMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV 148
            +P+++LPSKILC+V+NV+L+AE D+DEV+AQ+ L PE++Q E +   +P P  P + + 
Sbjct: 61  HLPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPETDQSEPS-SADPEPHEPEKCNA 119

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           HSFCKTLTASDTSTHGGFSVLRRHA+ECLPPLDM++ PP QEL AKDLH NEW FRHIFR
Sbjct: 120 HSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFR 179

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQPRRHLL +GWSVFVSSKRLVAGDAFIFLRG+NG+LRVGVRR MRQ  N+PSSVISSHS
Sbjct: 180 GQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQLNNMPSSVISSHS 239

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           MHLGVLATA HA+STGT+F+V+YKPRTS SEF+V  ++Y+E+  N  S+GMRFKMRFEG+
Sbjct: 240 MHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNNKMSVGMRFKMRFEGD 299

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           EAPE+RF+GTI+G+       W DS WR LKV+WDE S IPRP+RVS W++EP +A    
Sbjct: 300 EAPERRFSGTIIGVGSMTTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELEPLVATSIQ 359

Query: 389 NSLPMPRPKRPRSNMLPS 406
              P  R KR R    PS
Sbjct: 360 PPQPPARNKRARPPASPS 377


>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
          Length = 678

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 271/450 (60%), Positives = 332/450 (73%), Gaps = 22/450 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLVTVPR+GE VYYFPQGH+EQ+EAST+Q  DQ +P+++LPSKILC+V
Sbjct: 22  ALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKV 81

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+AE D+DEV+AQ+ L PE++Q+E    K P P  P + +VHSFCKTLTASDTSTH
Sbjct: 82  VNVELRAETDSDEVYAQIMLQPEADQNELTSPK-PEPHEPEKCNVHSFCKTLTASDTSTH 140

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLPPLDM++ PP QEL A+DLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+  +  S+GMRFKMRFEG+EAPE+RF+GTI+G+ 
Sbjct: 261 GTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVG 320

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
                 W +S WR LKV+WDE S +PRP+RVS W++EP       NS P P+P  P  N 
Sbjct: 321 SMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVS---NSQPSPQP--PARNK 375

Query: 404 LPSSPDSSVLTRE-----GSSKLNVDPSSATGFSRVLQGQE---------FSTLRGNFAE 449
               P SS +  E     G  K + + +    FS + + QE         FST       
Sbjct: 376 RARPPASSSIAPELPPVFGLWKSSAESTQGFSFSGLQRTQELYPSSPNPIFSTSLNVGFS 435

Query: 450 RESNESDTAEKSVVWPPSLDDEKIDVVSAS 479
            ++  S  + K   WP  + + + D  SAS
Sbjct: 436 TKNEPSALSNKHFYWP--MRETRADSYSAS 463


>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
 gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
 gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
           Group]
 gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
 gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
          Length = 678

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/402 (64%), Positives = 315/402 (78%), Gaps = 11/402 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLVTVPR+GE VYYFPQGH+EQ+EAST+Q  DQ +P+++LPSKILC+V
Sbjct: 22  ALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKV 81

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+AE D+DEV+AQ+ L PE++Q+E    K P P  P + +VHSFCKTLTASDTSTH
Sbjct: 82  VNVELRAETDSDEVYAQIMLQPEADQNELTSPK-PEPHEPEKCNVHSFCKTLTASDTSTH 140

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLPPLDM++ PP QEL A+DLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+  +  S+GMRFKMRFEG+EAPE+RF+GTI+G+ 
Sbjct: 261 GTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVG 320

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
                 W +S WR LKV+WDE S +PRP+RVS W++EP       NS P P+P  P  N 
Sbjct: 321 SMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVS---NSQPSPQP--PARNK 375

Query: 404 LPSSPDSSVLTRE-----GSSKLNVDPSSATGFSRVLQGQEF 440
               P S+ +  E     G  K + + +    FS + + QE 
Sbjct: 376 RARPPASNSIAPELPPVFGLWKSSAESTQGFSFSGLQRTQEL 417


>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 662

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 255/365 (69%), Positives = 302/365 (82%), Gaps = 3/365 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL  ELWHACAGPLVT+PREGERVYYFP+GH+EQ+EAS +Q  +QQMP ++LPSKILC+V
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           IN+Q +AEP+TDEV+AQ+TLLPE +Q E     + P   P +  VHSFCKTLTASDTST 
Sbjct: 78  INIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVHSFCKTLTASDTSTQ 136

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+PSSVISSHSMH+GVLATA HA++T
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITT 256

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEFIV  ++Y+E+     S+GMRFKMRFEGEEAPE+RF+GTIVG++
Sbjct: 257 GTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQ 316

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP--RPKRPRS 401
           +     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P  R KRPR 
Sbjct: 317 ENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRP 376

Query: 402 NMLPS 406
             LPS
Sbjct: 377 PGLPS 381


>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 750

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 316/649 (48%), Positives = 394/649 (60%), Gaps = 48/649 (7%)

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENA-------VEKEPPPPPPPRF--HVHSFCKT 154
           +N++LK EPDTDEV+AQ+TLLP+  QDEN            PP  P      H+HSFCKT
Sbjct: 1   MNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKT 60

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRRH
Sbjct: 61  LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRH 120

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LLQSGWSVFVS+KRLVAGDAFIFLRGENGELRVGVRRA+R Q  +PSSVISSH+MHLGVL
Sbjct: 121 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVL 180

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           ATAWHAV+T +MFTVYYKPRTSP+EF+V  D+Y ES+K NYSIGMRFKMRFEGEEA EQR
Sbjct: 181 ATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 240

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           FTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+ 
Sbjct: 241 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV- 299

Query: 395 RPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERES 452
           R KR RS  N LPS  D S +TRE +SK+  D S     +R L  Q  + L   +   ++
Sbjct: 300 RFKRSRSSVNALPS--DVSTVTREVTSKVMAD-SQQNSLTRALHNQGRTQLTVRY--HDN 354

Query: 453 NESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD--- 509
           ++  T +   VW    + ++ + ++A  +   E W P  R    Y  + S F    D   
Sbjct: 355 SDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWTPT-RSPEGYNQIFSAFKPLKDIHN 412

Query: 510 -----PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPV 562
                PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V  
Sbjct: 413 PLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVMP 470

Query: 563 QGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSA 622
           +G +      G   +    D+     +     H       +  S+  + A S  + P+  
Sbjct: 471 EGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQPL 519

Query: 623 MVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESDQ 677
           ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D 
Sbjct: 520 VLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVDN 579

Query: 678 KSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
            S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC KV
Sbjct: 580 CSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKV 627


>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
          Length = 673

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/369 (68%), Positives = 300/369 (81%), Gaps = 5/369 (1%)

Query: 33  SGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV 92
           S  ++  DP   LY ELWHACAGPLVT+PR GERVYYFPQGH+EQ+EAS +Q  + QMP 
Sbjct: 10  SAEQQADDP---LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPS 66

Query: 93  YDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFC 152
           +DLPSKILC+V +VQ KAEPDTDEV+AQ+TL+PE +Q E  +  + P   P R  VHSFC
Sbjct: 67  FDLPSKILCKVASVQRKAEPDTDEVYAQITLVPEVDQSE-VMSPDDPLQEPERCIVHSFC 125

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QEL A DLHGNEW FRHIFRGQPR
Sbjct: 126 KTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPR 185

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVSSK+LVAGDAFIFLRG NG+LRVGVRR MRQQ N+PSSVISSHSMHLG
Sbjct: 186 RHLLTTGWSVFVSSKKLVAGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLG 245

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
           VLATA +A+ST +MF+++YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEGEE PE
Sbjct: 246 VLATASYALSTRSMFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPE 305

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SL 391
           +RF+GTIVG+E      W DS+WR LKV+WDE S+I RP+RVS W++EP +A    + S 
Sbjct: 306 RRFSGTIVGVEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQ 365

Query: 392 PMPRPKRPR 400
           P  R KR R
Sbjct: 366 PAQRNKRAR 374


>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
 gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
          Length = 661

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 242/346 (69%), Positives = 287/346 (82%), Gaps = 4/346 (1%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G P  ALY ELWHACAGPLVTVPR+GERVYYFPQGH+EQ+EAST+Q  DQ +P+++LP K
Sbjct: 18  GMPSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLDQYLPMFNLPPK 77

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
           ILC V+NV+L+AE D+DEV+AQ+ L PE++Q+E     +P P  P +   HSFCKTLTAS
Sbjct: 78  ILCSVVNVELRAEADSDEVYAQIMLQPEADQNE-LTSLDPEPQEPEKCTAHSFCKTLTAS 136

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLRRHA+ECLP LDMS  PP QEL AKDLHG EW FRHIFRGQP+RHLL +
Sbjct: 137 DTSTHGGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTT 196

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVSSKRLVAGDAFIF+RGENGELRVGVRR MRQ  ++PSSVISSHSMHLGVLATA 
Sbjct: 197 GWSVFVSSKRLVAGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATAS 256

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+STGT+F+V+YKPRTS S+FIV  ++Y+E+ K   S+GMRFKMRFEG+EAPE+RF+GT
Sbjct: 257 HAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDEAPERRFSGT 316

Query: 339 IVGIED---ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP 381
           I+GI          W DS WR LKV+WDE S+I RP+R+S W++EP
Sbjct: 317 IIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEP 362


>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 693

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 270/446 (60%), Positives = 323/446 (72%), Gaps = 32/446 (7%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G  R G     LY ELW ACAGPLV VP +GERV+YFPQGH+EQ+E STNQ  + Q+P +
Sbjct: 9   GESRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHF 68

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCK 153
           DLP KILCRV+N++L AE +TDEV+AQ+TL PE++Q E     +P PP   R  VHSFCK
Sbjct: 69  DLPPKILCRVVNIRLLAEKETDEVYAQITLYPEADQSEPQ-SADPEPPERTRQTVHSFCK 127

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
            LTASDTSTHGGFSVLR+HA ECLPPLDMS+  PTQELAAKDLHG EW+F+HIFRGQPRR
Sbjct: 128 ILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRR 187

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS FV+SKRLVAGDAF+FLRG+NGELRVGVRR  RQQ  +PSSVISSHSMHLGV
Sbjct: 188 HLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGV 247

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           LATA HAV T T F VYYKPRT  S+FI+  ++Y+E++KN Y +GMRFKMRFEGEE+PE+
Sbjct: 248 LATASHAVRTQTYFVVYYKPRT--SQFIISLNKYLETVKNGYEVGMRFKMRFEGEESPER 305

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SLP 392
           RFTGTIVG+ D  PQ W DSKWR LK++WDE +TI RPERVS W+IEP +   +LN + P
Sbjct: 306 RFTGTIVGVGDMSPQ-WSDSKWRSLKIQWDEPATIQRPERVSPWEIEPFVPSASLNFTHP 364

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQG----QEFSTLRGNFA 448
             + KR R   +P    +S              S+ +GF   LQG     E S L G   
Sbjct: 365 AIKSKRARPVEIPPPEVTS-------------GSAPSGF--WLQGSTISHEISQLSG--- 406

Query: 449 ERESNESDTAEKSVVWPPSLDDEKID 474
              +NE  ++   VVW  +L   K+D
Sbjct: 407 ---TNEVQSSNNRVVW--ALGQRKLD 427


>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
 gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
          Length = 672

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/414 (62%), Positives = 317/414 (76%), Gaps = 10/414 (2%)

Query: 33  SGVKRV-GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           +GV R  G    AL+ ELWHACAGPLVTVPR+GE VYYFPQGH+EQ+EAST+Q  DQ +P
Sbjct: 4   AGVARGPGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLP 63

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSF 151
           +++LP KILC+V+NV+L+AE D+DEV+AQ+ L PE+ Q+E     +  PP P R +VHSF
Sbjct: 64  LFNLPPKILCKVVNVELRAETDSDEVYAQIMLQPEAEQNE-PTSPDAEPPEPERCNVHSF 122

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSVLRRHA+ECLP LDM++ PP QEL AKDLHGNEW FRHIFRGQP
Sbjct: 123 CKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQP 182

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLL +GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHL
Sbjct: 183 RRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHL 242

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           GVLATA HA+STGT+F+V+YKPRTS SEF+V  ++Y+E+  +  S+GMRFKMRFEG+E+P
Sbjct: 243 GVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESP 302

Query: 332 EQRFTGTIVGIEDADPQR---WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           E+RF+GTI+G+          W +S+WR LKV+WDE S I RP+RVS W++EP     A 
Sbjct: 303 ERRFSGTIIGLGSMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPL---DAT 359

Query: 389 NSLPMPRPKRPRSNMLPSSPDSS--VLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           N  P   P R +    P+SP  +  +    G  K   +P+ A  FS + + QE 
Sbjct: 360 NPQPPQPPLRNKRARPPASPSIAPELPPVFGFWKSPAEPAQAFSFSGLQRTQEL 413


>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
          Length = 693

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 248/366 (67%), Positives = 293/366 (80%), Gaps = 5/366 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL+ ELWHACAGPL+TVPR+GERVYYFPQGHIEQ+EASTNQ  DQ +P+++LPSKILC V
Sbjct: 70  ALFHELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMFNLPSKILCSV 129

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+ E D+DEV+AQ+ L P+  Q E  +    PP    R  +HSFCKTLTASDTSTH
Sbjct: 130 VNVELRTEADSDEVYAQIMLQPQDEQSE--LTSAGPPQELERGTIHSFCKTLTASDTSTH 187

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLP LDMS+ PP QEL AKDLHG EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 188 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGWSVF 247

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRG NGELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 248 VSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHLGVLATASHAIST 307

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+ K N S+GMRFKM+FEG+EA E+RF+GTIVG+ 
Sbjct: 308 GTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNMSVGMRFKMKFEGDEALERRFSGTIVGMG 367

Query: 344 DADPQ---RWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
                   +W DS W+ LKV+WDE S+I RP+RVSLW++EP  +       P  R KR R
Sbjct: 368 STPTMPSSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEPLDSANPQTPEPPLRNKRAR 427

Query: 401 SNMLPS 406
           +   PS
Sbjct: 428 ALASPS 433


>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/368 (66%), Positives = 300/368 (81%), Gaps = 16/368 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LY ELW ACAGPLV VPR GERV+YFPQGH+EQ+EASTNQ   Q++P+++LPSKILCRVI
Sbjct: 12  LYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCRVI 71

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           ++QL+AE +TDEV+AQ+TLLPE +Q E     +P  P PPR  VHSFCK LTASDTSTHG
Sbjct: 72  HIQLRAEQETDEVYAQITLLPEPDQAEPR-SPDPCTPEPPRPTVHSFCKVLTASDTSTHG 130

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA+ECLP LDM++  PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 131 GFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 190

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SKRLVAGD+F+FLRG+NGELRVGVRR  RQQ  +P+SVISS SMHLGVLATA HAV+T 
Sbjct: 191 TSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATASHAVATQ 250

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           T+F VYYKPRT  S+FI+  ++Y+E++ N +++GMRFKMRFEGE++PE+RF+GTIVG ED
Sbjct: 251 TLFIVYYKPRT--SQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIVGGED 308

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE-------PALAPPALNSLPMPRPK 397
             P+ W+DS+WR LKV+WDE ++IPRPE+VS W+IE         LAPP +      + K
Sbjct: 309 FSPE-WKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGV-----LKNK 362

Query: 398 RPRSNMLP 405
           RPRSN  P
Sbjct: 363 RPRSNESP 370


>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
          Length = 693

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 248/378 (65%), Positives = 302/378 (79%), Gaps = 16/378 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LY ELW ACAGPLV VPR GERV+YFPQGH+EQ+EASTNQ   Q++P+++LPSKILCRVI
Sbjct: 12  LYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCRVI 71

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           ++QL+AE +TDEV+AQ+TLLPE +Q E     +P  P PPR  VHSFCK LTASDTSTHG
Sbjct: 72  HIQLRAEQETDEVYAQITLLPEPDQAE-PRSPDPCTPEPPRPTVHSFCKVLTASDTSTHG 130

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA+ECLP LDM++  PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 131 GFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 190

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SKRLVAGD+F+FLRG+NGELRVGVRR  RQQ  +P+SVISS SMHLGVLATA HAV+T 
Sbjct: 191 TSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATASHAVATQ 250

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           T+F VYYKPRT  S+FI+  ++Y+E++ N +++GMRFKMRFEGE++PE+RF+GTIVG ED
Sbjct: 251 TLFIVYYKPRT--SQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIVGGED 308

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE-------PALAPPALNSLPMPRPK 397
             P+ W+DS+WR LKV+WDE ++IPRPE+VS W+IE         LAPP +      + K
Sbjct: 309 FSPE-WKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGV-----LKNK 362

Query: 398 RPRSNMLPSSPDSSVLTR 415
           RPRSN  P       L R
Sbjct: 363 RPRSNESPVPGQGKFLHR 380


>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
          Length = 672

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/401 (63%), Positives = 310/401 (77%), Gaps = 7/401 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL+ ELWHACAGPLVTVPR+GE VYYFPQGH+EQ+EAST+Q  DQ +P++DLP KILC+V
Sbjct: 16  ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFDLPPKILCKV 75

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+AE D+DEV+AQ+ L PE++Q E     +  PP P R +V+SFCKTLTASDTSTH
Sbjct: 76  VNVELRAETDSDEVYAQIMLQPEADQSE-PTSPDSEPPEPERCNVYSFCKTLTASDTSTH 134

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLP LDM++ PP QEL AKDLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 135 GGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 194

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSH+MHLGVLATA HA+ST
Sbjct: 195 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLATASHAIST 254

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+  +  S+GMRFKMRFEG+E+PE+R +GTI+G+ 
Sbjct: 255 GTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESPERRLSGTIIGLG 314

Query: 344 DADPQR---WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
                    W +S WR L+V+WDE S I RP+RVS W++EP  A       P  R KR R
Sbjct: 315 SMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDATNPQPPQPHLRNKRAR 374

Query: 401 -SNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
              +L  +P+   +   G  K   +P+ A  FSR  Q QE 
Sbjct: 375 PPALLSIAPELPQVF--GFLKSPAEPAQAFSFSRPQQTQEL 413


>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
 gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
          Length = 669

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/368 (67%), Positives = 293/368 (79%), Gaps = 7/368 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL+ ELWHACAGPLVTVP+ GERVYYFPQGH+EQ+EASTNQ  DQ +P+++LPSKILC V
Sbjct: 16  ALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSV 75

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+AE D+DEV+AQ+ L PE++Q E     +P      +   HSFCKTLTASDTSTH
Sbjct: 76  VNVELRAEADSDEVYAQIMLQPEADQSE-LTSLDPELQDLEKCTAHSFCKTLTASDTSTH 134

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLP LDMS+ PP QEL AKDLHG EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 135 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVF 194

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGE+GELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 195 VSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIST 254

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+ K N S+GMRFKMRFEG+EAPE+RF+GTI+GI 
Sbjct: 255 GTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIG 314

Query: 344 DADPQR---WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
                    W DS W+ LKV+WDE S I RP+RVS W++EP  A       P  R KR R
Sbjct: 315 SVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRAR 374

Query: 401 SNMLPSSP 408
               P+SP
Sbjct: 375 P---PASP 379


>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
 gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
 gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
          Length = 673

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/368 (67%), Positives = 293/368 (79%), Gaps = 7/368 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL+ ELWHACAGPLVTVP+ GERVYYFPQGH+EQ+EASTNQ  DQ +P+++LPSKILC V
Sbjct: 20  ALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSV 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+AE D+DEV+AQ+ L PE++Q E     +P      +   HSFCKTLTASDTSTH
Sbjct: 80  VNVELRAEADSDEVYAQIMLQPEADQSE-LTSLDPELQDLEKCTAHSFCKTLTASDTSTH 138

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLP LDMS+ PP QEL AKDLHG EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 139 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVF 198

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGE+GELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 199 VSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIST 258

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+ K N S+GMRFKMRFEG+EAPE+RF+GTI+GI 
Sbjct: 259 GTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIG 318

Query: 344 DADPQR---WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
                    W DS W+ LKV+WDE S I RP+RVS W++EP  A       P  R KR R
Sbjct: 319 SVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRAR 378

Query: 401 SNMLPSSP 408
               P+SP
Sbjct: 379 P---PASP 383


>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
 gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
          Length = 657

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 249/374 (66%), Positives = 298/374 (79%), Gaps = 8/374 (2%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLPS 97
           G P  ALY ELWHACAGPLVTVPR+GERVYYFPQGH+EQ+EAS + Q  DQ +P++DLP 
Sbjct: 13  GMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMFDLPP 72

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           KILCRV+NV+L+AE D+DEV+AQ+ L PE++Q+E     +  P    +   HSFCKTLTA
Sbjct: 73  KILCRVVNVELRAEADSDEVYAQIMLQPEADQNE-LTSLDAEPQEREKCTAHSFCKTLTA 131

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHA+ECLP LDMS+ PP QEL AKDLHG EW FRHIFRGQP+RHLL 
Sbjct: 132 SDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLT 191

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWSVFVSSKRLV+GDAFIF+RGENGELRVGVRR MRQ  ++PSSVISSHSMHLGVLATA
Sbjct: 192 TGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATA 251

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
            HA+STGT+F+V+YKPRTS S+FIV  ++Y+E+ K   S+GMRFKMRFEG++APE+RF+G
Sbjct: 252 SHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDDAPERRFSG 311

Query: 338 TIVGIED---ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           TI+GI          W DS WR LKV+WDE S+I RP+R+S W++EP  A    +  P  
Sbjct: 312 TIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDAANPQSPQPPL 371

Query: 395 RPKRPRSNMLPSSP 408
           R KRPR    P+SP
Sbjct: 372 RAKRPRP---PASP 382


>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
 gi|238014618|gb|ACR38344.1| unknown [Zea mays]
 gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
          Length = 511

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 255/401 (63%), Positives = 310/401 (77%), Gaps = 7/401 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL+ ELWHACAGPLVTVPR+GE VYYFPQGH+EQ+EAST+Q  DQ +P++DLP KILC+V
Sbjct: 16  ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFDLPPKILCKV 75

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+AE D+DEV+AQ+ L PE++Q E     +  PP P R +V+SFCKTLTASDTSTH
Sbjct: 76  VNVELRAETDSDEVYAQIMLQPEADQSE-PTSPDSEPPEPERCNVYSFCKTLTASDTSTH 134

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLP LDM++ PP QEL AKDLHGNEW FRHIFRGQPRRHLL +GWSVF
Sbjct: 135 GGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 194

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSH+MHLGVLATA HA+ST
Sbjct: 195 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLATASHAIST 254

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+  +  S+GMRFKMRFEG+E+PE+R +GTI+G+ 
Sbjct: 255 GTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESPERRLSGTIIGLG 314

Query: 344 DADPQR---WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
                    W +S WR L+V+WDE S I RP+RVS W++EP  A       P  R KR R
Sbjct: 315 SMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDATNPQPPQPHLRNKRAR 374

Query: 401 -SNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
              +L  +P+   +   G  K   +P+ A  FSR  Q QE 
Sbjct: 375 PPALLSIAPELPQVF--GFLKSPAEPAQAFSFSRPQQTQEL 413


>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
          Length = 1673

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/368 (67%), Positives = 293/368 (79%), Gaps = 7/368 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL+ ELWHACAGPLVTVP+ GERVYYFPQGH+EQ+EASTNQ  DQ +P+++LPSKILC V
Sbjct: 16  ALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSV 75

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+AE D+DEV+AQ+ L PE++Q E     +P      +   HSFCKTLTASDTSTH
Sbjct: 76  VNVELRAEADSDEVYAQIMLQPEADQSE-LTSLDPELQDLEKCTAHSFCKTLTASDTSTH 134

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLP LDMS+ PP QEL AKDLHG EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 135 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVF 194

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGE+GELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 195 VSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIST 254

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+ K N S+GMRFKMRFEG+EAPE+RF+GTI+GI 
Sbjct: 255 GTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIG 314

Query: 344 DADPQR---WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
                    W DS W+ LKV+WDE S I RP+RVS W++EP  A       P  R KR R
Sbjct: 315 SVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQPPLRNKRAR 374

Query: 401 SNMLPSSP 408
               P+SP
Sbjct: 375 P---PASP 379


>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
          Length = 660

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/368 (67%), Positives = 292/368 (79%), Gaps = 7/368 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL+ ELWHACAGPLVTVP+ GERVYYFPQGH+EQ+EASTNQ  DQ +P+++LPSKILC V
Sbjct: 16  ALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSV 75

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV+L+AE D+DEV+AQ+ L PE++Q E     +P      +   HSFCKTLTASDTSTH
Sbjct: 76  VNVELRAEADSDEVYAQIMLQPEADQSE-LTSLDPELQDLEKCTAHSFCKTLTASDTSTH 134

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHA+ECLP LDMS+ PP QEL AKDLHG EW FRHIFRGQPRRHLL +GWSVF
Sbjct: 135 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVF 194

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAFIFLRGE+GELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 195 VSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAIST 254

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS SEF+V  ++Y+E+ K N S+GMRFKMRFEG+EAPE+RF+GTI+GI 
Sbjct: 255 GTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIG 314

Query: 344 DADPQR---WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
                    W DS W+ LKV+WDE S I  P+RVS W++EP  A       P  R KR R
Sbjct: 315 SVPAMSKSPWADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDASNPQPPQPPLRNKRAR 374

Query: 401 SNMLPSSP 408
               P+SP
Sbjct: 375 P---PASP 379


>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
 gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
          Length = 575

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 251/364 (68%), Positives = 300/364 (82%), Gaps = 6/364 (1%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G  E  LYTELW ACAGPLV VP+ GERV+YFPQGH+EQ+EASTNQ  +Q++P+++LPSK
Sbjct: 11  GCGEDDLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSK 70

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
           ILCRVIN QL AE +TDEV+AQ+TLLPES+Q E     +P P  PPR  VHSFCK LTAS
Sbjct: 71  ILCRVINTQLLAEQETDEVYAQITLLPESDQIETT-SPDPCPSEPPRPTVHSFCKVLTAS 129

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLR+HA ECLPPLDM +  PTQEL AKDLHG EWRF+HIFRGQPRRHLL +
Sbjct: 130 DTSTHGGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 189

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+SKRLVAGD+F+FLRGENGELRVGVRR  RQQ ++PSSVISS SMHLGVLATA 
Sbjct: 190 GWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVLATAS 249

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ST T+F VYYKPRT  S+FI+  ++Y+E++ N +++GMRFKMRFEGE++PE+RF+GT
Sbjct: 250 HAISTLTLFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRFKMRFEGEDSPERRFSGT 307

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA--PPALNSLPMPRP 396
           IVG+ED  P  W DSKWR LKV+WDE ++I RP+RVS W+IEP +A  P  L+    P+ 
Sbjct: 308 IVGVEDFSPH-WNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCVASVPANLSQPVQPKN 366

Query: 397 KRPR 400
           KRPR
Sbjct: 367 KRPR 370


>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/370 (66%), Positives = 301/370 (81%), Gaps = 9/370 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L+TELW ACAGPLV VP+  ERV+YFPQGH+EQ++ASTNQ  DQ++P+++LPSKILCRV+
Sbjct: 20  LFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLFNLPSKILCRVV 79

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP--PPPPPRFHVHSFCKTLTASDTST 162
           + +L AE +TDEV+AQ+TL PE++Q E    K P   P   P+  VHSFCK LTASDTST
Sbjct: 80  HTRLLAEQETDEVYAQITLQPEADQTE---PKSPDSCPDEAPKQTVHSFCKILTASDTST 136

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSVLR+HA+ECLPPLDMS+  PTQEL A+DLHG EWRF+HIFRGQPRRHLL +GWS 
Sbjct: 137 HGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 196

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FV+SKRLVAGDAF+FLRG+NGELRVGVRR  RQQ  +PSSVISS SMHLGVLATA HAV+
Sbjct: 197 FVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVT 256

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
           T T+F VYYKPRT  S+FI+  ++Y+E++   +++GMRFKMRFEGE++PE+RFTGTIVGI
Sbjct: 257 TQTLFVVYYKPRT--SQFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPERRFTGTIVGI 314

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SLPMPRPKRPRS 401
            D  PQ W +SKWR LK++WDE +TI RPERVS W IEP +A  +LN + P  + KRPR 
Sbjct: 315 GDISPQ-WSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPPVKIKRPRP 373

Query: 402 NMLPSSPDSS 411
             LP + ++S
Sbjct: 374 LDLPVAENTS 383


>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 764

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/378 (64%), Positives = 304/378 (80%), Gaps = 9/378 (2%)

Query: 37  RVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP 96
           R+G    A+ ++LW ACAGPLV VP+  ERV+YFPQGH+EQ++ASTNQ  DQ++P+++LP
Sbjct: 75  RMGIISEAVSSQLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLFNLP 134

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP--PPPPPRFHVHSFCKT 154
           SKILCRV++ +L AE +TDEV+AQ+TL PE++Q E    K P   P   P+  VHSFCK 
Sbjct: 135 SKILCRVVHTRLLAEQETDEVYAQITLQPEADQTE---PKSPDSCPDEAPKQTVHSFCKI 191

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSVLR+HA+ECLPPLDMS+  PTQEL A+DLHG EWRF+HIFRGQPRRH
Sbjct: 192 LTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRH 251

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+SKRLVAGDAF+FLRG+NGELRVGVRR  RQQ  +PSSVISS SMHLGVL
Sbjct: 252 LLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVL 311

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           ATA HAV+T T+F VYYKPRT  S+FI+  ++Y+E++   +++GMRFKMRFEGE++PE+R
Sbjct: 312 ATASHAVTTQTLFVVYYKPRT--SQFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPERR 369

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SLPM 393
           FTGTIVGI D  PQ W +SKWR LK++WDE +TI RPERVS W IEP +A  +LN + P 
Sbjct: 370 FTGTIVGIGDISPQ-WSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPP 428

Query: 394 PRPKRPRSNMLPSSPDSS 411
            + KRPR   LP + ++S
Sbjct: 429 VKIKRPRPLDLPVAENTS 446


>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
 gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
          Length = 694

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/358 (69%), Positives = 299/358 (83%), Gaps = 5/358 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LYTELW ACAGPLV VP++GERV+YFPQGH+EQ+EASTNQ  +Q++P+++LPSKILCRVI
Sbjct: 22  LYTELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRVI 81

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           N+ L AE DTDEV+AQ+TLLPES+Q E       P  P  R  VHSFCK LTASDTSTHG
Sbjct: 82  NIHLLAEQDTDEVYAQITLLPESDQTEPTSPDPSPAEPSRRPAVHSFCKVLTASDTSTHG 141

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA ECLP LDM++  PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 142 GFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SKRLVAGD+F+FLRGENGELRVGVRR  RQQ ++PSSVISS SMHLGVLATA HAV+T 
Sbjct: 202 TSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 261

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           T+F VYYKPRT  S+FI+  ++Y+E+I N +S+GMRFKMRFEGE++PE+RF+GTIVG+ED
Sbjct: 262 TLFVVYYKPRT--SQFIISLNKYLEAINNKFSVGMRFKMRFEGEDSPERRFSGTIVGVED 319

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP-ALAPPALNSLPMP-RPKRPR 400
             P  W DSKWR LKV+WDE ++IPRP++VS W+IEP + + P+  S P+P + KRPR
Sbjct: 320 FSPH-WLDSKWRQLKVQWDEPASIPRPDKVSPWEIEPFSASAPSNISQPVPLKNKRPR 376


>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
          Length = 775

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 314/650 (48%), Positives = 382/650 (58%), Gaps = 78/650 (12%)

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
           PP PR    SFCKTLTASDTSTHGGFSVLRRHADECLPPLDM++QPP QEL AKDLHG  
Sbjct: 8   PPHPRSGACSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVG 67

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 260
           W FRHIFRGQPRRHLL +GWSVFVSSKRL+AGDAFIFLRG+NGELRVGVRRAMRQQ NV 
Sbjct: 68  WHFRHIFRGQPRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVS 127

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
           SSVISSHSMHLGV+ATA HAVST TMFTVYYKPRTSPS FI+PY++YME++ NN+S+GMR
Sbjct: 128 SSVISSHSMHLGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAMNNNFSVGMR 187

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           FKMRFEGEEAPEQRF GTI+G  D+DP RW  SKWR LKV+WDE S + RPERVS W+IE
Sbjct: 188 FKMRFEGEEAPEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIE 247

Query: 381 PALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
                 AL+ LP+ R KRPR N+LPSSP  S+L       +N   + A  FSRVLQGQE 
Sbjct: 248 LIATAAALSPLPVSRNKRPRENLLPSSPILSILGSFKEDSMNF--TQAHKFSRVLQGQEV 305

Query: 441 STLRGNFAERESNESDTAEKSVVW-----------PPSLDDEKIDVVSASRRYGSENWVP 489
            T    F E   N++D+A K   W            P LDD K   +++ RR G ENW  
Sbjct: 306 KTRARTFGE---NQADSAGKPSFWGLRHYQNPILSEPKLDDIKSVGMASQRRLGLENWTT 362

Query: 490 PGRHEPVYTDLLSGF-GANADPSHGFSSPFAD---------AVPVRK------SVLDQEG 533
             + +  Y++   G  G    P   F  PF+           +P+         + D  G
Sbjct: 363 LLKPDSAYSETFIGLNGIGEMPE--FCGPFSYEALENAQHLKLPMNNFQHQDDGIFDASG 420

Query: 534 KFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEH 593
             + ++RPW +  S    +M ESN K+P     +  +  G+        + +     V  
Sbjct: 421 ARSQLSRPWPMPFSSNLQEMSESNLKLPAATSSLLQKQSGSESMVALNSFTLHTNRGVGK 480

Query: 594 SHGNWLMPPLPPSNFENSAHSR-----------------------ELMPKSAMVQDQEAG 630
           S GNW +    PS  E S  SR                       +  P   +  D E G
Sbjct: 481 SQGNWFVSLSSPSRLEVSGASRPGNFDRNGMRKMPAVNLGVLAQQKNGPACEIATDTEMG 540

Query: 631 ----KSKDCKLFGIPLFSNHVMPE---PVV-------SHRNTMNEPAGNLDQQFRAFESD 676
                + +CKLFG  L  N V+ E   PV+         +  ++ P  NL Q     E D
Sbjct: 541 PTAPSANNCKLFGFQLVDNSVVSESTTPVIIGSVTGEDMQAAVHAPRENLSQ---PAELD 597

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           Q+S+ SK+SK +D      E EK SQ S   +K+ + + +  S RS TKV
Sbjct: 598 QQSEPSKTSK-SDPPTSSCEREKWSQRS---SKETQFRAESNSFRSHTKV 643


>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
 gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
 gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
          Length = 677

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 258/416 (62%), Positives = 315/416 (75%), Gaps = 14/416 (3%)

Query: 33  SGVKR-VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           +GV R  G    AL+ ELWHACAGPLVTVPR+GE VYYFPQGH+EQ+EAST+Q  DQ +P
Sbjct: 4   AGVARGSGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLP 63

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSF 151
           +++LP KILC+V+NV+L+AE D+DEV+AQ+ L P++ Q E       PP P  R ++HSF
Sbjct: 64  LFNLPHKILCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPE-RCNIHSF 122

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSVLRRHA+ECLP LDM++ PP QEL AKDLHGNEW FRHIFRGQP
Sbjct: 123 CKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQP 182

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLL +GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHL
Sbjct: 183 RRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHL 242

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           GVLATA HA+STGT+F+V+YKPRTS SEF+V  ++Y+E+  +  S+GMRFKMRFEG+E+P
Sbjct: 243 GVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESP 302

Query: 332 EQRFTGTIVGI-----EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
           E+RF+GTI+G+         P  W +S+WR LKV+WDE S I RP+RVS W++EP     
Sbjct: 303 ERRFSGTIIGMGCMPANSTSP--WANSEWRSLKVQWDEPSAILRPDRVSPWEVEPL---D 357

Query: 387 ALNSLPMPRPKRPRSNMLPSSPDSS--VLTREGSSKLNVDPSSATGFSRVLQGQEF 440
             N  P   P R +    P+SP  +  +    G  K   +P+ A  FS + + QE 
Sbjct: 358 RTNPQPPQPPLRNKRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFSGLQRTQEL 413


>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
          Length = 335

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 234/316 (74%), Positives = 272/316 (86%), Gaps = 1/316 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELWHACAGPLVT+PR+ ERVYYFPQGH+EQ+EAS +Q  +QQMP ++LPSKILC+V
Sbjct: 21  ALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 80

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AE DTDEV+AQ+TLLPESNQ+E     +PP P P R +VHSFCKTLTASDTSTH
Sbjct: 81  VNVVLRAESDTDEVYAQITLLPESNQNE-VTSPDPPLPEPTRCNVHSFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLRRHAD+CLPPLDMS+QPP QEL A DLHGN+W FRHIFRGQPRRHLL +GWSVF
Sbjct: 140 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHLGVLATA HA+ST
Sbjct: 200 VSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           GT+F+V+YKPRTS S F+V  ++Y+E+  +  S+GMRFKMRFEGEE PE+ F+GTIVG+ 
Sbjct: 260 GTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLG 319

Query: 344 DADPQRWRDSKWRCLK 359
           D     W +S+WR LK
Sbjct: 320 DNASPGWANSEWRSLK 335


>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
          Length = 799

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/461 (56%), Positives = 324/461 (70%), Gaps = 26/461 (5%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LY ELW  CAGPLV VPR G+RV+YFPQGH+EQ++AST+Q  +Q++P ++LP+KI CRV+
Sbjct: 112 LYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRVV 171

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           N+QL AE DTDEV+A + LLPES+Q E     +P    PP+   HSFCK LTASDTSTHG
Sbjct: 172 NIQLLAEQDTDEVYACIALLPESDQTE-PTNPDPNISEPPKQKFHSFCKILTASDTSTHG 230

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA ECLP LDM++  PTQELAAKDLHG EW+F+HI+RGQPRRHLL +GWS FV
Sbjct: 231 GFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFV 290

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SKRLVAGDAF+FLRGE+G+LRVGVRR  RQQ  +PSSVISS SMHLGVLATA HAV T 
Sbjct: 291 ASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTR 350

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           TMF VYYKPRT  S+FIV  ++Y+E++ N +S+GMRFKMRFEG+++PE+RF+GTIVG+ D
Sbjct: 351 TMFLVYYKPRT--SQFIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERRFSGTIVGVGD 408

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SLPMPRPKRPRSNM 403
                W +S+WR LKV+WDE +TIPRP+RVS W+IEP +A  ALN + P  + KR R   
Sbjct: 409 VSAG-WSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAVKGKRSR--- 464

Query: 404 LPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVV 463
            P+               +V  S+A+GF       E S L    AE +S E+     S+ 
Sbjct: 465 -PA---------------DVSSSAASGFWYHGSSNELSQLGAATAEVQSKENQVVPCSLR 508

Query: 464 WPPSLDDEKIDV--VSASRRYGSENWVPPGRHEPVYTDLLS 502
               ++   ID    S S R   E   P   H  V  +L S
Sbjct: 509 QKDIINSNPIDANNSSISSRVRMEGVWPSSPHLNVTPNLFS 549


>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
          Length = 672

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/369 (67%), Positives = 297/369 (80%), Gaps = 5/369 (1%)

Query: 33  SGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV 92
           S  ++  DP   LY ELWHACAGPLVT+PR GERVYYFPQGH+EQ+EAS +Q  + QMP 
Sbjct: 10  SAEQQADDP---LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPS 66

Query: 93  YDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFC 152
           +DLPSKILC+V +VQ KAEPDTDEV+AQ+TL+PE +Q E  +  + P   P R  VHSFC
Sbjct: 67  FDLPSKILCKVASVQRKAEPDTDEVYAQITLVPEVDQSE-VMSPDDPLQEPERCIVHSFC 125

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSVLRRHAD+CLPPLDM++QPP QEL A DLHGNEW FRHI RGQPR
Sbjct: 126 KTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPR 185

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVSSK+LVAGDA IFLRG NG+LRVGVRR MRQQ N+PSSVISSHS+ LG
Sbjct: 186 RHLLTTGWSVFVSSKKLVAGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILG 245

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
           VLATA +A+ST +MF+++YKPRTS SEFIV  ++Y+E+  +  S+GMRFKMRFEGEE PE
Sbjct: 246 VLATASYALSTRSMFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPE 305

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SL 391
           +RF+GTIVG+E      W DS+WR LKV+WDE S+I RP+RVS W++EP +A    + S 
Sbjct: 306 RRFSGTIVGVEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQ 365

Query: 392 PMPRPKRPR 400
           P  R KR R
Sbjct: 366 PAQRNKRAR 374


>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
          Length = 801

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/425 (59%), Positives = 299/425 (70%), Gaps = 19/425 (4%)

Query: 17  ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIE 76
           E  R+ +EG    S     K + D    LYTELW  CAGPLV + R G++V YFPQGHIE
Sbjct: 113 ERMRVDLEGDGLQS-----KNIQDENDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIE 167

Query: 77  QVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK 136
           QVEA TNQ    +MP+Y+LPSKI C+V+ VQLKAE  TDEVFAQVTLLPE+ Q+  + + 
Sbjct: 168 QVEAYTNQDGQMEMPIYNLPSKIFCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDH 227

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
                 P R H +SF KTLT SDT+THGGFSV +RHADECLPPLDM++QPP QEL AKDL
Sbjct: 228 GNSQFFPRRTHSYSFSKTLTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDL 287

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HG EWRFRHIFRGQP+RHLL SGWS FV+SK+LVAGDA IFLRG NGELRVGVRRA R Q
Sbjct: 288 HGTEWRFRHIFRGQPKRHLLTSGWSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQ 347

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
            NV +SV+S HSM  G+LA+A+HA+STGTMFTVY++P TSP EFI+PYDQY++S +NNYS
Sbjct: 348 NNVSASVLSGHSMQHGILASAFHAISTGTMFTVYFRPWTSP-EFIIPYDQYIKSAENNYS 406

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +G RF+M FEGEE  +QR  GTIVGIED D  RW +S+WR  KV+WD +   P PERV+ 
Sbjct: 407 VGTRFRMLFEGEECSQQRCAGTIVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAA 466

Query: 377 WKIEPA--LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRV 434
           W IEP   +     + LP  +  RP   + P+ P            L  D       S V
Sbjct: 467 WNIEPIEFIKKKHTSILPQLKRARPTDPLCPAIP-----------ILVGDVEHTKIQSGV 515

Query: 435 LQGQE 439
           LQGQE
Sbjct: 516 LQGQE 520


>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/425 (59%), Positives = 299/425 (70%), Gaps = 19/425 (4%)

Query: 17  ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIE 76
           E  R+ +EG    S     K + D    LYTELW  CAGPLV + R G++V YFPQGHIE
Sbjct: 8   ERMRVDLEGDGLQS-----KNIQDENDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIE 62

Query: 77  QVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK 136
           QVEA TNQ    +MP+Y+LPSKI C+V+ VQLKAE  TDEVFAQVTLLPE+ Q+  + + 
Sbjct: 63  QVEAYTNQDGQMEMPIYNLPSKIFCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDH 122

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
                 P R H +SF KTLT SDT+THGGFSV +RHADECLPPLDM++QPP QEL AKDL
Sbjct: 123 GNSQFFPRRTHSYSFSKTLTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDL 182

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HG EWRFRHIFRGQP+RHLL SGWS FV+SK+LVAGDA IFLRG NGELRVGVRRA R Q
Sbjct: 183 HGTEWRFRHIFRGQPKRHLLTSGWSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQ 242

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
            NV +SV+S HSM  G+LA+A+HA+STGTMFTVY++P TSP EFI+PYDQY++S +NNYS
Sbjct: 243 NNVSASVLSGHSMQHGILASAFHAISTGTMFTVYFRPWTSP-EFIIPYDQYIKSAENNYS 301

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +G RF+M FEGEE  +QR  GTIVGIED D  RW +S+WR  KV+WD +   P PERV+ 
Sbjct: 302 VGTRFRMLFEGEECSQQRCAGTIVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAA 361

Query: 377 WKIEPA--LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRV 434
           W IEP   +     + LP  +  RP   + P+ P            L  D       S V
Sbjct: 362 WNIEPIEFIKKKHTSILPQLKRARPTDPLCPAIP-----------ILVGDVEHTKIQSGV 410

Query: 435 LQGQE 439
           LQGQE
Sbjct: 411 LQGQE 415


>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
          Length = 722

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 252/435 (57%), Positives = 320/435 (73%), Gaps = 23/435 (5%)

Query: 23  MEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           + G  S+ T+   K + D +  LY ELW  CAGPLV VPR G+RV+YFPQGH+EQ++AST
Sbjct: 8   LGGPGSSGTSQPEKGLKDDD--LYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQAST 65

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           +Q  +Q++P ++LP+KI CRV+N+QL AE DTDEV+A + LLPES+Q E     +P    
Sbjct: 66  DQELNQEIPHFNLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTE-PTNPDPNVSE 124

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
            P+   HSFCK LTASDTSTHGGFSVLR+HA ECLP LDM++  PTQELAAKDLHG EW+
Sbjct: 125 APKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWK 184

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           F+HI+RGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE+G+LRVGVRR  RQQ  +PSS
Sbjct: 185 FKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSS 244

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISS SMHLGVLATA HAV T TMF VYYKPRT  S+FIV  ++Y+E++ N +S+ MRFK
Sbjct: 245 VISSQSMHLGVLATASHAVMTRTMFLVYYKPRT--SQFIVGLNKYLEAVNNKFSLSMRFK 302

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           MRFEG+++PE+RF+GTIVG+ D     W +S+WR LKV+WDE +TIPRP+RVS W+IEP 
Sbjct: 303 MRFEGDDSPERRFSGTIVGVGDVSAG-WSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPF 361

Query: 383 LAPPALN-SLPMPRPKRPR-SNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           +A  ALN + P  + KR R +++L S               ++  S+A+GF       E 
Sbjct: 362 VASTALNVTQPAVKGKRSRPADVLSSG--------------SIFNSAASGFWYHGSSNEL 407

Query: 441 STLRGNFAERESNES 455
           S L G  AE +S E+
Sbjct: 408 SQL-GAAAEVQSKEN 421


>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
 gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
          Length = 676

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/419 (61%), Positives = 311/419 (74%), Gaps = 21/419 (5%)

Query: 33  SGVKR-VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           +GV R  G    AL+ ELWHACAGPLVTVPR+GE VYYFPQGH+EQ+EAST+Q  DQ +P
Sbjct: 4   AGVARGSGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLP 63

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSF 151
           +++LP KILC+V+NV+L+AE D+DEV+AQ+ L P++ Q E       PP P  R ++HSF
Sbjct: 64  LFNLPHKILCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPE-RCNIHSF 122

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHG  SVLRRHA+ECLP LDM++ PP QEL AKDLHGNEW FRHIFRGQP
Sbjct: 123 CKTLTASDTSTHG-LSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQP 181

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLL +GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR MRQ  N+PSSVISSHSMHL
Sbjct: 182 RRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHL 241

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           GVLATA HA+STGT+F+V+YKPRTS SEF+V  ++Y+E+  +  S+GMRFKMRFEG+E+P
Sbjct: 242 GVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESP 301

Query: 332 EQRFTGTIVGI-----EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
           E+RF+G I+G+         P  W +S+WR LKV+WDE S I RP+RVS W++EP     
Sbjct: 302 ERRFSGIIIGMGCMPANSTSP--WANSEWRSLKVQWDEPSAILRPDRVSPWEVEP----- 354

Query: 387 ALNSLPMPRPKRPRSNMLPSSPDSSVLTRE-----GSSKLNVDPSSATGFSRVLQGQEF 440
            LN      P+ P  N     P S  +  E     G  K   +P+ A  FS + + QE 
Sbjct: 355 -LNRTNPQPPQPPLRNKRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFSGLQRTQEL 412


>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
          Length = 695

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/364 (64%), Positives = 290/364 (79%), Gaps = 5/364 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LYTELW  CAGPLV VPR GE+VYYFPQGH+EQ+E+STNQ  +QQ+P+++LPSKILC V+
Sbjct: 22  LYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLFNLPSKILCSVV 81

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           +++L AE +TDEV+AQ+TL PE++Q E +   +P  P  P+  VH FCK LTASDTSTHG
Sbjct: 82  HIRLLAEQETDEVYAQITLHPEADQCEPS-SPDPCKPEAPKATVHWFCKILTASDTSTHG 140

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA ECLPPLDM++  PTQEL AKDLHG EW+F+HIFRGQPRRHLL +GWS FV
Sbjct: 141 GFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFV 200

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SKRLVAGDAF+FLRG+NGELR GVRR  RQQ  +PSSVISS SMHLGVLATA HA+ T 
Sbjct: 201 TSKRLVAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSVISSQSMHLGVLATASHALMTK 260

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           T+F VY KPRT  S+FI+   +Y+E+ K  +S+G RF+MRFEG+E+PE+RFTGTIV + D
Sbjct: 261 TLFVVYSKPRT--SQFIIGLSKYLEATKTKFSLGTRFRMRFEGDESPERRFTGTIVEVGD 318

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA-PPALNSLPMPRPKRPRSNM 403
             PQ W +SKWR LKV+WDE + + RP+RVS W IEP +A  P+  + PM + KRPR   
Sbjct: 319 LSPQ-WSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAPSNLAQPMVKSKRPRPVE 377

Query: 404 LPSS 407
           + SS
Sbjct: 378 ISSS 381


>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 662

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/377 (63%), Positives = 298/377 (79%), Gaps = 12/377 (3%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
           VGD +  LYT+LW  CAGPLV VPR+GERV+YFPQGH+EQ++ASTNQ  +Q++P ++LP 
Sbjct: 4   VGDGD--LYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHFNLPP 61

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           KILCRV+++QL AE +TDEV+A++TLLPESNQ+E     +P PP   +   H+F K LTA
Sbjct: 62  KILCRVVHIQLLAEQETDEVYARITLLPESNQEE-PTSPDPSPPETQKQVFHTFSKILTA 120

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHA ECLP LDM++  P+QEL A+DLHG EW+F+HIFRGQPRRHLL 
Sbjct: 121 SDTSTHGGFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQPRRHLLT 180

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS FV+SK+LVAGDAF+FLRGENGELRVGVRR  RQQ  +PSSVISS SMHLGVLATA
Sbjct: 181 TGWSTFVTSKKLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHLGVLATA 240

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
            HA  T TMF VYYKPRT  S+FI+  ++Y+E+  N +S+GMRFKMRFE E++PE+RF+G
Sbjct: 241 SHAFLTSTMFVVYYKPRT--SQFIIGVNKYLEAENNKFSVGMRFKMRFEVEDSPERRFSG 298

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SLPMPRP 396
           TIVG+ D  P  W +S+WR LKV+WDE + IPRPERVS W+IEP  A  ALN +  + + 
Sbjct: 299 TIVGVGDVSPG-WWNSQWRSLKVQWDEPAIIPRPERVSSWEIEPFAASTALNVTQQLVKS 357

Query: 397 KRPR-----SNMLPSSP 408
           KR R     S + P+SP
Sbjct: 358 KRSRTEVSSSEIAPNSP 374


>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
          Length = 629

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 228/359 (63%), Positives = 286/359 (79%), Gaps = 7/359 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ---VADQQMPVYDLPSKILC 101
           +Y ELW  CAGP+V VP+  ERV+YFPQGH+EQ+EAST Q         P++DLP KILC
Sbjct: 7   MYGELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTKPLFDLPPKILC 66

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           RV++V+L+AE DTDEV+AQ+ L+PE   DE  +  +P PP   R  VHSF K LTASDTS
Sbjct: 67  RVMDVRLQAEKDTDEVYAQIMLMPEGTVDE-PMSPDPSPPESQRPKVHSFSKVLTASDTS 125

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSVLR+HA ECLPPLDM++Q PTQEL A+D+HG +W+F+HIFRGQPRRHLL +GWS
Sbjct: 126 THGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWS 185

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            FV++KRLVAGD F+FLRGENGELRVGVRRA RQQ N+PSSVISSHSMHLGVLATA HA 
Sbjct: 186 TFVTAKRLVAGDTFVFLRGENGELRVGVRRANRQQTNMPSSVISSHSMHLGVLATACHAT 245

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
            T +MFTVYYKPRT  S+FI+  ++Y+E++ N +S+G+RFKMRFEGE++PE+RF+GT+VG
Sbjct: 246 QTRSMFTVYYKPRT--SQFIISLNKYLEAMSNKFSVGIRFKMRFEGEDSPERRFSGTVVG 303

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           ++D     W+DS WRCL+V WDE ++I RP++VS W+IEP +    +    MP+ KRPR
Sbjct: 304 VKDCSTH-WKDSNWRCLEVHWDEPASISRPDKVSPWEIEPFVTSENVPHSVMPKNKRPR 361


>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
 gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/385 (64%), Positives = 305/385 (79%), Gaps = 7/385 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LYTELW ACAGPLV VP+ GERV+YFPQGH+EQ+EASTNQ  +Q++P+++LPSKILCRVI
Sbjct: 3   LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRVI 62

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           + QL AE DTDEV+AQ+TL+PES+Q E          PP    VHSFCK LTASDTSTHG
Sbjct: 63  HTQLLAEQDTDEVYAQITLIPESDQIEPTSPDSSSSEPPRP-TVHSFCKVLTASDTSTHG 121

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA ECLPPLDM++  PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 122 GFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 181

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SKRLVAGD+F+FLRGENGELRVGVRR   QQ ++PSSVISS SMHLGVLATA HAVST 
Sbjct: 182 TSKRLVAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVSTL 241

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           T+F VYYKPRT  S+FI+  ++Y+E++ N + +GMRFKMRFEGE++P++RF+GTIVG+ED
Sbjct: 242 TLFVVYYKPRT--SQFIISLNKYLEAVSNKFVVGMRFKMRFEGEDSPDRRFSGTIVGVED 299

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA--PPALNSLPMPRPKRPRSN 402
             P  W DSKWR LKV+WDE + IPRP+RVS W+IEP +A  P  L+     + KRPR  
Sbjct: 300 FSPH-WNDSKWRSLKVQWDEPAPIPRPDRVSPWEIEPCVASVPTNLSQPVTQKNKRPRPP 358

Query: 403 M-LPSSPDSSVLTREGSSKLNVDPS 426
             +P+   S+ L+ +  +   +DPS
Sbjct: 359 FEIPALGYSTPLSSKSKNDAILDPS 383


>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
 gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
          Length = 405

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 232/368 (63%), Positives = 288/368 (78%), Gaps = 6/368 (1%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L  ELW  CAGPLV VP+  ERVYYFPQGH+EQ+EASTNQ  +Q +P+++L  KILC
Sbjct: 25  EDELCQELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLFNLQPKILC 84

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           RV+++QL AE D+DEV+AQ+ LLPE++Q E     +   P PPR  VH FCK LTASDTS
Sbjct: 85  RVLHIQLLAEQDSDEVYAQIALLPEADQVE-PTSPDLSLPEPPRPKVHFFCKVLTASDTS 143

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFS+LR+HA+ECLPPLDM++  P QEL AKDLHG EW F+HIFRGQPRRHLL +GWS
Sbjct: 144 THGGFSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLTTGWS 203

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            FVSSKRLV GD+F+FLR   GE+R+G+RR  RQ  ++P SVISS SMHLGVLATA HAV
Sbjct: 204 TFVSSKRLVTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGVLATASHAV 263

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           +T TMF VYYKPRT  S+FI+  ++Y+E++K+ YS+GMRFKM+FEGEE PE+RFTGTIVG
Sbjct: 264 TTQTMFVVYYKPRT--SQFIIGLNKYLEAVKHRYSVGMRFKMKFEGEEIPEKRFTGTIVG 321

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP--MPRPKRP 399
           +ED+  Q W+DSKWR LKV+WDE +++PRP+RVS W IEP +A  A   +P    + KR 
Sbjct: 322 VEDSSSQ-WKDSKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPPMGVKNKRH 380

Query: 400 RSNMLPSS 407
           R++  P S
Sbjct: 381 RAHNEPKS 388


>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 661

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 310/710 (43%), Positives = 389/710 (54%), Gaps = 104/710 (14%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C+
Sbjct: 20  ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA-----VEKEPPPPPPPRF----HVHSFCK 153
           ++N++LK EPDTDEV+AQ+TLLP+  QDEN       E+   PP  P      H+HSFCK
Sbjct: 80  LMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCK 139

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRR
Sbjct: 140 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRR 199

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVS+KRLVAGDAFIFLR    E  V   R                      
Sbjct: 200 HLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR---------------------- 237

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
                           YY                 ES+K NYSIGMRFKMRFEGEEA EQ
Sbjct: 238 ----------------YY-----------------ESLKRNYSIGMRFKMRFEGEEAAEQ 264

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+
Sbjct: 265 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 324

Query: 394 PRPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
            R KR RS  N LPS  D S +TRE +SK+  D S     +R L  Q  + L   +   +
Sbjct: 325 -RFKRSRSSVNALPS--DVSTVTREVTSKVMAD-SQQNSLTRALHNQGRTQLTVRY--HD 378

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD-- 509
           +++  T +   VW    + ++ + ++A  +   E W  P R    Y  + S F    D  
Sbjct: 379 NSDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWT-PTRSPEGYNQIFSAFKPLKDIH 436

Query: 510 ------PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
                 PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V 
Sbjct: 437 NPLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVM 494

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
            +G +      G   +    D+     +     H       +  S+  + A S  + P+ 
Sbjct: 495 PEGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQP 543

Query: 622 AMVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESD 676
            ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D
Sbjct: 544 LVLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVD 603

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC KV
Sbjct: 604 NCSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKV 652


>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 692

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/363 (65%), Positives = 290/363 (79%), Gaps = 8/363 (2%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  LY + W ACAGPLV VPR G+RV+YFPQGH+EQ+EASTNQ  +Q++P+  LP+KILC
Sbjct: 18  EDELYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILC 77

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           RV+NV L AE +TDEV+AQ+TL+PES+QDE     +P    PPR  VHSF K LTASDTS
Sbjct: 78  RVVNVHLLAEQETDEVYAQITLVPESSQDE-PTNADPCTAEPPRAPVHSFSKVLTASDTS 136

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSVLR+HA ECLP LDMS+  PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 137 THGGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 196

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            FV+SKRLVAGD F+FLRG+NGELRVGVRR  RQ  ++PSSVISS SMHLGVLATA HAV
Sbjct: 197 TFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHAV 256

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE--QRFTGTI 339
           +T T+F VYYKPRTS  +FI+  ++Y+E++   +S+GMRFKMRFEG+++ E  +RF+GTI
Sbjct: 257 ATQTLFVVYYKPRTS--QFIIGVNKYLEAMDKKFSVGMRFKMRFEGDDSAETDKRFSGTI 314

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL--PMPRPK 397
           VG+ED  P  W +SKWR LKV+WDE + +PRP+RVS W+IEP +A  +  S+   M + K
Sbjct: 315 VGVEDISPH-WVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTK 373

Query: 398 RPR 400
           RPR
Sbjct: 374 RPR 376


>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 777

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 309/710 (43%), Positives = 387/710 (54%), Gaps = 104/710 (14%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C+
Sbjct: 22  ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 81

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA-------VEKEPPPPPPPRF--HVHSFCK 153
           ++N++LK EPDTDEV+AQ+TLLP+  QDEN            PP  P      H+HSFCK
Sbjct: 82  LMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCK 141

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRR
Sbjct: 142 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRR 201

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVS+KRLVAGDAFIFLR    E  V   R                      
Sbjct: 202 HLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR---------------------- 239

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
                           YY                 ES+K NYSIGMRFKMRFEGEEA EQ
Sbjct: 240 ----------------YY-----------------ESLKRNYSIGMRFKMRFEGEEAAEQ 266

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+
Sbjct: 267 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 326

Query: 394 PRPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
            R KR RS  N LPS  D S +TRE +SK+  D S     +R L  Q  + L   +   +
Sbjct: 327 -RFKRSRSSVNALPS--DVSTVTREVTSKVMAD-SQQNSLTRALHNQGRTQLTVRY--HD 380

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD-- 509
           +++  T +   VW    + ++ + ++A  +   E W P  R    Y  + S F    D  
Sbjct: 381 NSDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWTPT-RSPEGYNQIFSAFKPLKDIH 438

Query: 510 ------PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
                 PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V 
Sbjct: 439 NPLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVM 496

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
            +G +      G   +    D+     +     H       +  S+  + A S  + P+ 
Sbjct: 497 PEGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQP 545

Query: 622 AMVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESD 676
            ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D
Sbjct: 546 LVLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVD 605

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC KV
Sbjct: 606 NCSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKV 654


>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 775

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 309/710 (43%), Positives = 387/710 (54%), Gaps = 104/710 (14%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C+
Sbjct: 20  ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA-------VEKEPPPPPPPRF--HVHSFCK 153
           ++N++LK EPDTDEV+AQ+TLLP+  QDEN            PP  P      H+HSFCK
Sbjct: 80  LMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCK 139

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRR
Sbjct: 140 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRR 199

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVS+KRLVAGDAFIFLR    E  V   R                      
Sbjct: 200 HLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR---------------------- 237

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
                           YY                 ES+K NYSIGMRFKMRFEGEEA EQ
Sbjct: 238 ----------------YY-----------------ESLKRNYSIGMRFKMRFEGEEAAEQ 264

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+
Sbjct: 265 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 324

Query: 394 PRPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
            R KR RS  N LPS  D S +TRE +SK+  D S     +R L  Q  + L   +   +
Sbjct: 325 -RFKRSRSSVNALPS--DVSTVTREVTSKVMAD-SQQNSLTRALHNQGRTQLTVRY--HD 378

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD-- 509
           +++  T +   VW    + ++ + ++A  +   E W P  R    Y  + S F    D  
Sbjct: 379 NSDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWTPT-RSPEGYNQIFSAFKPLKDIH 436

Query: 510 ------PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
                 PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V 
Sbjct: 437 NPLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVM 494

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
            +G +      G   +    D+     +     H       +  S+  + A S  + P+ 
Sbjct: 495 PEGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQP 543

Query: 622 AMVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESD 676
            ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D
Sbjct: 544 LVLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVD 603

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC KV
Sbjct: 604 NCSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKV 652


>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 652

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 309/710 (43%), Positives = 388/710 (54%), Gaps = 104/710 (14%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C+
Sbjct: 20  ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA-----VEKEPPPPPPPRF----HVHSFCK 153
           ++N++LK EPDTDEV+AQ+TLLP+  QDEN       E+   PP  P      H+HSFCK
Sbjct: 80  LMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCK 139

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRR
Sbjct: 140 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRR 199

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVS+KRLVAGDAFIFLR    E  V   R                      
Sbjct: 200 HLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR---------------------- 237

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
                           YY                 ES+K NYSIGMRFKMRFEGEEA EQ
Sbjct: 238 ----------------YY-----------------ESLKRNYSIGMRFKMRFEGEEAAEQ 264

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+
Sbjct: 265 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 324

Query: 394 PRPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
            R KR RS  N LPS  D S +TRE +SK+  D S     +R L  Q  + L   +   +
Sbjct: 325 -RFKRSRSSVNALPS--DVSTVTREVTSKVMAD-SQQNSLTRALHNQGRTQLTVRY--HD 378

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD-- 509
           +++  T +   VW    + ++ + ++A  +   E W  P R    Y  + S F    D  
Sbjct: 379 NSDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWT-PTRSPEGYNQIFSAFKPLKDIH 436

Query: 510 ------PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
                 PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V 
Sbjct: 437 NPLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVM 494

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
            +G +      G   +    D+     +     H       +  S+  + A S  + P+ 
Sbjct: 495 PEGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQP 543

Query: 622 AMVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESD 676
            ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D
Sbjct: 544 LVLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVD 603

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC K 
Sbjct: 604 NCSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKA 652


>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 669

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/369 (64%), Positives = 296/369 (80%), Gaps = 6/369 (1%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELW   AGPLV +PR  E+V YFPQGH+EQ+EASTNQ  +Q++P+++LP KILC+V++ +
Sbjct: 1   ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLFNLPXKILCQVVDTR 60

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS 167
           L AE D+DEV+AQ+TL+PE+NQ   +   EPP     +  VHSFCK LTASDTSTHGGFS
Sbjct: 61  LLAEQDSDEVYAQITLMPEANQALPST-FEPPLIECRKTKVHSFCKVLTASDTSTHGGFS 119

Query: 168 VLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSK 227
           VLR+HA ECLPPLDM++Q PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SK
Sbjct: 120 VLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 179

Query: 228 RLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMF 287
           RLVAGD+F+FLRGENGELRVGVRR  RQQ ++PSSVISSHSMHLGVLATA HAVST T F
Sbjct: 180 RLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRF 239

Query: 288 TVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADP 347
            VYYKPR   S+FIV   +YME++ N + +GMRFKMRFEGEE+PE+RF+GTIVG++D  P
Sbjct: 240 VVYYKPRA--SQFIVSLSKYMEAMNNKFMVGMRFKMRFEGEESPERRFSGTIVGVDDMSP 297

Query: 348 QRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP-PALNSLPMPRPKRPRSNM-LP 405
             W +S+WR L+V+WDE ++I RP+RVS W+IEP +AP P++      + KRPR  + +P
Sbjct: 298 H-WPNSEWRSLRVQWDELASIQRPDRVSPWEIEPFVAPTPSIPHSISVKNKRPRPPLEIP 356

Query: 406 SSPDSSVLT 414
            S +S+V T
Sbjct: 357 DSDNSTVTT 365


>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 691

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/382 (63%), Positives = 298/382 (78%), Gaps = 11/382 (2%)

Query: 23  MEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           M  + +N   +G    G+ EM  Y  LW  CAGPLV VPR G+RV+YFPQGH+EQ+EAST
Sbjct: 1   MLSRAANGEVAGSGYSGEDEM--YEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEAST 58

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           NQ  +Q++P+  LP+KILCRV+NV L AE +TDEV+AQ+TL+PESNQDE  +  +P    
Sbjct: 59  NQELNQRIPLLKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQDE-PMNPDPCTAE 117

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           PPR  VHSF K LTASDTSTHGGFSVLR+HA ECLP LDMS+  PTQEL AKDLHG EWR
Sbjct: 118 PPRAPVHSFSKVLTASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWR 177

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           F+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRG+NGELRVGVRR  RQ  ++PSS
Sbjct: 178 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSS 237

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VISS SMHLGVLATA HAV+T T+F VYYKPRT  S+FI+  ++Y+E++ N +S+GMR K
Sbjct: 238 VISSQSMHLGVLATASHAVATQTLFVVYYKPRT--SQFIISVNKYLEAM-NRFSVGMRLK 294

Query: 323 MRFEGEEAPE--QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           MRFEG+++ E  +RF+GTIVG+ED  P  W +SKWR LKV+WDE + +PRP+RVS W+IE
Sbjct: 295 MRFEGDDSAETDKRFSGTIVGVEDISPH-WVNSKWRSLKVQWDEPAAVPRPDRVSPWEIE 353

Query: 381 PALAPPALNSL--PMPRPKRPR 400
           P +A  +  S+   M + KRPR
Sbjct: 354 PFVASASTPSVQPTMVKTKRPR 375


>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 600

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 234/371 (63%), Positives = 287/371 (77%), Gaps = 9/371 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           LY+ELW ACAGPLV VPR  ERV+YFPQGH+EQ+ ASTNQ V DQ++PV++LP KILCRV
Sbjct: 18  LYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 77

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           ++V LKAE +TDEV+AQ+TL PE +Q E     +PP   P +  V SF K LTASDTSTH
Sbjct: 78  LSVMLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPTVDSFVKILTASDTSTH 136

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLP LDM++  PTQEL A+DLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 137 GGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 196

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           V+SKRLVAGDAF+FLRG+ G+LRVGVRR  +QQ  +P+SVISS SM LGVLATA HAV+T
Sbjct: 197 VTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTT 256

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            T+F V+YKPR   S+FI+  ++YM ++KN +S+GMRF+MRFEGEE+PE+ FTGTIVG  
Sbjct: 257 TTIFVVFYKPRI--SQFIISVNKYMVAMKNGFSLGMRFRMRFEGEESPERIFTGTIVGSG 314

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP---MPRPKRPR 400
           D   Q W  SKWR L+++WDE S+IPRP +VS W+IEP  +P AL   P     + KR R
Sbjct: 315 DLSSQ-WPASKWRSLQIQWDEPSSIPRPNKVSPWEIEP-FSPSALTPTPTQQQSKSKRSR 372

Query: 401 SNMLPSSPDSS 411
              +  SP +S
Sbjct: 373 PIEITGSPAAS 383


>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
 gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana]
 gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana]
 gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
 gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 622

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/376 (62%), Positives = 289/376 (76%), Gaps = 10/376 (2%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLP 96
           +G  +  LYTELW ACAGPLV VPR GERV+YFPQGH+EQ+ ASTNQ V DQ++PV++LP
Sbjct: 32  LGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLP 91

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
            KILCRV++V LKAE +TDEV+AQ+TL PE +Q E     +PP   P +  V SF K LT
Sbjct: 92  PKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPTVDSFVKILT 150

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSVLR+HA ECLP LDM++  PTQEL A+DLHG EWRF+HIFRGQPRRHLL
Sbjct: 151 ASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLL 210

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR  +QQ  +P+SVISS SM LGVLAT
Sbjct: 211 TTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLAT 270

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           A HAV+T T+F V+YKPR   S+FI+  ++YM ++KN +S+GMR++MRFEGEE+PE+ FT
Sbjct: 271 ASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFT 328

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTI+G  D   Q W  SKWR L+++WDE S+I RP +VS W+IEP  +P AL     P P
Sbjct: 329 GTIIGSGDLSSQ-WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP-FSPSALT----PTP 382

Query: 397 KRPRSNMLPSSPDSSV 412
            + +S    S P S +
Sbjct: 383 TQQQSKSKRSRPISEI 398


>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
 gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
 gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 601

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/375 (62%), Positives = 288/375 (76%), Gaps = 10/375 (2%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPS 97
           G  +  LYTELW ACAGPLV VPR GERV+YFPQGH+EQ+ ASTNQ V DQ++PV++LP 
Sbjct: 12  GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPP 71

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           KILCRV++V LKAE +TDEV+AQ+TL PE +Q E     +PP   P +  V SF K LTA
Sbjct: 72  KILCRVLSVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPTVDSFVKILTA 130

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLR+HA ECLP LDM++  PTQEL A+DLHG EWRF+HIFRGQPRRHLL 
Sbjct: 131 SDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLT 190

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR  +QQ  +P+SVISS SM LGVLATA
Sbjct: 191 TGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATA 250

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
            HAV+T T+F V+YKPR   S+FI+  ++YM ++KN +S+GMR++MRFEGEE+PE+ FTG
Sbjct: 251 SHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTG 308

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI+G  D   Q W  SKWR L+++WDE S+I RP +VS W+IEP  +P AL     P P 
Sbjct: 309 TIIGSGDLSSQ-WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP-FSPSALT----PTPT 362

Query: 398 RPRSNMLPSSPDSSV 412
           + +S    S P S +
Sbjct: 363 QQQSKSKRSRPISEI 377


>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
 gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
 gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
 gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
 gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
 gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 638

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 229/357 (64%), Positives = 283/357 (79%), Gaps = 4/357 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM-PVYDLPSKILCRV 103
           LY ELW  CAGPLV VP+  ERVYYFPQGH+EQ+EAST QV    M P++ LP KILC V
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AE DTDEV+AQ+TL+P   + +  +  +P PP   R  VHSF K LTASDTSTH
Sbjct: 69  MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLPPLDM++Q PTQEL A+D+HG +W+F+HIFRGQPRRHLL +GWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           V+SKRLVAGD F+FLRGENGELRVGVRRA  QQ ++PSSVISSHSMHLGVLATA HA  T
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            TMF VYYKPRT  S+FI+  ++Y+E++ N +S+GMRFKMRFEGE++PE+R++GT++G++
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVK 306

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           D  P  W+DSKWRCL+V WDE ++I RP +VS W+IEP +    +    M + KRPR
Sbjct: 307 DCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 362


>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 636

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 229/357 (64%), Positives = 283/357 (79%), Gaps = 4/357 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM-PVYDLPSKILCRV 103
           LY ELW  CAGPLV VP+  ERVYYFPQGH+EQ+EAST QV    M P++ LP KILC V
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AE DTDEV+AQ+TL+P   + +  +  +P PP   R  VHSF K LTASDTSTH
Sbjct: 69  MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLPPLDM++Q PTQEL A+D+HG +W+F+HIFRGQPRRHLL +GWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           V+SKRLVAGD F+FLRGENGELRVGVRRA  QQ ++PSSVISSHSMHLGVLATA HA  T
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            TMF VYYKPRT  S+FI+  ++Y+E++ N +S+GMRFKMRFEGE++PE+R++GT++G++
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVK 306

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           D  P  W+DSKWRCL+V WDE ++I RP +VS W+IEP +    +    M + KRPR
Sbjct: 307 DCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLKNKRPR 362


>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 228/357 (63%), Positives = 281/357 (78%), Gaps = 4/357 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM-PVYDLPSKILCRV 103
           LY ELW  C+GPLV VP+  ERVYYFPQGH+EQ+EAST QV    M P++ LP KILC V
Sbjct: 7   LYDELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 66

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AE DTDEV+AQ+TL+P   + +     +P PP   R  VHSF K LTASDTSTH
Sbjct: 67  MNVSLQAEKDTDEVYAQITLIPVGTEVDGPTSPDPSPPELQRPKVHSFSKVLTASDTSTH 126

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLPPLDM++Q PTQEL A+D+HG +W+F+HIFRGQPRRHLL +GWS F
Sbjct: 127 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 186

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           V+SKRLVAGD F+FLRGE GELRVGVRRA RQQ ++PSSVISSHSMHLGVLATA HA  T
Sbjct: 187 VTSKRLVAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATARHATQT 246

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            TMF VYYKPRT  S+FI+  ++Y+E++ N +S+GMRFKMRFEGE++PE+R++GT++G+ 
Sbjct: 247 KTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVN 304

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           D  P  W+DSKWRCL+V WDE ++I RP +VS W+IEP +    +    M + KRPR
Sbjct: 305 DCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVTSENVPKSVMLKNKRPR 360


>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
          Length = 584

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/372 (63%), Positives = 281/372 (75%), Gaps = 8/372 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           LY ELW ACAGPLV VPR  ERV+YFPQGH+EQ+ ASTNQ V D+ +PV++LP KILCRV
Sbjct: 9   LYMELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVFNLPPKILCRV 68

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV LKAE +TDEV+AQ+TL PE +Q E     +PP   P +  V SF K LTASDTSTH
Sbjct: 69  LNVMLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLTEPAKQTVDSFVKILTASDTSTH 127

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLPPLDM++  PTQEL A+DLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 128 GGFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 187

Query: 224 VSSKRLVAGDAFIFLRG-ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           V+SKRLVAGDAF+FLRG + G+LRVGVRR  +QQ  +P+SVISS SMHLGVLATA HA +
Sbjct: 188 VTSKRLVAGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLGVLATASHAFN 247

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
           T TMF V YKPR   S+FI+  ++YM ++K  + IGMRF+MRFEGEE+PE+ FTGTIVG 
Sbjct: 248 TTTMFVVLYKPRI--SQFIISVNKYMAAMKKGFGIGMRFRMRFEGEESPERIFTGTIVGT 305

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D  PQ W  SKWR L+V+WDE+ST+ RP +VS W+IEP L      S   P  K  RS 
Sbjct: 306 GDLSPQ-WPASKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQPYSKSKRSR 364

Query: 403 MLPSSPDSSVLT 414
             P  P  S +T
Sbjct: 365 --PIDPSVSEIT 374


>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
          Length = 601

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/375 (62%), Positives = 288/375 (76%), Gaps = 10/375 (2%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPS 97
           G  +  LYTELW ACAGPLV VPR GERV+YFPQGH+EQ+ ASTNQ V DQ++PV++LP 
Sbjct: 12  GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPP 71

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           KILCRV++V LKAE +TDEV+AQ+TL PE +Q E     +PP   P +  V SF K LTA
Sbjct: 72  KILCRVLSVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPAVDSFVKILTA 130

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLR+HA ECLP LDM++  PTQEL A+DLHG EWRF+HIFRGQPRRHLL 
Sbjct: 131 SDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLT 190

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR  +QQ  +P+SVISS SM LGVLATA
Sbjct: 191 TGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATA 250

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
            HAV+T T+F V+YKPR   S+FI+  ++YM ++KN +S+GMR++MRFEGEE+PE+ FTG
Sbjct: 251 SHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTG 308

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI+G  D   Q W  SKWR L+++WDE S+I RP +VS W+IEP  +P AL     P P 
Sbjct: 309 TIIGSGDLSSQ-WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP-FSPSALT----PTPT 362

Query: 398 RPRSNMLPSSPDSSV 412
           + +S    S P S +
Sbjct: 363 QQQSKSKRSRPISEI 377


>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
 gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
 gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
 gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
 gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
 gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 602

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/360 (64%), Positives = 280/360 (77%), Gaps = 8/360 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           LYTELW  CAGPLV VPR  ERV+YFPQGH+EQ+ ASTNQ +  +++PV+DLP KILCRV
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRV 81

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           ++V LKAE +TDEV+AQ+TL PE +Q E     +PP   P +   HSF K LTASDTSTH
Sbjct: 82  LDVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPIVGPTKQEFHSFVKILTASDTSTH 140

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLP LDM++  PTQEL  +DLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 141 GGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 200

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAF+FLRGENG+LRVGVRR  R Q  +P+SVISS SMHLGVLATA HAV T
Sbjct: 201 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRT 260

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            T+F V+YKPR   S+FIV  ++YME+IK+ +S+G RF+MRFEGEE+PE+ FTGTIVG  
Sbjct: 261 TTIFVVFYKPRI--SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSG 318

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS---LPMPRPKRPR 400
           D   Q W  SKWR L+V+WDE +T+ RP++VS W+IEP LA   +++    P  + KR R
Sbjct: 319 DLSSQ-WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSR 377


>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 664

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/367 (64%), Positives = 286/367 (77%), Gaps = 8/367 (2%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
            G  E  LY +LW ACAGP V VPR G+RV+YFPQGH+EQ+E STNQ  +Q++P++ L S
Sbjct: 8   CGGEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLSS 67

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           KILCRV+NV L AE +TDEV+AQ+TL+PESNQ E     +P P   PR  VHSFCK LTA
Sbjct: 68  KILCRVVNVHLLAEQETDEVYAQITLVPESNQTE-PTSPDPCPAELPRPRVHSFCKVLTA 126

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLR+HA ECLP LDMS+  PTQEL AKDL G EWRF+HIFRGQPRRHLL 
Sbjct: 127 SDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQPRRHLLT 186

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS FV+SKRLVAGD F+FLRG NGELRVGVRR    Q ++PSSVISS SMHLGVLATA
Sbjct: 187 TGWSTFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVISSQSMHLGVLATA 246

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE--QRF 335
            HAV+T T+F VYYKPRT  S+FIV  ++Y+E+I    ++GMRFKMRFEG+E+PE  +RF
Sbjct: 247 SHAVATQTLFVVYYKPRT--SQFIVSVNKYLEAINQKCNVGMRFKMRFEGDESPENDKRF 304

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP-PALNSLP-M 393
           +GTI+G+ED  P  W +S WR LKV+WDE ++ PRP+RVS W+IE  LA  P  +S P +
Sbjct: 305 SGTILGVEDISPH-WVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPTTSSQPAV 363

Query: 394 PRPKRPR 400
            + KRPR
Sbjct: 364 IKNKRPR 370


>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
          Length = 555

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/372 (63%), Positives = 283/372 (76%), Gaps = 10/372 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           LYTELW ACAGPLV VP  GE+V+YFPQGH+EQ+ ASTNQ +  +++P + LP KILCRV
Sbjct: 21  LYTELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVASTNQGIESEEIPDFKLPPKILCRV 80

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           ++V LKAE DTDEV+AQ+TL PE +Q E     +PP   P +   HSF K LTASDTSTH
Sbjct: 81  LSVMLKAEHDTDEVYAQITLKPEEDQSE-LTSLDPPLVEPTKQMFHSFVKILTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLP LDM +  PTQEL  +DLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 140 GGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAF+FLRGENG+LRVGVRR  R Q  +P+SVISS SMHLGVLATA HAV T
Sbjct: 200 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVVT 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            T+F V+YKPR   S+FIV  ++YME++K+ +S+G RF+MRFEGEE+PE+ FTGTIVGI 
Sbjct: 260 KTIFLVFYKPRI--SQFIVGVNKYMEAMKHGFSLGTRFRMRFEGEESPERMFTGTIVGIG 317

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL-APPALNSLPMPRPKRPRSN 402
           D   Q W  S WR L+V+WDE +T  RP+RVS W+IEP L +PP        +PK  RS 
Sbjct: 318 DLSSQ-WPASTWRSLQVQWDEPTTFQRPDRVSPWEIEPFLSSPPVSTPAQQSQPKCKRSR 376

Query: 403 MLPSSPDSSVLT 414
            +    +SSVLT
Sbjct: 377 PV----ESSVLT 384


>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
          Length = 559

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/476 (54%), Positives = 321/476 (67%), Gaps = 26/476 (5%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYD 94
           +R G  +  LY ELW ACAGPLV VPR GERV+YFPQGH+EQ+ A TNQ V DQ++P ++
Sbjct: 9   RRSGSYDDQLYMELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALTNQGVVDQEIPDFN 68

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKT 154
           LP KILCRV++V LKAE +TDEV+AQ+TL PE +Q E     +PP   P +  V SF K 
Sbjct: 69  LPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKQSVDSFVKI 127

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSVLR+HA ECLP LDM +   TQEL A+DLHG EWRF+HIFRGQPRRH
Sbjct: 128 LTASDTSTHGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWRFKHIFRGQPRRH 187

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+SKRLVAGDAF+FLRG+ G+LRVGVRR  RQQ  +P+SVISS SMHLGVL
Sbjct: 188 LLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLARQQSTMPASVISSQSMHLGVL 247

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           ATA HAV+T T+F V+YKPR   S+FI+  ++YM ++K  + IGMRF+MRFEGEE+PE+ 
Sbjct: 248 ATASHAVNTKTLFVVFYKPRI--SQFIIGVNKYMAAMKIGFPIGMRFRMRFEGEESPERI 305

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           FTGTIVG  D   Q W  SKWR L+++WDE ST+ RP +VS W+IEP  +P  L     P
Sbjct: 306 FTGTIVGTGDLSSQ-WPASKWRSLQIQWDEPSTVQRPNKVSTWEIEP-FSPSVLT----P 359

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATG---FSRVLQGQEFSTLRGNF---- 447
            P +P+S    S P +S       S+++   +  TG    S  L     S+LR  F    
Sbjct: 360 TPTQPQSKSKRSRPINSSSVSVIRSRVSSCIAEITGSPIASTFLSLDSNSSLRLLFQDPS 419

Query: 448 AERESNESDTAEKSVVWPPSLDDEKID--VVSASRRYGSENWVPPGRHEPVYTDLL 501
            ER SN+        V+P  L  +K +  V S  R +G +    P    PV  D L
Sbjct: 420 TERNSNKP-------VFPSGLQCKKTETPVTSCCRLFGFDLMSKPASTAPVPPDKL 468


>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/365 (63%), Positives = 282/365 (77%), Gaps = 6/365 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           LYTELW ACAGPLV VP  GERV+YFPQGH+EQ+ ASTNQ +  +++P + LP KILC+V
Sbjct: 21  LYTELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQGIESEKIPDFKLPPKILCQV 80

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           ++V LKAE DTDEV+AQ+TL PE +Q E     +PP   P +   HSF K LTASDTSTH
Sbjct: 81  LSVMLKAEHDTDEVYAQITLKPEEDQSE-PTSLDPPIVEPTKQMFHSFVKILTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLP LDM++  PTQEL  +DLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 140 GGFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAF+FLRGENG+LRVGVRR  R Q  +P+SVISS SMHLGVLATA HAV+T
Sbjct: 200 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQNTMPASVISSQSMHLGVLATASHAVNT 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            TMF V+YKPR   S+FIV  ++YME++K+ +S+G RF+MRFEGEE+PE+ FTGTIVGI 
Sbjct: 260 QTMFLVFYKPRI--SQFIVSVNKYMEAMKHGFSLGTRFRMRFEGEESPERIFTGTIVGIG 317

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL-APPALNSLPMPRPKRPRSN 402
           D   Q W  S WR L+V+WDE +T+ RP++VS W+IEP L + PA       +PK  RS 
Sbjct: 318 DLSSQ-WPASTWRSLQVQWDEPTTVQRPDKVSPWEIEPFLPSSPASTPSQQSQPKSKRSK 376

Query: 403 MLPSS 407
            + SS
Sbjct: 377 PIESS 381


>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 771

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 306/710 (43%), Positives = 383/710 (53%), Gaps = 108/710 (15%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCR 102
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQVEASTNQ+A+QQ  P+Y+LP KI C+
Sbjct: 20  ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA-------VEKEPPPPPPPRF--HVHSFCK 153
           ++N++LK EPDTDEV+AQ+TLLP+  QDEN            PP  P      H+HSFCK
Sbjct: 80  LMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCK 139

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHG EWRFRHIFRGQPRR
Sbjct: 140 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRR 199

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLLQSGWSVFVS+KRLVAGDAFIFLR    E  V   R                      
Sbjct: 200 HLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR---------------------- 237

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
                           YY                 ES+K NYSIGMRFKMRFEGEEA EQ
Sbjct: 238 ----------------YY-----------------ESLKRNYSIGMRFKMRFEGEEAAEQ 264

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           RFTGTIVGI  +DP  W DSKWR LKVRWDE S+I RPERVS W+IEP+++P  +N LP+
Sbjct: 265 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 324

Query: 394 PRPKRPRS--NMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERE 451
            R KR RS  N LPS  D S +TRE  +      S     +R L  Q  + L   +   +
Sbjct: 325 -RFKRSRSSVNALPS--DVSTVTREVMAD-----SQQNSLTRALHNQGRTQLTVRY--HD 374

Query: 452 SNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANAD-- 509
           +++  T +   VW    + ++ + ++A  +   E W P  R    Y  + S F    D  
Sbjct: 375 NSDVKTTQDLTVWSSGTEQQR-NNIAAQTKLCLEGWTPT-RSPEGYNQIFSAFKPLKDIH 432

Query: 510 ------PSH--GFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVP 561
                 PS   G  S   D    R  V  Q+  ++++   WSL P     +M + N  V 
Sbjct: 433 NPLGPFPSQISGTHSNSWDTADARYPV--QQANYSMLPGTWSLRPHNSGFRMNQQNYLVM 490

Query: 562 VQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKS 621
            +G +      G   +    D+     +     H       +  S+  + A S  + P+ 
Sbjct: 491 PEGANFT----GKSAFTSLQDHGTDKCSTGCFGH-------IESSSHTDHASSSLIRPQP 539

Query: 622 AMVQDQ-EAGKSKDCKLFGIPLFSNH----VMPEPVVSHRNTMNEPAGNLDQQFRAFESD 676
            ++ +  +  K    KLFGIPL S      ++  P V++   +         Q    E D
Sbjct: 540 LVLGNGVQKSKGTSFKLFGIPLGSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEVD 599

Query: 677 QKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             S  SK+ K  D  Q  +  E  +QPS   T ++++K Q  STRSC KV
Sbjct: 600 NCSHPSKTVKPLDGPQSDSITEN-NQPSPEATLNIQNKVQSSSTRSCKKV 648


>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
 gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
          Length = 795

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/430 (57%), Positives = 308/430 (71%), Gaps = 14/430 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL +E+WHACAGPLV +PR G+RV YFPQGHIEQV ASTNQ AD QMP Y+LPS+I CR+
Sbjct: 32  ALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNLPSQIYCRL 91

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +N+ L A+ +TDEVFAQ+TL+PE+ Q + +++ E    P P+  +  FCK LT+SDTSTH
Sbjct: 92  LNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCPKRKLSMFCKNLTSSDTSTH 151

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A+ECLPPLD  + PP QEL AKDLHG EW+FRHI+RGQPRRHLL +GWSVF
Sbjct: 152 GGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVF 211

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP-SSVISSHSMHLGVLATAWHAVS 282
           VS K+LVAGDA +FLRG+NGELR+GVRRA+RQQ +V  SS++SSHSMHLGVLA A HAVS
Sbjct: 212 VSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAAAHAVS 271

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
           T TMFT++Y PR SP+EF+VPY +Y+++  +N S+GMRFKMRFE EE+ E+R+ GTI G+
Sbjct: 272 TKTMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERRYMGTITGV 331

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D D  RW +SKWRCL+V WDE +   R ERVS W+IEP +AP   N     R K+ R  
Sbjct: 332 GDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIAPNVANPPTTQRVKKFR-- 389

Query: 403 MLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSV 462
             P++P +   T     K N D + A    R LQG     +     E     S  A    
Sbjct: 390 --PNTPANEFPT----GKNNSDSAQAMHM-RALQGSHALGMPSKEEEGLRGSSPFA---- 438

Query: 463 VWPPSLDDEK 472
           VWP + DD K
Sbjct: 439 VWPYNRDDLK 448


>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 608

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/423 (57%), Positives = 299/423 (70%), Gaps = 19/423 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           LYTELW  CAGPLV VPR  ERV+YFPQGH+EQ+ ASTNQ +  +++PV+DLP KILCRV
Sbjct: 22  LYTELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVFDLPPKILCRV 81

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           + + LKAE +TDEV+AQ+TL PE +Q E     +PP   P +   HSF K LTASDTSTH
Sbjct: 82  LGITLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPTKQMFHSFVKILTASDTSTH 140

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLP LDM++  PTQEL  +DLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 141 GGFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 200

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAF+FLRGENG+LRVGVRR  R Q  +P+SVISS SMHLGVLATA HAV T
Sbjct: 201 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRT 260

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ---------- 333
            T+F V+YKPR   S+FIV  ++YME+IK+ +S+G RF+MRFEGEE+PE+          
Sbjct: 261 TTIFVVFYKPRI--SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETWSV 318

Query: 334 -RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
            RFTGTIVG  D   Q W  SKWR L+V+WDE +T+ RP++VS W+IEP LA   + S P
Sbjct: 319 FRFTGTIVGTGDLSSQ-WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPI-STP 376

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERES 452
             +P+       P+ P  SV+T    S L   P S    +  L+  +  +L  N     S
Sbjct: 377 AQQPQLKCKRSRPTEP--SVITPAPPSFLYSLPQSQDSINASLKLFQDPSLERNSGGYSS 434

Query: 453 NES 455
           N S
Sbjct: 435 NNS 437


>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 584

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/358 (63%), Positives = 285/358 (79%), Gaps = 7/358 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LY ELW ACAGPLV +PR  ERV+YFPQGH+EQ+EASTN   ++++P+++L SKILCRVI
Sbjct: 24  LYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRIPLFNLDSKILCRVI 83

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           +++  A+ ++DEV+AQ+TL+PESNQ+E     +P PP PPR  VHSFCK LTASDTSTHG
Sbjct: 84  HIEPLADHESDEVYAQITLMPESNQNEPK-SMDPCPPEPPRPVVHSFCKVLTASDTSTHG 142

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA ECLPPLDM+   PTQ+L AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 143 GFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 202

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SKRL AGD+F+FLRG+NGELRVGVRR  RQQ ++P SVISS SMHLGVLATA HAV+T 
Sbjct: 203 TSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTTQ 262

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           T F VYYKPRT   +FI+  ++Y+E++ N +S+GMRF M FEGE++PE+RF+GTI+G  D
Sbjct: 263 TRFVVYYKPRT--CQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIGAVD 320

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP--RPKRPR 400
             P  W +S WR L+V+WDE ++I RP+RVS W IEP L   A+  L  P  + KRPR
Sbjct: 321 ISPH-WPNSSWRSLRVQWDEQTSILRPDRVSPWDIEP-LTSSAVTGLSQPXFKNKRPR 376


>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 664

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/366 (64%), Positives = 282/366 (77%), Gaps = 8/366 (2%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G  E  LY +LW ACAGP V VPR G+RV+YFPQGH+EQ+E STNQ  +Q++P++ LPSK
Sbjct: 8   GGEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPSK 67

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
           ILCRV+NV L AE +TDEV+AQ+TL+PESNQ E  +  +P P   P   VHSFCK LTAS
Sbjct: 68  ILCRVVNVHLLAEQETDEVYAQITLVPESNQAE-PMSPDPCPAELPSPRVHSFCKVLTAS 126

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLR+HA ECLP LDMS+  PTQEL AKDL G EWRF+HIFRGQPRRHLL +
Sbjct: 127 DTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRHLLTT 186

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+SKRLVAGD F+FLRG NGELRVGVRR    Q ++PSSVISS SMHLGVLATA 
Sbjct: 187 GWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGVLATAS 246

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE--QRFT 336
           HAV+T T+F VYYKPR   S+FIV  ++Y+E+I    ++GMRFK RFEG+E+PE  +RF+
Sbjct: 247 HAVATQTLFVVYYKPRA--SQFIVSVNKYLEAINQKCNVGMRFKTRFEGDESPENYKRFS 304

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA--PPALNSLPMP 394
           GTIVG+ED  P  W +S WR LKV+WDE ++ PRP+RV  W+IEP LA  P   +     
Sbjct: 305 GTIVGVEDISPH-WVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSSQTAAI 363

Query: 395 RPKRPR 400
           + KRPR
Sbjct: 364 KNKRPR 369


>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
          Length = 613

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/371 (62%), Positives = 281/371 (75%), Gaps = 19/371 (5%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           LYTELW  CAGPLV VPR  ERV+YFPQGH+EQ+ ASTNQ +  +++PV+DLP KILCRV
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRV 81

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           ++V LKAE +TDEV+AQ+TL PE +Q E     +PP   P +   HSF K LTASDTSTH
Sbjct: 82  LDVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPIVGPTKQEFHSFVKILTASDTSTH 140

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLP LDM++  PTQEL  +DLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 141 GGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 200

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSKRLVAGDAF+FLRGENG+LRVGVRR  R Q  +P+SVISS SMHLGVLATA HAV T
Sbjct: 201 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRT 260

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ---------- 333
            T+F V+YKPR   S+FIV  ++YME+IK+ +S+G RF+MRFEGEE+PE+          
Sbjct: 261 TTIFVVFYKPRI--SQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETWNV 318

Query: 334 -RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS-- 390
            RFTGTIVG  D   Q W  SKWR L+V+WDE +T+ RP++VS W+IEP LA   +++  
Sbjct: 319 FRFTGTIVGSGDLSSQ-WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPA 377

Query: 391 -LPMPRPKRPR 400
             P  + KR R
Sbjct: 378 QQPQSKCKRSR 388


>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
          Length = 912

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/503 (51%), Positives = 327/503 (65%), Gaps = 56/503 (11%)

Query: 32  TSGVK----RVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQ---------- 77
           TSG K    R+   + ++ +ELWHACAGPL+++P +G  V YFPQGH+EQ          
Sbjct: 12  TSGSKEFGTRITACQSSICSELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFG 71

Query: 78  ------------------------VEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPD 113
                                   V AS  Q  DQQ P Y+LP +ILCRV+NV L A+ +
Sbjct: 72  FDSPLKFTPPVAPVLEKTAVASMHVAASIKQGVDQQTPPYNLPPQILCRVLNVNLHADQE 131

Query: 114 TDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHA 173
            DEV+AQ+TL+PES + E  +E++ P       H+  FCKTLTASDTSTHGGFSV RR A
Sbjct: 132 MDEVYAQLTLVPESEKSEKCMEEQVPASTSCTPHM--FCKTLTASDTSTHGGFSVPRRAA 189

Query: 174 DECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGD 233
           ++C PPLD ++Q P+QEL AKDLHG EWRFRHIFRGQPRRHLL +GWSVFVS+KRLV+GD
Sbjct: 190 EDCFPPLDYTQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGD 249

Query: 234 AFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKP 293
           A +FLRGENGELR+G+RRA RQQ    SSV+SS SMHLGVL  A HAV+T +MF +++ P
Sbjct: 250 AVLFLRGENGELRLGIRRASRQQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNP 309

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDS 353
           RTSP+EF++PY +Y++S  +  +IGMRFKMRFE E+A E+R+TGTI GI D +P RW  S
Sbjct: 310 RTSPAEFVIPYHKYVKSFNHPLAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARWPGS 369

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           KWR LKV WDE +   R ERVS W+IEP ++   LN    PR KR R++  P+S D   L
Sbjct: 370 KWRSLKVEWDEHAANERQERVSPWEIEPFISSTGLNIPAGPRIKRLRTSFQPTSTD---L 426

Query: 414 TREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKI 473
                 +L VD   ++ F +VLQGQE S L+ +F    S+  D+ +  V      D +  
Sbjct: 427 CIPDGGRL-VDFGESSRFQKVLQGQEISPLKASFI---SSGGDSVKHHV-----RDYKGQ 477

Query: 474 DVVS----ASRRYGSENWVPPGR 492
           DVVS     SR    + W PPGR
Sbjct: 478 DVVSKPFGGSRSGRRDIWSPPGR 500


>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
 gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
          Length = 666

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/357 (64%), Positives = 284/357 (79%), Gaps = 9/357 (2%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELW A AGPLV VP  G+ V+YFPQGH+EQ+EASTNQ  +Q++PV  LP+KILCR++N+ 
Sbjct: 19  ELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVLKLPTKILCRIVNIH 78

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS 167
           L AE +TDEV+AQ+TL+PESNQ+E  +  +PP    PR  +HSFCK LTASDTSTHGGFS
Sbjct: 79  LLAEQETDEVYAQITLVPESNQNEPTI-PDPPTEELPRPKIHSFCKILTASDTSTHGGFS 137

Query: 168 VLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSK 227
           VLR+HA ECLPPLDMS+  PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SK
Sbjct: 138 VLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 197

Query: 228 RLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMF 287
           RLVAGD F+FL GENGELRVGVRR  RQ  ++PSSVISS SMHLGVLATA HAV+T T+F
Sbjct: 198 RLVAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVISSQSMHLGVLATASHAVATQTLF 256

Query: 288 TVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE--QRFTGTIVGIEDA 345
            VYYKPRT  S+FIV  ++Y+ ++ N +++GMRF+MRFE +++ E  +RF+GTIVG+ED 
Sbjct: 257 VVYYKPRT--SQFIVSVNKYLSAVSNKFAVGMRFRMRFESDDSAESDKRFSGTIVGVEDI 314

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL--PMPRPKRPR 400
            P  W +SKWR LKV+WDE S I RP+RVS W+IEP ++  +  ++     + KRPR
Sbjct: 315 SPH-WANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVSSASTATVQPTAAKTKRPR 370


>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
 gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
          Length = 396

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/362 (62%), Positives = 284/362 (78%), Gaps = 4/362 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL +E+WHACAGPLV +PR G+RV YFPQGHIEQV ASTNQ AD QMP Y+LPS+I CR+
Sbjct: 32  ALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNLPSQIYCRL 91

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +N+ L A+ +TDEVFAQ+TL+PE+ Q + +++ E    P P+  +  FCK LT+SDTSTH
Sbjct: 92  LNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCPKRKLSMFCKNLTSSDTSTH 151

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A+ECLPPLD  + PP QEL AKDLHG EW+FRHI+RGQPRRHLL +GWSVF
Sbjct: 152 GGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVF 211

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP-SSVISSHSMHLGVLATAWHAVS 282
           VS K+LVAGDA +FLRG+NGELR+GVRRA+RQQ +V  SS++SSHSMHLGVLA A HAVS
Sbjct: 212 VSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAAAHAVS 271

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
           T TMFT++Y PR SP+EF+VPY +Y+++  +N S+GMRFKMRFE EE+ E+R+ GTI G+
Sbjct: 272 TKTMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERRYMGTITGV 331

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D D  RW +SKWRCL+V WDE +   R ERVS W+IEP +AP   N    P  +R R+ 
Sbjct: 332 GDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIAPNVANP---PTTQRARTT 388

Query: 403 ML 404
            +
Sbjct: 389 QI 390


>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
 gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/344 (63%), Positives = 269/344 (78%), Gaps = 7/344 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST-----NQVADQQMPVYDLPSKI 99
           LYTELWHACAGPLV VPR G++V+YFPQGH+EQV  ST     N+    +MP+YDLP KI
Sbjct: 2   LYTELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIYDLPYKI 61

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPR-FHVHSFCKTLTAS 158
           LC+V++V+LKAE  TDEVFA++TLLP + +DE +  K+    P  R     SF K LT S
Sbjct: 62  LCKVVHVELKAEAGTDEVFARITLLPVAEEDELSSNKDGKSLPLHRKTCARSFTKKLTPS 121

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DT THGGFSV +RHAD+CLPPLD S+QPP QEL AKDLHG EW F+HI+RGQP+RHL+ S
Sbjct: 122 DTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKRHLITS 181

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FVSSKRLVAGD+FIFLRGE+GELRVGVRRAM+ + N+ ++++SSHSM LG+L++A 
Sbjct: 182 GWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSMQLGILSSAS 241

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA++TG+MFT+Y+ P TSP+EFI+PYDQYM+S + +YS G RF+M FEGEE  EQRF GT
Sbjct: 242 HAITTGSMFTIYFHPWTSPAEFIIPYDQYMKSAEIDYSAGTRFRMLFEGEECAEQRFEGT 301

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETST-IPRPERVSLWKIEP 381
           +VG ED D  RW +S+WR LKV+WD  S      ERVS W IEP
Sbjct: 302 VVGTEDVDHIRWPNSEWRILKVKWDAASEPFVHQERVSPWNIEP 345


>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
          Length = 602

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/340 (64%), Positives = 275/340 (80%), Gaps = 4/340 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y ELW   AGPLV VP+  ERVYYFPQGH+EQ+EAST Q  +   P++DLP KILCRV+
Sbjct: 1   MYEELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLFDLPPKILCRVM 60

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           NV+L+AE DTDEV+AQ+ L+PE   DE  +  +P PP   +   HSF K LTASDTSTHG
Sbjct: 61  NVRLQAEKDTDEVYAQIMLMPEGTVDE-PMSPDPSPPELQKPKFHSFTKVLTASDTSTHG 119

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA ECLPPLDM++Q PTQEL A+D+HG +W+F+HIFRGQPRRHLL +GWS FV
Sbjct: 120 GFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLLTTGWSTFV 179

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SK+LVAGD F+FLRGENGELRVGVRRA RQQ ++PSSVISSHSMHLGVLATA HA  T 
Sbjct: 180 TSKKLVAGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATACHATQTR 239

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           +MFTVYYKPRT  S+FI+   +Y+E++ + +S+GMRFKMRFEG+++PE+RF+GT+VG++D
Sbjct: 240 SMFTVYYKPRT--SQFILSLHKYLEAMNSKFSVGMRFKMRFEGDDSPERRFSGTVVGVQD 297

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
             P  W+DSKWR L V WDE ++  RP++VS W++EP  A
Sbjct: 298 CSPH-WKDSKWRSLIVNWDEPASFTRPDKVSPWEMEPFAA 336


>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
          Length = 920

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/516 (50%), Positives = 334/516 (64%), Gaps = 46/516 (8%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVE---------------------------- 79
           ELWHACAGPL+++P +G RV YFPQGH+EQ+                             
Sbjct: 38  ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVTPMAEEASS 97

Query: 80  --------ASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE 131
                   +S +Q  +QQM  Y LP +ILCRV+NV L A+ + DEV+AQ+TL+P+S + E
Sbjct: 98  AASLNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKSE 157

Query: 132 NAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 191
             +E++ P PP    H+  FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL
Sbjct: 158 KCIEEQLPVPPSSTPHM--FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQEL 215

Query: 192 AAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 251
            AKDLHG EWRFRHIFRGQPRRHLL +GWSVFVS KRLVAGDA +FLR ENGELR+G+RR
Sbjct: 216 VAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIRR 275

Query: 252 AMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI 311
           A +QQ +VPSSV+SSH +H GVLA   HAV+T +MF ++Y PRTSP+EF++PY +Y++S 
Sbjct: 276 ASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIFYNPRTSPTEFVIPYHKYVKSF 335

Query: 312 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
            +++SIGMRFKMRFE E+A E+R+TGTIVGI D DP RW +S+WR  KV WDE +   R 
Sbjct: 336 NHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSEWRSFKVGWDEHAAQERQ 395

Query: 372 ERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGF 431
           ERVS W+IEP  +   LN+LP PR KR R++   +  D S+   +  S    D   ++ F
Sbjct: 396 ERVSPWEIEPFTSATGLNALPGPRVKRLRTSFPTAPTDLSIPDGDTLS----DFGESSRF 451

Query: 432 SRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPG 491
            +VLQGQE S L+  F    ++  D  +  V    +LD E  +V   +RR G E W P G
Sbjct: 452 QKVLQGQEMSPLKTPF---RTDIMDLMKYRVCDSKALDTEH-EVSGGARRTGHEIWPPSG 507

Query: 492 RHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKS 527
           R +   +  LS         +G  +P +   P  KS
Sbjct: 508 RTDISPSSDLSCDKRKYGRLYGLETPSSINCPSAKS 543


>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
          Length = 919

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 270/561 (48%), Positives = 354/561 (63%), Gaps = 56/561 (9%)

Query: 34  GVKRVG-DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVE------------- 79
           G KR+G +   ++  ELWHACAGPL+++P +G RV YFPQGH+EQ+              
Sbjct: 23  GDKRIGVETGSSVCPELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHRGGRGSFL 82

Query: 80  -----------------------ASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDE 116
                                  +S +Q  +QQM  Y LP +ILCRV+NV L A+ + DE
Sbjct: 83  NVNHAAAPMAEEASSAAALNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDE 142

Query: 117 VFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADEC 176
           V+AQ+TL+P+S ++E  +E++   PP    H+  FCKTLTASDTSTHGGFSV RR A++C
Sbjct: 143 VYAQLTLVPDSEKNEKCMEEQLSVPPSSTPHM--FCKTLTASDTSTHGGFSVPRRAAEDC 200

Query: 177 LPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFI 236
            PPLD S+Q P+QEL AKDLHG EWRFRHIFRGQPRRHLL +GWSVFVS KRLVAGDA +
Sbjct: 201 FPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVL 260

Query: 237 FLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTS 296
           FLR ENGELR+G+RRA +QQ +VPSSV+SSH +H GVLA   HAV+T +MF +YY PRTS
Sbjct: 261 FLRDENGELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIYYNPRTS 320

Query: 297 PSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWR 356
           P+EF++PY +Y++S  +++SIGMRFKMRFE E+A E+R+TGTIVGI D DP RW +S+WR
Sbjct: 321 PTEFVIPYHKYVKSFNHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSRWR 380

Query: 357 CLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTRE 416
             KV WDE +   R +RVS W+IEP  +   LN+LP PR KR R++  PS+P + +   +
Sbjct: 381 SFKVGWDEHAAQERQDRVSPWEIEPFTSATGLNALPGPRVKRLRTS-FPSAP-TDLSIPD 438

Query: 417 GSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVV 476
           G +  +   SS   F +VLQGQE S L+  F    ++  D  +  V    +LD E  ++ 
Sbjct: 439 GDTLSDFGESSR--FQKVLQGQEMSPLKTPF---RTDIMDFMKYRVSDSKALDTEH-EIS 492

Query: 477 SASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKS--------- 527
             +RR G E W P GR +   +  LS         +G  +P +   P  KS         
Sbjct: 493 GGARRGGPEIWPPSGRTDISPSSDLSCDKRKYGQLYGLETPSSINCPSAKSPDTNQQLRY 552

Query: 528 VLDQEGKFNLVARPWSLMPSG 548
                G+ N VA P S  PS 
Sbjct: 553 FTQLHGRENGVALPLSNGPSA 573


>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
 gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
          Length = 644

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/341 (64%), Positives = 272/341 (79%), Gaps = 3/341 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELW  CAGP+V VPREGERVYYFPQGH+EQ+ AS NQ  DQ++P ++L SK+LCRV
Sbjct: 9   ALYHELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSFNLKSKVLCRV 68

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           IN    AE D DEV+ Q+TL+PE+         +P  P   +   HSFCK LTASDTSTH
Sbjct: 69  INSHFLAEEDNDEVYVQITLMPEAPHVPEPTTPDPLIPQDVKPRFHSFCKVLTASDTSTH 128

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA+ECLPPLD+++Q PTQEL AKDLH  EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 129 GGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRHLLTTGWSTF 188

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LVAGD+F+FLRG NG+LRVGV+R +RQQ ++PSSV+SS SMHLGVLATA HAV+T
Sbjct: 189 VSSKKLVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGVLATASHAVTT 248

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            TMF VYYKPRT  ++FIV  ++Y+E++K+ Y++GMRFKM+FE E  P++RF GTIVGI+
Sbjct: 249 QTMFVVYYKPRT--TQFIVGVNKYLEALKHEYAVGMRFKMQFEAEGNPDRRFMGTIVGID 306

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           D   Q W++S WR LKVRWDE + I RP+RVS W+I+P + 
Sbjct: 307 DLSSQ-WKNSAWRSLKVRWDEPAAIARPDRVSPWEIKPYVC 346


>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 688

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/358 (62%), Positives = 280/358 (78%), Gaps = 13/358 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LY ELW ACAGPLV +PR  ERV+YFPQ      +ASTN   ++++P+++L SKILCRVI
Sbjct: 27  LYMELWRACAGPLVDIPRVDERVFYFPQ------QASTNLELNKRIPLFNLDSKILCRVI 80

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           +++  A+ ++DEV+AQ+TL+PESNQ+E     +P PP PPR  VHSFCK LTASDTSTHG
Sbjct: 81  HIEPLADHESDEVYAQITLMPESNQNEPK-SMDPCPPEPPRPVVHSFCKVLTASDTSTHG 139

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSVLR+HA ECLPPLDM+   PTQ+L AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 140 GFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 199

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SKRL AGD+F+FLRG+NGELRVGVRR  RQQ ++P SVISS SMHLGVLATA HAV+T 
Sbjct: 200 TSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTTQ 259

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
           T F VYYKPRT   +FI+  ++Y+E++ N +S+GMRF M FEGE++PE+RF+GTI+G  D
Sbjct: 260 TRFVVYYKPRT--CQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIGAVD 317

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL--PMPRPKRPR 400
             P  W +S WR L+V+WDE ++I RP+RVS W IEP L   A+  L  P+ + KRPR
Sbjct: 318 ISPH-WPNSSWRSLRVQWDEQTSILRPDRVSPWDIEP-LTSSAVTGLSQPISKNKRPR 373


>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
          Length = 958

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/435 (53%), Positives = 298/435 (68%), Gaps = 30/435 (6%)

Query: 28  SNSTTSGVKRVGDPEM---ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST-N 83
           SN + +G + +G   +   ++  ELWHACAGPL+++PR+G  V YFPQGH+EQV  S  +
Sbjct: 12  SNGSFNGNEDMGGAALNKTSICLELWHACAGPLISLPRKGSLVVYFPQGHMEQVTTSLKH 71

Query: 84  QVADQ-QMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE------------SNQD 130
           Q  +Q QM  YDLP +I CRV+NV L A+ +TDEV+AQVTL+PE             +++
Sbjct: 72  QCLEQRQMRPYDLPPQIFCRVLNVNLHADQETDEVYAQVTLVPEPEPAEKDLEEEEEDEE 131

Query: 131 ENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE 190
              + K  P         H FCKTLTASDTSTHGGFSV RR A++C PPLD ++Q P+QE
Sbjct: 132 AGVLNKSTP---------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQE 182

Query: 191 LAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVR 250
           L AKDLHG EWRFRHI+RGQPRRHLL +GWSVFV+ K L++GDA +FLRGENGELR+G+R
Sbjct: 183 LVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSVFVNHKGLMSGDAVLFLRGENGELRLGIR 242

Query: 251 RAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 310
           RA RQQ  +PSSV+SS SMHLGVLA+A +AV+T +MF ++Y PR SP+EF++PY +Y++S
Sbjct: 243 RAARQQSVIPSSVLSSQSMHLGVLASAANAVATKSMFHIFYNPRASPAEFLIPYHKYVKS 302

Query: 311 IKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPR 370
                SIGMRFKMRFE E+  E+R+TG I GI D DP +W  SKWR L V WDE +   +
Sbjct: 303 CNLPLSIGMRFKMRFETEDTAERRYTGIITGIGDVDPAKWPGSKWRSLMVGWDEHAANEQ 362

Query: 371 PERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATG 430
            ERVS W+IEP ++   LN     R KR +++ LPS+P     T +G   L  D   +  
Sbjct: 363 QERVSPWEIEPCISVAGLNVSSGTRIKRLKTS-LPSTP-VDFATPDGGRLL--DFGESVR 418

Query: 431 FSRVLQGQEFSTLRG 445
           F +VLQGQE    R 
Sbjct: 419 FQKVLQGQEMMPFRA 433


>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
 gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
 gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
 gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
 gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
 gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 699

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/373 (56%), Positives = 279/373 (74%), Gaps = 10/373 (2%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLP 96
           VGDPE  L+ ELW ACAGPLV VP+  ERV+YF QGH+EQ++  T+  +  +Q+ ++ +P
Sbjct: 10  VGDPE--LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVP 67

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
            KILC+V+NV+LKAE +TDEVFAQ+TL P+ +Q+      +PP P  PR  VHSFCK LT
Sbjct: 68  YKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILT 127

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SDTSTHGGFSVLRRHA+ECLPPLDMS   PTQEL  KDLHG+EWRF+HI+RGQPRRHLL
Sbjct: 128 PSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLL 187

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWS FV+SK+L++GDAF++LR E GE RVGVRR +++Q  +P+SVISS SMHLGVLA+
Sbjct: 188 TTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 247

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           A HA+ T ++F VYY+PR S S++IV  ++Y+ + K  +++GMRFKM FEGE+ P ++F+
Sbjct: 248 ASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFS 307

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE------PALAPPALNS 390
           GTIVG  D   Q W  S+W+ LKV+WDE + +  PERVS W+IE      PA+  P  ++
Sbjct: 308 GTIVGEGDLSLQ-WSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQSA 366

Query: 391 LPMPRPKRPRSNM 403
               RP+ P   +
Sbjct: 367 TKNKRPREPSETI 379


>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
          Length = 695

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/373 (56%), Positives = 279/373 (74%), Gaps = 10/373 (2%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLP 96
           VGDPE  L+ ELW ACAGPLV VP+  ERV+YF QGH+EQ++  T+  +  +Q+ ++ +P
Sbjct: 6   VGDPE--LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVP 63

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
            KILC+V+NV+LKAE +TDEVFAQ+TL P+ +Q+      +PP P  PR  VHSFCK LT
Sbjct: 64  YKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILT 123

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SDTSTHGGFSVLRRHA+ECLPPLDMS   PTQEL  KDLHG+EWRF+HI+RGQPRRHLL
Sbjct: 124 PSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLL 183

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWS FV+SK+L++GDAF++LR E GE RVGVRR +++Q  +P+SVISS SMHLGVLA+
Sbjct: 184 TTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 243

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           A HA+ T ++F VYY+PR S S++IV  ++Y+ + K  +++GMRFKM FEGE+ P ++F+
Sbjct: 244 ASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFS 303

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE------PALAPPALNS 390
           GTIVG  D   Q W  S+W+ LKV+WDE + +  PERVS W+IE      PA+  P  ++
Sbjct: 304 GTIVGEGDLSLQ-WSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQSA 362

Query: 391 LPMPRPKRPRSNM 403
               RP+ P   +
Sbjct: 363 TKNKRPREPSETI 375


>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
          Length = 699

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/373 (56%), Positives = 278/373 (74%), Gaps = 10/373 (2%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLP 96
           VGDPE  L+  LW ACAGPLV VP+  ERV+YF QGH+EQ++  T+  +  +Q+ ++ +P
Sbjct: 10  VGDPE--LFAVLWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVP 67

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
            KILC+V+NV+LKAE +TDEVFAQ+TL P+ +Q+      +PP P  PR  VHSFCK LT
Sbjct: 68  YKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILT 127

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SDTSTHGGFSVLRRHA+ECLPPLDMS   PTQEL  KDLHG+EWRF+HI+RGQPRRHLL
Sbjct: 128 PSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLL 187

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWS FV+SK+L++GDAF++LR E GE RVGVRR +++Q  +P+SVISS SMHLGVLA+
Sbjct: 188 TTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 247

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           A HA+ T ++F VYY+PR S S++IV  ++Y+ + K  +++GMRFKM FEGE+ P ++F+
Sbjct: 248 ASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFS 307

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE------PALAPPALNS 390
           GTIVG  D   Q W  S+W+ LKV+WDE + +  PERVS W+IE      PA+  P  ++
Sbjct: 308 GTIVGEGDLSLQ-WSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQSA 366

Query: 391 LPMPRPKRPRSNM 403
               RP+ P   +
Sbjct: 367 TKNKRPREPSETI 379


>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
 gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
          Length = 667

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/326 (65%), Positives = 261/326 (80%), Gaps = 7/326 (2%)

Query: 77  QVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK 136
           Q+EASTNQ   QQ+P ++LPSKILCRV+++ L AE +TDEV+AQ+TL PE +Q E     
Sbjct: 66  QLEASTNQELTQQIPKFNLPSKILCRVVHIHLLAEQETDEVYAQITLHPEVDQTEPTSPD 125

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           +  P P  R  VHSFCK LTASDTSTHGGFSVLR+HA ECLPPLDM++  PTQEL AKDL
Sbjct: 126 QCTPEPQKR-PVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAKDL 184

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLR +NGELRVGVRR  RQQ
Sbjct: 185 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGELRVGVRRLARQQ 244

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
             +PSSVISS SMHLGVLATA HAV+T T+F VYYKPRT  S+FI+  ++Y+E++ + +S
Sbjct: 245 SPMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRT--SQFIIGLNKYLEAVNHGFS 302

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +GMRFKMRFEGE++PE+RF GTIVG+ D  P+ W  SKWR LK++WDE +T+ RP+RVS 
Sbjct: 303 LGMRFKMRFEGEDSPERRFMGTIVGVGDFSPE-WSGSKWRSLKIQWDEPATVQRPDRVSP 361

Query: 377 WKIEPALAPPALNSLP--MPRPKRPR 400
           W+IEP  A  ++N LP  + + KRPR
Sbjct: 362 WEIEPFAASASVN-LPQTVGKSKRPR 386


>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
          Length = 686

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/365 (56%), Positives = 276/365 (75%), Gaps = 6/365 (1%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLPSK 98
           DPE  L+ ELW ACAGPLV +P+  ERV+YF QGH+EQ++  T+  +  +Q+ ++ +P+K
Sbjct: 8   DPE-ELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNK 66

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
           ILC+V+NV+LKAE +TDE++AQ+TL PE +Q +     EPP     R  VHSFCK LT S
Sbjct: 67  ILCKVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPS 126

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLRRHA+ECLP LDMS   PTQEL  KDLHG+EWRF+HI+RGQPRRHLL +
Sbjct: 127 DTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTT 186

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+SK+L+AGDAF++LR E G+ RVGVRR +++Q  +P+SVISS SMHLGVLA+A 
Sbjct: 187 GWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASAS 246

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ T ++F VYY+PR S S++IV  ++Y+ES K  + +GMRFKM FEG++ P ++F+GT
Sbjct: 247 HAIRTHSIFLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGT 306

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP---R 395
           +V   D  PQ W+ S+W+ LKV+WDE + +  PERVS W+IEP  A     ++P+    +
Sbjct: 307 VVDKGDLSPQ-WQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPVQPSMK 365

Query: 396 PKRPR 400
            KRPR
Sbjct: 366 NKRPR 370


>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
 gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
          Length = 688

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/365 (58%), Positives = 276/365 (75%), Gaps = 7/365 (1%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLPSK 98
           DPE  L+ ELW ACAGPLV +P+  ERV+YF QGH+EQ++  T+  +   Q+ ++ +P+K
Sbjct: 6   DPE--LFAELWRACAGPLVELPQTDERVFYFLQGHLEQLQEPTDPALLADQIKMFQVPNK 63

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
           ILC+V+NV+LKAE +TDE++AQ+TL PE +Q +     +PP P   R  VHSFCK LT S
Sbjct: 64  ILCKVVNVELKAETETDEMYAQITLQPEPDQMDLPTLPDPPLPETSRPVVHSFCKILTPS 123

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLRRHA+ECLPPLDMS   PTQEL  KDLHG+EWRF+HI+RGQPRRHLL +
Sbjct: 124 DTSTHGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTT 183

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+SK+L+AGDAF++LR E GE RVGVRR +++Q  +P+SVISS SMHLGVLA+A 
Sbjct: 184 GWSTFVTSKKLIAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASAS 243

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ T ++F VYY+PR S S++IV  ++Y+ES K  +++GMRFKM FEGE+ P ++F+GT
Sbjct: 244 HAIKTNSIFLVYYRPRLSQSQYIVSLNKYLESSKIGFNVGMRFKMSFEGEDVPVKKFSGT 303

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA-PPALN--SLPMPR 395
           +V   D  P  W+ S W+ LKV+WDE +    PERVS W+IEP  A  PA+N    P  +
Sbjct: 304 VVDKGDLSPH-WQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASAPAINIPVQPSMK 362

Query: 396 PKRPR 400
            KRPR
Sbjct: 363 NKRPR 367


>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
 gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
          Length = 686

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/365 (56%), Positives = 276/365 (75%), Gaps = 6/365 (1%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLPSK 98
           DPE  L+ ELW ACAGPLV +P+  ERV+YF QGH+EQ++  T+  +  +Q+ ++ +P+K
Sbjct: 8   DPE-ELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNK 66

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
           ILC+V+NV+LKAE +TDE++AQ+TL PE +Q +     EPP     R  VHSFCK LT S
Sbjct: 67  ILCKVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPS 126

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLRRHA+ECLP LDMS   PTQEL  KDLHG+EWRF+HI+RGQPRRHLL +
Sbjct: 127 DTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTT 186

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+SK+L+AGDAF++LR E G+ RVGVRR +++Q  +P+SVISS SMHLGVLA+A 
Sbjct: 187 GWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASAS 246

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ T ++F VYY+PR S S++IV  ++Y+ES K  + +GMRFKM FEG++ P ++F+GT
Sbjct: 247 HAIRTHSIFLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGT 306

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP---R 395
           +V   D  PQ W+ S+W+ LKV+WDE + +  PERVS W+IEP  A     ++P+    +
Sbjct: 307 VVDKGDLSPQ-WQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPVQPSMK 365

Query: 396 PKRPR 400
            KRPR
Sbjct: 366 NKRPR 370


>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 763

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/376 (55%), Positives = 281/376 (74%), Gaps = 12/376 (3%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSK 98
           DPE  L+ ELW ACAGPLV VP+ GERV+YF QGH+EQ++  T+  +  +Q+ ++ +P K
Sbjct: 67  DPE--LFAELWRACAGPLVEVPQRGERVFYFLQGHLEQLQEPTDSALLAEQIKMFQVPYK 124

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
           ILC+V+NV+LKAE +TDEV+AQ+TL P+++Q +  +  +P  P  PR  VH+FCK LT S
Sbjct: 125 ILCKVVNVELKAETETDEVYAQITLQPDADQSDLPLILDPTLPETPRPVVHTFCKILTPS 184

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLRRHA+ECLPPLDM+   PTQE+ +KDLHG+EWRF+HI+RGQPRRHLL +
Sbjct: 185 DTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTT 244

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+SK+L+AGDAF++LR E GE RVGVRR +++Q  +P+SVISS SMHLGVLA+A 
Sbjct: 245 GWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASAS 304

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ T ++F VYY+PR S S++IV  ++Y  + K  +++GMRF+M FE E+ P ++F GT
Sbjct: 305 HAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDVPVKKFFGT 364

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPR-PERVSLWKIE------PALAPPALNSL 391
           IVG  D  PQ W  S+W+ LKV+WD++  I   PERVS W+I+      PA++    +S 
Sbjct: 365 IVGDGDFSPQ-WSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAISTLLQSSA 423

Query: 392 PMPRPKRPRSNM-LPS 406
              RP+    NM LPS
Sbjct: 424 KNKRPRETNENMNLPS 439


>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 641

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/339 (64%), Positives = 273/339 (80%), Gaps = 6/339 (1%)

Query: 78  VEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE 137
           +EASTNQ  +Q++P+++LP KILC+V++ +L AE D+DEV+AQ+TL+PE+NQ   +   E
Sbjct: 3   LEASTNQELNQKLPLFNLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPST-FE 61

Query: 138 PPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLH 197
           PP     +  VHSFCK LTASDTSTHGGFSVLR+HA ECLPPLDM++Q PTQEL AKDLH
Sbjct: 62  PPLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLH 121

Query: 198 GNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 257
           G EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD+F+FLRGENGELRVGVRR  RQQ 
Sbjct: 122 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQS 181

Query: 258 NVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSI 317
           ++PSSVISSHSMHLGVLATA HAVST T F VYYKPR   S+FIV   +YME++ N + +
Sbjct: 182 SMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRA--SQFIVSLSKYMEAMNNKFMV 239

Query: 318 GMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLW 377
           GMRFKMRFEGEE+PE+RF+GTIVG++D  P  W +S+WR L+V+WDE ++I RP+RVS W
Sbjct: 240 GMRFKMRFEGEESPERRFSGTIVGVDDMSPH-WPNSEWRSLRVQWDELASIQRPDRVSPW 298

Query: 378 KIEPALAP-PALNSLPMPRPKRPRSNM-LPSSPDSSVLT 414
           +IEP +AP P++      + KRPR  + +P S +S+V T
Sbjct: 299 EIEPFVAPTPSIPHSISVKNKRPRPPLEIPDSDNSTVTT 337


>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
 gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
          Length = 781

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/370 (59%), Positives = 268/370 (72%), Gaps = 13/370 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           L +E WHACAGPLV +P  G+RV YFPQGHIEQV ASTNQ  AD Q+P Y+LPS+I CRV
Sbjct: 72  LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRV 131

Query: 104 INVQLKAEPDTDEVFAQVTLLPE--------SNQDENAVEKEPPPPPPPRFHVHSFCKTL 155
           +N+ L A  +TDEV+AQ+TL+PE        S+Q  +   +   P    +  +  FCK L
Sbjct: 132 LNLSLGAYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTASSKAKLSMFCKNL 191

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           T+SDTSTHGGFSV RR A+EC P LD  + PP QE+ AKDLHG EW+FRHI+RGQPRRHL
Sbjct: 192 TSSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRHL 251

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-QQGNVPSSVISSHSMHLGVL 274
           L +GWSVFVS K+LVAGD  +F+RG+NGELR+G+RRA+R Q     SS++SSHSM +GVL
Sbjct: 252 LTTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVL 311

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           A A HAVST TMFTV+Y PR SP+EF+VPY +Y++S K N  IGMRFKMRFE E++ E+R
Sbjct: 312 AAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERR 371

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           + GTI GI D DP RW  SKWR LKV WDE +   R ERVS W+IEP +AP   N  P  
Sbjct: 372 YMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAP---NVTPPV 428

Query: 395 RPKRPRSNML 404
             KR R  ML
Sbjct: 429 STKRFRPTML 438


>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
 gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
          Length = 620

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/359 (59%), Positives = 266/359 (74%), Gaps = 8/359 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ALY ELW ACAGPLVT+PREGERVYYFPQGHIEQ+ A   Q ++ QM   +LPSKILC+V
Sbjct: 44  ALYKELWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQQQSEHQMASLNLPSKILCKV 103

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           INVQ KAEP TD+V+AQ+ LLPE  Q  + +  +PP P P R  VHSF + LT SD S+H
Sbjct: 104 INVQCKAEPITDQVYAQIMLLPEPEQI-DVISPDPPLPEPERCVVHSFRRILTVSDISSH 162

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
             F V ++HA+ CLPPLDMS+Q P QEL A DL+GN+W F+HIF+G+  +HLL +GWS F
Sbjct: 163 DHFFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQHIFQGKSNKHLLTTGWSAF 222

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VSSK+LV+GD FIFLRGENGELRVGVRR M ++ N+ SS  S+   H  +LA A +A+ST
Sbjct: 223 VSSKKLVSGDMFIFLRGENGELRVGVRRLMGRKTNILSSATSNQIRH-SLLAVASYAIST 281

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           G++F V+Y+PRTS SEFIV  ++Y+E+  + + IGMRF MRFEGEE P +R  GTIV +E
Sbjct: 282 GSLFCVFYEPRTSRSEFIVSVNKYIEARNHKFCIGMRFLMRFEGEEVPIERINGTIVSME 341

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            +   RW DS+WRC KVRWDE S I  PERVS W++E      + +S P+PR KR RS+
Sbjct: 342 TSP--RWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENI----SSSSQPVPRTKRSRSS 394


>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
          Length = 709

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/433 (50%), Positives = 293/433 (67%), Gaps = 22/433 (5%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-----MPVYDLPSKI 99
           +  ELWHACAGPL+ +P++G  V YFPQGH+EQV A+++     +     M  YDLP +I
Sbjct: 47  ICLELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTYDLPPQI 106

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDE----NAVEKEPPPPPPPRFHV-HSFCKT 154
            CRV++V+L A+ + D+V+AQVTLLPE   +E    N  E E          + H FCKT
Sbjct: 107 FCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFCKT 166

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RGQPRRH
Sbjct: 167 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRH 226

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFV+ K LV+GDA +FLRGE+GELR+G+RRA R   ++P SV+SS  +HL +L
Sbjct: 227 LLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLSIL 286

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           + A +A+ST +MF V+Y PR SPSEF++PY +Y++S+    SIGMRFKMR E E++ E+R
Sbjct: 287 SPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAEKR 346

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            TG I G  D DP RW +SKWRCL VRWD++S + R ERVS W+IEP+L+ PAL+    P
Sbjct: 347 CTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSCPVAP 406

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNE 454
           R KR ++ ++         T +G + L    +  +   +VLQGQE            S+ 
Sbjct: 407 RIKRLQTCLMS--------TLDGMNPLEFAETVRS--HKVLQGQENVAFAPTLY--RSDP 454

Query: 455 SDTAEKSVVWPPS 467
           +D   +  +W PS
Sbjct: 455 TDNYSEFKIWNPS 467


>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
 gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
          Length = 774

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/364 (60%), Positives = 269/364 (73%), Gaps = 8/364 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRV 103
           L +E WHACAGPLV +P  G+RV YFPQGHIEQV ASTNQ  AD Q+P Y+LPS+I CRV
Sbjct: 72  LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRV 131

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +N+ L A  +TDEV+AQ+TL+PE+ Q + ++E + P     +  +  F K LT+SDTSTH
Sbjct: 132 LNLSLGAYRETDEVYAQMTLVPENEQLDQSLELDEPTASS-KAKLSMFSKNLTSSDTSTH 190

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A+EC P LD  + PP QE+ AKDLHG EW+FRHI+RGQPRRHLL +GWSVF
Sbjct: 191 GGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVF 250

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMR-QQGNVPSSVISSHSMHLGVLATAWHAVS 282
           VS K+LVAGD  +F+RG+NGELR+G+RRA+R Q     SS++SSHSM +GVLA A HAVS
Sbjct: 251 VSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAAHAVS 310

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ--RFTGTIV 340
           T TMFTV+Y PR SP+EF+VPY +Y++S K N  IGMRFKMRFE E++ E+  R+ GTI 
Sbjct: 311 TKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERSVRYMGTIT 370

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           GI D DP RW  SKWR LKV WDE +   R ERVS W+IEP +AP   N  P    KR R
Sbjct: 371 GIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAP---NVTPPVSTKRFR 427

Query: 401 SNML 404
             ML
Sbjct: 428 PTML 431


>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
 gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
          Length = 810

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/406 (50%), Positives = 281/406 (69%), Gaps = 15/406 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++Y ELWHACAGPL ++P++G  V YFPQGH+EQV A ++  +  +MP +DL  +I C+V
Sbjct: 43  SIYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-APSSPFSPMEMPTFDLQPQIFCKV 101

Query: 104 INVQLKAEPDTDEVFAQVTLLPE----------SNQDENAVEKEPPPPPPPRFHVHSFCK 153
           +NVQL A  + DEV+ Q+ LLP+             +E  V++E     P +   H FCK
Sbjct: 102 VNVQLLANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKSTPHMFCK 161

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EWRFRHI+RGQPRR
Sbjct: 162 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 221

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS+FVS K LV+GDA +FLRGE+GELR+G+RRA+R +  +P SVI   + +  V
Sbjct: 222 HLLTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNSYPSV 281

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           L+   +A+ST +MF V Y PR S ++F+VPY +YM+SI N   IG RFKMRFE +++PE+
Sbjct: 282 LSVVANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNPVCIGTRFKMRFEMDDSPER 341

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R +G + GI D +P RW +SKWRCL VRWDE       ERVS W+I+P+++ P L+    
Sbjct: 342 RCSGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSVSLPPLSIQSS 401

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           PR K+ R+++  + PD+ +    G   L+ + S  +  S+VLQGQE
Sbjct: 402 PRLKKLRTSLQATPPDNPITG--GGGFLDFEESGRS--SKVLQGQE 443


>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 793

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/410 (51%), Positives = 276/410 (67%), Gaps = 25/410 (6%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQ  AS +  +  +MP YDL  +I CRV+N
Sbjct: 48  YIELWHACAGPLTSLPKKGNVVVYFPQGHLEQA-ASFSPFSPMEMPTYDLQPQIFCRVVN 106

Query: 106 VQLKAEPDTDEVFAQVTLLPES---------------NQDENAVEKEPPPPPPPRFHVHS 150
           +QL A  + DEV+ QVTLLP++                 DE   E  P    P     H 
Sbjct: 107 IQLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTP-----HM 161

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EW+FRHI+RGQ
Sbjct: 162 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYRGQ 221

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS+FVS K LV+GDA +FLRGENGELR+G+RRA R +  +P S++ S S +
Sbjct: 222 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGSQSYY 281

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
              L++  +A+S  +MF V+Y PR S ++F VPY +Y++SIKN  +IG RFKM+FE +E+
Sbjct: 282 PNFLSSVANAISAKSMFHVFYSPRASHADFAVPYQKYIKSIKNPVTIGTRFKMKFEMDES 341

Query: 331 PEQRFT-GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           PE+R T G + G+ D DP +W  SKWRCL VRWDE   I   +RVS W+++P+ + P L+
Sbjct: 342 PERRCTSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDPSASLPPLS 401

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
                R K+ R  +L ++P+   LT  GSS   +D   +   S+VLQGQE
Sbjct: 402 IQSSRRLKKLRPGLLAAAPNH--LTTVGSSGF-MDSEESVRSSKVLQGQE 448


>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
          Length = 905

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/404 (53%), Positives = 279/404 (69%), Gaps = 17/404 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ--VADQQMPVYDLPSKILC 101
           ++  ELWHACAGPL+++P++G  V YFPQGHIEQ+ ++  Q       M  YDLP +I C
Sbjct: 36  SICMELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQIFC 95

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPE------SNQDENAVEKEPPPPPPPRFHVHSFCKTL 155
           RV+NV L A+ +TDEVFAQVTL+PE      + QDE          P     +H FCKTL
Sbjct: 96  RVLNVNLLADQETDEVFAQVTLVPEPEPVGDNFQDEENQNASVLSKPT----LHMFCKTL 151

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSV RR A++C PPLD ++Q P+QEL AKDLHG EW+FRHI+RGQPRRHL
Sbjct: 152 TASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQPRRHL 211

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           L +GWSVFVS K L    A +FLRGENGELR+G+RR  R+  +VPSSV S  +++L V+A
Sbjct: 212 LTTGWSVFVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVYLSVIA 271

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
            A +AV+T +MF ++Y PR SP+EFI+PY +Y+ S K +  +G RF+M+FE E+  E+R+
Sbjct: 272 AATNAVATKSMFHIFYNPRASPAEFIIPYQKYVRSCKQSLLVGTRFRMKFESEDTAEKRY 331

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
           TG +  I DADP +W  SKWR LKV WDE S   R ERVS W+IEP++A   +N     R
Sbjct: 332 TGIVTSIGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEPSIAVSGVNVSSGTR 391

Query: 396 PKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
            KR R+N LP S D+   T +G  +L+ D   +   S+VLQGQE
Sbjct: 392 CKRLRAN-LPVSVDNG--TSDG-GRLS-DFGESVRLSKVLQGQE 430


>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 791

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/405 (51%), Positives = 278/405 (68%), Gaps = 15/405 (3%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++ ++G  V YFPQGH+EQV AS +     ++P YDL  +I CRV+N
Sbjct: 52  YLELWHACAGPLTSLLKKGNVVVYFPQGHLEQV-ASFSPFTPLEIPTYDLQPQIFCRVVN 110

Query: 106 VQLKAEPDTDEVFAQVTLLPE----------SNQDENAVEKEPPPPPPPRFHVHSFCKTL 155
           VQL A  + DEV+ QVTLLP+             +E   E++     P +   H FCKTL
Sbjct: 111 VQLLANKENDEVYTQVTLLPQPELEGMYSEGKELEELGAEEDGDERSPTKSTPHMFCKTL 170

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EW+FRHI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 230

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           L +GWS+FVS K LV+GDA +FLRGENGELR+G+RRA+R + ++P SVI S + +  VL+
Sbjct: 231 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSNVLS 290

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
           +  +A+ST + F V+Y PR S ++F+VPY +Y++SIKN  SIG RFKMRFE +E+ E+R 
Sbjct: 291 SVANAISTKSKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRC 350

Query: 336 -TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            +GT++   D DP RW  SKWRCL VRWDE       +RVS W+I+P+   P L+    P
Sbjct: 351 SSGTLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDPSAPLPPLSIQSSP 410

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           R K+ R+ +  +SP S ++T  GS  +  + S  +   +VLQGQE
Sbjct: 411 RLKKLRTGLQVASP-SHLITARGSGLVGFEESVRS--PKVLQGQE 452


>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
          Length = 701

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/368 (55%), Positives = 273/368 (74%), Gaps = 7/368 (1%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPS 97
           G  +  L++ELW ACAGPLV +P+ G+RV+YF QGH+EQV+  ++Q V   Q+ ++ +P 
Sbjct: 5   GGRDAELFSELWRACAGPLVELPQPGQRVFYFLQGHLEQVQQPSDQKVLADQIKMFQVPY 64

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           KILCRV+NV+LKAE +T+EV+AQ+TLLPE +Q+      +PP P   R  VHSF K LT 
Sbjct: 65  KILCRVVNVELKAEVETEEVYAQITLLPEQDQEYLPSSPDPPLPEVRRPVVHSFSKILTP 124

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHA+ECLPPLDMS   PTQEL  KD+ G+EWRF+HI+RGQPRRHLL 
Sbjct: 125 SDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHLLT 184

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS FV+SK+LV GDAF++LR E GE RVGVR  ++++  +PSSV+SS SMHLGVLA+A
Sbjct: 185 TGWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHLGVLASA 244

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
            HA+ T ++F VYY+PR S S++IV  ++Y  + K  Y++G+RFKM FEGEE P ++F+G
Sbjct: 245 SHALQTKSIFLVYYRPRVSQSQYIVNVNKYFLTSKLRYTVGVRFKMSFEGEEVPVKKFSG 304

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP--- 394
           TIVG     PQ W  S+W+  KV+WD+ +    PERVS W+IEPA    + +++ +P   
Sbjct: 305 TIVGDGALSPQ-WSCSEWKSKKVQWDDPANCNGPERVSPWEIEPADGAASASTINVPLQS 363

Query: 395 --RPKRPR 400
             R KRPR
Sbjct: 364 SIRNKRPR 371


>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 791

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/405 (51%), Positives = 278/405 (68%), Gaps = 15/405 (3%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQV AS +     ++P YDL  +I CRV+N
Sbjct: 51  YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASFSPFTPLEIPTYDLQPQIFCRVVN 109

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----------PPPRFHVHSFCKTL 155
           VQL A  + DEV+ QVTLLP++  +   +E +               P +   H FCKTL
Sbjct: 110 VQLLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKSTPHMFCKTL 169

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLH  EW+FRHI+RGQPRRHL
Sbjct: 170 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPRRHL 229

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           L +GWS+FVS K LV+GDA +FLRGENGELR+G+RRA+R + ++P SVI S + +  VL+
Sbjct: 230 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYPNVLS 289

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR- 334
           +  +A+ST + F V+Y PR S ++F+VPY +Y++SIKN  SIG RFKMRFE +E+ E+R 
Sbjct: 290 SVANAISTKSKFHVFYSPRASQADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRC 349

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            +G ++G  D DP RW  SKWRCL VRWDE       +RVS W+I+P+   P L+    P
Sbjct: 350 CSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDPSAPLPPLSIQSSP 409

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           R K+ R+ +  +SP S ++T  G   ++ + S  +   +VLQGQE
Sbjct: 410 RLKKLRTGLQVASP-SHLITARGRGLIDFEESVRS--PKVLQGQE 451


>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
           Aux/IAA_ARF_dimerisation [Medicago truncatula]
          Length = 810

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/405 (50%), Positives = 273/405 (67%), Gaps = 15/405 (3%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQV AS +  +  ++P Y L  +ILCRV+N
Sbjct: 54  YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASLSLFSSLEIPTYGLQPQILCRVVN 112

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----------PPPRFHVHSFCKTL 155
           VQL A  + DEV+ QV LLP++      ++ + P             P +   H FCKTL
Sbjct: 113 VQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG  W+FRHI+RGQPRRHL
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHL 232

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           L +GWS+FVS K LV+GDA +FLRGENGELR+G+RRA R +  +P S+I + S     L+
Sbjct: 233 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLS 292

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
           +  +A+S  +MF V+Y PR S ++F+VPY +Y +SI+N  +IG RFKM+FE +E+PE+R 
Sbjct: 293 SVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDESPERRC 352

Query: 336 -TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            +G + G+ D DP +W  SKWRCL VRWDE       +RVS W+I+P+ + P LN     
Sbjct: 353 SSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNIQSSR 412

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           R K+ R+ +   SP S  +T   S  ++ D S  +  S+VLQGQE
Sbjct: 413 RLKKLRTGLHVESP-SHFITAGDSGFMDFDESIRS--SKVLQGQE 454


>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
 gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
 gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
 gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
 gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 788

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/415 (49%), Positives = 279/415 (67%), Gaps = 35/415 (8%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y+ELWHACAGPL  +P++G  V YFPQGH+EQ +A  +  +  ++P +DL  +I+CRV+
Sbjct: 62  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIVCRVV 120

Query: 105 NVQLKAEPDTDEVFAQVTLLP--------------------ESNQDENAVEKEPPPPPPP 144
           NVQL A  DTDEV+ QVTLLP                    E     ++V++ P      
Sbjct: 121 NVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTP------ 174

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
               H FCKTLTASDTSTHGGFSV RR A++C  PLD  +Q P+QEL AKDLHG EW+FR
Sbjct: 175 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFR 230

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E GELR+G+RRA R +  +P S+I
Sbjct: 231 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSII 290

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
             +S    +L+   +AVST +MF V+Y PR + +EF++PY++Y+ SI++   IG RF+MR
Sbjct: 291 EKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMR 349

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FE +++PE+R  G + G+ D DP RW +SKWRCL VRWDE+      ERVS W+I+P+++
Sbjct: 350 FEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVS 409

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
            P L+    PRPKRP + +L ++P  + +T+ G     +D   +   S+VLQGQE
Sbjct: 410 LPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF---LDFEESVRPSKVLQGQE 461


>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
 gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/405 (50%), Positives = 280/405 (69%), Gaps = 15/405 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y ELWH CAG L ++P++G  V YFPQGH+EQ  AS++      +  +DLP +I CRV+
Sbjct: 52  IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQA-ASSSPFPPMDISTFDLPPQIFCRVV 110

Query: 105 NVQLKAEPDTDEVFAQVTLLP---------ESNQDEN-AVEKEPPPPPPPRFHVHSFCKT 154
           NVQL A  + DEV+ QVTLLP         E  + E   V++E     P +   H FCKT
Sbjct: 111 NVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKT 170

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EWRFRHI+RGQPRRH
Sbjct: 171 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 230

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FVS K LV+GDA +FLRGE GELR+G+RRA+R +  +P S+I + + +  VL
Sbjct: 231 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVL 290

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           + A +AV+T +MF V+Y PR S +EF++PY +Y++SI N  SIG RFKMR++ +++PE+R
Sbjct: 291 SLAANAVATKSMFHVFYSPRASHAEFVIPYQKYVKSITNPISIGTRFKMRYDMDDSPERR 350

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            +G + GI D DP RW +SKWRCL VRWD+       ERVS W+I+P+++ P L+    P
Sbjct: 351 SSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLPPLSIQSSP 410

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           R K+ R+++  + P++ +    G   L+ + S  +  S+VLQGQE
Sbjct: 411 RLKKLRTSLQATPPNNPI--NGGGGFLDFEESVRS--SKVLQGQE 451


>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 398

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/400 (52%), Positives = 279/400 (69%), Gaps = 19/400 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L  ELWHACAGPL  +P     V Y+PQGHIEQV A+    A +Q    +LP+ +LC++ 
Sbjct: 4   LDCELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAADVYQASKQFS--NLPAHLLCKIS 61

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            ++L+A+P TDEVFAQ+ L P+  + E   E +  PPP  + +V SFCKTLTASDTSTHG
Sbjct: 62  KIELQADPHTDEVFAQMDLTPQY-ETEFTKEMKDAPPPTMQKNVRSFCKTLTASDTSTHG 120

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSV RR A++CLP LD S  PP QEL AKDLHG EW FRHI+RG PRRHLL +GWSVFV
Sbjct: 121 GFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTGWSVFV 180

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           S KRLVAGD  IFLRGENG+LRVGVRRA +Q     S+  S+ ++HLGVLA A HA +  
Sbjct: 181 SQKRLVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAAASHAATER 240

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
             F+V Y PRTSPSEF++PY +Y+++ +NN ++G RFKM+FE +E+ E+R++GTIV + D
Sbjct: 241 LRFSVIYNPRTSPSEFVIPYHKYLKTKENNLTVGSRFKMKFESDESTERRYSGTIVEVSD 300

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM----PRPK-RP 399
           ADP +W +S WR +KV WDE+++  R ERVS W+IEP +    +++LP     PRPK RP
Sbjct: 301 ADPLKWPNSAWRSMKVEWDESAS-ERHERVSPWEIEPFV---PISTLPTPSVGPRPKRRP 356

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
            + +  SSP       +G+S+  +DP  +   +R+L   +
Sbjct: 357 PTFVTDSSP-------QGTSQSVLDPQQSNKLARILHSHD 389


>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
 gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
          Length = 730

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 208/412 (50%), Positives = 273/412 (66%), Gaps = 24/412 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++  ELWHACAGPL+++P++G  V YFPQGH+EQ+        D  + VYDLPS I CRV
Sbjct: 49  SVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQL-------PDLPLAVYDLPSYIFCRV 101

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAV---------EKEPPPPPPPRFHVHSFCKT 154
           ++V+L AE   DEV+AQV+L+P+S Q E  +         E+E           H FCKT
Sbjct: 102 VDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKSTTTHMFCKT 161

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RGQPRRH
Sbjct: 162 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHIYRGQPRRH 221

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+ K+LV+GDA +FLRG++GELR+G+RRA + +       + S  ++   L
Sbjct: 222 LLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCSQQLNQSTL 281

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
               HA+S  ++F + Y PR S SEFI+P  ++++S+  ++S+GMRFKMRFE E+A E+R
Sbjct: 282 TDVVHAMSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYSFSVGMRFKMRFETEDAAERR 341

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           + G I GI D DP RW  SKWRCL VRWD+  T  R  RVS W+IEP+ +  + NS   P
Sbjct: 342 YMGLITGISDLDPARWPGSKWRCLVVRWDDMET-NRHSRVSPWEIEPSGSVSSCNSFMTP 400

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE---FSTL 443
             KR RS    S P+  V    G+S    +PS    F +VLQGQE   F+TL
Sbjct: 401 GLKRSRSGFPSSKPEFPVPDGIGASDFG-EPSR---FQKVLQGQEILNFNTL 448


>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
          Length = 638

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/415 (51%), Positives = 271/415 (65%), Gaps = 44/415 (10%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ-QMPVYDLPSKILCRVINVQ 107
           LWHACAGPL ++P++G  V YFPQGHIEQ   +++    Q Q+P   LP ++ CRV+NV 
Sbjct: 23  LWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSXHLPPQVFCRVLNVN 82

Query: 108 LKAEPDTDEVFAQVTL----------------LPESNQDENAVEKEPPPPPPPRFHVHSF 151
           L AEP+TDEV+AQVTL                L E  +  N + K  P         H F
Sbjct: 83  LHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTP---------HMF 133

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RGQP
Sbjct: 134 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQP 193

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM-- 269
           RRHLL +GWS+FV+ + LV+GDA +FLRG++GELR+G+RRA       P S+I +HS+  
Sbjct: 194 RRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASH-----PRSIIPTHSVLS 248

Query: 270 -----HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
                 L VL+ A +A+S+ +MF ++Y PR SPSEF++PY +Y+  I     +GMRFKMR
Sbjct: 249 GQWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPVCVGMRFKMR 308

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FE E+A E+R +G I GI D DP RW DSKWRCL VRWDE        RVS W+IEP++ 
Sbjct: 309 FEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVL 368

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           PPALN   +PR K+ R + LPS     V    G   L V  S  +   +VLQGQE
Sbjct: 369 PPALN---VPRLKKLRPS-LPSGAADVVAVSTGGGLLEVRESVRS--RKVLQGQE 417


>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
          Length = 748

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/415 (51%), Positives = 271/415 (65%), Gaps = 44/415 (10%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ-QMPVYDLPSKILCRVINVQ 107
           LWHACAGPL ++P++G  V YFPQGHIEQ   +++    Q Q+P   LP ++ CRV+NV 
Sbjct: 23  LWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSXHLPPQVFCRVLNVN 82

Query: 108 LKAEPDTDEVFAQVTL----------------LPESNQDENAVEKEPPPPPPPRFHVHSF 151
           L AEP+TDEV+AQVTL                L E  +  N + K  P         H F
Sbjct: 83  LHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTP---------HMF 133

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RGQP
Sbjct: 134 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQP 193

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM-- 269
           RRHLL +GWS+FV+ + LV+GDA +FLRG++GELR+G+RRA       P S+I +HS+  
Sbjct: 194 RRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASH-----PRSIIPTHSVLS 248

Query: 270 -----HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
                 L VL+ A +A+S+ +MF ++Y PR SPSEF++PY +Y+  I     +GMRFKMR
Sbjct: 249 GQWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPVCVGMRFKMR 308

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FE E+A E+R +G I GI D DP RW DSKWRCL VRWDE        RVS W+IEP++ 
Sbjct: 309 FEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVL 368

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           PPALN   +PR K+ R + LPS     V    G   L V  S  +   +VLQGQE
Sbjct: 369 PPALN---VPRLKKLRPS-LPSGAADVVAVSTGGGLLEVRESVRS--RKVLQGQE 417


>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 791

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/415 (49%), Positives = 278/415 (66%), Gaps = 35/415 (8%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y+ELWHACAGPL  +P++G  V YFPQGH+EQ +A  +  +  ++P +DL  +I CRV+
Sbjct: 57  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIFCRVV 115

Query: 105 NVQLKAEPDTDEVFAQVTLLP---------------ESNQDE-----NAVEKEPPPPPPP 144
           +VQL A  +TDEV+ QVTLLP               E   DE     ++V++ P      
Sbjct: 116 HVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTP------ 169

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
               H FCKTLTASDTSTHGGFSV RR A++C  PLD  +Q P+QEL AKDLHG EW+FR
Sbjct: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFR 225

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HI+RGQPRRHLL +GWS+FVS K L +GDA +FLR E GELR+G+RRA R +  +P S+I
Sbjct: 226 HIYRGQPRRHLLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSII 285

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
             +S    +L+   +AVST +MF V+Y PR + +EF++PY++Y+ SI+N   IG RF+MR
Sbjct: 286 EKNSCS-NILSLLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRNPICIGTRFRMR 344

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FE +++PE+R  G + G+ D DP RW +SKWRCL VRWDE+      ERVS W+I+P+++
Sbjct: 345 FEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSIS 404

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
            P L+    PRPKRP + +L ++P  + +T  G     +D   +   S+VLQGQE
Sbjct: 405 LPHLSIQSSPRPKRPWAGLLDTTPPGNPITERGGF---LDFEESVRPSKVLQGQE 456


>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 620

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/368 (57%), Positives = 261/368 (70%), Gaps = 10/368 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L  ELWHACAGPL  +P     V Y+PQGHIEQV A+    A +Q    +LP+ +LCR+ 
Sbjct: 4   LNCELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAADVYQASKQFS--NLPAHLLCRIS 61

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            ++L+A+P TDEVFAQ+ L P   Q E + E +  P P  + +V SFCKTLTASDTSTHG
Sbjct: 62  KIELQADPQTDEVFAQMDLTP---QYELSKETKDAPSPIQQSNVRSFCKTLTASDTSTHG 118

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSV RR A+ECLP LD +  PP QEL AKDLHG +W FRHI+RG PRRHLL +GWSVFV
Sbjct: 119 GFSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGWSVFV 178

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           S KRLVAGD  IFLRGENG+LRVGVRRA +QQ    S+  SS ++HLGVLA A HA +  
Sbjct: 179 SQKRLVAGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAASHAATER 238

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
             F+V Y PRTSPSEF++PY +Y+ S  NN ++G RFKM+FE EE+ E+R++GTIV I D
Sbjct: 239 LRFSVIYNPRTSPSEFVIPYHKYLRSEDNNLTVGSRFKMKFETEESTERRYSGTIVEISD 298

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNML 404
            DP +W  S WR +KV WDE+++  R ERVS W+IEP L P  +++LP P P  PR    
Sbjct: 299 VDPLKWPSSAWRSMKVEWDESAS-ERHERVSPWEIEP-LVP--ISTLPTP-PVGPRPKRR 353

Query: 405 PSSPDSSV 412
           P + DSSV
Sbjct: 354 PPTFDSSV 361


>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
 gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
          Length = 733

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/412 (49%), Positives = 274/412 (66%), Gaps = 20/412 (4%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQ+ AS +  +  +M  +DL   ILCRVIN
Sbjct: 52  YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110

Query: 106 VQLKAEPDTDEVFAQVTL--LPE-----------SNQDENAVEKEPPPPPPPRFHVHSFC 152
           V L A  + DEV+ Q+TL  LPE                N  + +     P R   H FC
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFC 170

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++C PPLD ++  P+QEL AKDLHG EWRFRHI+RGQPR
Sbjct: 171 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPR 230

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWS+FVS K L++GDA +FLRGENGELR+G+RRA+R +  +P S++ + +    
Sbjct: 231 RHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCAN 290

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
            LA    A+ST + F V+Y PR   ++FI+   +Y++SI N  S+G RFKMRFE +++PE
Sbjct: 291 DLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPE 350

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +RF G +VGI D D  RW +SKWRCL VRWD+ S     ERVS W+I+P+++ P L+   
Sbjct: 351 RRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPSVSLPPLSVQS 408

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
            PR K+ R+++  + P+++   R G     +D   +   S+VLQGQE  +LR
Sbjct: 409 SPRLKKLRTSLQAAPPNNAFTGRGGF----MDFEDSVRSSKVLQGQEICSLR 456


>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
          Length = 838

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/359 (56%), Positives = 262/359 (72%), Gaps = 3/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  LP++++C+
Sbjct: 21  CLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTNKEIDAHIPSYPGLPAQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDTS 161
           + NV + A+ +TDEV+AQ+TL P S Q++  V   P     P +   + FCKTLTASDTS
Sbjct: 81  LHNVTMHADNETDEVYAQMTLQPLSAQEQKDVCLLPAELGMPSKQPTNYFCKTLTASDTS 140

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  PPLD S+QPP QEL AKDLHGNEW+FRH+FRGQP+RHLL +GWS
Sbjct: 141 THGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRHVFRGQPKRHLLTTGWS 200

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRLVAGDA IF+  EN +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 201 VFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 260

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPS+F++P  +Y +++ +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 261 ATNSRFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 320

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P  +SL   R KRP
Sbjct: 321 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSLFPLRLKRP 379


>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
 gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
          Length = 822

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/417 (48%), Positives = 273/417 (65%), Gaps = 27/417 (6%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQV AS +  +  ++P Y L  +ILCRV+N
Sbjct: 54  YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASLSLFSSLEIPTYGLQPQILCRVVN 112

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----------PPPRFHVHSFCKTL 155
           VQL A  + DEV+ QV LLP++      ++ + P             P +   H FCKTL
Sbjct: 113 VQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG------ 209
           TASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG  W+FRHI+RG      
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETEL 232

Query: 210 ------QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
                 QPRRHLL +GWS+FVS K LV+GDA +FLRGENGELR+G+RRA R +  +P S+
Sbjct: 233 LCWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESI 292

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKM 323
           I + S     L++  +A+S  +MF V+Y PR S ++F+VPY +Y +SI+N  +IG RFKM
Sbjct: 293 IGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKM 352

Query: 324 RFEGEEAPEQRF-TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           +FE +E+PE+R  +G + G+ D DP +W  SKWRCL VRWDE       +RVS W+I+P+
Sbjct: 353 KFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPS 412

Query: 383 LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
            + P LN     R K+ R+ +   SP S  +T   S  ++ D S  +  S+VLQGQE
Sbjct: 413 TSLPPLNIQSSRRLKKLRTGLHVESP-SHFITAGDSGFMDFDESIRS--SKVLQGQE 466


>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
 gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
          Length = 331

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 187/291 (64%), Positives = 235/291 (80%), Gaps = 1/291 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LYTELW+ACAGPLV VPR G++V+YFPQGH+EQV A  N+ +   MP+YDLP KILC+V+
Sbjct: 1   LYTELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIYDLPYKILCKVV 60

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPR-FHVHSFCKTLTASDTSTH 163
           +VQLKAE  TDEVFA +TLLP +  DE +  K+       R   V SF K LT SDTST 
Sbjct: 61  HVQLKAEAKTDEVFAHITLLPVAEGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDTSTQ 120

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV +RHA+E LPPLD S+QPP QEL AKDLHG+EWRFRHI+RGQP+RHLL  GWS F
Sbjct: 121 GGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGWSTF 180

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           +SSKR+VAGD+FIFLRGE+GELRVGVRRAM+ + N+ ++V+++HSM LG+L++A HA+ST
Sbjct: 181 ISSKRVVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGILSSASHAIST 240

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           G++FT+++ P TSP+EFI+P+DQYM+S +  YSIG RF M+FEGEE  EQR
Sbjct: 241 GSIFTIFFHPWTSPAEFIIPFDQYMKSAEIEYSIGTRFIMQFEGEECTEQR 291


>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
          Length = 758

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/416 (49%), Positives = 272/416 (65%), Gaps = 36/416 (8%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y+ELWHACAGPL ++P++G  V YFPQGH+EQ  A  +  +   +P  DL  +I CRV 
Sbjct: 50  IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-GAMVSYSSPLDIPKLDLSPQIFCRVA 108

Query: 105 NVQLKAEPDTDEVFAQVTLLP--------------------ESNQDENAVEKEPPPPPPP 144
           NV L A  +TDEV+ QVTLLP                    E     ++V+K P      
Sbjct: 109 NVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTP------ 162

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
               H FCKTLTASDTSTHGGFSV RR A++C  PLD  +Q P+QEL AKDLHG EW+FR
Sbjct: 163 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFR 218

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR ENGELR+G+RR+ R +  +P S+I
Sbjct: 219 HIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSII 278

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
             +S    +L+   +AVS  +MF V+Y PR + SEF++PY++Y+ SIKN   IG RF+MR
Sbjct: 279 QKYSSS-SILSLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSIKNPICIGTRFRMR 337

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FE +++PE+R  G + G+ D DP RW +SKWRCL VRWDE+      ERVS W+I+P+ +
Sbjct: 338 FEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDPSGS 397

Query: 385 PPALNSLPMPRPKRPRSNML-PSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
            P L+    PRPKRP + +L  ++P  + +T  G     +D   +   S+VLQGQE
Sbjct: 398 LPPLSIQSSPRPKRPWAGLLGTTTPQGNPITERGGF---LDFEESVRPSKVLQGQE 450


>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
          Length = 733

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/412 (49%), Positives = 274/412 (66%), Gaps = 20/412 (4%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQ+ AS +  +  +M  +DL   ILCRVIN
Sbjct: 52  YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110

Query: 106 VQLKAEPDTDEVFAQVTL--LPE-----------SNQDENAVEKEPPPPPPPRFHVHSFC 152
           V L A  + DEV+ Q+TL  LPE                N  + +     P +   H FC
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTKSTPHMFC 170

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++C PPLD ++  P+QEL AKDLHG EWRFRHI+RGQPR
Sbjct: 171 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPR 230

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWS+FVS K L++GDA +FLRGENGELR+G+RRA+R +  +P S++ + +    
Sbjct: 231 RHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCAN 290

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
            LA    A+ST + F V+Y PR   ++FI+   +Y++SI N  S+G RFKMRFE +++PE
Sbjct: 291 DLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPE 350

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           ++F G +VGI D D  RW +SKWRCL VRWD+ S     ERVS W+I+P+++ P L+   
Sbjct: 351 RKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPSVSLPPLSVQS 408

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
            PR K+ R+++  + P+++   R G     +D   +   S+VLQGQE  +LR
Sbjct: 409 SPRLKKLRTSLQAAPPNNAFTGRGGF----MDFEDSVRSSKVLQGQEICSLR 456


>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
 gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
          Length = 713

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/405 (49%), Positives = 269/405 (66%), Gaps = 15/405 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y ELWHACAGPL ++P++G  V YFPQGH+EQ+ AS++  + + MP +DL  +I C+V+
Sbjct: 38  IYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQL-ASSSPFSHRDMPNFDLHPQIFCKVV 96

Query: 105 NVQLKAEPDTDEVFAQVTLLPE---SNQD-------ENAVEKEPPPPPPPRFHVHSFCKT 154
           NVQL A  + DEV+ ++TLLP+     QD       E  V+ E     P +   H FCKT
Sbjct: 97  NVQLLANRENDEVYTRLTLLPQPEVVGQDLEGKELQELGVDGEGDDASPTKSTPHMFCKT 156

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C P LD  +Q P+QEL AKDLHG EWRFRHI+RGQPRRH
Sbjct: 157 LTASDTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQPRRH 216

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FVS K LV+GDA +FLRGE GELR+G+RRA R +  +P SV    +     L
Sbjct: 217 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSLPSAL 276

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           +   +A+ST ++FTV Y PR + + F+VPY +Y++SI N   IG RFKMRFE +++PE+R
Sbjct: 277 SLVSNAISTKSVFTVSYSPRATHAVFVVPYQKYIKSITNAVCIGTRFKMRFEMDDSPERR 336

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            +G + G  D DP +W +SKWRCL VRWDE       ERVS W+I+ +++ P L     P
Sbjct: 337 CSGVVTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASVSLPPLIIQSSP 396

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           R K+ R+ +  + PD  +    G     +D   +   S+VLQGQE
Sbjct: 397 RLKKLRTGLQAAPPDKPIAGGGGF----LDFKESVRSSKVLQGQE 437


>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
          Length = 285

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/257 (73%), Positives = 219/257 (85%), Gaps = 2/257 (0%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLPS 97
           G P  ALY ELWHACAGPLVTVPR+GERVYYFPQGH+EQ+EAS + Q  DQ +P++DLP 
Sbjct: 13  GMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMFDLPP 72

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           KILCRV+NV+L+AE D+DEV+AQ+ L PE++Q+E     +  P    +   HSFCKTLTA
Sbjct: 73  KILCRVVNVELRAEADSDEVYAQIMLQPEADQNE-LTSLDAEPQEREKCTAHSFCKTLTA 131

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSVLRRHA+ECLP LDMS+ PP QEL AKDLHG EW FRHIFRGQP+RHLL 
Sbjct: 132 SDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLT 191

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWSVFVSSKRLV+GDAFIF+RGENGELRVGVRR MRQ  ++PSSVISSHSMHLGVLATA
Sbjct: 192 TGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATA 251

Query: 278 WHAVSTGTMFTVYYKPR 294
            HA+STGT+F+V+YKPR
Sbjct: 252 SHAISTGTLFSVFYKPR 268


>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
 gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
          Length = 824

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/380 (52%), Positives = 266/380 (70%), Gaps = 21/380 (5%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T GVKR  +PE      LWHACAGPLV++P  G RV YFPQGH EQV AST + AD  +P
Sbjct: 17  TPGVKRGPNPE------LWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIP 70

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA-----VEKEPPPPPPPR 145
            Y +LP  ++C++ N+ L A+ +TDEV+AQ+TL P + Q++++     + ++   P    
Sbjct: 71  SYPNLPPHLVCQLHNITLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPS--- 127

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
                FCKTLTASDTSTHGGFS+ RR A++  PPLD S+QPP QE+ A+DLH  EWRFRH
Sbjct: 128 ---EYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRH 184

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
           I+RGQPRRHLL +GWSVFVS+KRL  GDA +F+R E G+L +G+RRA RQQ ++P S++S
Sbjct: 185 IYRGQPRRHLLTTGWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLS 244

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSI--GMRFKM 323
           + SM++G+LA A HA ST + FT++Y PR SPSEF++P  +Y  ++ NN  +  GMRF+M
Sbjct: 245 TDSMYIGILAAAAHANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRM 304

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
           +FE EE+  +R TGTIVG  D DP RW +S WR LKV WDE +   + +R+SLW+IEPA 
Sbjct: 305 QFETEESGIRRHTGTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEPAS 364

Query: 384 APPALNSLPMP-RPKRPRSN 402
            P  + S     R KRP S 
Sbjct: 365 TPYLVCSPSFTFRSKRPWSQ 384


>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
          Length = 802

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/407 (49%), Positives = 271/407 (66%), Gaps = 20/407 (4%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQ+ AS +  +  +M  +DL   ILCRVIN
Sbjct: 52  YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110

Query: 106 VQLKAEPDTDEVFAQVTL--LPE-----------SNQDENAVEKEPPPPPPPRFHVHSFC 152
           V L A  + DEV+ Q+TL  LPE                N  + +     P R   H FC
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFC 170

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++C PPLD ++  P+QEL AKDLHG EWRFRHI+RGQPR
Sbjct: 171 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPR 230

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWS+FVS K L++GDA +FLRGENGELR+G+RRA+R +  +P S++ + +    
Sbjct: 231 RHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCAN 290

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
            LA    A+ST + F V+Y PR   ++FI+   +Y++SI N  S+G RFKMRFE +++PE
Sbjct: 291 DLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPE 350

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +RF G +VGI D D  RW +SKWRCL VRWD+ S     ERVS W+I+P+++ P L+   
Sbjct: 351 RRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPSVSLPPLSVQS 408

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
            PR K+ R+++  + P+++   R G     +D   +   S+VLQGQE
Sbjct: 409 SPRLKKLRTSLQAAPPNNAFTGRGGF----MDFEDSVRSSKVLQGQE 451


>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
 gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
          Length = 824

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/383 (52%), Positives = 265/383 (69%), Gaps = 27/383 (7%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T GVKR  +PE      LWHACAGPLV++P  G RV YFPQGH EQV AST + AD  +P
Sbjct: 17  TPGVKRGPNPE------LWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIP 70

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAV--------EKEPPPPP 142
            Y +LP  ++C++ N+ L A+ +TDEV+AQ+TL P + Q++++          ++P    
Sbjct: 71  SYPNLPPHLVCQLHNITLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPS--- 127

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCKTLTASDTSTHGGFS+ RR A++  PPLD S+QPP QE+ A+DLH  EWR
Sbjct: 128 ------EYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWR 181

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQPRRHLL +GWSVFVS+KRL  GDA +F+R E G+L +G+RRA RQQ ++P S
Sbjct: 182 FRHIYRGQPRRHLLTTGWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLS 241

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSI--GMR 320
           ++S+ SM++G+LA A HA ST + FT++Y PR SPSEF++P  +Y  ++ NN  +  GMR
Sbjct: 242 LLSTDSMYIGILAAAAHANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMR 301

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           F+M+FE EE+  +R TGTIVG  D DP RW +S WR LKV WDE +   + +R+SLW+IE
Sbjct: 302 FRMQFETEESGIRRHTGTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIE 361

Query: 381 PALAPPALNSLPMP-RPKRPRSN 402
           PA  P  + S     R KRP S 
Sbjct: 362 PASTPYLVCSPSFTFRSKRPWSQ 384


>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
          Length = 891

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/366 (56%), Positives = 263/366 (71%), Gaps = 3/366 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  LP +++C+
Sbjct: 21  CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDTS 161
           + N+ + A+ +TDEV+AQ+TL P S Q++  V   P     P +   + FCKTLTAS TS
Sbjct: 81  LHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGIPSKQPTNYFCKTLTASGTS 140

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  PPLD S+QPP QEL AKDLHGNEW+FRHIFRGQP+RHLL +GWS
Sbjct: 141 THGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWS 200

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRLVAGDA IF+  EN +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 201 VFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 260

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 261 ATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 320

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S    R KRP 
Sbjct: 321 GISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFSLRLKRPW 380

Query: 401 SNMLPS 406
            + LPS
Sbjct: 381 PSGLPS 386


>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
          Length = 915

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/385 (54%), Positives = 270/385 (70%), Gaps = 27/385 (7%)

Query: 39  GDPEMA-----LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G PE+A     L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y
Sbjct: 16  GSPEVAEEHKCLNSELWHACAGPLVSLPAVGSRVLYFPQGHSEQVSASTNKEIESQIPNY 75

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDEN---------AVEKEPPPPPP 143
            +LP +++C++ NV + A+ +TDEV AQ+TL P S Q+              K+P     
Sbjct: 76  PNLPPQLICQLHNVIMHADAETDEVCAQMTLQPLSPQELKDPFLPAELGTANKQP----- 130

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
                + FCKTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGNEW+F
Sbjct: 131 ----TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKF 186

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
           RHIFRGQP+RHLL +GWSVF+S+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV
Sbjct: 187 RHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSV 246

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFK 322
           +SS SMH+G+LA A HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+
Sbjct: 247 LSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFR 306

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           M FE EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP 
Sbjct: 307 MLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 366

Query: 383 LAPPALNS-LPMPRPKRPRSNMLPS 406
              P  +S  PM R KRP    LPS
Sbjct: 367 TTIPMYSSPFPM-RLKRPWPTGLPS 390


>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
          Length = 837

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/425 (48%), Positives = 269/425 (63%), Gaps = 18/425 (4%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELW ACAGP++++PR+G  V YFPQGH+EQ           +   +D+P  + CRV+NV 
Sbjct: 33  ELWRACAGPVISLPRKGTIVVYFPQGHLEQAPKF-------RAFAHDIPPHLFCRVLNVN 85

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV-------HSFCKTLTASDT 160
           L AE  TDEV+AQV+L+PE      +++++                  H FCKTLTASDT
Sbjct: 86  LHAEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEIEELSTATPHMFCKTLTASDT 145

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           STHGGFSV RR A++C P LD  +Q P+QEL AKDLHG EW+FRHI+RGQPRRHLL +GW
Sbjct: 146 STHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGW 205

Query: 221 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 280
           S FV+ K+LV+GDA +FLRGENGELR+G+RRA R +G VP S++ S +++L  LA    A
Sbjct: 206 SSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALAAVSTA 265

Query: 281 VSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIV 340
           VST +MF VYY PR SP+EFI+PY ++ +SI    SIG RFKMR+E E+A EQR TG I 
Sbjct: 266 VSTKSMFHVYYNPRASPAEFIIPYRKFSKSINQPLSIGTRFKMRYETEDATEQRPTGLIT 325

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           GI D DP RW  SKWRCL VRWDE +     ++VS W+IEP+ +    +S   P  K+PR
Sbjct: 326 GIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEPSGSLSGFSSPLTPGSKKPR 385

Query: 401 SNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEK 460
            ++     D       G S    D   + GF +VLQGQE    +  +   +      +E 
Sbjct: 386 ISLPSIKADFPFRDGTGIS----DFGESLGFQKVLQGQEILGFKAPYGSIDGLNHHLSEI 441

Query: 461 SVVWP 465
              +P
Sbjct: 442 RRCYP 446


>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
 gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
 gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
 gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
           Japonica Group]
 gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
           Japonica Group]
 gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
 gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
 gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
 gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 908

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/376 (54%), Positives = 270/376 (71%), Gaps = 12/376 (3%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLP 96
           V + +  L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y +LP
Sbjct: 20  VAEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLP 79

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFC 152
            +++C++ NV + A+ +TDEV+AQ+TL P S Q+     K+P  P       +   + FC
Sbjct: 80  PQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEL----KDPFLPAELGTASKQPTNYFC 135

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP+
Sbjct: 136 KTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPK 195

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRLVAGD+ +F+  ++ +L +G+RRA R Q  +PSSV+SS SMH+G
Sbjct: 196 RHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIG 255

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAP 331
           +LA A HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+ 
Sbjct: 256 LLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS 315

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
            +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S 
Sbjct: 316 VRRYMGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS- 374

Query: 392 PMP-RPKRPRSNMLPS 406
           P P R KRP    LPS
Sbjct: 375 PFPLRLKRPWPTGLPS 390


>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 899

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/366 (55%), Positives = 261/366 (71%), Gaps = 4/366 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y  LP +++C+
Sbjct: 19  VLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + N+ + A+ +TDEV+AQ+TL P S Q+            P R   + FCKTLTASDTST
Sbjct: 79  LHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGDA +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG+LA A HA +
Sbjct: 199 FVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT+++ PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRPR 400
           I D DP RW++S WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP 
Sbjct: 319 ISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRLKRPW 377

Query: 401 SNMLPS 406
              LPS
Sbjct: 378 PTGLPS 383


>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/407 (49%), Positives = 268/407 (65%), Gaps = 22/407 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++  ELWHACAGPL+++P++G  V YFPQGH+EQ+       +D     YDLP  + CRV
Sbjct: 45  SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL-------SDYPAVAYDLPPHVFCRV 97

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQ----------DENAVEKEPPPPPPPRFHVHSFCK 153
           ++V+L AE  TDEV+AQV+L+PE+ Q          + +  E+E           H FCK
Sbjct: 98  VDVKLHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCK 157

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EWRFRHI+RGQPRR
Sbjct: 158 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRR 217

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS FV+ K+LV+GDA +FLRG +GELR+G+RRA + +G+ P   + S  ++L  
Sbjct: 218 HLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNT 277

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           L    +A+ST ++F + Y PR S SEFI+P  ++ +SI +++S GMRFKMR E E+A E+
Sbjct: 278 LTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAER 337

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R+TG I GI D DP RW  SKWRCL VRWD+     R  RVS W+IE + +     SL +
Sbjct: 338 RYTGLITGISDMDPVRWPGSKWRCLLVRWDDIEA-NRHNRVSPWEIELSGSLSGSGSLTV 396

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           P  KR R  +  + PD SV    G S    D   ++ F +VLQGQE 
Sbjct: 397 PGSKRTRIGLPGTRPDFSVPNGMGVS----DFGESSRFQKVLQGQEI 439


>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
          Length = 889

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/359 (56%), Positives = 258/359 (71%), Gaps = 3/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G  V YFPQGH EQV ASTN+  D  +P Y  LP +++C+
Sbjct: 21  CLNSELWHACAGPLVSLPPVGSGVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDTS 161
           + N+ + A+ +TDEV+AQ+TL P S Q++  V   P     P +   + FCKTLTASDTS
Sbjct: 81  LHNLTMHADVETDEVYAQMTLQPLSAQEQKDVCLLPAELGIPSKQPTNYFCKTLTASDTS 140

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  PPLD S+QPP QEL AKDLHGNEW+FRHIFRGQP+RHLL +GWS
Sbjct: 141 THGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWS 200

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRLVAGDA IF+  EN +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 201 VFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 260

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPSEF++P  +Y +++ +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 261 ATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 320

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S    R KRP
Sbjct: 321 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFSLRLKRP 379


>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
          Length = 904

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/377 (54%), Positives = 266/377 (70%), Gaps = 22/377 (5%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKIL 100
           +  L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y +LP +++
Sbjct: 24  QKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLI 83

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDEN---------AVEKEPPPPPPPRFHVHSF 151
           C++ NV + A+ +TDEV+AQ+TL P S Q+           +  K+P          + F
Sbjct: 84  CQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP---------TNYF 134

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP
Sbjct: 135 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQP 194

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           +RHLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV+SS SMH+
Sbjct: 195 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHI 254

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEA 330
           G+LA A HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+
Sbjct: 255 GLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEES 314

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
             +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S
Sbjct: 315 SVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 374

Query: 391 LPMP-RPKRPRSNMLPS 406
            P P R KRP    LPS
Sbjct: 375 -PFPLRLKRPWPTGLPS 390


>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
          Length = 925

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/399 (51%), Positives = 275/399 (68%), Gaps = 23/399 (5%)

Query: 20  RIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVE 79
           +I +    + + TS V  V +    L +ELWHACAGPLV++P  G RV YFPQGH EQV 
Sbjct: 17  QIAVLSYQNKTNTSAVTDV-EEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVA 75

Query: 80  ASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDEN------ 132
           ASTN+  + Q+P Y +LP +++C++ NV ++A+ +T+EV+AQ+TL P + Q+        
Sbjct: 76  ASTNKEMESQIPSYPNLPPQLICQLHNVTMQADAETEEVYAQMTLQPLNPQELKDPYLPA 135

Query: 133 ---AVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQ 189
               V K+P          + FCKTLTASDTSTHGGFSV RR A++  PPLD ++QPP Q
Sbjct: 136 ELGLVSKQP---------TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQ 186

Query: 190 ELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV 249
           EL A DLHGNEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+
Sbjct: 187 ELMATDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGI 246

Query: 250 RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYME 309
           RRA R Q  +PSSV+SS SMH+G+LA A HA ST + FT++Y PR SPSEF++P  +Y++
Sbjct: 247 RRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVK 306

Query: 310 SIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTI 368
           ++ +   S+GMRF+M FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++  
Sbjct: 307 AVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAG 366

Query: 369 PRPERVSLWKIEPALAPPALNSLPMP-RPKRPRSNMLPS 406
            R  RVSLW+IEP    P   S P P R KRP    LPS
Sbjct: 367 DRQPRVSLWEIEPLTTFPTYTS-PFPLRLKRPWPTGLPS 404


>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
 gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
 gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
          Length = 917

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/377 (54%), Positives = 266/377 (70%), Gaps = 22/377 (5%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKIL 100
           +  L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y +LP +++
Sbjct: 24  QKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLI 83

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDEN---------AVEKEPPPPPPPRFHVHSF 151
           C++ NV + A+ +TDEV+AQ+TL P S Q+           +  K+P          + F
Sbjct: 84  CQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP---------TNYF 134

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP
Sbjct: 135 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQP 194

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           +RHLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV+SS SMH+
Sbjct: 195 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHI 254

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEA 330
           G+LA A HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+
Sbjct: 255 GLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEES 314

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
             +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S
Sbjct: 315 SVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 374

Query: 391 LPMP-RPKRPRSNMLPS 406
            P P R KRP    LPS
Sbjct: 375 -PFPLRLKRPWPTGLPS 390


>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
 gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
          Length = 917

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/377 (54%), Positives = 266/377 (70%), Gaps = 22/377 (5%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKIL 100
           +  L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y +LP +++
Sbjct: 24  QKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLI 83

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDEN---------AVEKEPPPPPPPRFHVHSF 151
           C++ NV + A+ +TDEV+AQ+TL P S Q+           +  K+P          + F
Sbjct: 84  CQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP---------TNYF 134

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP
Sbjct: 135 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQP 194

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           +RHLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV+SS SMH+
Sbjct: 195 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHI 254

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEA 330
           G+LA A HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+
Sbjct: 255 GLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEES 314

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
             +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S
Sbjct: 315 SVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 374

Query: 391 LPMP-RPKRPRSNMLPS 406
            P P R KRP    LPS
Sbjct: 375 -PFPLRLKRPWPTGLPS 390


>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 896

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/367 (55%), Positives = 264/367 (71%), Gaps = 5/367 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 20  CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQ 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDTS 161
           + NV + A+ +TDEV+AQ+TL P S Q++  V   P     P +   + FCKTLTASDTS
Sbjct: 80  LHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTS 139

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWS
Sbjct: 140 THGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 199

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 200 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAA 259

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPSEF +P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 260 ATNSRFTIFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 319

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRP 399
           GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP
Sbjct: 320 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRLKRP 378

Query: 400 RSNMLPS 406
             + LPS
Sbjct: 379 WPSGLPS 385


>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 866

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/367 (55%), Positives = 264/367 (71%), Gaps = 5/367 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 20  CLNSELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQ 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDTS 161
           + NV + A+ +TDEV+AQ+TL P S Q++  V   P     P +   + FCKTLTASDTS
Sbjct: 80  LHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPGKQPTNYFCKTLTASDTS 139

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWS
Sbjct: 140 THGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 199

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 200 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAA 259

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+   R+ GTI 
Sbjct: 260 ATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVPRYMGTIT 319

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRP 399
           GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P R +RP
Sbjct: 320 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRLRRP 378

Query: 400 RSNMLPS 406
             + LPS
Sbjct: 379 WPSGLPS 385


>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
           partial [Cucumis sativus]
          Length = 884

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/366 (55%), Positives = 260/366 (71%), Gaps = 4/366 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y  LP +++C+
Sbjct: 4   VLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQ 63

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + N+ + A+ +TDEV+AQ+TL P S Q+            P R   + FCKTLTASDTST
Sbjct: 64  LHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTST 123

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSV
Sbjct: 124 HGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 183

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGDA +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG+LA A HA +
Sbjct: 184 FVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 243

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT+++ PR SPSEF++P  +Y++++ +   S+GMRF+M FE  E+  +R+ GTI G
Sbjct: 244 TISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRYMGTITG 303

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRPR 400
           I D DP RW++S WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP 
Sbjct: 304 ISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRLKRPW 362

Query: 401 SNMLPS 406
              LPS
Sbjct: 363 PTGLPS 368


>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
          Length = 1043

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 214/408 (52%), Positives = 270/408 (66%), Gaps = 10/408 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ--QMPVYDLPSKILCR 102
           LYTELW ACAG  V VPR  +RV+YFPQGH+EQV A T    D   ++PVYDLPSKILC+
Sbjct: 411 LYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPDSHLEIPVYDLPSKILCK 470

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP-PPPPPPRFHVHSFCKTLTASDTS 161
           ++NV+LKAE  +DEV+AQVTL+PE  +D    E+E      P R   +SF K LT SDTS
Sbjct: 471 IMNVELKAEAYSDEVYAQVTLVPEVQKDNLCFEEEVNIDQIPSRNAAYSFSKILTPSDTS 530

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV +++ADEC PPLDM+ Q P QE+ AKDL+G EWRFRHI+RGQP+RHLL SGWS
Sbjct: 531 THGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKRHLLTSGWS 590

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNV--PSSVISSHSMHLGVLATAWH 279
           +FV++K+LVAGD+ IF+RGE+GELRVG+RRA     N+   SS+IS HSM LG+L  A +
Sbjct: 591 LFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQSSSLISGHSMQLGILTNASN 650

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AV   TMF VYY+P T+P EFIV    Y++S   +Y IG R +M+ E EE+  +R  GTI
Sbjct: 651 AVGNRTMFLVYYRPWTNPFEFIVHLQTYLKSTLQDYPIGTRVQMQHEVEES-LRRLAGTI 709

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDE-TSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           +G ED D  RW  S WR LKV+WD        PERV  W IEP  +      +P    K+
Sbjct: 710 IGNEDIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCPWWIEPLESAKEKKQVPALPTKK 769

Query: 399 PRSNMLP--SSPDSSVLTREGSSKLNVDPSSATGFSRV-LQGQEFSTL 443
               +L   S P  S   +    + +  PSS T  +   LQGQ++S L
Sbjct: 770 KGHALLNQRSLPGISGFGKNDVHQNSAGPSSQTRRADGDLQGQDYSGL 817


>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
          Length = 836

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/363 (54%), Positives = 258/363 (71%), Gaps = 2/363 (0%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPS 97
           G  +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y +LP 
Sbjct: 15  GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPP 74

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           +++C++ NV + A+ +TDEV+AQ+TL P + Q++           P R   + FCKTLTA
Sbjct: 75  QLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTA 134

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++  PPLD S+QPP QEL AKDLH  EW+FRHIFRGQP+RHLL 
Sbjct: 135 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLT 194

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A
Sbjct: 195 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAA 254

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA +T + FTV+Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ 
Sbjct: 255 AHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 314

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL   R 
Sbjct: 315 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 374

Query: 397 KRP 399
           KRP
Sbjct: 375 KRP 377


>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
 gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
 gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
          Length = 605

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 181/336 (53%), Positives = 244/336 (72%), Gaps = 7/336 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE VEAST +  ++  P+ D PSK+ CRVI
Sbjct: 24  MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVI 83

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            +QLK E ++DE +A++TL+P++ Q     + +    P     V+SF K LTASDTS HG
Sbjct: 84  AIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRP----LVNSFTKVLTASDTSVHG 139

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSV ++HA ECLPPLDMS+  PTQE+ A DLHGN+WRFRHI+RG  +RHLL  GW+ F 
Sbjct: 140 GFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFT 199

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SK+LV GD  +F+RGE GELRVG+RRA  QQGN+PSS++S  SM  G++A+A HA    
Sbjct: 200 TSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQ 259

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
            MF V YKPR+  S+FIV YD++++ + N +++G RF MRFEG++  E+R  GTI+G+ D
Sbjct: 260 CMFIVVYKPRS--SQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSD 317

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
             P  W+ S+WR L+V+WDE ++ PRP +VS W IE
Sbjct: 318 FSPH-WKCSEWRSLEVQWDEFASFPRPNQVSPWDIE 352


>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
 gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
          Length = 884

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/366 (54%), Positives = 261/366 (71%), Gaps = 4/366 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G R  YFPQGH EQV ASTN+  + Q+P Y  LP++++C+
Sbjct: 19  VLNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKEVNAQIPSYPSLPAQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P S Q++ A         P +   + FCKTLTASDTST
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLSPQEQKAAYLPADMGTPSKQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S+ PP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG+LA A HA +
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRMMFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRPR 400
           I D D  RW +S+WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP 
Sbjct: 319 ISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPLTTFPTYPS-PFPLRLKRPW 377

Query: 401 SNMLPS 406
              LPS
Sbjct: 378 PPGLPS 383


>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 895

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/366 (54%), Positives = 262/366 (71%), Gaps = 4/366 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  D  +P Y  LP +++C+
Sbjct: 19  VLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + N+ + A+ +TDEV+AQ+TL P + Q++           P +   + FCKTLTASDTST
Sbjct: 79  LHNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S+QPP QEL A+DLHGNEW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG+LA A HA +
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRPR 400
           I D DP RW++S WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP 
Sbjct: 319 ISDLDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPS-PFPLRLKRPW 377

Query: 401 SNMLPS 406
              LPS
Sbjct: 378 PPGLPS 383


>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/406 (49%), Positives = 266/406 (65%), Gaps = 21/406 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++  ELWHACAGPL+++P++G  V YFPQGH+EQ+       +D     YDLP  + CRV
Sbjct: 42  SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL-------SDYPAVAYDLPPHVFCRV 94

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV---------HSFCKT 154
           ++V+L AE  TDEV+AQV+L+PE+   +   E E          +         H FCKT
Sbjct: 95  VDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKT 154

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EWRFRHI+RGQPRRH
Sbjct: 155 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRH 214

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+ K+LV+GDA +FLRG +GELR+G+RRA + +G+ P   + S  ++L  L
Sbjct: 215 LLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTL 274

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
               +A+ST ++F + Y PR S SEFI+P  ++ +SI +++S GMRFKMR E E+A E+R
Sbjct: 275 TAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERR 334

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           +TG I GI D DP RW  SKWRCL VRWD+     R  RVS W+IE + +     SL +P
Sbjct: 335 YTGLITGISDMDPVRWPGSKWRCLLVRWDDIEA-NRHNRVSPWEIELSGSLSGSGSLTVP 393

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
             KR R  +  + PD SV    G S    D   ++ F +VLQGQE 
Sbjct: 394 GSKRTRIGLPGTRPDFSVPNGMGVS----DFGESSRFQKVLQGQEI 435


>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 891

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/367 (55%), Positives = 263/367 (71%), Gaps = 5/367 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  L  +++C+
Sbjct: 19  CLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDTS 161
           + NV + A+ +TDEV+AQ+TL P S Q++  V   P     P +   + FCKTLTASDTS
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTASDTS 138

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  PPLD ++QPP QEL A+DLHGNEW+FRHIFRGQP+RHLL +GWS
Sbjct: 139 THGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWS 198

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRL+AGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 199 VFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAA 258

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPSEF++P  +Y +++ +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 259 ATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 318

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRP 399
           GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP
Sbjct: 319 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRLKRP 377

Query: 400 RSNMLPS 406
             + LPS
Sbjct: 378 WPSALPS 384


>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
 gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
          Length = 919

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/375 (54%), Positives = 265/375 (70%), Gaps = 22/375 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y +LP +++C+
Sbjct: 27  CLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQ 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDEN---------AVEKEPPPPPPPRFHVHSFCK 153
           + NV + A+ +TDEV+AQ+TL P + Q+           +  K+P          + FCK
Sbjct: 87  LHNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQP---------TNYFCK 137

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP+R
Sbjct: 138 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKR 197

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+
Sbjct: 198 HLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGL 257

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPE 332
           LA A HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  
Sbjct: 258 LAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSV 317

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P
Sbjct: 318 RRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-P 376

Query: 393 MP-RPKRPRSNMLPS 406
            P R KRP    LPS
Sbjct: 377 FPLRLKRPWPTGLPS 391


>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 902

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/384 (54%), Positives = 268/384 (69%), Gaps = 18/384 (4%)

Query: 30  STTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           S  SG +RV      L +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  D  
Sbjct: 13  SKFSGERRV------LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAH 66

Query: 90  MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----PPP 144
           +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + Q+    +KEP  P     P 
Sbjct: 67  IPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQE----QKEPYLPAELGAPS 122

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
           +   + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FR
Sbjct: 123 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 182

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+  E  +L +G+RRA R Q  +PSSV+
Sbjct: 183 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVL 242

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKM 323
           SS SMHLG+LA A HA +T + FT++Y PR SPSEFI+P  +Y++++ +   S+GMRF+M
Sbjct: 243 SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRM 302

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
            FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP  
Sbjct: 303 LFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 362

Query: 384 APPALNSLPMP-RPKRPRSNMLPS 406
             P   S P P R KRP     PS
Sbjct: 363 TFPMYPS-PFPLRLKRPWPTGFPS 385


>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
          Length = 820

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/362 (54%), Positives = 258/362 (71%), Gaps = 10/362 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y  LP +++C+
Sbjct: 19  CLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P + Q++      VE   P   P  +    FCKTLTAS
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLTPQEQKDTYIPVELGIPSKQPTNY----FCKTLTAS 134

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+FRHIFRGQP+RHLL +
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 255 HAASTNSCFTIFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL   R K
Sbjct: 315 TITGIGDLDPIRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374

Query: 398 RP 399
           RP
Sbjct: 375 RP 376


>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
          Length = 854

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/363 (54%), Positives = 257/363 (70%), Gaps = 2/363 (0%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPS 97
           G  +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y +LP 
Sbjct: 15  GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPP 74

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           +++C++ NV + A  +TDEV+AQ+TL P + Q++           P R   + FCKTLTA
Sbjct: 75  QLICQLHNVTMHAVVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTA 134

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++  PPLD S+QPP QEL AKDLH  EW+FRHIFRGQP+RHLL 
Sbjct: 135 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLT 194

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A
Sbjct: 195 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAA 254

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA +T + FTV+Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ 
Sbjct: 255 AHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 314

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL   R 
Sbjct: 315 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 374

Query: 397 KRP 399
           KRP
Sbjct: 375 KRP 377


>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 897

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/376 (54%), Positives = 266/376 (70%), Gaps = 10/376 (2%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G KRV D      +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  D  +P Y
Sbjct: 15  GEKRVLD------SELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNY 68

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFC 152
             LP +++C++ N+ + A+ +TDEV+AQ+TL P + Q++N            +   + FC
Sbjct: 69  PSLPPQLICQLHNMTMHADVETDEVYAQMTLQPLNPQEQNEAYLPAELGTASKQPTNYFC 128

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLHGNEW+FRHIFRGQP+
Sbjct: 129 KTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPK 188

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG
Sbjct: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLG 248

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAP 331
           +LA A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+ 
Sbjct: 249 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS 308

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NS 390
            +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   +S
Sbjct: 309 VRRYMGTITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSS 368

Query: 391 LPMPRPKRPRSNMLPS 406
            P+ R KRP    LPS
Sbjct: 369 FPL-RLKRPWPPGLPS 383


>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 891

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/421 (50%), Positives = 280/421 (66%), Gaps = 22/421 (5%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
            +G KRV      L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P
Sbjct: 15  VTGEKRV------LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIP 68

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRF 146
            Y  L  +++C++ NV + A+ +TDEV+AQ+TL P + Q++    K+P  P     P R 
Sbjct: 69  NYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQ----KDPYLPAELGVPSRQ 124

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
             + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHI
Sbjct: 125 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHI 184

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           FRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  +  +L +G+RRA R Q  +PSSV+SS
Sbjct: 185 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSS 244

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRF 325
            SMHLG+LA A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M F
Sbjct: 245 DSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           E EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    
Sbjct: 305 ETEESSVRRYMGTITGICDLDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 364

Query: 386 PALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRG 445
           P     P P P R +    P  P    L  +    + +  SS   + R LQ   F  + G
Sbjct: 365 PM---YPSPFPLRLKRPWPPGLPSFHGLKED---DMGMSMSSPLMWDRGLQSLNFQGMGG 418

Query: 446 N 446
           N
Sbjct: 419 N 419


>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
          Length = 396

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/372 (55%), Positives = 268/372 (72%), Gaps = 12/372 (3%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKIL 100
           +  L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y +LP +++
Sbjct: 3   QKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLI 62

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFCKTLT 156
           C++ NV + A+ +TDEV+AQ+TL P S Q+     K+P  P       +   + FCKTLT
Sbjct: 63  CQLHNVTMHADAETDEVYAQMTLQPLSPQEL----KDPFLPAELGTASKQPTNYFCKTLT 118

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP+RHLL
Sbjct: 119 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLL 178

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFVS+KRLVAGD+ +F+  ++ +L +G+RRA R Q  +PSSV+SS SMH+G+LA 
Sbjct: 179 TTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 238

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRF 335
           A HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+
Sbjct: 239 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRY 298

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP- 394
            GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P 
Sbjct: 299 MGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPL 357

Query: 395 RPKRPRSNMLPS 406
           R KRP    LPS
Sbjct: 358 RLKRPWPTGLPS 369


>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
          Length = 836

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/367 (55%), Positives = 263/367 (71%), Gaps = 5/367 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  L  +++C+
Sbjct: 19  CLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDTS 161
           + NV + A+ +TDEV+AQ+TL P S Q++  V   P     P +   + FCKTLTASDTS
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTASDTS 138

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  PPLD ++QPP QEL A+DLHGNEW+FRHIFRGQP+RHLL +GWS
Sbjct: 139 THGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWS 198

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRL+AGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 199 VFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAA 258

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPSEF++P  +Y +++ +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 259 ATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 318

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRP 399
           GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP
Sbjct: 319 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRLKRP 377

Query: 400 RSNMLPS 406
             + LPS
Sbjct: 378 WPSALPS 384


>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 908

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/382 (54%), Positives = 266/382 (69%), Gaps = 10/382 (2%)

Query: 28  SNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD 87
           ++ T  G KR       L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D
Sbjct: 9   THQTQEGEKR------CLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVD 62

Query: 88  QQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF 146
             +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P S Q++           P + 
Sbjct: 63  AHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQ 122

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
             + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHI
Sbjct: 123 PSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 182

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           FRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS
Sbjct: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSS 242

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRF 325
            SMHLG+LA A HA +T + FT++Y PR SPSEF++P  +Y +++ +   S+GMRF+M F
Sbjct: 243 DSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLF 302

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           E EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    
Sbjct: 303 ETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362

Query: 386 PALNSLPMP-RPKRPRSNMLPS 406
           P   S P P R KRP    LPS
Sbjct: 363 PMYPS-PFPLRLKRPWPPGLPS 383


>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
          Length = 895

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/365 (54%), Positives = 261/365 (71%), Gaps = 2/365 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P +  LP +++C+
Sbjct: 19  VLNSELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKEVDAHIPNHPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P + Q++           P +   + FCKTLTASDTST
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD ++QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA RQQ  +PSSV+SS SMHLG+LA A HA +
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSVLSSDSMHLGLLAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFRMLFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           I D DP RW +S WR +KV WDE++   R  RVSLW++EP    P   S    R KRP +
Sbjct: 319 ISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPLTTFPMYPSPFQLRLKRPWT 378

Query: 402 NMLPS 406
             LPS
Sbjct: 379 PGLPS 383


>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
 gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
          Length = 895

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/369 (54%), Positives = 268/369 (72%), Gaps = 12/369 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 21  CLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----PPPRFHVHSFCKTLTAS 158
           + NV + A+ +T+EV+AQ+TL P S +++    KEP  P       +   + FCKTLTAS
Sbjct: 81  LHNVTMHADAETEEVYAQMTLQPLSPEEQ----KEPFLPIELGAGSKQPTNYFCKTLTAS 136

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +
Sbjct: 137 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTT 196

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 197 GWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 256

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 257 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 316

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLPMPRP 396
           TI GI D D +RW +S WR +KV WDE++   +  RVSLW+IEP    P    + P+ R 
Sbjct: 317 TITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPMYPTAFPL-RL 375

Query: 397 KRPRSNMLP 405
           KRP ++ LP
Sbjct: 376 KRPWASGLP 384


>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 916

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/370 (55%), Positives = 262/370 (70%), Gaps = 12/370 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  D  +P Y  LP +++C+
Sbjct: 19  VLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P + Q++    KEP  P     P +   + FCKTLTAS
Sbjct: 79  LHNVTMHADIETDEVYAQMTLQPLTAQEQ----KEPYLPAELGAPSKQPTNYFCKTLTAS 134

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ IF+  E  +L +G+RRA R Q  +PSSV+SS SMHLG+LA A 
Sbjct: 195 GWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR SPSEFI+P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RP 396
           TI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P R 
Sbjct: 315 TITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRL 373

Query: 397 KRPRSNMLPS 406
           KRP     PS
Sbjct: 374 KRPWPTGFPS 383


>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
          Length = 913

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/375 (54%), Positives = 265/375 (70%), Gaps = 22/375 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y +LP +++C+
Sbjct: 26  CLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQLICQ 85

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDEN---------AVEKEPPPPPPPRFHVHSFCK 153
           + NV + A+ +TDEV+AQ+TL P + Q+           +  K+P          + FCK
Sbjct: 86  LHNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQP---------TNYFCK 136

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGNEW+FRHIFRGQP+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKR 196

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+
Sbjct: 197 HLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGL 256

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPE 332
           LA A HA ST + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  
Sbjct: 257 LAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSV 316

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P
Sbjct: 317 RRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-P 375

Query: 393 MP-RPKRPRSNMLPS 406
            P R KRP    LPS
Sbjct: 376 FPLRLKRPWPTGLPS 390


>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 372

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/368 (55%), Positives = 257/368 (69%), Gaps = 20/368 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           +L +ELWHACAGPLV++P  G RV YFPQGHIEQV AST + AD  +P Y  LPSKI+C 
Sbjct: 5   SLNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSKIICL 64

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA--------VEKEPPPPPPPRFHVHSFCKT 154
           + NV L A+P+TDEV+AQ+ LLP    ++ A        V K+P            FCKT
Sbjct: 65  LDNVTLHADPETDEVYAQMILLPIQISEKEALLSPDLEVVNKQP---------TEYFCKT 115

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFS+ RR A++  PPLD +R PP QEL A+DLH  EW FRHI+RGQPRRH
Sbjct: 116 LTASDTSTHGGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRH 175

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFVS+KRL AGD+ +F+R + G L +G+RRA RQQ  +PSSV+SS SMH GVL
Sbjct: 176 LLTTGWSVFVSAKRLQAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFGVL 235

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQ 333
           A A HA +T + F ++Y PR SPSEF++P  +Y +++ N  +++GMRF+M FE EE+  +
Sbjct: 236 AAASHAAATSSRFKIFYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESSVR 295

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R+ GTI G+ D DP RW  S WR LKV WDE++   R  RVSLW+IEP   P  L   P+
Sbjct: 296 RYVGTITGLGDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPLTTPFLLCPPPL 355

Query: 394 P-RPKRPR 400
             R KRPR
Sbjct: 356 ALRSKRPR 363


>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
          Length = 916

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/370 (55%), Positives = 262/370 (70%), Gaps = 12/370 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  D  +P Y  LP +++C+
Sbjct: 19  VLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P + Q++    KEP  P     P +   + FCKTLTAS
Sbjct: 79  LHNVTMHADIETDEVYAQMTLQPLTAQEQ----KEPYLPAELGAPSKQPTNYFCKTLTAS 134

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ IF+  E  +L +G+RRA R Q  +PSSV+SS SMHLG+LA A 
Sbjct: 195 GWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR SPSEFI+P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RP 396
           TI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P R 
Sbjct: 315 TITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRL 373

Query: 397 KRPRSNMLPS 406
           KRP     PS
Sbjct: 374 KRPWPTGFPS 383


>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
 gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
          Length = 471

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/392 (49%), Positives = 263/392 (67%), Gaps = 26/392 (6%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQ  AS +     ++P YDL  +I CRV+N
Sbjct: 52  YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQF-ASFSPFKQLEIPNYDLQPQIFCRVVN 110

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----------PPPRFHVHSFCKTL 155
           VQL A  + DEV+ QVTLLP++      +E +               P +   H FCKTL
Sbjct: 111 VQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTL 170

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           T SDTSTHGGFSV RR A++C PPLD   Q P+QEL AKDLHG EW+FRHI+RGQPRRHL
Sbjct: 171 TVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 230

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLR--------------GENGELRVGVRRAMRQQGNVPS 261
           L +GWS+FV+ K LV+GDA +FLR              G+NGELR+G+RRA+R +  +P 
Sbjct: 231 LTTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRRAVRPRNGLPE 290

Query: 262 SVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRF 321
           S++ + + +   L++  +A+ST +MF V+Y PR S +EF+VPY +Y++SIKN  +IG RF
Sbjct: 291 SIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRF 350

Query: 322 KMRFEGEEAPEQRF-TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           KMR E +E+PE+R  +G ++GI D DP RW  SKWRCL VRWD+ +     +RVS W+I+
Sbjct: 351 KMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEID 410

Query: 381 PALAPPALNSLPMPRPKRPRSNMLPSSPDSSV 412
           P+   P L+    PR K+PR+ +L +SP+  +
Sbjct: 411 PSSPQPPLSIQSSPRLKKPRTGLLVASPNHLI 442


>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
 gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
          Length = 478

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/366 (55%), Positives = 261/366 (71%), Gaps = 4/366 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  LP +++C+
Sbjct: 19  VLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P S Q++           P +   + FCKTLTASDTST
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGTPNKQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG+LA A HA +
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRPR 400
           I D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP 
Sbjct: 319 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRLKRPW 377

Query: 401 SNMLPS 406
              LPS
Sbjct: 378 PPGLPS 383


>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 884

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/376 (54%), Positives = 264/376 (70%), Gaps = 10/376 (2%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G KRV D      +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  D  +P Y
Sbjct: 15  GEKRVLD------SELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNY 68

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFC 152
             LP +++C++ NV + A+ +TDEV+AQ+TL P + Q++           P +   + FC
Sbjct: 69  PSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFC 128

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           K LTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLHGNEW+FRHIFRGQP+
Sbjct: 129 KILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPK 188

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG
Sbjct: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLG 248

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAP 331
           +LA A HA +T + FT++Y PR SPSEF++P+ +Y++++ +   S+GMRF+M FE EE+ 
Sbjct: 249 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESS 308

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
            +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S 
Sbjct: 309 VRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS- 367

Query: 392 PMP-RPKRPRSNMLPS 406
           P P R KRP    LPS
Sbjct: 368 PFPLRLKRPWPPGLPS 383


>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
 gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
          Length = 881

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 206/384 (53%), Positives = 265/384 (69%), Gaps = 17/384 (4%)

Query: 41  PEMA------LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY- 93
           PEMA      L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  +  +P Y 
Sbjct: 12  PEMAAGEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYP 71

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-----PPPPPRFHV 148
            LP +++C++ NV + A+ +TDEV+AQ+TL P + Q++  V   P         P  +  
Sbjct: 72  GLPPQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTLSKQPSNY-- 129

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
             FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL  KDLHGNEW+FRHIFR
Sbjct: 130 --FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFR 187

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQP+RHLL +GWSVFVS+KRLVAGD+ IF+  EN +L +G+RRA R Q  +PSSV+SS S
Sbjct: 188 GQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDS 247

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEG 327
           MH+G+LA A HA +T + FT+++ PR  PSEF++P  +Y +++ +   S+GMRF+M FE 
Sbjct: 248 MHIGLLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFQMLFET 307

Query: 328 EEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPA 387
           EE+  +R+ GTI GI D DP RW +S W+ +KV WDE++   R  RVSLW+IEP    P 
Sbjct: 308 EESSIRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 367

Query: 388 LNSLPMPRPKRPRSNMLPSSPDSS 411
             S    R KRP    LPS P  S
Sbjct: 368 YPSPFSLRLKRPWPPGLPSFPGLS 391


>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
 gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
 gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
 gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
          Length = 935

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/382 (54%), Positives = 269/382 (70%), Gaps = 18/382 (4%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
            +G KRV      L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P
Sbjct: 15  VTGEKRV------LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIP 68

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRF 146
            Y  L  +++C++ NV + A+ +TDEV+AQ+TL P + Q++    K+P  P     P R 
Sbjct: 69  NYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQ----KDPYLPAELGVPSRQ 124

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
             + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHI
Sbjct: 125 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHI 184

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           FRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  +  +L +G+RRA R Q  +PSSV+SS
Sbjct: 185 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSS 244

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRF 325
            SMHLG+LA A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M F
Sbjct: 245 DSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLF 304

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           E EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    
Sbjct: 305 ETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 364

Query: 386 PALNSLPMP-RPKRPRSNMLPS 406
           P   S P P R KRP    LPS
Sbjct: 365 PMYPS-PFPLRLKRPWPPGLPS 385


>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/390 (48%), Positives = 265/390 (67%), Gaps = 10/390 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE +YYFPQGHIE +EAST    DQ  P +DLPSK+ C V 
Sbjct: 24  MYEQLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHFDLPSKLRCCVD 83

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           ++QLK + +TD+V+A++ L+P++      +       P     V+SF K LT+SD +THG
Sbjct: 84  DIQLKIDQNTDDVYAEIYLMPDTTDVITPITTMDNQRP----MVYSFSKILTSSDANTHG 139

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           G S+L+RHA ECLPPLDMS++ P Q L AKDLHG EW F+H FRG PRRHL  SGWS+F 
Sbjct: 140 GLSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFA 199

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           ++KRL+ GDAF+FLRGENGEL VG+RRA  Q G+ PS VIS+  M  GV+A+  +A  + 
Sbjct: 200 TTKRLIVGDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVIASVVNAFKSK 259

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
             F V YKP  S S+F+V YD++++++ N + +G RF+MRFEG++  E+R++GTI+G+ D
Sbjct: 260 CKFIVVYKP--SSSQFVVNYDKFVDAMNNKFIVGSRFRMRFEGQDFSEKRYSGTIIGVND 317

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNML 404
             P  W+DS+WR L+V+WDE S  PRP++VS W+IE  +   +++   + + KR R    
Sbjct: 318 MSPH-WKDSEWRSLQVQWDELSPFPRPDKVSPWEIEHLIPSSSISQPTVLQKKRARQCNE 376

Query: 405 PSSPDSSVLTRE--GSSKLNVDPSSATGFS 432
             S  S++LT +  G S L+  P S   FS
Sbjct: 377 IGSTSSNLLTGQEIGQSSLS-SPKSVPEFS 405


>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
 gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
 gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
 gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
          Length = 899

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/368 (54%), Positives = 265/368 (72%), Gaps = 10/368 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P    RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 24  CLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 83

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----PPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P S +++    KEP  P       +   + FCKTLTAS
Sbjct: 84  LHNVTMHADAETDEVYAQMTLQPLSPEEQ----KEPFLPMELGAASKQPTNYFCKTLTAS 139

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +
Sbjct: 140 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 199

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA RQQ  +PSSV+SS SMH+G+LA A 
Sbjct: 200 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAA 259

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 260 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 319

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI  I D D  RW +S WR +KV WDE++T  +  RVSLW+IEP    P   S    R K
Sbjct: 320 TITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLK 379

Query: 398 RPRSNMLP 405
           RP ++ LP
Sbjct: 380 RPWASGLP 387


>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
          Length = 899

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/370 (54%), Positives = 266/370 (71%), Gaps = 10/370 (2%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKIL 100
           +  L +ELWHACAGPLV++P    RV YFPQGH EQV ASTN+  D Q+P Y +LP +++
Sbjct: 22  QRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 81

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----PPPRFHVHSFCKTLT 156
           C++ NV + A+ +TDEV+AQ+TL P S +++    KEP  P       +   + FCKTLT
Sbjct: 82  CQLHNVTMHADAETDEVYAQMTLQPLSPEEQ----KEPFLPMELGAASKQPTNYFCKTLT 137

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 197

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA RQQ  +PSSV+SS SMH+G+LA 
Sbjct: 198 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAA 257

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRF 335
           A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+
Sbjct: 258 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 317

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
            GTI  I D D  RW +S WR +KV WDE++T  +  RVSLW+IEP    P   S    R
Sbjct: 318 MGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLR 377

Query: 396 PKRPRSNMLP 405
            KRP ++ LP
Sbjct: 378 LKRPWASGLP 387


>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
          Length = 880

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/370 (54%), Positives = 266/370 (71%), Gaps = 10/370 (2%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKIL 100
           +  L +ELWHACAGPLV++P    RV YFPQGH EQV ASTN+  D Q+P Y +LP +++
Sbjct: 3   QRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 62

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----PPPRFHVHSFCKTLT 156
           C++ NV + A+ +TDEV+AQ+TL P S +++    KEP  P       +   + FCKTLT
Sbjct: 63  CQLHNVTMHADAETDEVYAQMTLQPLSPEEQ----KEPFLPMELGAASKQPTNYFCKTLT 118

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL
Sbjct: 119 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 178

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA RQQ  +PSSV+SS SMH+G+LA 
Sbjct: 179 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAA 238

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRF 335
           A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+
Sbjct: 239 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 298

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
            GTI  I D D  RW +S WR +KV WDE++T  +  RVSLW+IEP    P   S    R
Sbjct: 299 MGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLR 358

Query: 396 PKRPRSNMLP 405
            KRP ++ LP
Sbjct: 359 LKRPWASGLP 368


>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
 gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
 gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
 gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
          Length = 933

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/380 (54%), Positives = 268/380 (70%), Gaps = 18/380 (4%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G KRV      L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y
Sbjct: 15  GEKRV------LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNY 68

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHV 148
             L  +++C++ NV + A+ +TDEV+AQ+TL P + Q++    K+P  P     P R   
Sbjct: 69  PSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQ----KDPYLPAELGVPSRQPT 124

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFR
Sbjct: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFR 184

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQP+RHLL +GWSVFVS+KRLVAGD+ +F+  +  +L +G+RRA R Q  +PSSV+SS S
Sbjct: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDS 244

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEG 327
           MHLG+LA A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE 
Sbjct: 245 MHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 304

Query: 328 EEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPA 387
           EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P 
Sbjct: 305 EESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364

Query: 388 LNSLPMP-RPKRPRSNMLPS 406
             S P P R KRP    LPS
Sbjct: 365 YPS-PFPLRLKRPWPPGLPS 383


>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
          Length = 897

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/369 (53%), Positives = 266/369 (72%), Gaps = 12/369 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 21  CLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPPRFHVHSFCKTLTAS 158
           + NV + A+ +T+EV+AQ+TL P S +++      +E       P  +    FCKTLTAS
Sbjct: 81  LHNVTMHADAETEEVYAQMTLQPLSPEEQKDPFLPIELGAGSKQPTNY----FCKTLTAS 136

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +
Sbjct: 137 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTT 196

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 197 GWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAA 256

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 257 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 316

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLPMPRP 396
           TI GI D D +RW +S WR +KV WDE++   +  RVSLW+IEP    P    + P+ R 
Sbjct: 317 TITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPMYPTAFPL-RL 375

Query: 397 KRPRSNMLP 405
           KRP ++ LP
Sbjct: 376 KRPWASGLP 384


>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
 gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
          Length = 827

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/384 (52%), Positives = 269/384 (70%), Gaps = 5/384 (1%)

Query: 31  TTSGV--KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           +TSG+  ++ G+ +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D 
Sbjct: 4   STSGLGGQQAGEKK-CLNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEVDA 62

Query: 89  QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH 147
            +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + Q++           P +  
Sbjct: 63  HIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMDLGMPSKQP 122

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
            + FCKTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL A+DLH  EW+FRHIF
Sbjct: 123 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIF 182

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS 
Sbjct: 183 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSD 242

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFE 326
           SMH+G+LA A HA +T + FTV+Y PR SPSEF++P  +Y++++     S+GMRF+M FE
Sbjct: 243 SMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRMLFE 302

Query: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
            EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P
Sbjct: 303 TEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362

Query: 387 ALNSLPMPRPKRPRSNMLPSSPDS 410
              SL   R KRP     PS  DS
Sbjct: 363 MYPSLFPLRLKRPWHPGSPSLLDS 386


>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
          Length = 907

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/375 (53%), Positives = 263/375 (70%), Gaps = 22/375 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y +LP +++C+
Sbjct: 27  CLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQLICQ 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDEN---------AVEKEPPPPPPPRFHVHSFCK 153
           + NV + A+P+TDEV+AQ+TL P + Q+              K+P          + FCK
Sbjct: 87  LHNVTMNADPETDEVYAQMTLQPLNPQELKDPYLPAELGTANKQP---------TNYFCK 137

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSV RR A++  PPLD + QPP QEL AKDLHGNEW+FRHIFRGQP+R
Sbjct: 138 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTLQPPAQELFAKDLHGNEWKFRHIFRGQPKR 197

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWSVFVS+KRLVAGD+ +F+  ++ +L +G+RRA R Q  +PSSV+SS SMH+G+
Sbjct: 198 HLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRATRPQTVMPSSVLSSDSMHIGL 257

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPE 332
           LA A HA ST + FT++Y PR SP EF++P  +Y++++ +   S+GMRF+M FE EE+  
Sbjct: 258 LAAAAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSV 317

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P +   P
Sbjct: 318 RRYMGTITGISDLDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPTP 376

Query: 393 MP-RPKRPRSNMLPS 406
            P R KRP    LPS
Sbjct: 377 FPLRLKRPWPTGLPS 391


>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
 gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
          Length = 908

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/376 (53%), Positives = 263/376 (69%), Gaps = 10/376 (2%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G KRV D      +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  D  +P Y
Sbjct: 15  GEKRVLD------SELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNY 68

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFC 152
             LP +++C++ N+ + A+ +TDEV+AQ+TL P + Q++           P +   + FC
Sbjct: 69  PSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFC 128

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLHGNEW+FRHIFRGQP+
Sbjct: 129 KTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPK 188

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG
Sbjct: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLG 248

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAP 331
           +LA A HA +T + FT++Y PR  PSEF++P  +Y++++ +   S+GMRF+M FE EE+ 
Sbjct: 249 LLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS 308

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
            +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S 
Sbjct: 309 VRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS- 367

Query: 392 PMP-RPKRPRSNMLPS 406
           P P R KRP    LPS
Sbjct: 368 PFPLRLKRPWPPGLPS 383


>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
          Length = 868

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/375 (53%), Positives = 262/375 (69%), Gaps = 11/375 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           +L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  +  +P Y  LP +++C+
Sbjct: 8   SLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQ 67

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-----PPPPPRFHVHSFCKTLTA 157
           + NV + A+ +TDEV+AQ+TL P + Q++  V   P         P  +    FCKTLTA
Sbjct: 68  LHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTLSKQPSNY----FCKTLTA 123

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++  PPLD S+QPP QEL  KDLHGNEW+FRHIFRGQP+RHLL 
Sbjct: 124 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLT 183

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWSVFVS+KRLVAGD+ IF+  EN +L +G+RRA R Q  +PSSV+SS SMH+G+LA A
Sbjct: 184 TGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAA 243

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFT 336
            HA +T + FT+++ PR  PSEF++P  +Y +++ +   S+GMRF+M FE EE+  +R+ 
Sbjct: 244 AHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSIRRYM 303

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTI GI D DP RW +S W+ +KV WDE++   R  RVSLW+IEP    P   S    R 
Sbjct: 304 GTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFSLRL 363

Query: 397 KRPRSNMLPSSPDSS 411
           KRP    LPS P  S
Sbjct: 364 KRPWPPGLPSFPGLS 378


>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
          Length = 924

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/340 (56%), Positives = 250/340 (73%), Gaps = 2/340 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           +L +ELWHACAGPLV +P  G  V YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 16  SLNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQ 75

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L+A+ +TDEV+AQ+TL P + Q+       P    P     + FCKTLTASDTST
Sbjct: 76  LHNVTLQADVETDEVYAQMTLQPLNPQEPKESYLAPALGTPSGQPTNYFCKTLTASDTST 135

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFS+ RR A++  P LD ++QPP QEL A+DLH  EW+FRHI+RGQP+RHLL +GWSV
Sbjct: 136 HGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKRHLLTTGWSV 195

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+R + G+L +G+RRA R Q  +PSSV+SS SMH+GVLA A HA S
Sbjct: 196 FVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIGVLAAAAHAAS 255

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T   FT++Y PR SPSEF+VP  ++ +++ +   SIGMRF+M FE EE+  +R+ GTI G
Sbjct: 256 TNCRFTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEESTVRRYMGTITG 315

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP 381
           I D DP RWR+S+WR +KV WDE++   R  RVSLW+IEP
Sbjct: 316 IGDLDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEP 355


>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/382 (54%), Positives = 266/382 (69%), Gaps = 10/382 (2%)

Query: 28  SNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD 87
           ++ T  G KR       L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D
Sbjct: 9   THQTQEGEKR------CLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVD 62

Query: 88  QQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF 146
             +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P S Q++           P + 
Sbjct: 63  AHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQ 122

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
             + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHI
Sbjct: 123 PSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 182

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           FRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS
Sbjct: 183 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSS 242

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRF 325
            SMHLG+LA A HA +T + FT++Y PR SPSEF++P  +Y +++ +   S+GMRF+M F
Sbjct: 243 DSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLF 302

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           E EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    
Sbjct: 303 ETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 362

Query: 386 PALNSLPMP-RPKRPRSNMLPS 406
           P   S P P R KRP    LPS
Sbjct: 363 PMYPS-PFPLRLKRPWPPGLPS 383


>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
 gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
          Length = 911

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/385 (53%), Positives = 269/385 (69%), Gaps = 27/385 (7%)

Query: 39  GDPEMA-----LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G PE A     L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y
Sbjct: 16  GSPEEAEEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNY 75

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHV 148
             LP +++C++ NV + A+ +TDEV+AQ+TL P S Q+     K+P  P       +   
Sbjct: 76  PSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEL----KDPFLPAELGTASKQPT 131

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           + FCKTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL A DLHGNEW+FRHIFR
Sbjct: 132 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFR 191

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQP+RHLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV+SS S
Sbjct: 192 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDS 251

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEG 327
           MH+G+LA A HA ST + FT++Y PR SP EF++P  +Y++++ +   S+GMRF+M FE 
Sbjct: 252 MHIGLLAAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFET 311

Query: 328 EEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPA 387
           EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   +  RVSLW+IEP      
Sbjct: 312 EESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP------ 365

Query: 388 LNSLPM-PRP-----KRPRSNMLPS 406
           L + PM P P     KRP    LPS
Sbjct: 366 LTTFPMYPSPFALGLKRPWPTGLPS 390


>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 590

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/343 (60%), Positives = 245/343 (71%), Gaps = 31/343 (9%)

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           +P PP   R  V  FCK LTASDTSTHGGFSVLR+HA ECLPPLDMS+  PTQELAAKDL
Sbjct: 8   DPEPPERTRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQELAAKDL 67

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HG EW+F+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRG+NGELRVGVRR  RQQ
Sbjct: 68  HGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQ 127

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
             +PSSVISSHSMHLGVLATA HAV T T F VYYKPRT  S+FI+  ++Y+E++KN Y 
Sbjct: 128 SLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKPRT--SQFIISLNKYLETVKNGYE 185

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +GMRFKMRFEGEE+PE+RFTGTIVG+ D  PQ W DSKWR LK++WDE +TI RPERVS 
Sbjct: 186 VGMRFKMRFEGEESPERRFTGTIVGVGDMSPQ-WSDSKWRSLKIQWDEPATIQRPERVSP 244

Query: 377 WKIEPALAPPALN-SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVL 435
           W+IEP +   +LN + P  + KR R   +P    +S              S+ +GF   L
Sbjct: 245 WEIEPFVPSASLNFTHPAIKSKRARPVEIPPPEVTS-------------GSAPSGF--WL 289

Query: 436 QG----QEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKID 474
           QG     E S L G      +NE  ++   VVW  +L   K+D
Sbjct: 290 QGSTISHEISQLSG------TNEVQSSNNRVVW--ALGQRKLD 324


>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
 gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
          Length = 841

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/374 (53%), Positives = 264/374 (70%), Gaps = 5/374 (1%)

Query: 31  TTSGVKRVG---DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD 87
           +TSG+ + G     +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D
Sbjct: 4   STSGMSQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREID 63

Query: 88  QQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF 146
            Q+P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + Q++           P + 
Sbjct: 64  GQIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQ 123

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
             + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+FRHI
Sbjct: 124 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHI 183

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           FRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS
Sbjct: 184 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSS 243

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRF 325
            SMH+G+LA A HA +T + FTV++ PR SPSEF++P  +Y++++ +   S+GMRF+M F
Sbjct: 244 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLF 303

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           E EE+  +R+ GTI  I D DP RW +S WR +KV WDE++   R  RVSLW+IEP    
Sbjct: 304 ETEESSVRRYMGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 363

Query: 386 PALNSLPMPRPKRP 399
           P   SL   R KRP
Sbjct: 364 PMYPSLFPLRLKRP 377


>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 875

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/372 (54%), Positives = 261/372 (70%), Gaps = 4/372 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQV-EASTNQVADQQMPVY-DLPSKILC 101
           +L +ELWHACAGPLV++P  G RV YFPQGH EQV  AST + AD  +P Y +LPS+++C
Sbjct: 7   SLNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSRLVC 66

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
            + NV L A+ +TDEV+AQ+TL+P    +E      P      R     FCKTLTASDTS
Sbjct: 67  LLDNVTLHADLETDEVYAQMTLIPVLPANEKEALISPDIGMRSRQPTEYFCKTLTASDTS 126

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFS+ RR A++  PPLD ++ PP QEL A+DLH  EW FRHI+RGQPRRHLL +GWS
Sbjct: 127 THGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTTGWS 186

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRL AGDA +F+R + G+L++G+RR  RQQ  +PSSV+SS SMH+GVLA A HA 
Sbjct: 187 VFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAANHAA 246

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKN-NYSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPSEF++P  +Y ++I +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 247 ATSSRFTIFYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESSVRRYMGTIT 306

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRP 399
           G+ D DP RW +S WR LKV WDE++   R  RVSLW+IEP   P  L   P+  R KRP
Sbjct: 307 GMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLLCPPPVAFRTKRP 366

Query: 400 RSNMLPSSPDSS 411
           R     +S  SS
Sbjct: 367 RGGRDSTSKKSS 378


>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 842

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/377 (53%), Positives = 266/377 (70%), Gaps = 12/377 (3%)

Query: 31  TTSGVKRVG--DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           +TSG+ + G    +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D 
Sbjct: 4   STSGLGQQGHEGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDG 63

Query: 89  QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPP 143
            +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + Q++      +E   P   P
Sbjct: 64  HIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQP 123

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
             +    FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+F
Sbjct: 124 SNY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 179

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
           RHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSV 239

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFK 322
           +SS SMH+G+LA A HA +T + FTV+Y PR SPSEF++P  +Y++++ +   S+GMRF+
Sbjct: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFR 299

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           M FE EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP 
Sbjct: 300 MLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359

Query: 383 LAPPALNSLPMPRPKRP 399
              P   SL   R KRP
Sbjct: 360 TTFPMYPSLFPLRLKRP 376


>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 597

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/363 (51%), Positives = 257/363 (70%), Gaps = 22/363 (6%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE +EA T +  ++  P++DLPSK+ CRVI
Sbjct: 25  MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELIEAYTREELNKIQPIFDLPSKLQCRVI 84

Query: 105 NVQLKAEPDTDEVFAQVTLLPES-----NQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
            +QLK E ++DE +A++TL+P++      Q++N            R  V+SF K LTASD
Sbjct: 85  AIQLKVEKNSDETYAEITLMPDTQVVIPTQNDNHY----------RPLVNSFTKVLTASD 134

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TS HGGFSV R+ A ECLPPLDMS+  P QEL   DLHGN+WRF+H +RG PRRHLL SG
Sbjct: 135 TSVHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTSG 194

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           W+ F +SK+LVAGD  +FLRGE GELRVG+RRA  QQ N+ SS+IS  SM  GV+A+A H
Sbjct: 195 WNAFTTSKKLVAGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDSMRHGVIASAVH 254

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           A +   MF V YKPR+  S+FIV Y+++++++ N +++G RF MRFEGE+  E+R++GTI
Sbjct: 255 AFNNQCMFIVVYKPRS--SQFIVSYNKFVDAVNNKFNVGSRFTMRFEGEDFSERRYSGTI 312

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL--PMPRPK 397
           +G+ +     W +S+WR L+V+WDE ++ PRP++VS W IE     P+LN L   + + K
Sbjct: 313 IGVNNFSSH-WMESEWRSLEVKWDEFASFPRPDKVSPWDIEH--LTPSLNVLRPSLLKNK 369

Query: 398 RPR 400
           R R
Sbjct: 370 RSR 372


>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 846

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/377 (53%), Positives = 266/377 (70%), Gaps = 12/377 (3%)

Query: 31  TTSGVKRVG--DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           +TSG+ + G    +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D 
Sbjct: 4   STSGLGQQGHEGEKKCLNSELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNREVDG 63

Query: 89  QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPP 143
            +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + Q++      +E   P   P
Sbjct: 64  HIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQP 123

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
             +    FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+F
Sbjct: 124 SNY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 179

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
           RHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSV 239

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFK 322
           +SS SMH+G+LA A HA +T + FTV+Y PR SPSEF++P  +Y++++ +   S+GMRF+
Sbjct: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFR 299

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           M FE EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP 
Sbjct: 300 MLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359

Query: 383 LAPPALNSLPMPRPKRP 399
              P   SL   R KRP
Sbjct: 360 TTFPMYPSLFPLRLKRP 376


>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
 gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
          Length = 914

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/371 (53%), Positives = 259/371 (69%), Gaps = 8/371 (2%)

Query: 31  TTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM 90
           T  G KRV      L +ELWHACAGPLV++P  G RV YF QGH EQV ASTN+  D ++
Sbjct: 12  TQEGEKRV------LNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARI 65

Query: 91  PVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH 149
           P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P S Q++           P +   +
Sbjct: 66  PNYPSLPPQLICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTN 125

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRG
Sbjct: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QP+RHLL +GWSVFVS+KRL+AGD+ +F+  E  +L +G++RA R Q  +PSSV+SS SM
Sbjct: 186 QPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIKRATRPQTVMPSSVLSSDSM 245

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGE 328
           HLG+LA A HA +T + FT++Y PR SPSEFI+P  +Y++++     S+GMRF+M FE E
Sbjct: 246 HLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYLKAVYYTRVSVGMRFRMLFETE 305

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           E+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P  
Sbjct: 306 ESSVRRYMGTITGISDLDVARWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 365

Query: 389 NSLPMPRPKRP 399
            S    R KRP
Sbjct: 366 PSTFPLRLKRP 376


>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
          Length = 297

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/285 (67%), Positives = 229/285 (80%), Gaps = 3/285 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM-PVYDLPSKILCRV 103
           LY ELW  CAGPLV VP+  ERVYYFPQGH+EQ+EAST QV    M P++ LP KILC V
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AE DTDEV+AQ+TL+P   + +  +  +P PP   R  VHSF K LTASDTSTH
Sbjct: 69  MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 128

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVLR+HA ECLPPLDM++Q PTQEL A+D+HG +W+F+HIFRGQPRRHLL +GWS F
Sbjct: 129 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTF 188

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           V+SKRLVAGD F+FLRGENGELRVGVRRA  QQ ++PSSVISSHSMHLGVLATA HA  T
Sbjct: 189 VTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQT 248

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
            TMF VYYKPRT  S+FI+  ++Y+E++ N +S+GMRFKMR  GE
Sbjct: 249 KTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRLWGE 291


>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
          Length = 907

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/367 (54%), Positives = 260/367 (70%), Gaps = 5/367 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  LP +++C+
Sbjct: 23  CLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQ 82

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDTS 161
           + NV + A+ +TDEV+AQ+TL P S  D+      P       +   + FCKTLTASDTS
Sbjct: 83  LHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQPTNYFCKTLTASDTS 142

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  P LD S+ PP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWS
Sbjct: 143 THGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWS 202

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA 
Sbjct: 203 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAAHAA 262

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 263 ATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 322

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLPMPRPKRP 399
           GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   ++ PM R KRP
Sbjct: 323 GISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSAFPM-RLKRP 381

Query: 400 RSNMLPS 406
             + LPS
Sbjct: 382 WPSGLPS 388


>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
          Length = 846

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/362 (54%), Positives = 257/362 (70%), Gaps = 10/362 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y  LP +++C+
Sbjct: 20  CLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQ 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P + Q++      VE   P   P  +    FCKTLTAS
Sbjct: 80  LHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNY----FCKTLTAS 135

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+FRHIFRGQP+RHLL +
Sbjct: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 195

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ G
Sbjct: 256 HAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 315

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL   R K
Sbjct: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 375

Query: 398 RP 399
           RP
Sbjct: 376 RP 377


>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 891

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/370 (54%), Positives = 265/370 (71%), Gaps = 12/370 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 23  CLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 82

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----PPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P S +++    KEP  P       +   + FCKTLTAS
Sbjct: 83  LHNVTMHADAETDEVYAQMTLQPLSPEEQ----KEPFLPIELGAASKQPTNYFCKTLTAS 138

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S QPP QEL AKDLH NEW+FRHIFRGQP+RHLL +
Sbjct: 139 DTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHLLTT 198

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ IF+  +N +L +G+R A R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 199 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSVLSSDSMHIGLLAAAA 258

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR SPSEFI+P  +Y++S+ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 259 HAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMG 318

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLPMPRP 396
           TI  I D D  RW +S WR +KV WDE++   +  RVSLW+IEP    P    + P+ R 
Sbjct: 319 TITTISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPTAFPL-RL 377

Query: 397 KRPRSNMLPS 406
           KRP ++ +PS
Sbjct: 378 KRPWASGMPS 387


>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
          Length = 771

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/416 (47%), Positives = 271/416 (65%), Gaps = 29/416 (6%)

Query: 46  YTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVIN 105
           Y ELWHACAGPL ++P++G  V YFPQGH+EQ  AS +  +   +P YDL  +I C+V N
Sbjct: 42  YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQA-ASFSPFSPLDVPTYDLHPQIFCKVAN 100

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEK----------EPPPPPPPRFHVHSFCKTL 155
           VQL A  + DEV+ QVTLLP++  +   +E           E     P +   H FCKTL
Sbjct: 101 VQLLANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKSTPHMFCKTL 160

Query: 156 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHL 215
           TASDTSTHGGFSV RR A++C PPL    Q P+QEL AKDLHG EW+FRHI+RGQPRRHL
Sbjct: 161 TASDTSTHGGFSVPRRAAEDCFPPL----QRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 216

Query: 216 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLA 275
           L +GWS+FVS K+LV+GDA +FLRGENGELR+G+RRA R +  +P S++ + S +   L+
Sbjct: 217 LTTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPNFLS 276

Query: 276 TAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF 335
           +  +A+S  +MF V+Y PR S ++F+VPY +Y+ SIKN  ++G RFKM+F+ +E+PE+R 
Sbjct: 277 SVANAISARSMFHVFYSPRASHADFVVPYHKYVRSIKNPVTVGTRFKMKFDMDESPERRS 336

Query: 336 T----------GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           T          G + G+ D DP +W  SKWRCL VRWDE       +RVS W+++P+ + 
Sbjct: 337 TTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVDPSASL 396

Query: 386 PALNSLPMPRPKRPRSNMLPSSPDSSVL--TREGSSKLNVDPSSATGFSRVLQGQE 439
             L+     R K+PR+++   SP+  +      GS  +  + S  +   +VLQGQE
Sbjct: 397 SPLSIQASRRLKKPRTDLEADSPNHLITGSATGGSGFMGFEESVRS--PKVLQGQE 450


>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
 gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
          Length = 826

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/373 (53%), Positives = 263/373 (70%), Gaps = 4/373 (1%)

Query: 31  TTSGVKRVG--DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           +TSG+ + G    +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D 
Sbjct: 4   STSGLGQQGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDG 63

Query: 89  QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH 147
            +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + Q++           P +  
Sbjct: 64  HIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGMPSKQP 123

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
            + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+FRHIF
Sbjct: 124 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIF 183

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS 
Sbjct: 184 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSD 243

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFE 326
           SMH+G+LA A HA +T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE
Sbjct: 244 SMHIGLLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFE 303

Query: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
            EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P
Sbjct: 304 TEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363

Query: 387 ALNSLPMPRPKRP 399
              SL   R +RP
Sbjct: 364 MYPSLFPLRLRRP 376


>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
 gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
          Length = 849

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/362 (54%), Positives = 259/362 (71%), Gaps = 10/362 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D Q+P Y  LP +++C+
Sbjct: 22  CLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLVCQ 81

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P + +++      +E   P   P  +    FCKTLTAS
Sbjct: 82  LHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSKQPSNY----FCKTLTAS 137

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+FRHIFRGQP+RHLL +
Sbjct: 138 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 197

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS+FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 198 GWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 257

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FTV+Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 258 HASATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMG 317

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI GI D D  RW++S WR +KV WDE++   R  RVSLW+IEP    P   SL   R K
Sbjct: 318 TITGISDLDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 377

Query: 398 RP 399
           RP
Sbjct: 378 RP 379


>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
 gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
          Length = 844

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/358 (54%), Positives = 254/358 (70%), Gaps = 2/358 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV A+TN+  D  +P Y +LP +++C+
Sbjct: 19  CLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDIHIPNYPNLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P + Q++           P R   + FCKTLTASDTST
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S+ PP QEL A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA S
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + F V++ PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           I D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL   R KRP
Sbjct: 319 IGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376


>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 781

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/373 (53%), Positives = 267/373 (71%), Gaps = 20/373 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 21  CLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP--------PPPRFHVHSFCKT 154
           + NV + A+ +T EV+AQ+TL P S +++    KEP  P         P  +    FCKT
Sbjct: 81  LHNVTMHADAETGEVYAQMTLQPLSPEEQ----KEPFLPIELGAGSNQPTNY----FCKT 132

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S+ PP QEL A+DLH NEW+FRHIFRGQP+RH
Sbjct: 133 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRH 192

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+L
Sbjct: 193 LLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLL 252

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQ 333
           A A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +
Sbjct: 253 AAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVR 312

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLP 392
           R+ GTI  I D D +RW +S WR +KV WDE++   +  RVSLW+IEP +A P    + P
Sbjct: 313 RYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFP 372

Query: 393 MPRPKRPRSNMLP 405
           + R KRP ++ LP
Sbjct: 373 L-RLKRPWASGLP 384


>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 841

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/378 (52%), Positives = 265/378 (70%), Gaps = 13/378 (3%)

Query: 31  TTSGVKRVG---DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD 87
           +TSG+ + G     +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D
Sbjct: 4   STSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREID 63

Query: 88  QQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDEN----AVEKEPPPPP 142
             +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + Q++     ++E   P   
Sbjct: 64  GHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLSMELGIPSKQ 123

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           P  +    FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL A+DLH  EW+
Sbjct: 124 PSNY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWK 179

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHIFRGQP+RHLL +GWS+FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSS
Sbjct: 180 FRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSS 239

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRF 321
           V+SS SMH+G+LA A HA +T + FTV+Y PR SPSEF++P  +Y++++ +   S+GMRF
Sbjct: 240 VLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRF 299

Query: 322 KMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP 381
           +M FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP
Sbjct: 300 RMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 359

Query: 382 ALAPPALNSLPMPRPKRP 399
               P   SL   R KRP
Sbjct: 360 LTTFPMYPSLFPLRLKRP 377


>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 843

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/377 (52%), Positives = 265/377 (70%), Gaps = 12/377 (3%)

Query: 31  TTSGVKRVG--DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           +TSG+ + G    +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D 
Sbjct: 4   STSGLGQQGHEGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDG 63

Query: 89  QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPP 143
            +P Y  LP +++C++ N+ + A+ +TDEV+AQ+TL P + Q++      +E   P   P
Sbjct: 64  HIPNYPSLPPQLICQLHNITMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQP 123

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
             +    FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+F
Sbjct: 124 SNY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKF 179

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
           RHIFRGQP+RHLL +GWS+FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSV 239

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFK 322
           +SS SMH+G+LA A HA +T + FTV+Y PR SPSEF++P  +Y++++ +   S+GMRF+
Sbjct: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFR 299

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           M FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP 
Sbjct: 300 MLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359

Query: 383 LAPPALNSLPMPRPKRP 399
              P   SL   R KRP
Sbjct: 360 TTFPMYPSLFPLRLKRP 376


>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 709

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/411 (48%), Positives = 262/411 (63%), Gaps = 37/411 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV-YDLPSKILCRVINV 106
           ELWHACAGPL+++P++G  V YFPQGH+EQ       + D  +P   ++PS + CRV++V
Sbjct: 28  ELWHACAGPLISLPKKGSVVVYFPQGHLEQ------HLHDFPLPASANIPSHVFCRVLDV 81

Query: 107 QLKAEPDTDEVFAQVTLLPESNQ-----------------DENAVEKEPPPPPPPRFHVH 149
           +L AE  +DEV  QV L+PE+ Q                 D  AV K   P        H
Sbjct: 82  KLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVMKSTTP--------H 133

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EWRFRHI+RG
Sbjct: 134 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRG 193

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QPRRHLL +GWS FV+ K+LV+GDA +FLRGE+GELR+G+RRA + +     S +S   +
Sbjct: 194 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQL 253

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
               L    +A+S    F+++Y PR S SEFI+P  ++++S+  +YS GMRF+MRFE E+
Sbjct: 254 SPTSLMDVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYSYSAGMRFRMRFETED 313

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           A E+RFTG IVGI D DP RW  SKWRCL VRWD+   + R  RVS W+IEP+ +    N
Sbjct: 314 AAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDDLE-VTRHNRVSPWEIEPSGSASTAN 372

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           +L     KR +  +  +  +  V    G+S    D   +  F +VLQGQE 
Sbjct: 373 NLMSAGLKRTKIGLPSAKLEFPVSNAIGTS----DFGESLRFQKVLQGQEM 419


>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
          Length = 881

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/373 (53%), Positives = 267/373 (71%), Gaps = 20/373 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 14  CLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 73

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP--------PPPRFHVHSFCKT 154
           + NV + A+ +T EV+AQ+TL P S +++    KEP  P         P  +    FCKT
Sbjct: 74  LHNVTMHADAETGEVYAQMTLQPLSPEEQ----KEPFLPIELGAGSNQPTNY----FCKT 125

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S+ PP QEL A+DLH NEW+FRHIFRGQP+RH
Sbjct: 126 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRH 185

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+L
Sbjct: 186 LLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLL 245

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQ 333
           A A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +
Sbjct: 246 AAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVR 305

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLP 392
           R+ GTI  I D D +RW +S WR +KV WDE++   +  RVSLW+IEP +A P    + P
Sbjct: 306 RYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFP 365

Query: 393 MPRPKRPRSNMLP 405
           + R KRP ++ LP
Sbjct: 366 L-RLKRPWASGLP 377


>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 904

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/375 (53%), Positives = 262/375 (69%), Gaps = 10/375 (2%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G KRV D      +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  D  +P Y
Sbjct: 15  GEKRVLD------SELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNY 68

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFC 152
             LP +++C++ N+ + A+ +TDEV+AQ+TL P + Q++           P +   + FC
Sbjct: 69  PSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPSKQPTNYFC 128

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           K LTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLHGNEW+FRHIFRGQP+
Sbjct: 129 KILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPK 188

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG
Sbjct: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLG 248

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAP 331
           +LA A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+ 
Sbjct: 249 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS 308

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
            +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP    P   S 
Sbjct: 309 VRRYMGTITGISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS- 367

Query: 392 PMP-RPKRPRSNMLP 405
           P P R KRP    LP
Sbjct: 368 PFPLRLKRPWPPGLP 382


>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
 gi|219886495|gb|ACL53622.1| unknown [Zea mays]
 gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 888

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/373 (53%), Positives = 267/373 (71%), Gaps = 20/373 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 21  CLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP--------PPPRFHVHSFCKT 154
           + NV + A+ +T EV+AQ+TL P S +++    KEP  P         P  +    FCKT
Sbjct: 81  LHNVTMHADAETGEVYAQMTLQPLSPEEQ----KEPFLPIELGAGSNQPTNY----FCKT 132

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S+ PP QEL A+DLH NEW+FRHIFRGQP+RH
Sbjct: 133 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRH 192

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+L
Sbjct: 193 LLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLL 252

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQ 333
           A A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +
Sbjct: 253 AAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVR 312

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLP 392
           R+ GTI  I D D +RW +S WR +KV WDE++   +  RVSLW+IEP +A P    + P
Sbjct: 313 RYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFP 372

Query: 393 MPRPKRPRSNMLP 405
           + R KRP ++ LP
Sbjct: 373 L-RLKRPWASGLP 384


>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
          Length = 712

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/409 (49%), Positives = 266/409 (65%), Gaps = 20/409 (4%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P++G  V Y PQGH+EQV       +D     YDLP  + CRV++V+
Sbjct: 41  ELWHACAGPLISLPKKGTVVVYLPQGHLEQV-------SDFPTSAYDLPPHLFCRVVDVK 93

Query: 108 LKAEPDTDEVFAQVTLLPESNQDEN-AVEKEPPPPPPPRFHV-------HSFCKTLTASD 159
           L AE  TD+VFAQV+L+PES + E+  +E E                  H FCKTLTASD
Sbjct: 94  LHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTPHMFCKTLTASD 153

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSV RR A++C PPLD ++Q P+QEL AKDLHG EWRFRHI+RGQPRRHLL +G
Sbjct: 154 TSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTG 213

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WS FV+ K+LV+GDA +FLRG++GELR+G+RRA + + +     + S  ++   +    +
Sbjct: 214 WSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLNYSTVTDVVN 273

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AVST   F VYY PR S SEFI+P  +++ S+ + +S GMRFKMRFE E+A E+R+TG I
Sbjct: 274 AVSTKNAFNVYYNPRASSSEFIIPSRKFLRSLDHCFSAGMRFKMRFETEDAAERRYTGLI 333

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
            GI   DP RW  SKW+CL VRWD+  T  +  RVS W+IEP+ +  + +SL     KR 
Sbjct: 334 TGIGALDPIRWPGSKWKCLVVRWDDIDT-SKHGRVSPWEIEPSGSVSSSHSLMGTGLKRS 392

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFA 448
           R  +  + P+  V    G+S    D   +  F +VLQGQE S     F+
Sbjct: 393 RIGLSATKPEFPVPNGNGAS----DFGESLRFQKVLQGQEISGFDTPFS 437


>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
          Length = 934

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/370 (54%), Positives = 266/370 (71%), Gaps = 12/370 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 62  CLNSELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLPPQLICQ 121

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP----PPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P S +++    KEP  P       +   + FCKTLTAS
Sbjct: 122 LHNVTMHADVETDEVYAQMTLQPLSPEEQ----KEPFLPIELGAASKQPTNYFCKTLTAS 177

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +
Sbjct: 178 DTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLLTT 237

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ IF+  +N +L +G+R A R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 238 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAAAA 297

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR+SPSEF++P  +Y++S+ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 298 HAAATNSRFTIFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMG 357

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLPMPRP 396
           T+  I D D  RW +S WR +KV WDE++   +  RVSLW+IEP    P    + P+ R 
Sbjct: 358 TVTAISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPTAFPL-RL 416

Query: 397 KRPRSNMLPS 406
           KRP ++ LPS
Sbjct: 417 KRPWASGLPS 426


>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
          Length = 808

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/406 (48%), Positives = 268/406 (66%), Gaps = 15/406 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST-NQVADQQMPVYDLPSKILCRV 103
           +Y ELW+ACAGPL  +P++G  V YFPQGH+E+  +S+        +P + L  +I CRV
Sbjct: 58  IYMELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDLPTFGLHPQIFCRV 117

Query: 104 INVQLKAEPDTDEVFAQVTLLP---------ESNQDEN-AVEKEPPPPPPPRFHVHSFCK 153
            +VQL A  + DEV+ Q++LLP         E  + E+  +++E     P +   H FCK
Sbjct: 118 DDVQLLANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCK 177

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSV RR A++C PPLD   Q P+QEL AKDLHG EW+FRHI+RGQPRR
Sbjct: 178 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 237

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS+FVS K LV+GDA +FLRGE G+LR+G+RRA R +  +P S+I S      V
Sbjct: 238 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQYSGSDV 297

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           L+    AVST + F V+Y PR S ++F+VPY +Y++SIK    +G RFKMRF+ +++PE+
Sbjct: 298 LSAVASAVSTKSAFNVFYSPRASHADFVVPYQKYVKSIKTRIPVGTRFKMRFDLDDSPER 357

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R++G + GI D DP RW +SKWRCL VRWDE       ERVS W+I+ +++ P L+    
Sbjct: 358 RYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSVSLPPLSIQSS 417

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           PR K+ R++      DS      GS+ L+ + +  +  S+V QGQE
Sbjct: 418 PRLKKLRTSQQAQPVDSHFAG--GSALLDFEETIRS--SKVSQGQE 459


>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
 gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
          Length = 372

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/376 (53%), Positives = 264/376 (70%), Gaps = 23/376 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G R  YFPQGH EQV ASTN+  D  +P Y  LP++++C+
Sbjct: 4   CLNSELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQLICQ 63

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDEN----------AVEKEPPPPPPPRFHVHSFC 152
           + NV + A+ +TDEV+AQ+TL P S +D+              K+P          + FC
Sbjct: 64  LHNVTMHADVETDEVYAQMTLQPLSPEDKKDAYLLPAELGTASKQPS---------NYFC 114

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++  PPLD S+ PP QEL A+DLH NEW+FRHIFRGQP+
Sbjct: 115 KTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPK 174

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G
Sbjct: 175 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIG 234

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAP 331
           +LA A HA +T + FT++Y PRTSPSEF++P  +Y++++ +   S+GMRF+M FE EE+ 
Sbjct: 235 LLAAAAHAAATNSRFTIFYNPRTSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESS 294

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NS 390
            +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   ++
Sbjct: 295 VRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSA 354

Query: 391 LPMPRPKRPRSNMLPS 406
            PM R KRP  + LPS
Sbjct: 355 FPM-RLKRPWPSGLPS 369


>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
 gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
          Length = 844

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/370 (53%), Positives = 257/370 (69%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV A+TN+  D  +P Y +LP +++C 
Sbjct: 19  CLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKELDIHIPNYPNLPPQLICP 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P + Q++           P R   + FCKTLTASDTST
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S+ PP QEL A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA S
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + F V++ PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           I D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL   R KRP  
Sbjct: 319 IGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPFY 378

Query: 402 NMLPSSPDSS 411
               S  DS+
Sbjct: 379 QGTSSYQDSN 388


>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
 gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
          Length = 524

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/392 (53%), Positives = 268/392 (68%), Gaps = 9/392 (2%)

Query: 20  RIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVE 79
           R+   G N     +G K+       L +ELWHACAGPLV++P  G RV YFPQGH  QV 
Sbjct: 2   RVSSSGFNPQPEEAGEKK------CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVA 55

Query: 80  ASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP 138
           ASTN+  D  +P Y  LP +++C++ N+ + A+ +TDEV+AQ+TL P S Q++  V   P
Sbjct: 56  ASTNKEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLP 115

Query: 139 PP-PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLH 197
                P +   + FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL AKDLH
Sbjct: 116 AELGIPSKLPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLH 175

Query: 198 GNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 257
           GNEW+ RHIFRGQP+RHLL +GWSVFVS+KRLVAGDA IF+  EN +L +G+RRA R Q 
Sbjct: 176 GNEWKLRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQT 235

Query: 258 NVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YS 316
            +P SV+SS SMH+G+LA A HA +T T FT++Y PR SPSEF++P  +Y +++ +   S
Sbjct: 236 LMPFSVLSSDSMHIGLLAAAAHATATNTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRIS 295

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +GMRF+M FE EE+  +R+ GTI GI D DP  W +S WR +KV WDE++   R  RVSL
Sbjct: 296 VGMRFRMLFETEESSVRRYMGTITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSL 355

Query: 377 WKIEPALAPPALNSLPMPRPKRPRSNMLPSSP 408
           W+IEP    P   S    R KRP  + LPS P
Sbjct: 356 WEIEPLTTFPMYPSPFSLRLKRPWPSGLPSLP 387


>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
          Length = 914

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/375 (54%), Positives = 265/375 (70%), Gaps = 22/375 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y  LP +++C+
Sbjct: 26  CLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQ 85

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P S Q+     K+P  P           + FCKTLTAS
Sbjct: 86  LHNVTMHADAETDEVYAQMTLQPLSPQEL----KDPFLPAELGTASNQPTNYFCKTLTAS 141

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGN+W+FRHIFRGQP+RHLL +
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTT 201

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA ST + FT++Y PR SP EF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 262 HAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRP 396
           TI GI D DP RW +S WR +KV WDE++   +  RVSLW+IEP      L + PM P P
Sbjct: 322 TITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP------LTTFPMYPSP 375

Query: 397 -----KRPRSNMLPS 406
                KRP    LPS
Sbjct: 376 FALGLKRPWPAGLPS 390


>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 714

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/411 (48%), Positives = 261/411 (63%), Gaps = 37/411 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV-YDLPSKILCRVINV 106
           ELWHACAGP++++P++G  V YFPQGH+EQ       + D  +P   ++PS + CRV++V
Sbjct: 33  ELWHACAGPMISLPKKGSVVVYFPQGHLEQ------HLHDFPLPASANIPSHVFCRVLDV 86

Query: 107 QLKAEPDTDEVFAQVTLLPESNQ-----------------DENAVEKEPPPPPPPRFHVH 149
           +L AE  +DEV+ QV L+PES Q                 D  AV K   P        H
Sbjct: 87  KLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDAEAVMKSTTP--------H 138

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EWRFRHI+RG
Sbjct: 139 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRG 198

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QPRRHLL +GWS FV+ K+LV+GDA +FLRGE+GELR+G+RRA + +     S +S    
Sbjct: 199 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQG 258

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
               L    +A+S    F+++Y PR S SEFI+P  ++++S+  +YS GMRF+MRFE E+
Sbjct: 259 SPTSLMDVVNALSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYSYSAGMRFRMRFETED 318

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           A E+RFTG IVGI D DP RW  S+WRCL VRWD+     R  RVS W+IEP+ +    N
Sbjct: 319 AAERRFTGLIVGIADVDPVRWPGSRWRCLMVRWDDLEAT-RHNRVSPWEIEPSGSASTAN 377

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           +L     KR +  +  +  D  V    G+S    D   +  F +VLQGQE 
Sbjct: 378 NLMSAGLKRTKIGLPSAKLDFPVSNAIGTS----DFGESLRFQKVLQGQEM 424


>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
          Length = 905

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/375 (54%), Positives = 265/375 (70%), Gaps = 22/375 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  + Q+P Y  LP +++C+
Sbjct: 17  CLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQ 76

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P S Q+     K+P  P           + FCKTLTAS
Sbjct: 77  LHNVTMHADAETDEVYAQMTLQPLSPQEL----KDPFLPAELGTASNQPTNYFCKTLTAS 132

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLHGN+W+FRHIFRGQP+RHLL +
Sbjct: 133 DTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTT 192

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 193 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 252

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA ST + FT++Y PR SP EF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 253 HAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 312

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRP 396
           TI GI D DP RW +S WR +KV WDE++   +  RVSLW+IEP      L + PM P P
Sbjct: 313 TITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP------LTTFPMYPSP 366

Query: 397 -----KRPRSNMLPS 406
                KRP    LPS
Sbjct: 367 FALGLKRPWPAGLPS 381


>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
          Length = 844

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/376 (53%), Positives = 262/376 (69%), Gaps = 10/376 (2%)

Query: 30  STTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           ST+  V++  + E  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  
Sbjct: 4   STSGLVQQSHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 90  MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPP 144
           +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + +++      +E   P   P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPS 123

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
            +    FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL A+DLH  EW+FR
Sbjct: 124 NY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFR 179

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E  +L +G+RRA R Q  VPSSV+
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVL 239

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKM 323
           SS SMH+G+LA A HA +T + FTV++ PR S SEF++   +Y++++     S+GMRF+M
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
            FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP  
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 384 APPALNSLPMPRPKRP 399
             P   SL   R KRP
Sbjct: 360 TFPMYPSLFPLRLKRP 375


>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
          Length = 620

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/401 (48%), Positives = 267/401 (66%), Gaps = 26/401 (6%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE VYYFPQG+IE V+AST +  ++  P+ DLPSK+ CRVI
Sbjct: 36  MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVI 95

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH--VHSFCKTLTASDTST 162
            + LK E ++DE++A++TL+P++ Q         P     RF   V+SF K LTASDTS 
Sbjct: 96  AIHLKVENNSDEIYAEITLMPDTTQ------VVIPTQSENRFRPLVNSFTKVLTASDTSA 149

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           +GGFSV ++HA ECLPPLDMS+  P QE+ A DLH N+WRFRH +RG P+RH L +GW+ 
Sbjct: 150 YGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNE 209

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           F++SK+LV GD  +F+RGE GELRVG+RRA  QQGN+PSS++S   M  GV+A+A HA  
Sbjct: 210 FITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFD 269

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
              +F V YKP    S+FIV YD++++++ N +++G RF MRFEG++  E+R+ GTI+G+
Sbjct: 270 NQCIFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGV 329

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D  P  W+ S+WR L+V+WDE ++  RP +VS W+IE  +  PALN         PRS+
Sbjct: 330 SDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV--PALNV--------PRSS 378

Query: 403 MLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTL 443
           +L +     V    GSS  ++ P   T      QGQE   L
Sbjct: 379 LLKNKRLREV-NEFGSSSSHLLPPILT------QGQEIGQL 412


>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
          Length = 914

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/366 (54%), Positives = 260/366 (71%), Gaps = 4/366 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  LP +++C+
Sbjct: 19  CLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P + Q++             +   + FCKTLTASDTST
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLNPQEQKDAFLPADLGTSGKQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD ++QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRPR 400
           I D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   S P P R KRP 
Sbjct: 319 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-PFPLRLKRPW 377

Query: 401 SNMLPS 406
              LPS
Sbjct: 378 PPGLPS 383


>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
          Length = 662

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/322 (56%), Positives = 242/322 (75%), Gaps = 7/322 (2%)

Query: 88  QQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH 147
           +Q+ ++ +P KILC+V+NV+LKAE +TDEVFAQ+TL P+ +Q+      +PP P  PR  
Sbjct: 22  EQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPV 81

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
           VHSFCK LT SDTSTHGGFSVLRRHA+ECLPPLDMS   PTQEL  KDLHG+EWRF+HI+
Sbjct: 82  VHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIY 141

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RGQPRRHLL +GWS FV+SK+L++GDAF++LR E GE RVGVRR +++Q  +P+SVISS 
Sbjct: 142 RGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQ 201

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEG 327
           SMHLGVLA+A HA+ T ++F VYY+PR S S++IV  ++Y+ + K  +++GMRFKM FEG
Sbjct: 202 SMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEG 261

Query: 328 EEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE------P 381
           E+ P ++F+GTIVG  D   Q W  S+W+ LKV+WDE + +  PERVS W+IE      P
Sbjct: 262 EDVPVKKFSGTIVGEGDLSLQ-WSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAP 320

Query: 382 ALAPPALNSLPMPRPKRPRSNM 403
           A+  P  ++    RP+ P   +
Sbjct: 321 AINVPLQSATKNKRPREPSETI 342


>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
 gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
 gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
 gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
 gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
          Length = 593

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 181/345 (52%), Positives = 246/345 (71%), Gaps = 9/345 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE VE ST +  ++  P+ DLPSK+ CRVI
Sbjct: 24  VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVI 83

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            + LK E ++DE +A++TL+P++ Q     + E    P     V+SF K LTASDTS HG
Sbjct: 84  AIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP----LVNSFTKVLTASDTSAHG 139

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GF V ++HA ECLP LDMS+  P QEL A DLHGN+WRF H +RG P+RHLL +GW+ F 
Sbjct: 140 GFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 199

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SK+LVAGD  +F+RGE GELRVG+RRA  QQGN+PSS++S   M  GV+A+A HA    
Sbjct: 200 TSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQ 259

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
            MFTV YKPR+  S+FIV YD++++++ N +++G RF MR EG++  E+R  GTI+G+ D
Sbjct: 260 CMFTVVYKPRS--SKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSD 317

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
             P  W+ S+WR L+V+WDE ++ P P++VS W IE  +  PA+N
Sbjct: 318 FSPH-WKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLM--PAIN 359


>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 773

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/386 (52%), Positives = 265/386 (68%), Gaps = 11/386 (2%)

Query: 31  TTSGVKRVG-DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           +TSG+ + G + E  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  
Sbjct: 4   STSGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 90  MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPP 144
           +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + +++      +E   P   P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPS 123

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
            +    FCKTLTASDTSTHGGFSV RR A++  PPLD + QPP QEL A+DLH  EW+FR
Sbjct: 124 NY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E  +L +G+R A R Q  VPSSV+
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKM 323
           SS SMH+G+LA A HA +T + FTV++ PR S SEF++   +Y++++     S+GMRF+M
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
            FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP  
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 384 APPALNSLPMPRPKRPRSNMLPSSPD 409
             P   SL   R KRP      S PD
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLPD 385


>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
          Length = 1107

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/372 (55%), Positives = 260/372 (69%), Gaps = 11/372 (2%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y  L SK+LC + NV
Sbjct: 30  ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKLLCLLHNV 89

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVHSFCKTLTASDTST 162
            L A+P+TDEV+AQ+TLLP  + D++A+ +         P P F    FCKTLTASDTST
Sbjct: 90  TLHADPETDEVYAQMTLLPVLSFDKDALLRSDLALKSNKPQPEF----FCKTLTASDTST 145

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL AKDLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 146 HGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSL 205

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL+AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 206 FVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 265

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FTV+Y PR SPSEF++P  +Y +++  N  S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 266 NNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITG 325

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           I D DP RW+ S+WR L+V WDE++   R  RVS+W+IEP +AP  +   P  R KRPR 
Sbjct: 326 ISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPFLRSKRPRQ 385

Query: 402 NMLPSSPDSSVL 413
             +P   DSS L
Sbjct: 386 PGMPDD-DSSDL 396


>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
           WITHOUT FERTILIZATION
 gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
 gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 811

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/386 (52%), Positives = 265/386 (68%), Gaps = 11/386 (2%)

Query: 31  TTSGVKRVG-DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           +TSG+ + G + E  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  
Sbjct: 4   STSGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 90  MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPP 144
           +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + +++      +E   P   P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPS 123

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
            +    FCKTLTASDTSTHGGFSV RR A++  PPLD + QPP QEL A+DLH  EW+FR
Sbjct: 124 NY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E  +L +G+R A R Q  VPSSV+
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKM 323
           SS SMH+G+LA A HA +T + FTV++ PR S SEF++   +Y++++     S+GMRF+M
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
            FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP  
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 384 APPALNSLPMPRPKRPRSNMLPSSPD 409
             P   SL   R KRP      S PD
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLPD 385


>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
          Length = 821

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/386 (52%), Positives = 265/386 (68%), Gaps = 11/386 (2%)

Query: 31  TTSGVKRVG-DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           +TSG+ + G + E  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  
Sbjct: 4   STSGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 90  MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPP 144
           +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + +++      +E   P   P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPS 123

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
            +    FCKTLTASDTSTHGGFSV RR A++  PPLD + QPP QEL A+DLH  EW+FR
Sbjct: 124 NY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E  +L +G+R A R Q  VPSSV+
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKM 323
           SS SMH+G+LA A HA +T + FTV++ PR S SEF++   +Y++++     S+GMRF+M
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
            FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP  
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 384 APPALNSLPMPRPKRPRSNMLPSSPD 409
             P   SL   R KRP      S PD
Sbjct: 360 TFPMYPSLFPLRLKRPWHAGTSSLPD 385


>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
          Length = 1107

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/372 (55%), Positives = 260/372 (69%), Gaps = 11/372 (2%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y  L SK+LC + NV
Sbjct: 30  ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKLLCLLHNV 89

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVHSFCKTLTASDTST 162
            L A+P+TDEV+AQ+TLLP  + D++A+ +         P P F    FCKTLTASDTST
Sbjct: 90  TLHADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEF----FCKTLTASDTST 145

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL AKDLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 146 HGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSL 205

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL+AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 206 FVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 265

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FTV+Y PR SPSEF++P  +Y +++  N  S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 266 NNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITG 325

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           I D DP RW+ S+WR L+V WDE++   R  RVS+W+IEP +AP  +   P  R KRPR 
Sbjct: 326 ISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPFLRSKRPRQ 385

Query: 402 NMLPSSPDSSVL 413
             +P   DSS L
Sbjct: 386 PGMPDD-DSSDL 396


>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
 gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
 gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
          Length = 606

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/419 (47%), Positives = 277/419 (66%), Gaps = 30/419 (7%)

Query: 27  NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVA 86
           N+    SG+  +   +  +Y +LW  CAGPL  +P+ GE VYYFPQG+IE V+AST +  
Sbjct: 8   NAQPKLSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREEL 65

Query: 87  DQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF 146
           ++  P+ DLPSK+ CRVI + LK E ++DE++A++TL+P++ Q     + E       RF
Sbjct: 66  NELQPICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSEN------RF 119

Query: 147 H--VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
              V+SF K LTASDTS +GGFSV ++HA ECLPPLDMS+  P QE+ A DLH N+WRFR
Sbjct: 120 RPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFR 179

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           H +RG P+RH L +GW+ F++SK+LV GD  +F+RGE GELRVG+RRA  QQGN+PSS++
Sbjct: 180 HNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV 239

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
           S   M  GV+A+A HA     +F V YKPR+  S+FIV YD++++++ N +++G RF MR
Sbjct: 240 SIDCMRHGVIASAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMR 297

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FEG++  E+R+ GTI+G+ D  P  W+ S+WR L+V+WDE ++  RP +VS W+IE  + 
Sbjct: 298 FEGDDFSERRYFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV- 355

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTL 443
            PALN         PRS++L +     V    GSS  ++ P   T      QGQE   L
Sbjct: 356 -PALNV--------PRSSLLKNKRLREV-NEFGSSSSHLLPPILT------QGQEIGQL 398


>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
          Length = 615

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/388 (48%), Positives = 265/388 (68%), Gaps = 23/388 (5%)

Query: 17  ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIE 76
           ETG +     N+    SG+  +   +  +Y +LW  CAGPL  +P+ GE VYYFPQG+IE
Sbjct: 2   ETGNVV----NAQPELSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIE 55

Query: 77  QVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK 136
            V+AST +  ++  P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q     + 
Sbjct: 56  LVDASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQS 115

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           E    P     V+SF K LTASDTS +GGF V ++HA ECLPPLDMS+  P QEL AKDL
Sbjct: 116 ENQFRP----LVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLDMSQPLPAQELLAKDL 171

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HGN+WRFRH +RG P+RH L +GW+ F +SK+LV GD  +F+RGE GELRVG+RRA  QQ
Sbjct: 172 HGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQ 231

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
           GN+PSS++S   M  GV+A+A HA+    +F V YKPR+S  +FIV YD++++++ N + 
Sbjct: 232 GNIPSSIVSIDCMRHGVIASAKHALDNQCIFIVVYKPRSS--QFIVSYDKFLDAMNNKFI 289

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +G RF MRFEG++  E+R+ GTI+G+ D  P  W+ S+WR L+V+WDE ++  RP +VS 
Sbjct: 290 VGSRFTMRFEGDDFSERRYFGTIIGVNDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSP 348

Query: 377 WKIEPALAPPALNSLPMPRPKRPRSNML 404
           W+IE  ++  ALN         PRS++L
Sbjct: 349 WEIEHLMS--ALNV--------PRSSLL 366


>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
 gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
          Length = 811

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/407 (48%), Positives = 267/407 (65%), Gaps = 16/407 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQ-VEASTNQVADQQMPVYDLPSKILCRV 103
           +Y ELWHACAGPL ++P++G  V YFPQGH+E+ V A         +P + L  +I CRV
Sbjct: 59  IYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTFGLQPQIFCRV 118

Query: 104 INVQLKAEPDTDEVFAQVTLLP----------ESNQDENAVEKEPPPPPPPRFHVHSFCK 153
            +VQL A  + DEV+ Q+TLLP              +++  ++E     P +   H FCK
Sbjct: 119 EDVQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCK 178

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDT+THGGFSV RR A++C PPLD   Q P+QEL AKDLHG EW+FRHI+RGQPRR
Sbjct: 179 TLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 238

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS+FVS K LV+GDA +FLRGE G LR+G+RRA R +  +P S+I S      V
Sbjct: 239 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGPDV 298

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           L++   A+S  + F V+Y PR S ++F+VPY +Y+++I +   +G RFKM+F+ +++PE+
Sbjct: 299 LSSVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAINSRIPVGTRFKMKFDLDDSPER 358

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R++G + GI D DP RW +SKWRCL VRWDE       ERVS W+I+ +++ P L+    
Sbjct: 359 RYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVSLPPLSIQSS 418

Query: 394 PRPKRPR-SNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           PR K+ R S   PS  DS      GS+ L+ + S  +  S+VLQGQE
Sbjct: 419 PRLKKLRTSQQAPSVLDSHFAG--GSALLDFEESIRS--SKVLQGQE 461


>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
          Length = 819

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/370 (52%), Positives = 259/370 (70%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 26  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 85

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 86  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 145

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 325

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 326 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 385

Query: 402 NMLPSSPDSS 411
           + + S  D S
Sbjct: 386 SGVASLHDDS 395


>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
 gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
          Length = 816

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/370 (52%), Positives = 259/370 (70%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 27  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 87  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 146

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 147 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 206

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 207 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 266

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 267 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 326

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 327 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 386

Query: 402 NMLPSSPDSS 411
           + + S  D S
Sbjct: 387 SGVASLHDDS 396


>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
 gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
 gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
 gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
          Length = 818

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/370 (52%), Positives = 259/370 (70%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 27  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 87  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 146

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 147 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 206

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 207 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 266

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 267 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 326

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 327 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 386

Query: 402 NMLPSSPDSS 411
           + + S  D S
Sbjct: 387 SGVASLHDDS 396


>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
 gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
           AltName: Full=OsMP; AltName: Full=Protein
           MONOPTEROS-like
 gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
           AltName: Full=OsMP; AltName: Full=Protein
           MONOPTEROS-like
 gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
 gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
          Length = 955

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/358 (54%), Positives = 249/358 (69%), Gaps = 23/358 (6%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 29  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIP 82

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y +LPS++LC+V N+ L A+ DTDEV+AQ+TL P        V  E    P P    ++
Sbjct: 83  NYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQP--------VNSETDVFPIPTLGAYT 134

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 135 KSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 194

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L +GVRRA RQQ  + SS
Sbjct: 195 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSS 254

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           V+S+ SMH+GVLA A HA S+G+ FT+YY PRTSPS F++P  +Y ++     S+GMRF 
Sbjct: 255 VLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFA 314

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           M FE EE+ ++R+TGT+VGI D DP RW +SKWR L+V WDE     RPERVS+W IE
Sbjct: 315 MMFETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372


>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 805

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/376 (52%), Positives = 262/376 (69%), Gaps = 11/376 (2%)

Query: 31  TTSGVKRVG-DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           +TSG+ + G + E  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  
Sbjct: 4   STSGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 90  MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPP 144
           +P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P + +++      +E   P   P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPS 123

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
            +    FCKTLTASDTSTHGGFSV RR A++  PPLD + QPP QEL A+DLH  EW+FR
Sbjct: 124 NY----FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFR 179

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E  +L +G+R A R Q  VPSSV+
Sbjct: 180 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVL 239

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKM 323
           SS SMH+G+LA A HA +T + FTV++ PR S SEF++   +Y++++     S+GMRF+M
Sbjct: 240 SSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRM 299

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
            FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R  RVSLW+IEP  
Sbjct: 300 LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 359

Query: 384 APPALNSLPMPRPKRP 399
             P   SL   R KRP
Sbjct: 360 TFPMYPSLFPLRLKRP 375


>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
          Length = 818

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/370 (52%), Positives = 259/370 (70%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 26  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 85

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 86  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 145

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 325

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 326 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 385

Query: 402 NMLPSSPDSS 411
           + + S  D S
Sbjct: 386 SGVASLHDDS 395


>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
          Length = 821

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/370 (52%), Positives = 259/370 (70%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 26  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 85

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 86  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 145

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 205

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 325

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 326 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 385

Query: 402 NMLPSSPDSS 411
           + + S  D S
Sbjct: 386 SGVASLHDDS 395


>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
 gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
          Length = 598

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/429 (46%), Positives = 279/429 (65%), Gaps = 29/429 (6%)

Query: 17  ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIE 76
           ETG +     N+    SG+  +   +  +Y +LW  CAGPL  +P+ GE+VYYFPQG+IE
Sbjct: 2   ETGNVV----NAQPELSGI--IDRSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIE 55

Query: 77  QVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK 136
            VEAST +  ++  P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++   EN ++ 
Sbjct: 56  LVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTVSEN-LQV 114

Query: 137 EPPPPPPPRFH--VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAK 194
             P     +F   V+SF K LTASD S +G FSV ++HA ECLPPLDMS+  P QEL A 
Sbjct: 115 VIPTQNENQFRPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAI 174

Query: 195 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
           DLHGN+W FRH +RG P+RHLL +GW+ F +SK+LV GD  +F+RGE GELRVG+RRA  
Sbjct: 175 DLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARH 234

Query: 255 QQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN 314
           QQGN+PSS++S   M  GV+A+A HA     MF V YKPR+  S+FIV YD++++++ N 
Sbjct: 235 QQGNIPSSIVSIDCMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNK 292

Query: 315 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERV 374
           +++G RF MRFEG++  E+R+ GTI+G+ +  P  W+ S WR L+V+WDE ++  RP +V
Sbjct: 293 FNVGSRFTMRFEGDDLSERRYFGTIIGVSNFSPH-WKCSDWRSLEVQWDEFASFLRPNKV 351

Query: 375 SLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRV 434
           S W+IE  +  PALN         PRS+ L +     V    GSS  ++ P   T     
Sbjct: 352 SPWEIEHLM--PALNV--------PRSSFLKNKRLREV-NEFGSSSSHLLPPILT----- 395

Query: 435 LQGQEFSTL 443
            QGQE   L
Sbjct: 396 -QGQEIGQL 403


>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
          Length = 870

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/358 (53%), Positives = 257/358 (71%), Gaps = 5/358 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y  LP +++C 
Sbjct: 17  TLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRELDVQIPNYTSLPPQLICH 76

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P S Q++      P    P +   + FC TLTASDTST
Sbjct: 77  LHNVTMNADVETDEVYAQMTLQPLSLQEQKESYFVPDLGSPSKQPSNYFCXTLTASDTST 136

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFS+ RR A++  P LD ++QPP QEL A+DLH  EW+FRHI+RGQP+RHLL +GWSV
Sbjct: 137 HGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRGQPKRHLLTTGWSV 196

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+R ++G+L +G+RRA +    +PSSV+SS SMH+GVLA A HA +
Sbjct: 197 FVSAKRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSSVLSSDSMHIGVLAAAAHAAA 256

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + F ++Y PR SPSEF++P+ +Y +++ +   S+G+RF+M FE EE+  +R+ GTI G
Sbjct: 257 TNSPFNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETEESGVRRYMGTITG 316

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA---LAPPALNSLPMPRP 396
           I D DP RW +S+WR LKV WDE++   R  RVSLW+IEP    L  P   SL + RP
Sbjct: 317 IGDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEPLTTFLMYPPPYSLNLKRP 374


>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
 gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
          Length = 372

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/376 (53%), Positives = 261/376 (69%), Gaps = 23/376 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  LP +++C+
Sbjct: 4   CLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQ 63

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDEN----------AVEKEPPPPPPPRFHVHSFC 152
           + NV + A+ +TDEV+AQ+TL P S  D+              K+P          + FC
Sbjct: 64  LHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQP---------TNYFC 114

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++  P LD S+ PP QEL A+DLH NEW+FRHIFRGQP+
Sbjct: 115 KTLTASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPK 174

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G
Sbjct: 175 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIG 234

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAP 331
           +LA A HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+ 
Sbjct: 235 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESS 294

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NS 390
            +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   ++
Sbjct: 295 VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSA 354

Query: 391 LPMPRPKRPRSNMLPS 406
            PM R KRP  + LPS
Sbjct: 355 FPM-RLKRPWPSGLPS 369


>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
          Length = 843

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/358 (53%), Positives = 254/358 (70%), Gaps = 2/358 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +EL HACAGPLV +P  G RV YFPQGH EQV A+TN+  D  +P Y +LP +++C+
Sbjct: 19  CLNSELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P + Q++           P R   + FCKTLTASDTST
Sbjct: 79  LHNVTMHADVETDEVYAQMTLQPLTRQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S+ PP QEL A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  +  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 199 FVSAKRLVAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FTV++ PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           I D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL   R KRP
Sbjct: 319 IGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 376


>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
          Length = 818

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/370 (52%), Positives = 259/370 (70%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 26  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 85

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 86  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 145

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWS+
Sbjct: 146 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSI 205

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 206 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 265

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 325

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 326 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 385

Query: 402 NMLPSSPDSS 411
           + + S  D S
Sbjct: 386 SGVASLHDDS 395


>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
 gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
          Length = 1143

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/358 (54%), Positives = 255/358 (71%), Gaps = 2/358 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 32  INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHVPSYPNLPSKLICLL 91

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TLLP ++  + A++        PR     FCKTLTASDTSTH
Sbjct: 92  HNVTLHADPETDEVYAQMTLLPVTSYGKEALQLSELALKQPRPQTEFFCKTLTASDTSTH 151

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD S QPP QE+ A+DLH N W FRHI+RGQP+RHLL +GWS+F
Sbjct: 152 GGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLF 211

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 212 VSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAAN 271

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FT++Y PR SP+EF+VP+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI GI
Sbjct: 272 NSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGI 331

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
            D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 332 SDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGSKRPR 389


>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
          Length = 1084

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/343 (54%), Positives = 246/343 (71%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           ++ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  Q   + +P Y +LPSK++C 
Sbjct: 19  SINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKETECVPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+ +TDEV+AQ+TL P S  D+ A+          R  V  FCKTLTASDTST
Sbjct: 78  LHNVTLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSRQPVEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QE+ A+DLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVIS  SMH+G+LA A HA +
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            + D  RW++S+WR L+V WDE++   RP RVS+W+IEP + P
Sbjct: 318 SELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTP 360


>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1103

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/371 (53%), Positives = 255/371 (68%), Gaps = 18/371 (4%)

Query: 47  TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILC---- 101
           +ELWHACAGPLV++P  G RV YFPQGH EQV AST + A+  +P Y  LPS+++C    
Sbjct: 76  SELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRLVCLLDN 135

Query: 102 -----------RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
                       +I+V ++A+ +TDEV+AQ+TL+P    +E      P      R     
Sbjct: 136 VTLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPANEKEALMSPDIGIRSRQPTDY 195

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFS+ RR A++  PPLD S+ PP QEL A+DLH  EW FRHI+RGQ
Sbjct: 196 FCKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHFRHIYRGQ 255

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWSVFVS+KRL AGDA +F+R + G+L++G+RR  RQQ  +PSSV+SS SMH
Sbjct: 256 PRRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMH 315

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKN-NYSIGMRFKMRFEGEE 329
           +GVLA A HA +T + FT++Y PR SPSEF++P  +Y ++I N   S+GMRF+M FE EE
Sbjct: 316 IGVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICNLQVSVGMRFRMVFETEE 375

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           +  +R+ GTI G+ D DP RW +S WR LKV WDE++   R  RVSLW+IEP   P  L 
Sbjct: 376 SSVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLLC 435

Query: 390 SLPMP-RPKRP 399
             P+  R KRP
Sbjct: 436 PPPLTFRAKRP 446


>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
          Length = 795

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/370 (52%), Positives = 259/370 (70%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 4   CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 63

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 64  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 123

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 124 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSV 183

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 184 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 243

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 244 TNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 303

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 304 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 363

Query: 402 NMLPSSPDSS 411
           + + S  D S
Sbjct: 364 SGVASLHDDS 373


>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
          Length = 1123

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/359 (54%), Positives = 254/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 8   AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 67

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P ++  + A++         R     FCKTLTASDTST
Sbjct: 68  LHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTST 127

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 128 HGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 187

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 188 FVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 247

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 248 NNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITG 307

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 308 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPR 366


>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
 gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/384 (51%), Positives = 267/384 (69%), Gaps = 7/384 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y  LP +++C+
Sbjct: 7   CLNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQ 66

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV + A+ +TDEV+AQ+TL P + Q++           P +   + FCKTLTASDTST
Sbjct: 67  LHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLDLGMPSKQPTNYFCKTLTASDTST 126

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD ++QPP QEL A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 127 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 246

Query: 283 TGTMFTVYYKPR-TSPSEFIVPYDQYMESIKN-NYSIGMRFKMRFEGEEAPEQRFTGTIV 340
           T + FTV+Y PR  SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 247 TNSCFTVFYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRRYMGTIT 306

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP- 399
           G  D DP RW +S WR +KV WDE++   R  RVSLW+IEP  + P   SL   R KRP 
Sbjct: 307 GTSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTSFPMYPSLFPLRLKRPW 366

Query: 400 ---RSNMLPSSPDSSVLTREGSSK 420
               S++L  + +  +  R GS +
Sbjct: 367 HPGSSSLLDEASNGLIWLRGGSGE 390


>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
          Length = 1161

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/359 (54%), Positives = 254/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 46  AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 105

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P ++  + A++         R     FCKTLTASDTST
Sbjct: 106 LHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTST 165

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 166 HGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 225

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 226 FVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 285

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 286 NNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITG 345

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 346 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPR 404


>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
          Length = 1138

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/359 (54%), Positives = 254/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 23  AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 82

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P ++  + A++         R     FCKTLTASDTST
Sbjct: 83  LHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTST 142

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 143 HGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 202

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 203 FVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 262

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 263 NNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITG 322

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 323 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPR 381


>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
          Length = 1137

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/359 (54%), Positives = 254/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 23  AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 82

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P ++  + A++         R     FCKTLTASDTST
Sbjct: 83  LHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTST 142

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 143 HGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 202

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 203 FVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 262

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 263 NNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITG 322

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 323 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPR 381


>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
          Length = 570

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/431 (45%), Positives = 276/431 (64%), Gaps = 41/431 (9%)

Query: 17  ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIE 76
           ETG +     N+    SG+  +   +  +Y +LW  CAGPL  +P+ GE+VYYFPQG+IE
Sbjct: 2   ETGNVV----NAQPELSGI--IDRSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIE 55

Query: 77  QVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK 136
            VEAST +  ++  P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q     + 
Sbjct: 56  LVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTQVVIPTQN 115

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           E    P     V+SF K LTASD S +G FSV ++HA ECLPPLDMS+  P QEL A DL
Sbjct: 116 ENQFRP----LVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDL 171

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HGN+W FRH +RG P+RHLL +GW+ F +SK+LV GD  +F+RGE GELRVG+RRA  QQ
Sbjct: 172 HGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQ 231

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
           GN+PSS++S   M  GV+A+A HA     MF V YKPR+  S+FIV YD++++++ N ++
Sbjct: 232 GNIPSSIVSIDCMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFN 289

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +G RF MRFEG++  E+R+ GTI+G+ +  P  W+ S WR L+V+WDE ++  RP +VS 
Sbjct: 290 VGSRFTMRFEGDDLSERRYFGTIIGVSNFSPH-WKCSDWRSLEVQWDEFASFLRPNKVSP 348

Query: 377 WKIE---PALAPP------------------------ALNSLPM-PRPKRPRSNMLPSSP 408
           W+IE   PAL  P                         L S P+ P PKR  +N + +  
Sbjct: 349 WEIEHLMPALNVPRSSFLKNKRLREVNEFEDAMNPSRLLMSYPVQPMPKRNYNNQMVTQI 408

Query: 409 DSSVLTREGSS 419
           + ++ T+ G++
Sbjct: 409 EENITTKAGTN 419


>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
          Length = 831

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/357 (53%), Positives = 252/357 (70%), Gaps = 2/357 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP +++C++
Sbjct: 30  LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQL 89

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTSTH
Sbjct: 90  HDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTSTH 149

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSVF
Sbjct: 150 GGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVF 209

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA ST
Sbjct: 210 VSAKRLVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLAAAAHAAST 269

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FT++Y PR  PSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  +
Sbjct: 270 NSRFTIFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEV 329

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
            DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P
Sbjct: 330 SDADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHP 386


>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/363 (54%), Positives = 257/363 (70%), Gaps = 11/363 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y  LP +++C+
Sbjct: 20  CLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQ 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P + Q++      VE   P   P  +    FCKTLTAS
Sbjct: 80  LHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNY----FCKTLTAS 135

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG-QPRRHLLQ 217
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+FRHIFRG QP+RHLL 
Sbjct: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPKRHLLT 195

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA +T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+ 
Sbjct: 256 AHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL   R 
Sbjct: 316 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 375

Query: 397 KRP 399
           KRP
Sbjct: 376 KRP 378


>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
          Length = 593

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/427 (46%), Positives = 276/427 (64%), Gaps = 30/427 (7%)

Query: 17  ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIE 76
           ETG +     N+    SG+  +   +  +Y +LW  CAGPL  +P+ GE+VYYFPQG+IE
Sbjct: 2   ETGNVV----NAQPELSGI--IDRSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIE 55

Query: 77  QVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK 136
            VEAST +  ++  P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q     + 
Sbjct: 56  LVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTQVVIPTQN 115

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           E    P     V+SF K LTASD S +G FSV ++HA ECLPPLDMS+  P QEL A DL
Sbjct: 116 ENQFRP----LVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDL 171

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HGN+W FRH +RG P+RHLL +GW+ F +SK+LV GD  +F+RGE GELRVG+RRA  QQ
Sbjct: 172 HGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQ 231

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
           GN+PSS++S   M  GV+A+A HA     MF V YKPR+  S+FIV YD++++++ N ++
Sbjct: 232 GNIPSSIVSIDCMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVNNKFN 289

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +G RF MRFEG++  E+R+ GTI+G+ +  P  W+ S WR L+V+WDE ++  RP +VS 
Sbjct: 290 VGSRFTMRFEGDDLSERRYFGTIIGVSNFSPH-WKCSDWRSLEVQWDEFASFLRPNKVSP 348

Query: 377 WKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQ 436
           W+IE  +  PALN         PRS+ L +     V    GSS  ++ P   T      Q
Sbjct: 349 WEIEHLM--PALNV--------PRSSFLKNKRLREV-NEFGSSSSHLLPPILT------Q 391

Query: 437 GQEFSTL 443
           GQE   L
Sbjct: 392 GQEIGQL 398


>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/343 (54%), Positives = 246/343 (71%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           ++ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  Q   + +P Y +LPSK++C 
Sbjct: 19  SINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASM-QKETECVPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+ +TDEV+AQ+TL P S  D+ A+          R  V  FCKTLTASDTST
Sbjct: 78  LHNVTLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSRQPVEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QE+ A+DLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVIS  SMH+G+LA A HA +
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            + D  RW++S+WR L+V WDE++   RP RVS+W+IEP + P
Sbjct: 318 SELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTP 360


>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
 gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
          Length = 946

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/453 (47%), Positives = 280/453 (61%), Gaps = 31/453 (6%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 29  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIP 82

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y  LPS++LC+V N+ L A+ +TDE++AQ+TL P        V  E    P P    ++
Sbjct: 83  NYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQP--------VHSETDVFPIPSLGAYT 134

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 135 KSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 194

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L VGVRRA RQQ  + SS
Sbjct: 195 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSS 254

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           V+S+ SMH+GVLA A HA S+G  FT+YY PRTSPS F++P  +Y ++     S+GMRF 
Sbjct: 255 VLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFA 314

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP- 381
           M FE EE+ ++R TGTIVGI D DP RW +SKWR L+V WDE     RPERVSLW IE  
Sbjct: 315 MMFETEESIKRRCTGTIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETP 374

Query: 382 --ALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS---KLNVDPSSATGFSRVLQ 436
              + P  LNS     P      +   S + S + R   S    L   P S +  + +L 
Sbjct: 375 ENMVFPSPLNSKRQCLPSYAVPGLQIGSVNMSSIPRAQGSPFGNLQQMPGSGSDLALLLL 434

Query: 437 GQEFSTLRGNFAERESNESDTAE--KSVVWPPS 467
            Q    L    A ++S+ S   +  K   +PPS
Sbjct: 435 NQSGQNLGSPIACQQSSFSSIIQNAKHSYFPPS 467


>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
 gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
 gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
          Length = 930

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/343 (55%), Positives = 246/343 (71%), Gaps = 13/343 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPLVT+P+ G  VYYFPQGH EQV  STN+ A  Q+P Y +L S++LC+V
Sbjct: 41  ISSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLASQLLCQV 100

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP-----PPRFHVHSFCKTLTAS 158
            NV L A+ +TDE++AQ++L P ++      EK+  P P     P +     FCKTLTAS
Sbjct: 101 HNVTLHADKETDEIYAQMSLQPVNS------EKDVFPIPDFGLKPNKHPTEFFCKTLTAS 154

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S QPPTQEL  +DLH N W FRHI+RGQP+RHLL +
Sbjct: 155 DTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 214

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS+FV +KRL AGD+ +F+R E  +L +GVRRA RQQ ++PSSV+S+ SMH+GVLA A 
Sbjct: 215 GWSMFVGAKRLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAA 274

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +  + FT++Y PR  PSEF++P  ++ +S+ N   S+GMRF M FE EE+ ++R+ G
Sbjct: 275 HAAANRSTFTIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRRYMG 334

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           TI GI D DP RW  SKWRCL+V WDE     +  RVS W++E
Sbjct: 335 TISGISDLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVE 377


>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
 gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
 gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
 gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
          Length = 991

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/374 (52%), Positives = 260/374 (69%), Gaps = 2/374 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 46  AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 105

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P ++  + A++         R     FCKTLTASDTST
Sbjct: 106 LHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTST 165

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 166 HGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 225

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 226 FVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 285

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 286 NNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITG 345

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR 
Sbjct: 346 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPRQ 405

Query: 402 NMLPSSPDSSVLTR 415
               SS   ++L R
Sbjct: 406 LDDESSEMENLLKR 419


>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
          Length = 1142

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/359 (54%), Positives = 252/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 40  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 99

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           +  V L A+PDTDEV+AQ+TL P +   + A++         R  +  FCKTLTASDTST
Sbjct: 100 LHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTST 159

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+D+H N W FRHI+RGQP+RHLL +GWS+
Sbjct: 160 HGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSL 219

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ I +R E  +L +G+RRA RQ  N+ SSV+SS SMH+GVLA A HA +
Sbjct: 220 FVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAA 279

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 280 NSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITG 339

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  L   P    KRPR
Sbjct: 340 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFGVKRPR 398


>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 786

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/370 (52%), Positives = 257/370 (69%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 25  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQ 84

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 85  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 144

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 204

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+R A R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 205 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 264

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SP+EF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 265 TNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 324

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 325 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 384

Query: 402 NMLPSSPDSS 411
           + L +  D S
Sbjct: 385 SGLAALHDDS 394


>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 817

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/370 (52%), Positives = 257/370 (69%), Gaps = 2/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 25  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQ 84

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 85  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 144

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 204

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+R A R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 205 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 264

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SP+EF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 265 TNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 324

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 325 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 384

Query: 402 NMLPSSPDSS 411
           + L +  D S
Sbjct: 385 SGLAALHDDS 394


>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
          Length = 718

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/401 (48%), Positives = 260/401 (64%), Gaps = 22/401 (5%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P++G  V Y PQGH EQ +       D  +  Y++P+ + CRV++V+
Sbjct: 49  ELWHACAGPLISLPKKGSVVVYIPQGHFEQAQ-------DFPVTAYNIPTHVFCRVLDVK 101

Query: 108 LKAEPDTDEVFAQVTLLPESNQ--------DENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           L AE  +DEV+ QV L+PES Q        D +A  +E           H FCKTLTASD
Sbjct: 102 LHAEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEAMVKSTTPHMFCKTLTASD 161

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RGQPRRHLL +G
Sbjct: 162 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTG 221

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WS FV+ K+LV+GDA +FLRG++GELR+G+RRA + +     +  S   +  G L    +
Sbjct: 222 WSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGTLMDVAN 281

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           A+S+   F+  Y PR S SEFI+P +++M+S+  +YS+GMRF+MRFE E++ E+RFTG +
Sbjct: 282 ALSSRCAFSACYNPRVSSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDSAERRFTGLV 341

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           +GI D DP RW  SKWRCL VRWD+     R  RVS W+IEP  +  A N+L     KR 
Sbjct: 342 LGISDVDPVRWPGSKWRCLLVRWDDIEA-GRHNRVSPWEIEPFGS--ASNNLMAAGLKRT 398

Query: 400 RSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           R  M  +  +       G+S    D   +  F +VLQGQE 
Sbjct: 399 RIGMTSTKMEFPAPNGIGTS----DFGESLRFQKVLQGQEI 435


>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 886

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/373 (53%), Positives = 266/373 (71%), Gaps = 22/373 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 21  CLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPP--------PPPRFHVHSFCKT 154
           + NV + A+ +T EV+AQ+TL P S +++    KEP  P         P  +    FCKT
Sbjct: 81  LHNVTMHADAETGEVYAQMTLQPLSPEEQ----KEPFLPIELGAGSNQPTNY----FCKT 132

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S+ PP QEL A+DLH NEW+FRHIFRGQP+RH
Sbjct: 133 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRH 192

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFVS+KRLVAGD+ IF+  +N +L +G+RRA R Q  +PSSV+SS SMH+G+L
Sbjct: 193 LLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLL 252

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQ 333
           A A HA +T + FT++Y PR  PSEF++P  +Y++++ +   S+GMRF+M FE EE+  +
Sbjct: 253 AAAAHAAATNSRFTIFYNPR--PSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVR 310

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLP 392
           R+ GTI  I D D +RW +S WR +KV WDE++   +  RVSLW+IEP +A P    + P
Sbjct: 311 RYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFP 370

Query: 393 MPRPKRPRSNMLP 405
           + R KRP ++ LP
Sbjct: 371 L-RLKRPWASGLP 382


>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
          Length = 1139

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/359 (54%), Positives = 252/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 37  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 96

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           +  V L A+PDTDEV+AQ+TL P +   + A++         R  +  FCKTLTASDTST
Sbjct: 97  LHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTST 156

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+D+H N W FRHI+RGQP+RHLL +GWS+
Sbjct: 157 HGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSL 216

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ I +R E  +L +G+RRA RQ  N+ SSV+SS SMH+GVLA A HA +
Sbjct: 217 FVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAA 276

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 277 NSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITG 336

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  L   P    KRPR
Sbjct: 337 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFGVKRPR 395


>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
          Length = 838

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/368 (52%), Positives = 256/368 (69%), Gaps = 2/368 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV Y PQGH EQV ASTN+  D  +P Y  LP +++C+
Sbjct: 19  CLNSELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKEIDAHIPNYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++           P +   + FCKTLTASDTST
Sbjct: 79  LHDVTMHADVETDEVYAQMTLQPLTQQEQKDAYVPTVLGFPSKQPTNYFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD ++QPP QEL A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ IF+  +  +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 199 FVSAKRLVAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SPSEF++P+ ++ +++ +   S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESGVRRYMGTITG 318

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
             D DP RW +S WR +KV WDE++   R  RVSLW IEP    P   S    R KRP  
Sbjct: 319 KCDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPLTTFPMYPSPFALRLKRPWQ 378

Query: 402 NMLPSSPD 409
             LPS  D
Sbjct: 379 PGLPSLYD 386


>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
          Length = 801

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/362 (53%), Positives = 254/362 (70%), Gaps = 10/362 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  +  +P Y  LP +++C+
Sbjct: 19  CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPSLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+ L P + +++      +E   P   P  +    FCKTLTAS
Sbjct: 79  LHNVTMHADVETDEVYAQMVLQPLTQEEQKDTFVPIELGIPSKQPSNY----FCKTLTAS 134

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD ++QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLV GD+ IF+R E  +L +G+R A R Q  VPSS++SS SMH+G+LA A 
Sbjct: 195 GWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSMLSSDSMHIGLLAAAA 254

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FTV+Y PR+S SEF++P  +Y++++     S+GMRF+M FE EE+  +R+ G
Sbjct: 255 HAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMG 314

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI GI D D  RW +S WR +KV WDE++   R  R SLW+IEP    P   SL   R K
Sbjct: 315 TITGIGDLDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEPLTTFPMYPSLFPLRLK 374

Query: 398 RP 399
           RP
Sbjct: 375 RP 376


>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 758

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/392 (52%), Positives = 263/392 (67%), Gaps = 14/392 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           +L +ELWHACAG LV++P  G RV YFPQGHIEQV AST + AD  +P Y  LPS++ C 
Sbjct: 3   SLNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLFCL 62

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+ +TDEV+AQ+TLLP  N ++ A+   P    P +     FCKTLTASDTST
Sbjct: 63  LDNVSLHADHETDEVYAQMTLLPIQNSEKEAL-LAPDSVIPNKQPSEYFCKTLTASDTST 121

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFS+ RR A++  PPLD ++ PP QEL A+DLH  +W FRHI+RGQPRRHLL +GWSV
Sbjct: 122 HGGFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLTTGWSV 181

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ +F+R +   L +G+RRA RQQ  +PSSV+SS SMH GVLA A HA +
Sbjct: 182 FVSIKRLQAGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFGVLAAASHAAA 241

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + F ++Y PR SPSEF++P  +Y +++ N   ++GMRF+M FE EE+  +++ GTI  
Sbjct: 242 TSSRFKIFYNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESNVRKYMGTITC 301

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRP- 399
           I D DP RW  S WR LKV WDE+    R  RVSLW+IEP   P  L   P+  R KRP 
Sbjct: 302 IGDLDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIEPTPTPFLLCPPPVALRSKRPQ 361

Query: 400 ---------RSNMLPSSPDSSVLTREGSSKLN 422
                    +S+M P   D SV  + G  +L+
Sbjct: 362 EDALEMLMKKSHMWPHGSDPSVSLKVGGLRLD 393


>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
          Length = 955

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/352 (54%), Positives = 251/352 (71%), Gaps = 15/352 (4%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T +V + ++P Y
Sbjct: 32  GAKKV------INSELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNY 85

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDEN----AVEKEPPPPPPPRFHV 148
            +LPS++LC+V N+ + A+ +TDEV+AQ+TL P +++ +     A+        PP +  
Sbjct: 86  PNLPSQLLCQVHNITMHADKETDEVYAQMTLQPVNSETDVFPIPALGSYAKSKHPPEY-- 143

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
             FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W FRHI+R
Sbjct: 144 --FCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR 201

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L +GVRRA RQQ  + SSV+S+ S
Sbjct: 202 GQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDS 261

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           MH+GVLA A HA S+G+ FT+YY PRTSPS F+VP  +Y ++     S+GMRF M FE E
Sbjct: 262 MHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVVPLARYNKANYVQQSVGMRFAMMFETE 321

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           E+ ++R+TGTIVG+ D DP RW +SKWR L+V WDE     RPERVS+W IE
Sbjct: 322 ESSKRRYTGTIVGVSDYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 373


>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 736

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/406 (48%), Positives = 260/406 (64%), Gaps = 21/406 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++  ELWHACAGPL+++P++G  V Y PQGH E V+       D  +  YD+P  + CRV
Sbjct: 49  SVCLELWHACAGPLISLPKKGSVVVYLPQGHFEHVQ-------DFPVTAYDIPPHVFCRV 101

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAV---------EKEPPPPPPPRFHVHSFCKT 154
           ++V+L AE  +DEV+ QV L+PES Q E ++         E+E           H FCKT
Sbjct: 102 LDVKLHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIVKSTTPHMFCKT 161

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EWRFRHI+RGQPRRH
Sbjct: 162 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRH 221

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+ K+LV+GDA +FLRG++GELR+G+RRA + +     +V S   ++   L
Sbjct: 222 LLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPATL 281

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
               +A+ST   F+V Y PR S SEFI+P  ++++S+  +YS+GMRF+MRFE E+A E+R
Sbjct: 282 KGVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAERR 341

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            TG I GI D DP RW  SKWRCL VRWD+     R  RVS W+IEP+ +    ++L   
Sbjct: 342 CTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEA-ARRNRVSPWEIEPSGSASNSSNLMSA 400

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
             KR R  M     +       G+S    D   +  F +VLQGQE 
Sbjct: 401 GLKRTRIGMTSVKLEFPTPDGIGAS----DFGESLRFRKVLQGQEI 442


>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
 gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
          Length = 1143

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/359 (53%), Positives = 253/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+  +LW+ACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 36  AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 95

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V L A+PDTDEV+AQ+TL P +   + A++         R  +  FCKTLTASDTST
Sbjct: 96  LHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTST 155

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++ LPPLD S QPP QEL A+D+H N W FRHIFRGQP+RHLL +GWS+
Sbjct: 156 HGGFSVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSL 215

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FV  KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+GVLA A HA +
Sbjct: 216 FVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAA 275

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 276 NNSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGMRRYMGTITG 335

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 336 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPFFGVKRPR 394


>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
          Length = 1122

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 249/343 (72%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  + AD  +P Y +LPSK++C 
Sbjct: 19  TINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADF-IPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P +  D+ A+          +     FCKTLTASDTST
Sbjct: 78  LHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QE+ AKDLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E  +L +G++RA RQQ  + SSVISS SMH+G+LA A HA S
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAAS 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P  +Y +++ N+ S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPSAKYNKALYNHASLGMRFRMMFETEESGVRRYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            D DP RW++S+WR L+V WDE++   RP RVS+W IEP + P
Sbjct: 318 TDVDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTP 360


>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
 gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
           truncatula]
 gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
          Length = 682

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/409 (47%), Positives = 262/409 (64%), Gaps = 20/409 (4%)

Query: 41  PEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKIL 100
           P+ ++  ELWHACAGPL+++P++G  V Y PQGH EQ         D  +   ++P  + 
Sbjct: 46  PQGSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAH-------DFPVSACNIPPHVF 98

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAV---------EKEPPPPPPPRFHVHSF 151
           CRV++V+L AE  +DEV+ QV L+PE+ Q E  V         E+E           H F
Sbjct: 99  CRVLDVKLHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKSTTPHMF 158

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG+EWRFRHI+RGQP
Sbjct: 159 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRHIYRGQP 218

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLL +GWS FV+ K+LV+GDA +FLRGE+GELR+G+RRA++ + +     +S   +  
Sbjct: 219 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGLSGMQLDP 278

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           G L    +A+S  + F+V Y PR S SEFI+P +++++S+  +YS GMRF+MRFE E+A 
Sbjct: 279 GSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETEDAA 338

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
           E+RFTG I GI DADP RW  SKW+CL VRWD+        RVS W+IEP+ +    ++L
Sbjct: 339 ERRFTGLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSASNSSNL 398

Query: 392 PMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
                KR R     +  +  V    G+S    D   +  F +VLQGQE 
Sbjct: 399 MAASLKRTRIGFTSAKLEFPVPNGIGAS----DFGESLRFRKVLQGQEI 443


>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
          Length = 1088

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 256/376 (68%), Gaps = 5/376 (1%)

Query: 30  STTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           S+  G +  G     +  ELW+ACAGPLV +P  G  V YFPQGH EQV AS  + AD Q
Sbjct: 6   SSCGGDEEAGMRRSKVNQELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAQ 65

Query: 90  MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQ---DENAVEKEPPPPPPPR 145
           +P Y +LPSK++C + NV ++A+PDTDEV+A++TL P SN    D+  +          R
Sbjct: 66  IPSYPNLPSKLICILHNVTMEADPDTDEVYARMTLQPVSNVTQCDKEILLASEIALKQSR 125

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
                FCKTLTASDTSTHGGFSV RR A+   P LD S QPP QEL A+DLH N W FRH
Sbjct: 126 PQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPQLDFSLQPPAQELQARDLHDNTWTFRH 185

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
           IFRGQP+RHLL +GWS+F+S KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+S
Sbjct: 186 IFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDGKHQLLLGIRRANRQPTNLSSSVLS 245

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMR 324
           S SMH+GVLA A HA +  + FT++Y PR SPSEF++P+ +Y +++  N  S+GMRF+M 
Sbjct: 246 SDSMHIGVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMM 305

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FE EE+  +R+ GTI GI D DP RW+ S+WR ++V WDE +   R  RVSLW+IEP +A
Sbjct: 306 FETEESGTRRYMGTITGISDLDPVRWKSSQWRSIQVAWDEAAPTERRTRVSLWEIEPVIA 365

Query: 385 PPALNSLPMPRPKRPR 400
           P  +   P+   KR R
Sbjct: 366 PFFIYPSPLFTAKRAR 381


>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
 gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
          Length = 1120

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 247/343 (72%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 19  TINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P +  D++A+          R     FCKTLTASDTST
Sbjct: 78  LHNVALHADPETDEVYAQMTLQPVNKYDKDAILASDFGLKQNRQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL AKDLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           F+S+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVISS SMH+G+LA A HA +
Sbjct: 198 FISTKRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGILAAAAHAAA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT+YY PR SPSEF+VP  +Y +++    S+GMRF+M FE EE+  +R+ GT+ GI
Sbjct: 258 NNSPFTIYYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTVTGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            D DP RW++S+WR L+V WDE++   RP RVS+W IEP + P
Sbjct: 318 SDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTP 360


>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
          Length = 730

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/418 (49%), Positives = 264/418 (63%), Gaps = 30/418 (7%)

Query: 41  PEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKIL 100
           P  A+  ELWHACAGP+  +PR+G  V YFPQGH+EQ+        D       +P  + 
Sbjct: 61  PPSAVCLELWHACAGPVAPMPRKGSVVVYFPQGHLEQLGG------DAAAANAPVPPHVF 114

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE-----------PPPPPPPRFHV- 148
           CRV++V L A+  TDEV+AQ++LLPE   +E AV ++                  RF   
Sbjct: 115 CRVVDVSLHADASTDEVYAQLSLLPE---NEEAVRRKREGAEEGSGGEDGETGKQRFSRM 171

Query: 149 -HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
            H FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QELAAKDLHG EW+FRHI+
Sbjct: 172 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIY 231

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + +       + S 
Sbjct: 232 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQ 291

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEG 327
             +LG LA   HAV+T  MF +YY PR S SEFIVPY ++ +S+   +S+G+RFKMR+E 
Sbjct: 292 CSNLGTLANVAHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSLSQPFSVGLRFKMRYES 351

Query: 328 EEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPA 387
           E+A E+R+TG I G  DADP  WR SKW+CL VRWD+     RP RVS W+IE  L   A
Sbjct: 352 EDAAERRYTGIITGTGDADPM-WRGSKWKCLLVRWDDDVECRRPNRVSPWEIE--LTSSA 408

Query: 388 LNS-LPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
             S L  P  KR +  +   +P+  V    G      D   +  F +VLQGQE    R
Sbjct: 409 SGSHLATPASKRLKPCLSHVNPEYMVPHGGGRP----DFVESAQFRKVLQGQELLGYR 462


>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
          Length = 809

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/364 (53%), Positives = 254/364 (69%), Gaps = 14/364 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P    RV YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 20  CLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQ 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS------FCKTLT 156
           + +V + A+ +TDEV+AQ+TL P + Q++N       P  P    + S      FCKTLT
Sbjct: 80  LHDVTMHADVETDEVYAQMTLQPLNPQEQND------PYLPAEMGIMSKQPTNYFCKTLT 133

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKFRHIFRGQPKRHLL 193

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH+G+LA 
Sbjct: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAA 253

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRF 335
           A HA +T + FT+++ PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+
Sbjct: 254 AAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 313

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
            GTI  + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R
Sbjct: 314 MGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLR 373

Query: 396 PKRP 399
            K P
Sbjct: 374 VKHP 377


>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
          Length = 794

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/386 (51%), Positives = 266/386 (68%), Gaps = 4/386 (1%)

Query: 29  NSTTSGVKRVGDP--EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVA 86
           +S++SG+ + G    + +L +ELWHACAGPLV++P  G RV YFPQGH EQV  STN+  
Sbjct: 4   SSSSSGIVQPGQEGEKKSLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEV 63

Query: 87  DQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPR 145
           +  +P Y  L  +++C++ NV + A+ +TDEV+AQ+TL P + Q++           P +
Sbjct: 64  NGHIPNYPSLSPQLICQLHNVTMHADMETDEVYAQMTLQPLNQQEQKDSYLPAELGVPSK 123

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
              + FCKTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL A+DLH  EW+FRH
Sbjct: 124 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRH 183

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
           IFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+S
Sbjct: 184 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 243

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMR 324
           S SMH+G+LA A HA +T + FT++Y PR SPSEF++P  +Y +++     S  MRF+M 
Sbjct: 244 SDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFHTRISDDMRFRML 303

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FE +E+  +R+ G I GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP   
Sbjct: 304 FETDESSVRRYMGRITGISDLDPVRWSNSHWRSVKVIWDESTAGERQPRVSLWEIEPLTT 363

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDS 410
            P   SL   R KRP    LP+ PD+
Sbjct: 364 FPMYPSLFPLRLKRPWHPGLPTFPDN 389


>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
          Length = 831

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/436 (46%), Positives = 267/436 (61%), Gaps = 51/436 (11%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++  ELWHACAGPL+++P++G  V YFPQGH+EQ+       +D     YDLP  + CRV
Sbjct: 45  SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL-------SDYPAVAYDLPPHVFCRV 97

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV---------HSFCKT 154
           ++V+L AE  TDEV+AQV+L+PE+   +   E E          +         H FCKT
Sbjct: 98  VDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKT 157

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EWRFRHI+RGQPRRH
Sbjct: 158 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRH 217

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+ K+LV+GDA +FLRG +GELR+G+RRA + +G+ P   + S  ++L  L
Sbjct: 218 LLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTL 277

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
               +A+ST ++F + Y PR S SEFI+P  ++ +SI +++S GMRFKMR E E+A E+R
Sbjct: 278 TAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERR 337

Query: 335 FTGTIVGIEDADPQRWRDSKWRC------------------------------LKVRWDE 364
           +TG I GI D DP RW  SKWRC                              L+VRWD+
Sbjct: 338 YTGLITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDD 397

Query: 365 TSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVD 424
                R  RVS W+IE + +     SL +P  KR R  +  + PD SV    G S    D
Sbjct: 398 IEA-NRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSVPNGMGVS----D 452

Query: 425 PSSATGFSRVLQGQEF 440
              ++ F +VLQGQE 
Sbjct: 453 FGESSRFQKVLQGQEI 468


>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
 gi|224028907|gb|ACN33529.1| unknown [Zea mays]
 gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
          Length = 936

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/358 (54%), Positives = 245/358 (68%), Gaps = 23/358 (6%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 30  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIP 83

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y  LPS++LC+V N+ L A+ +TDE++AQ+TL P        V  E    P P    ++
Sbjct: 84  NYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQP--------VHSETDVFPIPTLGAYT 135

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 136 KSKHSSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 195

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L VGVRRA RQQ  + SS
Sbjct: 196 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSS 255

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           V+S+ SMH+GVLA A HA S+G  FTVYY PRTSPS F++P  +Y  +     S+GMRF 
Sbjct: 256 VLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNTATYLQPSVGMRFA 315

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           M FE EE+ ++R TGTIVGI D +P RW +SKWR L+V WDE     RPERVSLW IE
Sbjct: 316 MMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373


>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
 gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
          Length = 1109

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/364 (53%), Positives = 256/364 (70%), Gaps = 2/364 (0%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPS 97
           G  + ++  ELW ACAGPLV++P  G  V YFPQGH EQV AS  +  D Q+P Y +LPS
Sbjct: 26  GVEKKSINQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPS 85

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           K+ C + NV L A+P+TDEV+AQ+TL P  + D++A+ +        +     FCKTLTA
Sbjct: 86  KLFCLLHNVTLHADPETDEVYAQMTLQPVPSFDKDALLRSDLTLKSNKPQTDFFCKTLTA 145

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL 
Sbjct: 146 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLLT 205

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS+FVS KRL AGD+ +F+R +  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A
Sbjct: 206 TGWSLFVSGKRLFAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 265

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA +  + FTV+Y PR SPSEF++P  +Y +++  N  S+GMRF+M FE EE+  +R+ 
Sbjct: 266 AHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYM 325

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTI GI D DP RW++S+WR L+V WDE++   +  RVS+W+IEP  AP  +   P  R 
Sbjct: 326 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 385

Query: 397 KRPR 400
           KRPR
Sbjct: 386 KRPR 389


>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
          Length = 1125

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 248/343 (72%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  + AD  +P Y +LPSK++C 
Sbjct: 19  TINSELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAASMQKEADF-IPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P +  D+ A+          +     FCKTLTASDTST
Sbjct: 78  LHNVALHADPETDEVYAQMTLQPVNKYDKEALLASDMGLKQNQQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QE+ AKDLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E  +L +G++RA RQQ  + SSVISS SMH+G+LA A HA S
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAAS 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P  +Y +++ N  S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPLAKYNKALFNQVSLGMRFRMMFETEESGVRRYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            D DP RW++S+WR L+V WDE++   RP RVS+W IEP + P
Sbjct: 318 TDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTP 360


>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
 gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
 gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
          Length = 1096

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/355 (53%), Positives = 250/355 (70%), Gaps = 2/355 (0%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW+ACAGPLV++P +G  + YFPQGH EQV AS  + AD Q+P Y +LPSK++C + +V
Sbjct: 8   ELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHSV 67

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 166
            + A+PDTDEV+A++TL P SN D+  +          R     FCKTLTASDTSTHGGF
Sbjct: 68  TMLADPDTDEVYARMTLQPVSNCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGF 127

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV RR A+   P LD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 128 SVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 187

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTM 286
           KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 188 KRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ 247

Query: 287 FTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 345
           FT+YY PR S SEF++P+ +Y +++  N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 248 FTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDL 307

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           DP RW+ S WR ++V WDE +   R  RVSLW+IEP +AP  +   P+   KRPR
Sbjct: 308 DPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPR 362


>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
          Length = 1034

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/396 (52%), Positives = 263/396 (66%), Gaps = 9/396 (2%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +LPS++LC + NV
Sbjct: 29  ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 88

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 166
            L A+P+TDEV+AQ+TL P    D+ ++ +        +     FCKTLTASDTSTHGGF
Sbjct: 89  TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 148

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV RR A++  PPLD S QPP QEL AKDLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 149 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 208

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTM 286
           KRL AGDA +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 209 KRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 268

Query: 287 FTVYYKPRTSPSEFIVPYDQYME-SIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 345
           FTV+Y PR SPSEF++P  +Y + +  N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 269 FTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 328

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLP 405
           DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P  R KRPR   +P
Sbjct: 329 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGMP 388

Query: 406 ---SSPDSSVLTRE----GSSKLNVDPSSATGFSRV 434
              SS   ++  R     G      DP +  G S V
Sbjct: 389 DDESSDLENLFKRTMPWLGDDICMKDPQAVHGLSLV 424


>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
 gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
          Length = 1113

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/364 (54%), Positives = 252/364 (69%), Gaps = 5/364 (1%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  + Q+P Y +LPSK+LC + NV
Sbjct: 26  ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASLKKDVNAQIPNYPNLPSKLLCLLHNV 85

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 166
            L A+P+TDEV+ Q+TL P S+ D++A+ +        +     FCKTLTASDTSTHGGF
Sbjct: 86  TLHADPETDEVYVQMTLQPVSSFDKDALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 145

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 146 SVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 205

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTM 286
           KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 206 KRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 265

Query: 287 FTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 345
           FTVYY PR SPSEF++P  +Y +++  N  S+GMRF+M FE EE+  +R  GTI GI D 
Sbjct: 266 FTVYYNPRASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESGTRRHMGTITGISDL 325

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLP 405
           D  RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P  R K PR    P
Sbjct: 326 DAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQ---P 382

Query: 406 SSPD 409
             PD
Sbjct: 383 GMPD 386


>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
          Length = 936

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/358 (54%), Positives = 245/358 (68%), Gaps = 23/358 (6%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 30  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIP 83

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y  LPS++LC+V N+ L A+ +TDE++AQ+TL P        V  E    P P    ++
Sbjct: 84  NYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQP--------VHSETDVFPIPTLGAYT 135

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 136 KSKHPSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 195

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L VGVRRA RQQ  + SS
Sbjct: 196 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSS 255

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           V+S+ SMH+GVLA A HA S+G  FTVYY PRTSPS F++P  +Y  +     S+GMRF 
Sbjct: 256 VLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFA 315

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           M FE EE+ ++R TGTIVGI D +P RW +SKWR L+V WDE     RPERVSLW IE
Sbjct: 316 MMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373


>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
          Length = 1099

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/359 (54%), Positives = 254/359 (70%), Gaps = 10/359 (2%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +LPSK+LC + NV
Sbjct: 27  ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKRDVDAQIPNYPNLPSKLLCLLHNV 86

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVHSFCKTLTASDTST 162
            L A+P+TDEV+AQ+TL P S+ D+ A+ +         P P F    FCKTLTASDTST
Sbjct: 87  TLHADPETDEVYAQMTLQPVSSFDKEALLRSDLSLKSNKPQPEF----FCKTLTASDTST 142

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S Q P QEL A+DLH N W+FRHI+RG+P+RHLL +GWS+
Sbjct: 143 HGGFSVPRRAAEKIFPPLDFSMQTPAQELVARDLHENVWKFRHIYRGKPKRHLLTTGWSL 202

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 203 FVSGKRLFAGDSVLFIRDETQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 262

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FTV+Y PR S SEF++P  +Y +++ N+  S GMRF+M FE EE+  +R+ GTI G
Sbjct: 263 NNSPFTVFYNPRASLSEFVIPLAKYYKAVYNHQISPGMRFRMMFETEESGTRRYMGTITG 322

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P+ R KRPR
Sbjct: 323 ISDIDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPSPLFRSKRPR 381


>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
          Length = 1117

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/396 (52%), Positives = 263/396 (66%), Gaps = 9/396 (2%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +LPS++LC + NV
Sbjct: 31  ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 90

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 166
            L A+P+TDEV+AQ+TL P    D+ ++ +        +     FCKTLTASDTSTHGGF
Sbjct: 91  TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 150

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV RR A++  PPLD S QPP QEL AKDLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 151 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 210

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTM 286
           KRL AGDA +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 211 KRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 270

Query: 287 FTVYYKPRTSPSEFIVPYDQYME-SIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 345
           FTV+Y PR SPSEF++P  +Y + +  N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 271 FTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 330

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLP 405
           DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P  R KRPR   +P
Sbjct: 331 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGMP 390

Query: 406 ---SSPDSSVLTRE----GSSKLNVDPSSATGFSRV 434
              SS   ++  R     G      DP +  G S V
Sbjct: 391 DDESSDLENLFKRTMPWLGDDICMKDPQAVHGLSLV 426


>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
          Length = 600

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/360 (52%), Positives = 256/360 (71%), Gaps = 12/360 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE++YYFPQG+IE VEAST +  ++  P+ DLPSK+ CRVI
Sbjct: 24  MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            +QLK E ++DE +A++TL+P++ Q     + E    P     V+SF K LTASDTS  G
Sbjct: 84  AIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP----LVNSFTKVLTASDTS--G 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GF V ++HA ECLPPLDMS+  PTQEL A DLHGN+WRF H +RG P+RHLL +GW+ F 
Sbjct: 138 GFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 197

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SK+LVAGD  +F+RGE GELRVG+RRA  QQGN+PSS+IS  SM  GV+A+A HA    
Sbjct: 198 TSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQ 257

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
            MF V YKP    S+FIV YD++++++ N +++G RF MRFEG++  E+R+ GTI+G+ D
Sbjct: 258 CMFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSD 317

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNML 404
             P  W+ S+WR L+V+WDE ++  RP +VS W+IE  +  PALN   +PRP   ++  L
Sbjct: 318 FSPH-WKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLM--PALN---VPRPSLLKNKRL 371


>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
          Length = 935

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/358 (54%), Positives = 245/358 (68%), Gaps = 23/358 (6%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 29  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIP 82

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y  LPS++LC+V N+ L A+ +TDE++AQ+TL P        V  E    P P    ++
Sbjct: 83  NYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQP--------VHSETDVFPIPTLGAYT 134

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 135 KSKHPSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 194

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L VGVRRA RQQ  + SS
Sbjct: 195 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSS 254

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           V+S+ SMH+GVLA A HA S+G  FTVYY PRTSPS F++P  +Y  +     S+GMRF 
Sbjct: 255 VLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFA 314

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           M FE EE+ ++R TGTIVGI D +P RW +SKWR L+V WDE     RPERVSLW IE
Sbjct: 315 MMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372


>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
          Length = 929

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/356 (54%), Positives = 249/356 (69%), Gaps = 21/356 (5%)

Query: 33  SGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV 92
           SGV++       L +ELWHACAGPLV++P+ G  V+YFPQGH EQV AST + A  Q+P 
Sbjct: 35  SGVRK------TLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPN 88

Query: 93  Y-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS- 150
           Y +LP ++LC+V NV L A+ +TDE++AQ+TL P +++ E         P     H HS 
Sbjct: 89  YPNLPYQLLCQVQNVTLHADKETDEIYAQMTLQPLNSEREVF-------PISDFGHKHSK 141

Query: 151 -----FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
                FCKTLTASDTSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRH
Sbjct: 142 HPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRH 201

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
           I+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E  +LRVGVRR  RQQ  +PSSV+S
Sbjct: 202 IYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLS 261

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMR 324
           + SMH+GVLA A HA +  + FT++Y PR  PSEF++P  +Y +S+     S+GMRF M 
Sbjct: 262 ADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMM 321

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           FE EE+ ++R+ GTIVGI D DP RW  SKWR ++V WDE     +  RVS+W+IE
Sbjct: 322 FETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 377


>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
 gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
          Length = 952

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/362 (51%), Positives = 253/362 (69%), Gaps = 2/362 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPLV++P  G  V YFPQGH EQV AS ++  D  +P Y  LPSK++C++
Sbjct: 21  INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDT-IPSYPSLPSKLICKL 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +++ L A+ +TDEV+AQ+TL P +  D +A+          +     FCKTLTASDTSTH
Sbjct: 80  LSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD + QPP QEL AKDLH   W+FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL+AGD+ +F+R E  +L +G+RRA R Q  + SSV+S  SMH+G+LA A HA + 
Sbjct: 200 VSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCDSMHIGILAAAAHAAAN 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE E++  +R+ GTI GI 
Sbjct: 260 SSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIG 319

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D DP RW++S WR L+V WDE++   R  RVS+W+IEP   P  +   P  RPK P+   
Sbjct: 320 DLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPKLPKQPG 379

Query: 404 LP 405
           +P
Sbjct: 380 MP 381


>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
          Length = 780

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/362 (53%), Positives = 253/362 (69%), Gaps = 10/362 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  +  +P Y  LP +++C+
Sbjct: 19  CLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPTLPPQLICQ 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+ L P + +++      +E   P   P  +    FCKTLTAS
Sbjct: 79  LHNVTMHADLETDEVYAQMVLQPLTQEEQKDTFVPIELGVPSKQPSNY----FCKTLTAS 134

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD ++QPP QEL AKDLH NEW+FRHIFRGQP+RHLL +
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLV GD+ IF+R E  +L +G+R A R Q  VPSS++SS SMH+G+LA A 
Sbjct: 195 GWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHATRPQTIVPSSMLSSDSMHIGLLAAAA 254

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FTV+Y PR+S SEF++P  +Y++++     S+GMRF+M FE EE+  +R+ G
Sbjct: 255 HAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMG 314

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI GI D D   W +S WR +KV WDE++   R  R SLW+IEP    P   SL   R K
Sbjct: 315 TITGIGDLDSVLWPNSHWRSVKVGWDESTAGERQARASLWEIEPLTTFPMYPSLFPLRLK 374

Query: 398 RP 399
           RP
Sbjct: 375 RP 376


>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
 gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
 gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
 gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
          Length = 598

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/360 (52%), Positives = 258/360 (71%), Gaps = 14/360 (3%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE++YYFPQG+IE VEAST +  ++  P+ DLPSK+ CRVI
Sbjct: 24  MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            +QLK E ++DE +A++TL+P++ Q     + E    P     V+SF K LTASDTS  G
Sbjct: 84  AIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP----LVNSFTKVLTASDTS--G 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GF V ++HA ECLPPLDMS+  PTQEL A DLHGN+WRF H +RG P+RHLL +GW+ F 
Sbjct: 138 GFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 197

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SK+LVAGD  +F+RGE GELRVG+RRA  QQGN+PSS+IS  SM  GV+A+A HA    
Sbjct: 198 TSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQ 257

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
            MF V YKPR+  S+FIV YD++++++ N +++G RF MRFEG++  E+R+ GTI+G+ D
Sbjct: 258 CMFIVVYKPRS--SQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSD 315

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNML 404
             P  W+ S+WR L+V+WDE ++  RP +VS W+IE  +  PALN   +PRP   ++  L
Sbjct: 316 FSPH-WKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLM--PALN---VPRPSLLKNKRL 369


>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/347 (55%), Positives = 247/347 (71%), Gaps = 13/347 (3%)

Query: 41  PEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKI 99
           P  A+ +ELWHACAGPLV++P+ G  VYYFPQGH EQV  ST + A  Q+P Y +LPS++
Sbjct: 37  PRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQL 96

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP-----PPRFHVHSFCKT 154
           +C+V NV L A+ DTDE++AQ++L P ++      EK+  P P     P +     FCKT
Sbjct: 97  MCQVHNVTLHADKDTDEIYAQMSLQPVNS------EKDIFPIPDFGLKPSKHPSEFFCKT 150

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S QPPTQEL  +DLH   + FRHI+RGQP+RH
Sbjct: 151 LTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRH 210

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFVS+KRL AGDA +F+R E  +L +GVRRA RQQ ++PSSV+S+ SMH+GVL
Sbjct: 211 LLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVL 270

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQ 333
           A A HA +  + FT++Y PR  PSEF++P  +Y +S+     S+GMRF M FE EE+ ++
Sbjct: 271 AAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKR 330

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           R+ GTIVGI D DP  W  SKWR L+V WDE+    +  RVS W+IE
Sbjct: 331 RYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 377


>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
          Length = 795

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/366 (52%), Positives = 253/366 (69%), Gaps = 2/366 (0%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-D 94
           +R+   +  L +ELWHACAGPLV +P    RV YFPQGH EQV ASTN+     +P Y  
Sbjct: 1   ERLAGEKKCLNSELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPG 60

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKT 154
           LP +++C++ +V + A+ +TDEV+AQ+TL P S Q++           P     + FCKT
Sbjct: 61  LPPQLICQLHDVTMHADAETDEVYAQMTLQPLSPQEQKDAFLPAELGIPTNQPTNYFCKT 120

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S+QPP+QEL A+DLH  EW+FRHIFRGQP+RH
Sbjct: 121 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRH 180

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFVS+KRLV GD+ IF+  E  +L +G+RRA R Q  +P SV+SS SMH+G+L
Sbjct: 181 LLTTGWSVFVSAKRLVTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGLL 240

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQ 333
           A A HA +T + FTV+Y PR SPSEF++   +Y++++ +   S+GMRF+M FE EE+  +
Sbjct: 241 AAAAHAAATNSRFTVFYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSVR 300

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R+ GTI  I D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   SL  
Sbjct: 301 RYMGTITSISDLDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTTFPMYPSLFP 360

Query: 394 PRPKRP 399
            R KRP
Sbjct: 361 LRLKRP 366


>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
 gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
          Length = 714

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/415 (47%), Positives = 264/415 (63%), Gaps = 39/415 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V YFPQGH+EQ+        D  + VYDLPS + CRV++V+
Sbjct: 49  ELWHACAGPLISLPKRGSVVVYFPQGHLEQL-------PDLPLAVYDLPSHVFCRVVDVK 101

Query: 108 LKAEPDTDEVFAQVTLLPESNQDEN-----------------AVEKEPPPPPPPRFHVHS 150
           L AE  +DEV+AQV+L+PES + E                  A  K   P        H 
Sbjct: 102 LHAEAASDEVYAQVSLVPESEEIEQKLREGIFEGDGEEEDGEATVKMTTP--------HM 153

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD ++Q P+QEL AKDLHG+EW+FRHI+RGQ
Sbjct: 154 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQ 213

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS FV+ K+LV+GDA +FLRGE+GELR+GVRRA + +         +H ++
Sbjct: 214 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPAQWNHQLN 273

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
                   +A+ST + F +YY PR S SEFI+P++++++S+  ++S GMRFKMRFE E+A
Sbjct: 274 QISPGDVANAISTRSFFHIYYNPRASSSEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDA 333

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP--ALAPPAL 388
            E+R+TG I G+ + DP RW  SKW+CL VRWD+     R  RVS W++EP  + +  + 
Sbjct: 334 AERRYTGIITGVSELDPARWPGSKWKCLLVRWDDREA-NRLSRVSPWEVEPSGSGSISSS 392

Query: 389 NSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTL 443
           N+   P  KR RS +  S  +  +    G+        S      VLQGQE  + 
Sbjct: 393 NNFMAPGLKRSRSGLPSSKAEFPIPDGIGAPGFRESSRS----QEVLQGQEIMSF 443


>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
          Length = 925

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/359 (53%), Positives = 251/359 (69%), Gaps = 13/359 (3%)

Query: 29  NSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           +S    +K  G    A+ +ELWHACAGPLV++P+ G  VYYFPQGH EQV  ST + A  
Sbjct: 3   SSVEENIKAGGLVSEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATS 62

Query: 89  QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----- 142
           Q+P Y +LPS+++C+V NV L A+ DTDE++AQ++L P ++      EK+  P P     
Sbjct: 63  QIPNYPNLPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNS------EKDIFPIPDFGLK 116

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
           P +     FCKTLTASDTSTHGGFSV RR A++  PPLD S QPPTQEL  +DLH   + 
Sbjct: 117 PSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYT 176

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWSVFVS+KRL AGDA +F+R E  +L +GVRRA RQQ ++PSS
Sbjct: 177 FRHIYRGQPKRHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSS 236

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRF 321
           V+S+ SMH+GVLA A HA +  + FT++Y PR  PSEF++P  +Y +S+     S+GMRF
Sbjct: 237 VLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRF 296

Query: 322 KMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
            M FE EE+ ++R+ GTIVGI D DP  W  SKWR L+V WDE+    +  RVS W+IE
Sbjct: 297 GMMFETEESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 355


>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
          Length = 934

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/357 (54%), Positives = 250/357 (70%), Gaps = 23/357 (6%)

Query: 33  SGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV 92
           SGV++       L +ELWHACAGPLV++P+ G  V+YFPQGH EQV AST + A  Q+P 
Sbjct: 38  SGVRK------TLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPN 91

Query: 93  Y-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV-HS 150
           Y +LPS++LC+V N  L A+ +TDE++AQ+TL P +++ E          P   F + HS
Sbjct: 92  YPNLPSQLLCQVQNATLHADKETDEIYAQMTLQPLNSEREVF--------PISDFGLKHS 143

Query: 151 ------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
                 FCKTLTASDTSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FR
Sbjct: 144 KHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFR 203

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HI+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E  +LRVGVRR  RQQ  +PSSV+
Sbjct: 204 HIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVL 263

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKM 323
           S+ SMH+GVLA A HA +  + FT++Y PR  PSEF++P  +Y +S+     S+GMRF M
Sbjct: 264 SADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGM 323

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
            FE EE+ ++R+ GTIVGI D DP RW  SKWR ++V WDE     +  RVS+W+IE
Sbjct: 324 MFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 380


>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
 gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
          Length = 1057

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/343 (55%), Positives = 247/343 (72%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 19  CINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDF-IPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+ +TDEV+AQ+TL P S  ++ A+          R     FCKTLTASDTST
Sbjct: 78  LHNVTLHADVETDEVYAQMTLQPVSKYEKEALLASDMGLKQNRQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVISS SMH+G+LA A HA +
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P+ +Y +++    S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPFSKYNKALYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            D DP RW++S+WR L+V WDE++   RP RVS+W+IEP + P
Sbjct: 318 SDMDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTP 360


>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
          Length = 1147

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/359 (53%), Positives = 252/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+  +LW+ACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 40  AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 99

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V L A+PDTDEV+AQ+TL P +   + A++         R  +  FCKTLTASDTST
Sbjct: 100 LHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTST 159

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++ LPPLD   QPP QEL A+D+H N W FRHIFRGQP+RHLL +GWS+
Sbjct: 160 HGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSL 219

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FV  KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+GVLA A HA +
Sbjct: 220 FVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAA 279

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ ++ +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 280 NNSPFTIFYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRYMGTITG 339

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 340 ITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPFFGVKRPR 398


>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
          Length = 833

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/387 (50%), Positives = 261/387 (67%), Gaps = 19/387 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 27  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLP-----------ESNQDENAVEKEPPPPPPPRFHVHS- 150
           + +V + A+ +TDEV+AQ+TL P           +    E  ++++     P    + S 
Sbjct: 87  LHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSK 146

Query: 151 -----FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
                FCKTLTASDTSTHGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRH
Sbjct: 147 QPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRH 206

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
           IFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+S
Sbjct: 207 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 266

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMR 324
           S SMH+G+LA A HA +T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M 
Sbjct: 267 SDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRML 326

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           FE EE+  +R+ GTI  + DADP RW  S WR +KV WDE++   RP RVSLW+IEP   
Sbjct: 327 FETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT 386

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSS 411
            P   SL   R K P  + + S  D S
Sbjct: 387 FPMYPSLFPLRVKHPWYSGVASLHDDS 413


>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
 gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
          Length = 1119

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/343 (54%), Positives = 246/343 (71%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           ++ +ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 19  SINSELWHACAGPLVALPPVGSLVVYFPQGHSEQVAASMQKETDF-IPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+ +TDEV+AQ+TL P +  D+ A+          R     FCKTLTASDTST
Sbjct: 78  LHNVTLHADAETDEVYAQMTLQPVNKYDKEALLASDMGLKQSRQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVISS SMH+G+LA A HA +
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P+ +Y +++    S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPFSKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            D DP RW+ S+WR L+V WDE++   RP RVS+W++EP + P
Sbjct: 318 SDLDPVRWKTSQWRNLQVGWDESTAGERPSRVSIWEVEPVVTP 360


>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
          Length = 840

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/408 (50%), Positives = 258/408 (63%), Gaps = 32/408 (7%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           E+W ACAG L+++PR+G  V YF QGH+EQ  AS +         + LP ++ CRVINV 
Sbjct: 29  EVWQACAGSLISLPRKGSVVVYFXQGHLEQAGASCDG--------WGLPPQVFCRVINVN 80

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAV-EKEPPPPPPPRFHV-------HSFCKTLTASD 159
           L A+  +DEV+AQV+L P     E  + E+E        F         H FCKTLTASD
Sbjct: 81  LHADQVSDEVYAQVSLTPIPEPVEKGLPEEEVREDGEEEFEFVSRSATPHMFCKTLTASD 140

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EW+FRHI+RGQPRRHLL +G
Sbjct: 141 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHIYRGQPRRHLLTTG 200

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-QQGNVPSSVISSHSMHLGVLATAW 278
           WSVFV+ K+LVAGDA +FLRGE+GELR+G+RRA R + G+VPS  + S ++     A   
Sbjct: 201 WSVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGSVPSLALLSQNLSGSTFAAVS 260

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
            AVST ++F V Y PR SP+EFIVPY +Y ++    +S+GMRFKM+ E E+  E+R TG 
Sbjct: 261 KAVSTKSVFHVSYNPRASPAEFIVPYWKYYKNFNQQFSLGMRFKMKIETEDTAERRCTGL 320

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE-----PALAPPALNSLPM 393
           I G+ D DP RW  SKWRCL VRWDE S   R +RVS W+I+     P  +PPA   L  
Sbjct: 321 ISGVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEIDLLGSVPVFSPPA-TGLKR 379

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFS 441
           PR   P      S PD S  +  G S           F +VLQGQE S
Sbjct: 380 PRISLPSIQTGCSPPDGSRFSDFGES---------VRFHKVLQGQEKS 418


>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
 gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
          Length = 1113

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/355 (53%), Positives = 249/355 (70%), Gaps = 2/355 (0%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW+ACAGPLV++P +G  + YFPQGH EQV AS  + AD Q+P Y +LPSK++C + +V
Sbjct: 25  ELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHSV 84

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 166
            + A+PDTDEV+A++TL P +  D+  +          R     FCKTLTASDTSTHGGF
Sbjct: 85  TMLADPDTDEVYARMTLQPVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGF 144

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV RR A+   P LD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 145 SVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 204

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTM 286
           KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 205 KRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ 264

Query: 287 FTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 345
           FT+YY PR S SEF++P+ +Y +++  N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 265 FTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDL 324

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           DP RW+ S WR ++V WDE +   R  RVSLW+IEP +AP  +   P+   KRPR
Sbjct: 325 DPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPR 379


>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
          Length = 832

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 211/418 (50%), Positives = 276/418 (66%), Gaps = 14/418 (3%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
            +G KRV      L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D   P
Sbjct: 17  VTGEKRV------LNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHTP 70

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y  L  +++C++ NV + A+ +TDEV+AQ+TL P + Q++           P R   + 
Sbjct: 71  NYPSLQPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDSYLAAELGVPSRQPTNY 130

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++  PPLD ++QPP QEL A+DLH NEW+FRHIFRGQ
Sbjct: 131 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQ 190

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           P+RHLL +GWSVFVS+KRLVAGD+ +F+  +  +L +G+RRA R Q  +PSSV+SS SMH
Sbjct: 191 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRAHRPQTVMPSSVLSSDSMH 250

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEE 329
           LG+LA A HA  T + FT++Y PR S SEF++P  +Y++++ +   S+GMRF+M FE EE
Sbjct: 251 LGLLAAAAHAAPTNSRFTIFYNPRASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEE 310

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           +  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+IEP    P   
Sbjct: 311 SSVRRYMGTITGICDLDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYP 370

Query: 390 SLPMP-RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGN 446
           S P P R KRP  + LPS        +E    + +  SS   + R LQ   F  +  N
Sbjct: 371 S-PFPLRLKRPWPSGLPSFHG----LKEDDMGMGMGMSSPLMWDRGLQSMNFQGMGVN 423


>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
          Length = 1136

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 246/343 (71%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  + AD  +P Y +LPSK++C 
Sbjct: 19  TMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADF-IPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P +  ++ A+          R     FCKTLTASDTST
Sbjct: 78  LHNVALHADPETDEVYAQMTLQPVNKYEKEAILASDIGLKQNRQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++ LPPLD S QPP QEL AKDLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E   L +G+RRA RQQ  + SSVISS SMH+G+LA A HA +
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF+VP  +Y +++    S+GMRF+M FE EE+  + + GTI GI
Sbjct: 258 NNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRGYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            D DP RW+ S+WR ++V WDE++   RP RVS+W+IEP + P
Sbjct: 318 SDLDPVRWKSSQWRNIQVGWDESTAGERPRRVSIWEIEPVVTP 360


>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
          Length = 816

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/370 (51%), Positives = 256/370 (69%), Gaps = 3/370 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 25  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQ 84

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 85  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 144

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRHIFRG P+RHLL +GWSV
Sbjct: 145 HGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLLTTGWSV 203

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRLVAGD+ +F+  E  +L +G+R A R Q  +PSSV+SS SMH+G+LA A HA +
Sbjct: 204 FVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 263

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
           T + FT++Y PR SP+EF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI  
Sbjct: 264 TNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 323

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   SL   R K P  
Sbjct: 324 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWY 383

Query: 402 NMLPSSPDSS 411
           + L +  D S
Sbjct: 384 SGLAALHDDS 393


>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
 gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
 gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
 gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
          Length = 590

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/388 (47%), Positives = 260/388 (67%), Gaps = 25/388 (6%)

Query: 17  ETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIE 76
           ETG +     N+    SG+  +   +  +Y +LW  CAGPL  +P+ GE VYYFPQG+IE
Sbjct: 2   ETGNVV----NAQPELSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIE 55

Query: 77  QVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEK 136
            V+AST +  ++  P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q     + 
Sbjct: 56  LVDASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQS 115

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           E    P     V+SF K LTASDTS +GGF V ++HA ECLPPL +    P QEL AKDL
Sbjct: 116 ENQFRP----LVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDL 167

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HGN+WRFRH +RG P+RH L +GW+ F +SK+LV GD  +F+RGE GELRVG+RRA  QQ
Sbjct: 168 HGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQ 227

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
           GN+PSS++S   M  GV+A+A HA+    +F V YKP    S+FIV YD++++++ N + 
Sbjct: 228 GNIPSSIVSIDCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFI 287

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +G RF MRFEG++  E+R+ GTI+G+ D  P  W+ S+WR L+V+WDE ++  RP +VS 
Sbjct: 288 VGSRFTMRFEGDDFSERRYFGTIIGVNDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSP 346

Query: 377 WKIEPALAPPALNSLPMPRPKRPRSNML 404
           W+IE  ++  ALN         PRS++L
Sbjct: 347 WEIEHLMS--ALNV--------PRSSLL 364


>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
 gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
          Length = 739

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/420 (47%), Positives = 260/420 (61%), Gaps = 35/420 (8%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E +  +    A        LP  + CRV
Sbjct: 52  AVCLELWHACAGPVAPLPRKGTVVVYLPQGHLEHLGDAAAAAAGGAPAPAALPPHVFCRV 111

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQD-------------------ENAVEKEPPPPPPP 144
           ++V L A+  TDEV+AQ+ L+ E N+D                     AV++     P  
Sbjct: 112 VDVTLHADASTDEVYAQLALVAE-NEDVARRLRGGSEDGSAGDGDDGEAVKQRFSRMP-- 168

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
               H FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EWRFR
Sbjct: 169 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFR 224

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + +       +
Sbjct: 225 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPAL 284

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
            +   +LG LA   HAV+T ++F +YY PR S SEFI+PY ++M+S    +S G+RFKMR
Sbjct: 285 YNQCSNLGSLANVAHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKSFSQQFSAGLRFKMR 344

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           +E ++A E+R TG I GI DADP  WR SKW+CL VRWD+     RP R+S W+IE   +
Sbjct: 345 YESDDASERRCTGVIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRRPNRISPWEIE-LTS 402

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
             + + L  P  KR +   LP  PD  V    G      D + +  F +VLQGQE    R
Sbjct: 403 SVSGSHLSAPNAKRLKP-CLP--PDYLVPNGSGCP----DFAESAQFHKVLQGQELLGYR 455


>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
          Length = 1131

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/343 (55%), Positives = 244/343 (71%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  + AD  +P Y +LPSK++C 
Sbjct: 19  TINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADF-IPSYPNLPSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+P+TDEV+AQ+TL P +  ++ A+          R     FCKTLTASDTST
Sbjct: 78  LHNVALHADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQNRQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL AKDLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E   L +G+RRA RQQ  + SSVISS SMH+G+LA A HA +
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF+VP  +Y +      S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 258 NNSPFTIFYNPRASPSEFVVPLAKYNKVTYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            D DP RW+ S+WR ++V WDE++   RP RVS+W+IEP + P
Sbjct: 318 NDLDPVRWKSSQWRNIQVGWDESTAGERPSRVSIWEIEPVVTP 360


>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
          Length = 620

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/407 (47%), Positives = 266/407 (65%), Gaps = 32/407 (7%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE VYYFPQG+IE   AST +  ++  P+ DLPSK+ CRVI
Sbjct: 1   MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIEL--ASTREELNELQPICDLPSKLQCRVI 58

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            + LK E ++DE++A++TL+P++ Q     + E    P     V+SF K LTASDTS +G
Sbjct: 59  AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRP----LVNSFTKVLTASDTSAYG 114

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSV ++HA ECLPPLDMS+  P QE+ A DLH N+WRFRH +RG P+RH L +GW+ F+
Sbjct: 115 GFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFI 174

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           +SK+LV GD  +F+RGE GELRVG+RRA  QQGN+PSS++S   M  GV+A+A HA    
Sbjct: 175 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 234

Query: 285 TMFTVYYKPR--------TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
            +F V YKPR           S+FIV YD++++++ N +++G RF MRFEG++  E+R+ 
Sbjct: 235 CIFIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF 294

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           GTI+G+ D  P  W+ S+WR L+V+WDE ++  RP +VS W+IE  +  PALN       
Sbjct: 295 GTIIGVSDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV--PALNV------ 345

Query: 397 KRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTL 443
             PRS++L +     V    GSS  ++ P   T      QGQE   L
Sbjct: 346 --PRSSLLKNKRLREV-NEFGSSSSHLLPPILT------QGQEIGQL 383


>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/365 (52%), Positives = 251/365 (68%), Gaps = 19/365 (5%)

Query: 47  TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVIN 105
           +ELWHACAGPLV++P  G +V YFPQGH EQV  ST + AD  +P Y +L   ++C + N
Sbjct: 3   SELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTLDN 62

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDE------NAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           + L A+ +TDEV+AQ+ L+P  + D+      +AV +   P          FCKTLTASD
Sbjct: 63  ITLHADLETDEVYAQMVLIPSQDPDKETMLLPDAVVQNKQP-------TEYFCKTLTASD 115

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR-GQPRRHLLQS 218
           TSTHGGFS+ RR A++  P LD ++QPP QEL A+DLH  +W FRHI+R GQPRRHLL +
Sbjct: 116 TSTHGGFSIPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTT 175

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRL AGDA +F+R + G+L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 176 GWSVFVSAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGILAAAS 235

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTG 337
           HA  T + FT++Y PR SPSEF++P  +Y +++     ++GMRF+M FE EE+  +R+ G
Sbjct: 236 HAAQTSSRFTIFYNPRQSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTVRRYMG 295

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP--MPR 395
           T+ GI D DP RW +S WR LKV WDE++   R  RVSLW+IEP L  P L+  P    R
Sbjct: 296 TVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEP-LTTPFLSCPPPLASR 354

Query: 396 PKRPR 400
            KR R
Sbjct: 355 SKRAR 359


>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
 gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
          Length = 949

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/342 (54%), Positives = 242/342 (70%), Gaps = 9/342 (2%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  VYYFPQGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 42  AINSELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQ 101

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE---PPPPPPPRFHVHSFCKTLTASD 159
           V NV L A+ D+DE++AQ++L P +++ +  +  +    P   P  F    FCKTLTASD
Sbjct: 102 VQNVTLHADKDSDEIYAQMSLQPVNSEKDVFLVPDFGLRPSKHPNEF----FCKTLTASD 157

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRHI+RGQP+RHLL +G
Sbjct: 158 TSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLTTG 217

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WS+FV +KRL AGD+ +F+R E  +L +GVRRA RQQ  +PSSV+S+ SMH+GVLA A H
Sbjct: 218 WSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAH 277

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           A +  + FT++Y PR  PSEF++P  +Y + +     S GMRF M FE EE+ ++R+ GT
Sbjct: 278 AAANRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMGT 337

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           IVGI D DP RW  SKWR L+V WDE     +  RVS W+IE
Sbjct: 338 IVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379


>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
          Length = 736

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/476 (43%), Positives = 286/476 (60%), Gaps = 25/476 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGHIE +  +         PV  LP  + CRV
Sbjct: 48  AVCLELWHACAGPVAPLPRKGSVVVYLPQGHIEHLGDAAAAGGGAPPPVA-LPPHVFCRV 106

Query: 104 INVQLKAEPDTDEVFAQVTLLPES----------NQDENAVEKEPPPPPPPRFHV--HSF 151
           ++V L A+  TDEV+AQ+ L+ E+          ++D +A + +       RF    H F
Sbjct: 107 VDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMF 166

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EWRFRHI+RGQP
Sbjct: 167 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQP 226

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLL +GWS FV+ K+LV+GDA +FLRG+NGELR+GVRRA + +       + +  ++L
Sbjct: 227 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNL 286

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           G L    HAV+T ++F +YY PR S SEFI+P+ ++++S    +S G RFK+++E ++A 
Sbjct: 287 GSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDAS 346

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
           E+R TG I GI DADP  WR SKW+CL VRWD+     +P R+S W+IE   +  + + +
Sbjct: 347 ERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LTSSVSGSHM 404

Query: 392 PMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR--GNFAE 449
             P  KR +  +   +PD   L   GS +   D + +  F +VLQGQE    R   N A 
Sbjct: 405 SAPNAKRLKPCLPHVNPD--YLVPNGSGR--PDFAESAQFHKVLQGQELLGYRTHDNAAV 460

Query: 450 RESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFG 505
             S   +      +   S  ++  +++    R G     P G   P ++   SGFG
Sbjct: 461 ATSQPCEATNMQYIDERSCSNDASNIIPGVPRIGVRT--PLG--SPRFSYRCSGFG 512


>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
          Length = 1116

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/358 (53%), Positives = 250/358 (69%), Gaps = 5/358 (1%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW+ACAGPLV++P +G  + YFPQGH EQV AS  + AD Q+P Y +LPSK++C + +V
Sbjct: 25  ELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHSV 84

Query: 107 QLKAEPDTDEVFAQVTLLPESNQ---DENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            + A+PDTDEV+A++TL P SN    D+  +          R     FCKTLTASDTSTH
Sbjct: 85  TMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTH 144

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A+   P LD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+F
Sbjct: 145 GGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLF 204

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 205 VSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAAN 264

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FT+YY PR S SEF++P+ +Y +++  N  S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 265 NSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGI 324

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
            D DP RW+ S WR ++V WDE +   R  RVSLW+IEP +AP  +   P+   KRPR
Sbjct: 325 SDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPR 382


>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
          Length = 736

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/476 (43%), Positives = 286/476 (60%), Gaps = 25/476 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGHIE +  +         PV  LP  + CRV
Sbjct: 48  AVCLELWHACAGPVAPLPRKGSVVVYLPQGHIEHLGDAAAAGGGAPPPVA-LPPHVFCRV 106

Query: 104 INVQLKAEPDTDEVFAQVTLLPES----------NQDENAVEKEPPPPPPPRFHV--HSF 151
           ++V L A+  TDEV+AQ+ L+ E+          ++D +A + +       RF    H F
Sbjct: 107 VDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMF 166

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
           CKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EWRFRHI+RGQP
Sbjct: 167 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQP 226

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLL +GWS FV+ K+LV+GDA +FLRG+NGELR+GVRRA + +       + +  ++L
Sbjct: 227 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNL 286

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           G L    HAV+T ++F +YY PR S SEFI+P+ ++++S    +S G RFK+++E ++A 
Sbjct: 287 GSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDAS 346

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
           E+R TG I GI DADP  WR SKW+CL VRWD+     +P R+S W+IE   +  + + +
Sbjct: 347 ERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LTSSVSGSHM 404

Query: 392 PMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR--GNFAE 449
             P  KR +  +   +PD   L   GS +   D + +  F +VLQGQE    R   N A 
Sbjct: 405 SAPNAKRLKPCLPHVNPD--YLVPNGSGR--PDFAESAQFHKVLQGQELLGYRTHDNAAV 460

Query: 450 RESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFG 505
             S   +      +   S  ++  +++    R G     P G   P ++   SGFG
Sbjct: 461 ATSQPCEATNMQYIDERSCSNDASNIIPGVPRIGVRT--PLG--SPRFSYRCSGFG 512


>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
 gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/433 (45%), Positives = 271/433 (62%), Gaps = 47/433 (10%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V Y PQGH+EQ+        D  + +YDLP  + CRV++V+
Sbjct: 49  ELWHACAGPLISLPKRGSIVVYVPQGHLEQL-------PDLPLGIYDLPPHVFCRVVDVK 101

Query: 108 LKAEPDTDEVFAQVTLLPESNQDEN-----------------AVEKEPPPPPPPRFHVHS 150
           L AE  +D+V+AQV+L+PES + E                  A  K   P        H 
Sbjct: 102 LHAEAASDDVYAQVSLVPESEEIEQKLREGVFEGDGEEEDVEATVKTTTP--------HM 153

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD ++Q P+QEL AKDLHG+EW+FRHI+RGQ
Sbjct: 154 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQ 213

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS FV+ K+LV+GDA +FLRGE+GELR+GVRRA + +       + +  ++
Sbjct: 214 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQQLN 273

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
              LA   +A+S  + F +YY PR S SEFI+P++++++S+  ++S GMR KMRFE E+A
Sbjct: 274 QSSLADVANAISMRSAFRIYYNPRASSSEFIIPFNKFLKSLDQSFSAGMRVKMRFETEDA 333

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            E+R+TG I GI + DP RW  SKW+CL VRWD+T    R  RVS W++EP+ +     S
Sbjct: 334 AERRYTGLITGISELDPTRWPGSKWKCLLVRWDDTEA-NRHSRVSPWEVEPSGSVSGSGS 392

Query: 391 LP--------MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF-- 440
                      P  KR RS +     +  +    G+S   V    ++ F  VLQGQE   
Sbjct: 393 GSISSSNNSMAPGLKRSRSGLPSLKAEFPIPDGIGASDFRV----SSRFQEVLQGQEIMR 448

Query: 441 STLRGNFAERESN 453
           S +RG+    E++
Sbjct: 449 SGIRGSIPTSENS 461


>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
          Length = 1149

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/359 (52%), Positives = 252/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 41  VINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 100

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + N+ L A+ +TDEV+AQ+TL P ++  + A++         R     FCKTLTASDTST
Sbjct: 101 LHNITLHADLETDEVYAQMTLQPVTSYGKEALQLSELALKQSRPQNEFFCKTLTASDTST 160

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QE+ A+DLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 161 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 220

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 221 FVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHADA 280

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 281 NNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTITG 340

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 341 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGSKRPR 399


>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
          Length = 954

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/344 (53%), Positives = 240/344 (69%), Gaps = 13/344 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV +P+ G   YYFPQGH EQV  ST + A  Q+P Y +LPS++LC+
Sbjct: 42  AINSELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLLCQ 101

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP-----PPRFHVHSFCKTLTA 157
           V NV L A+ +TDE++AQ++L P ++      EK+  P P     P +     FCKTLTA
Sbjct: 102 VQNVTLHADKETDEIYAQMSLKPVNS------EKDVFPVPDFGLKPSKHPSEFFCKTLTA 155

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++  PPLD + QPP+QEL  +DLH N W FRHI+RGQP+RHLL 
Sbjct: 156 SDTSTHGGFSVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKRHLLT 215

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS+FV +KRL AGD+ +F+R E  +L +GVRRA RQQ  +PSSV+S+ SMH+GVLA A
Sbjct: 216 TGWSLFVGAKRLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIGVLAAA 275

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA +  + FT++Y PR  PSEF++P   Y ++I     S+GMRF M FE EE+ ++R+ 
Sbjct: 276 AHAAANRSPFTIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGKRRYM 335

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           GTIV   D DP RW  SKWR L+V WDE     +  RVS W+IE
Sbjct: 336 GTIVSTSDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379


>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
          Length = 1097

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/342 (54%), Positives = 248/342 (72%), Gaps = 2/342 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPLV++P  G  V YFPQGH EQV AS N+  D  +P Y +LPSK++C +
Sbjct: 20  INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDF-IPNYPNLPSKLICML 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  ++ A+          R     FCKTLTASDTSTH
Sbjct: 79  HNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTH 138

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 139 GGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVF 198

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVISS SMH+G+LA+A HA + 
Sbjct: 199 VSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAAN 258

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE EE+  +R+ GTI GI 
Sbjct: 259 NSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGIS 318

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           D D  RW++S+WR L+V WDE++   RP RVS+W++EP + P
Sbjct: 319 DMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVTP 360


>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
          Length = 898

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/369 (53%), Positives = 259/369 (70%), Gaps = 23/369 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV            ASTN+  D Q+P Y  LP +++C+
Sbjct: 19  CLNSELWHACAGPLVSLPAVGSRV-----------AASTNKEVDSQIPNYPSLPPQLICQ 67

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFCKTLTAS 158
           + NV + A+ +TDEV+AQ+TL P S Q++    K+P  P     P +   + FCKTLTAS
Sbjct: 68  LHNVTMHADVETDEVYAQMTLQPLSAQEQ----KDPYLPADLGTPSKQPTNYFCKTLTAS 123

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLHGNEW+FRHIFRGQP+RHLL +
Sbjct: 124 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTT 183

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWSVFVS+KRLVAGD+ +F+  EN +L +G+RRA R Q  +PSSV+SS SMH+G+LA A 
Sbjct: 184 GWSVFVSAKRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 243

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTG 337
           HA +T + FT++Y PR SPSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ G
Sbjct: 244 HAAATNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 303

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLPMPRP 396
           TI GI D DP RW +S WR +KV WDE++   +  RVSLW+IEP    P   +S P+ R 
Sbjct: 304 TITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSSFPL-RF 362

Query: 397 KRPRSNMLP 405
           KRP    LP
Sbjct: 363 KRPWPTGLP 371


>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
          Length = 867

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 240/347 (69%), Gaps = 18/347 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLVT+P+ G  VYYFPQGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 48  VINSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQ 107

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKT 154
           V NV L A+ D+DE++AQ++L P        V  E    P P F +          FCKT
Sbjct: 108 VHNVTLHADKDSDEIYAQMSLQP--------VHSERDVFPVPEFGLLRGSKHPSEFFCKT 159

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRHI+RGQP+RH
Sbjct: 160 LTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRH 219

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GVL
Sbjct: 220 LLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVL 279

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQ 333
           A A HA +  T F ++Y PR  P+EF++P  +Y ++I  +  S+ MRF M FE E++ ++
Sbjct: 280 AAAAHATANRTPFLIFYNPRACPAEFVIPIAKYRKAICGSQLSVSMRFGMMFETEDSGKR 339

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           R+ GTIVGI D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 340 RYMGTIVGISDLDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 386


>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
 gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
          Length = 1095

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/358 (53%), Positives = 251/358 (70%), Gaps = 5/358 (1%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW+ACAGPLVT+P  G  V YFPQGH EQV AS  + AD ++P Y +LPSK++C + +V
Sbjct: 27  ELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICILRSV 86

Query: 107 QLKAEPDTDEVFAQVTLLPESNQ---DENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            + A+PDTDEV+A++TL P SN    D+  +          R     FCKTLTASDTSTH
Sbjct: 87  TMLADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQTRPQTEFFCKTLTASDTSTH 146

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A+   P LD S QPP QEL A+DLH   W FRHI+RGQP+RHLL +GWS+F
Sbjct: 147 GGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLF 206

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 207 VSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAAN 266

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FTV+Y PR SPSEF++P+ +Y +++  N  S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 267 NSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITGI 326

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
            D DP RW++S+WR ++V WDE +   R  RVSLW++EP +AP  +   P+   KRPR
Sbjct: 327 SDMDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIAPFFIYPSPLFTAKRPR 384


>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
          Length = 945

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/358 (53%), Positives = 243/358 (67%), Gaps = 23/358 (6%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 29  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIP 82

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y  LP ++LC+V N+ L A+ +TDE++ Q+TL P        +  E    P P    ++
Sbjct: 83  NYPSLPPQLLCQVHNITLHADKETDEIYCQMTLQP--------LHSETDVFPIPTLGAYT 134

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 135 KSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 194

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L VGVRRA RQQ  + SS
Sbjct: 195 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSS 254

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           V+S+ SMH+GVLA A HA S+G  FT+YY PRTSPS F++P  +Y ++     S+GMRF 
Sbjct: 255 VLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFA 314

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           M FE EE+ ++R TG IVGI D DP RW +SKWR L+V WDE     RPERVS+W IE
Sbjct: 315 MMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372


>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
 gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
          Length = 950

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/344 (54%), Positives = 242/344 (70%), Gaps = 13/344 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELW+ACAGPLV++P+ G  VYYFPQGH EQV  ST + A  Q+P Y +L S++LC+
Sbjct: 41  TINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLASQLLCQ 100

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP-----PPRFHVHSFCKTLTA 157
           V NV L A+ DTDE++AQ++L P ++      EK+  P P     P +     FCKTLTA
Sbjct: 101 VHNVTLHADRDTDEIYAQMSLQPVNS------EKDVFPIPDFGLKPSKHPSEFFCKTLTA 154

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRHI+RGQP+RHLL 
Sbjct: 155 SDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 214

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PS V+S+ SMH+GVLA A
Sbjct: 215 TGWSLFVGSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIGVLAAA 274

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA +  + FT++Y PR  PSEF++P  +Y +++     S+GMRF M FE EE+ ++R+ 
Sbjct: 275 AHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEESGKRRYM 334

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           GTIVGI D DP RW  SKWR L+V WDE     +  RVS W+IE
Sbjct: 335 GTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIE 378


>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
          Length = 1081

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/342 (54%), Positives = 248/342 (72%), Gaps = 2/342 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPLV++P  G  V YFPQGH EQV AS N+  D  +P Y +LPSK++C +
Sbjct: 20  INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDF-IPNYPNLPSKLICML 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  ++ A+          R     FCKTLTASDTSTH
Sbjct: 79  HNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTH 138

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 139 GGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVF 198

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVISS SMH+G+LA+A HA + 
Sbjct: 199 VSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAAN 258

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE EE+  +R+ GTI GI 
Sbjct: 259 NSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGIS 318

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           D D  RW++S+WR L+V WDE++   RP RVS+W++EP + P
Sbjct: 319 DMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVTP 360


>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
 gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
 gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
          Length = 1112

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/376 (52%), Positives = 256/376 (68%), Gaps = 6/376 (1%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +LPSK++C + N+
Sbjct: 31  ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLVCLLHNI 90

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 166
            L A+P+ DEV+AQ+TL P  + D+ A+ +        +     FCKTLTASDTSTHGGF
Sbjct: 91  TLHADPEADEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQTEFFCKTLTASDTSTHGGF 150

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 151 SVPRRSAEKIFPPLDYSMQPPAQELVARDLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSG 210

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTM 286
           KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 211 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 270

Query: 287 FTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 345
           FTV+Y PR S SEF++P  +Y ++   +  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 271 FTVFYNPRASHSEFVIPLAKYYKATYSSQVSLGMRFRMMFETEESGTRRYMGTITGISDL 330

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SLPMPRPKRPRSNML 404
           DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +  + P  R KRPR   L
Sbjct: 331 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPTPPFFRSKRPR---L 387

Query: 405 PSSPDSSVLTREGSSK 420
           P  PD      +G  K
Sbjct: 388 PGMPDDDCSDLDGLFK 403


>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 728

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/413 (47%), Positives = 260/413 (62%), Gaps = 23/413 (5%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
           V  P  ++  ELWHACAGPL+++P+ G  V Y PQGH E V+       D  +  +D+P 
Sbjct: 34  VVSPPPSVCLELWHACAGPLISLPKRGSVVVYLPQGHFEHVQ-------DFPVNAFDIPP 86

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAV---------EKEPPPPPPPRFHV 148
            + CRV++V+L AE  +DEV+ QV L+PES Q E+++         E+E           
Sbjct: 87  HVFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTP 146

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EWRFRHI+R
Sbjct: 147 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYR 206

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQPRRHLL +GWS FV+ K+LV+GDA +FLRG +GELR+G+RRA + +     +V S   
Sbjct: 207 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVPSGQQ 266

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           ++   L    +A+ST   F+V Y PR     FI+P  +++ES+  +YS+GMRF+MRFE E
Sbjct: 267 LNPATLMDVVNALSTRCAFSVCYNPRYFSXXFIIPVHKFLESLDCSYSVGMRFRMRFETE 326

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           +A ++RFTG I GI D DP RW  SKWRCL VRWD+     R  RVS W+IEP+ +    
Sbjct: 327 DAADRRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDIEA-ARHNRVSPWEIEPSGSASNS 385

Query: 389 NSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNV-DPSSATGFSRVLQGQEF 440
           ++L     KR R  M      S+ L     + +   D   +  F +VLQGQE 
Sbjct: 386 SNLMAAGLKRNRIEM-----TSAKLEFPNPNGIQTSDFGESLRFRKVLQGQEI 433


>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 601

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/373 (51%), Positives = 255/373 (68%), Gaps = 16/373 (4%)

Query: 28  SNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD 87
           S  T  G KR       +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE VEAST +  +
Sbjct: 14  SGITVDGSKRY------MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLN 67

Query: 88  QQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH 147
           +  P+ DLPSK+ CRVI +QLK E ++DE +A++TL+P + Q     + E    P     
Sbjct: 68  ELQPIVDLPSKLQCRVITIQLKVERNSDETYAEITLMPYTTQVVIPTQNENQFRP----L 123

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
           V+SF K LTASDTS HGGFSV R+ A ECLPPLDMS+  P QEL   DLHGN+WRF+H +
Sbjct: 124 VNSFTKVLTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSY 183

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RG PRRHLL +GW+ F++SK+LVAGD  +FLRGE GELRVG+RRA  QQGN+PSS+IS  
Sbjct: 184 RGTPRRHLLTTGWNAFITSKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIE 243

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEG 327
           SM  GV+A+A HA     MF V YKPR+  S+FIV YD++++++ N +++G RF  RFE 
Sbjct: 244 SMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVNYDKFLDAMNNKFNVGSRFTKRFEE 301

Query: 328 EEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPA 387
           ++  E+R+ GTI+G+ D  P  W+ S+WR LK   DE ++ PRP++VS W+IE +     
Sbjct: 302 DDFSERRYFGTIIGVIDFSPH-WKCSEWRSLK---DEFASFPRPDKVSPWEIEYSTPSSN 357

Query: 388 LNSLPMPRPKRPR 400
           +  L M + K  R
Sbjct: 358 VLRLSMLKNKCSR 370


>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
          Length = 608

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/402 (48%), Positives = 254/402 (63%), Gaps = 20/402 (4%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V YFPQGH+EQ         D    +Y LP  + CR+++V+
Sbjct: 54  ELWHACAGPLISLPKRGSLVLYFPQGHLEQA-------PDFSAAIYGLPPHVFCRILDVK 106

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEK--------EPPPPPPPRFHV-HSFCKTLTAS 158
           L AE  TDEV+AQV+LLPES   E  V +        E       R +  H FCKTLTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD S+  P+QEL A+DLHG EWRFRHI+RGQPRRHLL +
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA + +G    S   + +M+    +   
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ST ++F++ Y P+ S S FI+P  ++++ +   + IGMRFK R E E+A E+R  G 
Sbjct: 287 HAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGI 346

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           I GI D DP RW  SKWRCL VRWD+       +RVS W+IEP+ +     S     PKR
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKR 406

Query: 399 PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            R  +    PD  V   EG    + + S    F RVLQGQE 
Sbjct: 407 SRIGISSGKPDIPV--SEGIRATDFEES--LRFQRVLQGQEI 444


>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
 gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
 gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 505

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/338 (50%), Positives = 237/338 (70%), Gaps = 9/338 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW+ CAGPL  +P+ GE+VYYFPQGHIE +E ST    D   P++DLPSK+ CRV+
Sbjct: 22  MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            +  K + +TDEV+AQ++L+P++ +    V          R  V+ F K LTASD S  G
Sbjct: 82  AIDRKVDKNTDEVYAQISLMPDTTE----VMTHNTTMDTRRPIVYFFSKILTASDVSLSG 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS--GWSV 222
           G  + +++A EC PPLDMS+   TQ L AKDL+G EW F+H+FRG P+RH+  S  GWSV
Sbjct: 138 GLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           F ++KRL+ GD F+ LRGENGELR G+RRA  QQG++PSSVIS++ M  GV+A+  +A  
Sbjct: 198 FATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFK 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
           T  MF V YKP  S S+F++ YD++++++ NNY +G RF+M+FEG++  E+R+ GTI+G+
Sbjct: 258 TKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGV 315

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
            D  P  W+DS+WR LKV+WDE S   RP +VS W IE
Sbjct: 316 NDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 352


>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
           thaliana [Arabidopsis thaliana]
          Length = 619

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/371 (48%), Positives = 246/371 (66%), Gaps = 35/371 (9%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQ--------------------------V 78
           +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE                           V
Sbjct: 24  VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLSLLSLSV 83

Query: 79  EASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP 138
           E ST +  ++  P+ DLPSK+ CRVI + LK E ++DE +A++TL+P++ Q     + E 
Sbjct: 84  ETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNEN 143

Query: 139 PPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHG 198
              P     V+SF K LTASDTS HGGF V ++HA ECLP LDMS+  P QEL A DLHG
Sbjct: 144 QFRP----LVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHG 199

Query: 199 NEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN 258
           N+WRF H +RG P+RHLL +GW+ F +SK+LVAGD  +F+RGE GELRVG+RRA  QQGN
Sbjct: 200 NQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGN 259

Query: 259 VPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIG 318
           +PSS++S   M  GV+A+A HA     MFTV YKPR+  S+FIV YD++++++ N +++G
Sbjct: 260 IPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAVNNKFNVG 317

Query: 319 MRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWK 378
            RF MR EG++  E+R  GTI+G+ D  P  W+ S+WR L+V+WDE ++ P P++VS W 
Sbjct: 318 SRFTMRLEGDDFSERRCFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFTSFPGPKKVSPWD 376

Query: 379 IEPALAPPALN 389
           IE  +  PA+N
Sbjct: 377 IEHLM--PAIN 385


>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
          Length = 1049

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/370 (52%), Positives = 253/370 (68%), Gaps = 5/370 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ ++LWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 19  AINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDF-IPNYPNLPSKLICL 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V L A+ +TDEV+AQ+TL P +  D  A+          R     FCKTLTASDTST
Sbjct: 78  LHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKINRQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QE+ AKDLH   W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL AGD+ +F+R E  +L +G+RRA RQ   + SSVISS SMH+G+LA A HA +
Sbjct: 198 FVSTKRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT+++ PR SPSEF+VP  +Y +++    S+GMRF+M FE E+   +R+ GT+ GI
Sbjct: 258 NSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D DP RW+ S+WR L+V WDE++   RP RVS+W+IEP + P  +   P  RPK PR  
Sbjct: 318 SDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPPPFFRPKYPRQ- 376

Query: 403 MLPSSPDSSV 412
             P  PD  +
Sbjct: 377 --PGMPDDEL 384


>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
          Length = 1141

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/381 (51%), Positives = 257/381 (67%), Gaps = 15/381 (3%)

Query: 22  PMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAS 81
           P EG+   +T +G             ELWHACAGPLV++P  G  V YFPQGH EQV AS
Sbjct: 20  PCEGERKAATING-------------ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAAS 66

Query: 82  TNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP 140
             +  + Q+P Y +LPSK++C + +V L+A+PDTDEV+AQ+TL P +   + A++     
Sbjct: 67  MQKDVEAQVPNYPNLPSKLICLLHSVILQADPDTDEVYAQMTLQPVNTYAKEALQLSELA 126

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
               R  +  FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL A+D+H N 
Sbjct: 127 LRQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNI 186

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 260
           W FRHIFRGQP+RHLL +GWS+FVS K+L AGD+ IF+R E  +L +G+RRA RQ  N+ 
Sbjct: 187 WTFRHIFRGQPKRHLLTTGWSLFVSGKKLFAGDSVIFVRDEKHQLLLGIRRANRQPTNIS 246

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGM 319
           SSV+SS SMH+GVLA A HA +  + FT++Y PR SP+EF++P+ +Y +++  N  S+GM
Sbjct: 247 SSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGM 306

Query: 320 RFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKI 379
           RF+M  E EE   +R+ GTI GI D DP RW+ S+WR L+V WDE++   R  RVS+W+I
Sbjct: 307 RFRMTCETEELGTRRYMGTITGISDLDPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEI 366

Query: 380 EPALAPPALNSLPMPRPKRPR 400
           EP  AP  +   P    KR R
Sbjct: 367 EPLAAPFFICPQPFFGVKRSR 387


>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1176

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/359 (52%), Positives = 252/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ ++LWHACAGPLV +P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 38  AINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 97

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + N+ L A+ +TDEV+A++TL P ++  + A++         R     FCKTLTASDTST
Sbjct: 98  LHNITLHADLETDEVYARMTLQPVTSYGKEALQLSELALKQARPQNEFFCKTLTASDTST 157

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QE+ A+DLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 158 HGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 217

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 218 FVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 277

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 278 NNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTITG 337

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 338 INDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPR 396


>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
          Length = 1063

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/363 (52%), Positives = 255/363 (70%), Gaps = 2/363 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV +P  G  V YFPQGH EQV AS N+  D  +P Y  LPSK++C+
Sbjct: 20  AINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVDV-IPNYPSLPSKLICK 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           ++++ L A+ +TDEV+AQ+TL P S  D +A+          +  +  FCKTLTASDTST
Sbjct: 79  LLSLTLHADSETDEVYAQMTLQPVSKYDRDAMLASELGLKQNKQPMEFFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD + QPP QEL AKDLH   W+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL+AGD+ +F+R E  +L +G+RR+ R Q  + SSV+SS SMH+G+LA A HA +
Sbjct: 199 FVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSDSMHIGILAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE E++  +R+ GTI GI
Sbjct: 259 NSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGI 318

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D DP RW++S WR L+V WDE++   R  RVS+W+IEP   P  +   P  RPK P+  
Sbjct: 319 GDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPKLPKQP 378

Query: 403 MLP 405
            +P
Sbjct: 379 GMP 381


>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
 gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
          Length = 835

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/371 (52%), Positives = 257/371 (69%), Gaps = 10/371 (2%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLP 96
            G  + A+   LW  CAGPL+T+P  G +V YFPQGH EQV AST++ AD ++P Y +LP
Sbjct: 8   AGGDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLP 67

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFC 152
            ++ C + N+ L A+ + DEVFAQ+TL P S   + A+ K+P   P      +  + SF 
Sbjct: 68  PQLFCILHNITLHADQENDEVFAQMTLQPFS---QTALLKDPFLLPDFGIQTKQTIVSFS 124

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFS+ RR A++  PPLD ++ PP QEL A+DLH NEW FRHI+RGQPR
Sbjct: 125 KTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPR 184

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRL AGD  +FLR E G+  +G+RRA RQQ N+P+S++SS SM +G
Sbjct: 185 RHLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIG 244

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAP 331
           VLA A HA ST + FT++Y PR SPSEF++P  +Y +++     ++GMRF+M  E E++ 
Sbjct: 245 VLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSS 304

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NS 390
            +R+ GTI GI D DP RW +S WR LKV WDE++   +  RVS W+IEP   P  L NS
Sbjct: 305 TRRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLCNS 364

Query: 391 LPMPRPKRPRS 401
             + R KRPR+
Sbjct: 365 SFLLRSKRPRA 375


>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1176

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/359 (52%), Positives = 252/359 (70%), Gaps = 2/359 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ ++LWHACAGPLV +P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 38  AINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 97

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + N+ L A+ +TDEV+A++TL P ++  + A++         R     FCKTLTASDTST
Sbjct: 98  LHNITLHADLETDEVYARMTLQPVTSYGKEALQLSELALKQARPQNEFFCKTLTASDTST 157

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QE+ A+DLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 158 HGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 217

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 218 FVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 277

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI G
Sbjct: 278 NNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTITG 337

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           I D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRPR
Sbjct: 338 INDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPR 396


>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
          Length = 935

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/358 (54%), Positives = 244/358 (68%), Gaps = 24/358 (6%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 30  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIP 83

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y  LPS++LC+V N+ L A+ +TDE++AQ+TL P        V  E    P P    ++
Sbjct: 84  NYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQP--------VHSETDVFPIPTLGAYT 135

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 136 KSKHPSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 195

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+R QP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L VGVRRA RQQ  + SS
Sbjct: 196 FRHIYR-QPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSS 254

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           V+S+ SMH+GVLA A HA S+G  FTVYY PRTSPS F++P  +Y  +     S+GMRF 
Sbjct: 255 VLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFA 314

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           M FE EE+ ++R TGTIVGI D +P RW +SKWR L+V WDE     RPERVSLW IE
Sbjct: 315 MMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372


>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
 gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
 gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
 gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
           thaliana]
 gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
           thaliana]
 gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
 gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
          Length = 608

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/402 (48%), Positives = 253/402 (62%), Gaps = 20/402 (4%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V YFPQGH+EQ         D    +Y LP  + CR+++V+
Sbjct: 54  ELWHACAGPLISLPKRGSLVLYFPQGHLEQA-------PDFSAAIYGLPPHVFCRILDVK 106

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEK--------EPPPPPPPRFHV-HSFCKTLTAS 158
           L AE  TDEV+AQV+LLPES   E  V +        E       R +  H FCKTLTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD S+  P+QEL A+DLHG EWRFRHI+RGQPRRHLL +
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA + +G    S   + +M+    +   
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ST ++F++ Y P+ S S FI+P  ++++ +   + IGMRFK R E E+A E+R  G 
Sbjct: 287 HAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGI 346

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           I GI D DP RW  SKWRCL VRWD+       +RVS W+IEP+ +     S     PKR
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKR 406

Query: 399 PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            R       PD  V   EG    + + S    F RVLQGQE 
Sbjct: 407 SRIGFSSGKPDIPV--SEGIRATDFEES--LRFQRVLQGQEI 444


>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
          Length = 621

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 171/338 (50%), Positives = 237/338 (70%), Gaps = 9/338 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW+ CAGPL  +P+ GE+VYYFPQGHIE +E ST    D   P++DLPSK+ CRV+
Sbjct: 22  MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            +  K + +TDEV+AQ++L+P++ +    V          R  V+ F K LTASD S  G
Sbjct: 82  AIDRKVDKNTDEVYAQISLMPDTTE----VMTHNTTMDTRRPIVYFFSKILTASDVSLSG 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS--GWSV 222
           G  + +++A EC PPLDMS+   TQ L AKDL+G EW F+H+FRG P+RH+  S  GWSV
Sbjct: 138 GLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           F ++KRL+ GD F+ LRGENGELR G+RRA  QQG++PSSVIS++ M  GV+A+  +A  
Sbjct: 198 FATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFK 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
           T  MF V YKP  S S+F++ YD++++++ NNY +G RF+M+FEG++  E+R+ GTI+G+
Sbjct: 258 TKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGV 315

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
            D  P  W+DS+WR LKV+WDE S   RP +VS W IE
Sbjct: 316 NDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 352


>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
          Length = 605

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/375 (51%), Positives = 256/375 (68%), Gaps = 17/375 (4%)

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE----NAVEKEPPPPPPPRFHV-HSFC 152
           +I CRV++V+L A+ + D+V+AQVTLLPE   +E    N  E E          + H FC
Sbjct: 1   QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFC 60

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RGQPR
Sbjct: 61  KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPR 120

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFV+ K LV+GDA +FLRGE+GELR+G+RRA R   ++P SV+SS  +HL 
Sbjct: 121 RHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLS 180

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
           +L+ A +A+ST +MF V+Y PR SPSEF++PY +Y++S+    SIGMRFKMR E E++ E
Sbjct: 181 ILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAE 240

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +R TG I G  D DP RW +SKWRCL VRWD++S + R ERVS W+IEP+L+ PAL+   
Sbjct: 241 KRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSCPV 300

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERES 452
            PR KR ++ ++         T +G + L    +  +   +VLQGQE            S
Sbjct: 301 APRIKRLQTCLMS--------TLDGMNPLEFAETVRS--HKVLQGQENVAFAPTL--NRS 348

Query: 453 NESDTAEKSVVWPPS 467
           ++SD   +  +W PS
Sbjct: 349 DQSDNYSEFKIWNPS 363


>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
          Length = 608

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/402 (48%), Positives = 253/402 (62%), Gaps = 20/402 (4%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V YFPQGH+EQ         D    +Y LP  + CR+++V+
Sbjct: 54  ELWHACAGPLISLPKRGSLVLYFPQGHLEQA-------PDFSAAIYGLPPHVFCRILDVK 106

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEK--------EPPPPPPPRFHV-HSFCKTLTAS 158
           L AE  TDEV+AQV+LLPES   E  V +        E       R +  H FCKTLTAS
Sbjct: 107 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 166

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD S+  P+QEL A+DLHG EWRFRHI+RGQPRRHLL +
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA + +G    S   + +M+    +   
Sbjct: 227 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVA 286

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ST ++F++ Y P+ S S FI+P  ++++ +   + IGMRFK R E E+A E+R  G 
Sbjct: 287 HAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGI 346

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           I GI D DP RW  SKWRCL VRWD+       +RVS W+IEP+ +     S     PKR
Sbjct: 347 ISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKR 406

Query: 399 PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            R       PD  V   EG    + + S    F RVLQGQE 
Sbjct: 407 SRIGFSSGKPDIPV--SEGIRATDFEES--LRFQRVLQGQEI 444


>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
          Length = 827

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/411 (48%), Positives = 266/411 (64%), Gaps = 32/411 (7%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P++G  V YFPQGH+EQ     +QV +     YDLP +I+CRV++V+
Sbjct: 39  ELWHACAGPLISLPQKGSVVVYFPQGHLEQ-----HQVQESHTRTYDLPPQIICRVVDVK 93

Query: 108 LKAEPDTDEVFAQVTLLPESN---QDENAV-------EKEPPPPPPPRFHVHSFCKTLTA 157
           L+AE   DE++AQV+LL E      DE+ V       E         R   H FCKTLTA
Sbjct: 94  LQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIPHMFCKTLTA 153

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDL+G  WRFRHI+RGQPRRHLL 
Sbjct: 154 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQPRRHLLT 213

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ-QGNVPSSVISSHSMHLGVLAT 276
           +GWS F + K+L  GDA +FLR ++GELR+G+RRA RQ Q  VP + +      + +L+ 
Sbjct: 214 TGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSRVNMLSM 273

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
              A+S   +F +YY PR SP+EF+VPY +Y+ S  + +S+GMR K+R E E+A E+R+T
Sbjct: 274 VADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVEKRYT 333

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           G I G+ D DP RW +SKWRCL VRWD+ +     +RVS W+IE +    + +       
Sbjct: 334 GHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSLVSSFSFPLKSTS 393

Query: 397 KRPRSNMLPSS------PDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFS 441
           KRP+ N  PS       PD S L+  GS++       ++ F +VLQGQE S
Sbjct: 394 KRPKMN-FPSIITDIPLPDGSGLS--GSTE-------SSRFQKVLQGQEIS 434


>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
          Length = 1149

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/361 (52%), Positives = 252/361 (69%), Gaps = 4/361 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+  +LW+ACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C 
Sbjct: 40  AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 99

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V L A+PDTDEV+AQ+TL P +   + A++         R  +  FCKTLTASDTST
Sbjct: 100 LHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTST 159

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++ LPPLD   QPP QEL A+D+H N W FRHIFRGQP+RHLL +GWS+
Sbjct: 160 HGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSL 219

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FV  KRL AGD+ IF+R E  +L +G+RRA RQ  N+ SSV+SS SMH+GVLA A HA +
Sbjct: 220 FVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAA 279

Query: 283 TGTMFTVYYKPR--TSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
             + FT++Y PR   SP+EF++P+ ++ +++  N  S+GMRF+M FE EE   +R+ GTI
Sbjct: 280 NNSPFTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRYMGTI 339

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
            GI D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P    KRP
Sbjct: 340 TGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPFFGVKRP 399

Query: 400 R 400
           R
Sbjct: 400 R 400


>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
 gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
          Length = 1090

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/392 (50%), Positives = 262/392 (66%), Gaps = 14/392 (3%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY- 93
           +K+ G+ +  L  ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  + Q+P Y 
Sbjct: 7   LKKAGEKK-NLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYP 65

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVH 149
           +LP+K++C + NV L A+P+TDEV+AQ+TL P  + D+ A+ +         P P F   
Sbjct: 66  NLPAKLICLLHNVTLHADPETDEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQPEF--- 122

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL A+DLH N W FRH++RG
Sbjct: 123 -FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRG 181

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QP+RHLL +GWS+ VS KRL AGD+ +F+R E  +  +G+R+A RQ  N+ SSV+SS SM
Sbjct: 182 QPKRHLLTTGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSM 241

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGE 328
           H+G+LA A HA +  + FTV+Y PR  PSEF++P  +Y ++   +  S+GMRF+M FE E
Sbjct: 242 HIGILAAAAHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETE 301

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           E+  +R+ GTI GI D DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +
Sbjct: 302 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITAPFLI 361

Query: 389 NSLPMPRPKRPRSNMLPSSPDSSVLTREGSSK 420
            S P    KRPR    P  PD      +G  K
Sbjct: 362 CSSPFFSSKRPRQ---PGMPDGDYSDMDGMFK 390


>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
          Length = 902

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 239/347 (68%), Gaps = 18/347 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV +P+ G  VYYF QGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 50  VINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQ 109

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKT 154
           V NV L A+ D+DE++AQ++L P        V  E    P P F +          FCKT
Sbjct: 110 VHNVTLHADKDSDEIYAQMSLQP--------VHSERDVFPVPDFGMLRGSKHPTEFFCKT 161

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S QPPTQEL  +DLH N W FRHI+RGQP+RH
Sbjct: 162 LTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRH 221

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GVL
Sbjct: 222 LLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVL 281

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQ 333
           A A HA +  T F ++Y PR  P+EF++P  +Y ++I  +  S+GMRF M FE E++ ++
Sbjct: 282 AAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKR 341

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           R+ GTIVGI D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 342 RYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388


>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
 gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
           Full=Auxin-responsive protein IAA24; AltName:
           Full=Transcription factor MONOPTEROS
 gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
 gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
 gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
 gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
 gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
          Length = 902

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 239/347 (68%), Gaps = 18/347 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV +P+ G  VYYF QGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 50  VINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQ 109

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKT 154
           V NV L A+ D+DE++AQ++L P        V  E    P P F +          FCKT
Sbjct: 110 VHNVTLHADKDSDEIYAQMSLQP--------VHSERDVFPVPDFGMLRGSKHPTEFFCKT 161

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S QPPTQEL  +DLH N W FRHI+RGQP+RH
Sbjct: 162 LTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRH 221

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GVL
Sbjct: 222 LLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVL 281

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQ 333
           A A HA +  T F ++Y PR  P+EF++P  +Y ++I  +  S+GMRF M FE E++ ++
Sbjct: 282 AAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKR 341

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           R+ GTIVGI D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 342 RYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388


>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
 gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
           Full=Auxin-responsive protein IAA22
 gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
 gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
 gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
 gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 1086

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/362 (52%), Positives = 250/362 (69%), Gaps = 2/362 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + ++LWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 20  INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDF-IPNYPNLPSKLICLL 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            +V L A+ +TDEV+AQ+TL P +  D  A+          R     FCKTLTASDTSTH
Sbjct: 79  HSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTH 138

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD S QPP QE+ AKDLH   W FRHI+RGQP+RHLL +GWSVF
Sbjct: 139 GGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVF 198

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R E  +L +G+RRA RQ   + SSVISS SMH+G+LA A HA + 
Sbjct: 199 VSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANAN 258

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT+++ PR SPSEF+VP  +Y +++    S+GMRF+M FE E+   +R+ GT+ GI 
Sbjct: 259 SSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGIS 318

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D DP RW+ S+WR L+V WDE++   RP RVS+W+IEP + P  +   P  RPK PR   
Sbjct: 319 DLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPPPFFRPKYPRQPG 378

Query: 404 LP 405
           +P
Sbjct: 379 MP 380


>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
 gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
          Length = 826

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/370 (52%), Positives = 256/370 (69%), Gaps = 10/370 (2%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLP 96
            G  + A+   LW  CAGPL+T+P  G +V YFPQGH EQV AST++ AD ++P Y +LP
Sbjct: 8   TGGDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLP 67

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP----PPRFHVHSFC 152
            ++ C + N+ L A+ + DEVFAQ+TL P S   + A+ K+P   P      +  + SF 
Sbjct: 68  PQLFCILHNITLHADQENDEVFAQMTLQPFS---QTALLKDPFLLPDFGIQTKQTIVSFS 124

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFS+ RR A++  PPLD ++ PP QEL A+DLH NEW FRHI+RGQPR
Sbjct: 125 KTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPR 184

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWSVFVS+KRL AGD  +FLR E G+  +G+RRA RQQ N+P+S++SS SM +G
Sbjct: 185 RHLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIG 244

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAP 331
           VLA A HA ST + FT++Y PR SPSEF++P  +Y +++     ++GMRF+M  E E++ 
Sbjct: 245 VLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSS 304

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NS 390
            +R+ GTI GI D DP RW +S WR LKV WDE++   +  RVS W+IEP   P  L NS
Sbjct: 305 TRRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLCNS 364

Query: 391 LPMPRPKRPR 400
             + R KRPR
Sbjct: 365 SFLLRSKRPR 374


>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/352 (54%), Positives = 247/352 (70%), Gaps = 18/352 (5%)

Query: 41  PEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKI 99
           P  A+ +ELWHACAGPLV++P+ G  VYYFPQGH EQV  ST + A  Q+P Y +LPS++
Sbjct: 38  PRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQL 97

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP-----PPRFHVHSFCKT 154
           +C+V NV L A+ DTDE++AQ++L P ++      EK+  P P     P +     FCKT
Sbjct: 98  MCQVHNVTLHADKDTDEIYAQMSLQPVNS------EKDIFPIPDFGLKPSKHPSEFFCKT 151

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S QPPTQEL  +DLH   + FRHI+RGQP+RH
Sbjct: 152 LTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRH 211

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWSVFVS+KRL AGDA +F+R E  +L +GVRRA RQQ ++PSSV+S+ SMH+GVL
Sbjct: 212 LLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVL 271

Query: 275 ATAWHAVSTGTMFTVYYKPR-----TSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGE 328
           A A HA +  + FT++Y PR       PSEF++P  +Y +S+     S+GMRF M FE E
Sbjct: 272 AAAAHAAANRSPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETE 331

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           E+ ++R+ GTIVGI D DP  W  SKWR L+V WDE+    +  RVS W+IE
Sbjct: 332 ESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 383


>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1164

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/354 (53%), Positives = 248/354 (70%), Gaps = 2/354 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPL+++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 21  INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  D +A+          R     FCKTLTASDTSTH
Sbjct: 80  HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R    +L +G+RRA RQQ  + SSVISS SMH+GVLA A HA + 
Sbjct: 200 VSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR +P+EF+VP  +Y +++    S+GMRF+M FE EE   +R+ GT+ GI 
Sbjct: 260 NSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGIS 319

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           D DP RW++S+WR L++ WDE++   RP RVS+W IEP L P  +   P  RP+
Sbjct: 320 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPR 373


>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
          Length = 890

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 239/347 (68%), Gaps = 18/347 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV +P+ G  VYYF QGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 38  VINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQ 97

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKT 154
           V NV L A+ D+DE++AQ++L P        V  E    P P F +          FCKT
Sbjct: 98  VHNVTLHADKDSDEIYAQMSLQP--------VHSERDVFPVPDFGMLRGSKHPTEFFCKT 149

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S QPPTQEL  +DLH N W FRHI+RGQP+RH
Sbjct: 150 LTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRH 209

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GVL
Sbjct: 210 LLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVL 269

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQ 333
           A A HA +  T F ++Y PR  P+EF++P  +Y ++I  +  S+GMRF M FE E++ ++
Sbjct: 270 AAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKR 329

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           R+ GTIVGI D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 330 RYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376


>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
           Full=Auxin-responsive protein IAA21/IAA23/IAA25;
           AltName: Full=Protein BIPOSTO; AltName: Full=Protein
           NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
           TRANSPORT INHIBITOR RESPONSE 5
 gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
 gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
 gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1164

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/366 (52%), Positives = 252/366 (68%), Gaps = 5/366 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPL+++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 21  INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  D +A+          R     FCKTLTASDTSTH
Sbjct: 80  HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R    +L +G+RRA RQQ  + SSVISS SMH+GVLA A HA + 
Sbjct: 200 VSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR +P+EF+VP  +Y +++    S+GMRF+M FE EE   +R+ GT+ GI 
Sbjct: 260 NSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGIS 319

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D DP RW++S+WR L++ WDE++   RP RVS+W IEP L P  +   P     RPR + 
Sbjct: 320 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPF---FRPRFSG 376

Query: 404 LPSSPD 409
            P  PD
Sbjct: 377 QPGMPD 382


>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
          Length = 605

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 195/403 (48%), Positives = 254/403 (63%), Gaps = 22/403 (5%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V YFPQGH+EQ         D    +Y LP  + CR+++V+
Sbjct: 52  ELWHACAGPLISLPKRGSLVLYFPQGHLEQA-------PDFSAAIYGLPPHVFCRILDVK 104

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEK--------EPPPPPPPRFHV-HSFCKTLTAS 158
           L AE  TDEV+AQV+LLPES   E  V +        E       R +  H FCKTLTAS
Sbjct: 105 LHAETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPHMFCKTLTAS 164

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD ++  P+QEL A+DLHG EWRFRHI+RGQPRRHLL +
Sbjct: 165 DTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 224

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA + +G    S   + +M+    A   
Sbjct: 225 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNNFAEVV 284

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HA+ST + F +YY P+ S S FI+P  ++++++   + IGMRFK R E E+A E+R  G 
Sbjct: 285 HAISTNSAFNIYYNPKASWSNFIIPAPKFLKTVDYPFCIGMRFKARVESEDASERRSPGI 344

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDET-STIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           I GI D DP RW  SKWRCL VRWD+T +     +R+S W+IEP+ +  +  S     PK
Sbjct: 345 ITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEPSGSISSSGSFITTGPK 404

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           R R       PD  V     S     D   +  F RVLQGQE 
Sbjct: 405 RSRIGFSSGKPDIPV-----SGSGATDFEESLRFQRVLQGQEI 442


>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
          Length = 850

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 239/347 (68%), Gaps = 18/347 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV +P+ G  VYYF QGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 39  VINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQ 98

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKT 154
           V NV L A+ D+DE++AQ++L P        V  E    P P F +          FCKT
Sbjct: 99  VHNVTLHADKDSDEIYAQMSLQP--------VHSERDVFPVPDFGMLRGSKHPTEFFCKT 150

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD S QPPTQEL  +DLH N W FRHI+RGQP+RH
Sbjct: 151 LTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRH 210

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GVL
Sbjct: 211 LLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVL 270

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQ 333
           A A HA +  T F ++Y PR  P+EF++P  +Y ++I  +  S+GMRF M FE E++ ++
Sbjct: 271 AAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKR 330

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           R+ GTIVGI D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 331 RYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 377


>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 731

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 195/411 (47%), Positives = 260/411 (63%), Gaps = 18/411 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH++ +            P   +P  + CRV
Sbjct: 64  AVCLELWHACAGPVAPMPRKGSVVVYLPQGHLDHL--GDAPAHAAASPAAAVPPHVFCRV 121

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQ--------DENAVEKEPPPPPPPRFHV--HSFCK 153
           ++V L A+  TDEV+AQ++LLPE+ +         ++    E       RF    H FCK
Sbjct: 122 VDVTLHADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRFARMPHMFCK 181

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFS  RR A++C P LD ++Q P+QEL AKDLHG EW+FRHI+RGQPRR
Sbjct: 182 TLTASDTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRGQPRR 241

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +       + S   +LG 
Sbjct: 242 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGT 301

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           LA   HAVST +MF ++Y PR S SEFIVPY ++ +SI   +S+G RFKMR+E E+A E+
Sbjct: 302 LANVTHAVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAER 361

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R+TG I G  DADP RWR SKW+CL VRWD+     RP R+S W+IE   A    + L  
Sbjct: 362 RYTGIITGTVDADP-RWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIELTSAASG-SHLAA 419

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
           P  KR +  +  ++P+ +V    G      D + +    +VLQGQE    R
Sbjct: 420 PTSKRMKPYLPHANPEYTVPYGGGRP----DFAESAQLRKVLQGQELLGYR 466


>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 903

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 187/348 (53%), Positives = 239/348 (68%), Gaps = 19/348 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV +P+ G  VYYF QGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 50  VINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQ 109

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV---------HSFCK 153
           V NV L A+ D+DE++AQ++L P        V  E    P P F +           FCK
Sbjct: 110 VHNVTLHADKDSDEIYAQMSLQP--------VHSERDVFPVPDFGMLRGGSKHPTEFFCK 161

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRHI+RGQP+R
Sbjct: 162 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKR 221

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GV
Sbjct: 222 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 281

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPE 332
           LA A HA +  T F ++Y PR  P+EF++P  +Y ++I  +  S+GMRF M FE E++ +
Sbjct: 282 LAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK 341

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           +R+ GTIVGI D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 342 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 389


>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
          Length = 901

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 187/347 (53%), Positives = 239/347 (68%), Gaps = 18/347 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV +P+ G  VYYF QGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 47  VINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQ 106

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKT 154
           V NV L A+ D+DE++AQ++L P        V  E    P P F +          FCKT
Sbjct: 107 VHNVTLHADKDSDEIYAQMSLQP--------VHSERDVFPVPDFGLLRGSKHPTEFFCKT 158

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRHI+RGQP+RH
Sbjct: 159 LTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRH 218

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GVL
Sbjct: 219 LLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVL 278

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQ 333
           A A HA +  T F ++Y PR  P+EF++P  +Y ++I  +  S+GMRF M FE E++ ++
Sbjct: 279 AAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKR 338

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           R+ GTIVGI D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 339 RYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 385


>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
 gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
          Length = 1055

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 190/367 (51%), Positives = 256/367 (69%), Gaps = 5/367 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS ++  D  +P Y  LPSK++C+
Sbjct: 20  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN-IPGYPSLPSKLICK 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           ++++ L A+ +TDEV+AQ+TL P +  D +A+          +     FCKTLTASDTST
Sbjct: 79  LLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD + QPP QEL AKDLH   W+FRHI+RGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL+AGD+ +F+R E  +L +G+RRA R Q  + SSV+SS SMH+G+LA A HA +
Sbjct: 199 FVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE E++  +R+ GTI GI
Sbjct: 259 NSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGI 318

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D DP RW++S WR L+V WDE++   R  RVS+W+IEP   P  +   P  RPK P+  
Sbjct: 319 GDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPKLPKQ- 377

Query: 403 MLPSSPD 409
             P  PD
Sbjct: 378 --PGMPD 382


>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101205542 [Cucumis sativus]
          Length = 1107

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 197/372 (52%), Positives = 255/372 (68%), Gaps = 11/372 (2%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI-LCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+ +Y         ++ ++
Sbjct: 30  ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVTIYLYHYYFAFLKLCSL 89

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVHSFCKTLTASDTST 162
            L A+P+TDEV+AQ+TLLP  + D++A+ +         P P F    FCKTLTASDTST
Sbjct: 90  YLXADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEF----FCKTLTASDTST 145

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD S QPP QEL AKDLH N W FRHI+RGQP+RHLL +GWS+
Sbjct: 146 HGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSL 205

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS KRL+AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +
Sbjct: 206 FVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 265

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAPEQRFTGTIVG 341
             + FTV+Y PR SPSEF++P  +Y +++  N  S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 266 NNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITG 325

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS 401
           I D DP RW+ S+WR L+V WDE++   R  RVS+W+IEP +AP  +   P  R KRPR 
Sbjct: 326 ISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPFLRSKRPRQ 385

Query: 402 NMLPSSPDSSVL 413
             +P   DSS L
Sbjct: 386 PGMPDD-DSSDL 396


>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 955

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 188/350 (53%), Positives = 244/350 (69%), Gaps = 9/350 (2%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T +  + ++P Y
Sbjct: 36  GAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNY 89

Query: 94  -DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFC 152
             LPS++LC+V N+ + A+ DTDEV+AQ+TL P +++ +    +        +     FC
Sbjct: 90  PSLPSQLLCQVHNITMHADKDTDEVYAQMTLQPVNSETDVFPIQSLGSYAKSKHPAEYFC 149

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           K LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W FRHI+RGQP+
Sbjct: 150 KNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPK 209

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWS+FV +KRL AGD+ +F+R E  +L VGVRRA  QQ  + SSV+S+ SMH+G
Sbjct: 210 RHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIG 269

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
           VLA A HA S+G+ FT+YY PRTSPS F+VP  +Y ++I    S+GMR  M  E EE+ +
Sbjct: 270 VLAAAAHAASSGSSFTIYYNPRTSPSPFVVPMTRYNKAIYIQQSVGMRIAMMSETEESGK 329

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWD--ETSTIPRPERVSLWKIE 380
           +R TGTIVG+ D+DP RW +SKWR L+V WD  E     RPERVS+W IE
Sbjct: 330 RRHTGTIVGVSDSDPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIE 379


>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
          Length = 1100

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 189/354 (53%), Positives = 247/354 (69%), Gaps = 2/354 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPL+++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 21  INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  D +A+          R     FCKTLTASDTSTH
Sbjct: 80  QNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R    +L +G+RRA RQQ  + SSVISS SMH+GVLA A HA + 
Sbjct: 200 VSNKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR +P+EF+VP  +Y +++    S+GMRF+M FE EE   +R+ GT+ GI 
Sbjct: 260 NSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGIS 319

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           D DP RW+ S+WR L++ WDE++   RP RVS+W IEP L P  +   P  RP+
Sbjct: 320 DLDPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPR 373


>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1083

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 190/365 (52%), Positives = 251/365 (68%), Gaps = 19/365 (5%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW+ACAGPLV +P  G  V YFPQGH EQV AS  + AD Q+P Y +LPSK++C + +V
Sbjct: 23  ELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHSV 82

Query: 107 QLKAEPDTDEVFAQVTLLPESN----------QDENAVEKEPPPPPPPRFHVHSFCKTLT 156
            ++++P+TDEV+A++TL P SN            E A+++  P           FCKTLT
Sbjct: 83  TMQSDPETDEVYARMTLQPVSNVTQCDKEILLASELALKQNKP-------QTEFFCKTLT 135

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSV RR A+   P LD S QPP QEL A+DLH   W FRHIFRGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLL 195

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWS+F+S KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+SS SMH+GVLA 
Sbjct: 196 TTGWSLFISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAA 255

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAPEQRF 335
           A HA +  + FT++Y PR SPSEF++P+ +Y +++  N  S+GMRF+M FE EE+  +R+
Sbjct: 256 AAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRY 315

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
            GTI GI D DP RW++S+WR ++V WDE +   R  RVSLW IEP +AP  +   P+  
Sbjct: 316 MGTITGISDLDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIAPFFIYPTPLFT 375

Query: 396 PKRPR 400
            KR R
Sbjct: 376 AKRAR 380


>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 411

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 185/370 (50%), Positives = 251/370 (67%), Gaps = 19/370 (5%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKIL 100
           E  + +ELWHACAGPLV++P  G +V YFPQGH EQV  ST + AD  +P Y +L   ++
Sbjct: 32  EKRINSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLRPHLI 91

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDEN-------AVEKEPPPPPPPRFHVHSFCK 153
           C + NV L A+ +TD+V+AQ+ L+P  + ++         V+ + P           FCK
Sbjct: 92  CTLENVTLHADLETDDVYAQMVLIPTQDPEKETMLLPDVVVQNKQP--------TEYFCK 143

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR-GQPR 212
           TLTASDTSTHGGFS+ RR A++  P LD ++QPP QEL A+DLH  +W FRHI+R GQPR
Sbjct: 144 TLTASDTSTHGGFSIPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPR 203

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWS+F+S+KRL AGDA +F+R + G+L +G+RRA R Q  +PSSV+SS SMH+G
Sbjct: 204 RHLLTTGWSIFISAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIG 263

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAP 331
           +LA A HA  T + FT++Y PR SPSEF++P  +Y +++     ++GMRF+M FE EE+ 
Sbjct: 264 ILAAASHAAQTSSRFTIFYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEEST 323

Query: 332 EQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
            +R+ GT+ GI D DP RW +S WR LKV WDE++   R  RVSLW+IEP   P  +   
Sbjct: 324 VRRYMGTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLICPP 383

Query: 392 PMP-RPKRPR 400
           P+  R KR R
Sbjct: 384 PIVLRSKRAR 393


>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 970

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 189/363 (52%), Positives = 255/363 (70%), Gaps = 2/363 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHAC+GPLV +P  G  V YFPQGH EQV AS ++  D  +P Y  LPSK++C+
Sbjct: 20  AINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVDI-IPNYPSLPSKLICK 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           ++++ L A+ +TDEV+AQ+TL P +  D +A+          +  V  FCKTLTASDTST
Sbjct: 79  LLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPVEFFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD + QPP QEL AKDLH   W+FRHIFRGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL+AGD+ +F+R E  +L +G+RRA R Q  + SSV+SS SMH+G+LA A HA +
Sbjct: 199 FVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE E++  +R+ GTI GI
Sbjct: 259 NSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGI 318

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D DP RW++S WR L+V WDE++   R  RVS+W+IEP   P  +   P  RPK P+  
Sbjct: 319 GDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPKLPKQP 378

Query: 403 MLP 405
            +P
Sbjct: 379 GMP 381


>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
 gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
          Length = 1055

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 189/367 (51%), Positives = 255/367 (69%), Gaps = 5/367 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS ++  D  +P Y  LPSK++C+
Sbjct: 20  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN-IPGYPSLPSKLICK 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           ++++ L A+ +TDEV+ Q+TL P +  D +A+          +     FCKTLTASDTST
Sbjct: 79  LLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD + QPP QEL AKDLH   W+FRHI+RGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL+AGD+ +F+R E  +L +G+RRA R Q  + SSV+SS SMH+G+LA A HA +
Sbjct: 199 FVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE E++  +R+ GTI GI
Sbjct: 259 NSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGI 318

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D DP RW++S WR L+V WDE++   R  RVS+W+IEP   P  +   P  RPK P+  
Sbjct: 319 GDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPKLPKQ- 377

Query: 403 MLPSSPD 409
             P  PD
Sbjct: 378 --PGMPD 382


>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
          Length = 1020

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 188/362 (51%), Positives = 250/362 (69%), Gaps = 2/362 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + ++LWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 20  INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDF-IPNYPNLPSKLICLL 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            +V L A+ +TDEV+AQ+TL P +  D  A+          R     FCKTLTASDTSTH
Sbjct: 79  HSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTH 138

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD S QPP QE+ AKDLH   W FRHI+RGQP+RHLL +GWSVF
Sbjct: 139 GGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVF 198

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL+AGD+ +F+R E  +L + +RRA RQ   + SSVISS SMH+G+LA A HA + 
Sbjct: 199 VSTKRLIAGDSVLFVRDEKSQLTLVIRRANRQTPTLSSSVISSDSMHIGILAAAAHANAN 258

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT+++ PR SPSEF+VP  +Y +++    S+GMRF+M FE E+   +R+ GT+ G+ 
Sbjct: 259 NSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGVS 318

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D DP RW+ S+WR L+V WDE++   RP RVS+W+IEP + P  +   P  RPK PR   
Sbjct: 319 DLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSVWEIEPVITPFYICPPPFFRPKYPRQPG 378

Query: 404 LP 405
           +P
Sbjct: 379 MP 380


>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
 gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
          Length = 961

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 206/409 (50%), Positives = 270/409 (66%), Gaps = 28/409 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQV--ADQQMPVY-DLPSKIL 100
           A+ T LW  CAGPLVT+P  G  V YFPQGH EQV AST Q    + ++P Y +LP+ ++
Sbjct: 11  AMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPNLPAHLI 70

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP----PRFHVHSFCKTLT 156
           C + N+ L A+PDTDEV+AQ+TL P  N      +KEP   P     P+    SFCKTLT
Sbjct: 71  CHLHNITLHADPDTDEVYAQMTLQPVQN------DKEPFLTPDLGIQPKQQTLSFCKTLT 124

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFS+ RR A++  PPLD ++QPP QEL AKDLH  +W FRHI+RGQPRRHLL
Sbjct: 125 ASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLL 184

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFVS+KRL AGD  +F+R EN  L +G+RRA RQQ NVPSS++SS SM +GVLA 
Sbjct: 185 TTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAA 244

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKN-NYSIGMRFKMRFEGEEAPEQRF 335
           A HA +T + FT++Y PR S SEF+VP+ ++ ++  +   ++GMRF+M  E E++  +R+
Sbjct: 245 AAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRY 304

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP--PALNSLPM 393
            GTI GI D D  RW +S WR LKV WDE++   R +RVSLW+IEP  AP  P  +SL +
Sbjct: 305 MGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLTAPYFPCTSSLFL 364

Query: 394 PRPKRPRSNMLPS----------SPDSSVLTREGSSKLNVDPSSATGFS 432
              KR R + + S          +  S V  R    K+++   +A G S
Sbjct: 365 --RKRTRLDGMLSFCAGELDELDAIRSQVWARAEDGKMDIRALNAAGLS 411


>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
          Length = 712

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 193/402 (48%), Positives = 256/402 (63%), Gaps = 15/402 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E +                +P  + CRV
Sbjct: 34  AVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHL----GDAPAAAAAAAAVPPHVFCRV 89

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP---PPRFHV--HSFCKTLTAS 158
           ++V L A+  TDEV+AQ++L+PE  +     +            RF    H FCKTLTAS
Sbjct: 90  VDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTAS 149

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EWRFRHI+RGQPRRHLL +
Sbjct: 150 DTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTT 209

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + +       + +   +LG LA   
Sbjct: 210 GWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVA 269

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HAV+T ++F +YY PR S SEFIVPY ++M+S+   +S+G+RFKMR+E E+A E+R+TG 
Sbjct: 270 HAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASERRYTGI 329

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           I G  D DP  W  SKW+CL VRWD+ +   RP RVS W+IE   +  + + L  P  KR
Sbjct: 330 ITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE-LTSSVSGSHLSTPHSKR 387

Query: 399 PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            +   LP      ++ R G      D + +  F +VLQGQE 
Sbjct: 388 LKP-CLPHVNPEYMVPRGGGCP---DFAESAQFHKVLQGQEL 425


>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
          Length = 1085

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 189/358 (52%), Positives = 249/358 (69%), Gaps = 5/358 (1%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW+ACAGPLV +P  G  V YFPQGH EQV AS  + AD ++P Y +L SK++C + +V
Sbjct: 24  ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83

Query: 107 QLKAEPDTDEVFAQVTLLPESNQ---DENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            + A+PDTDEV+A++TL P SN    D+  +          R     FCKTLTASDTSTH
Sbjct: 84  TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDTSTH 143

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A+   P LD S QPP QEL A+DLH   W FRHI+RGQP+RHLL +GWS+F
Sbjct: 144 GGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLF 203

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 204 VSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAAN 263

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FTV+Y PR SPSEF++P+ +Y +++  N  S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 264 NSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITGI 323

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
            D DP RW++S+WR ++V WDE +   R  RVSLW++EP +AP  +   P+   KRPR
Sbjct: 324 SDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPLFTAKRPR 381


>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
          Length = 1086

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 189/358 (52%), Positives = 249/358 (69%), Gaps = 5/358 (1%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW+ACAGPLV +P  G  V YFPQGH EQV AS  + AD ++P Y +L SK++C + +V
Sbjct: 24  ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83

Query: 107 QLKAEPDTDEVFAQVTLLPESNQ---DENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            + A+PDTDEV+A++TL P SN    D+  +          R     FCKTLTASDTSTH
Sbjct: 84  TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDTSTH 143

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A+   P LD S QPP QEL A+DLH   W FRHI+RGQP+RHLL +GWS+F
Sbjct: 144 GGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLF 203

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 204 VSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAAN 263

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FTV+Y PR SPSEF++P+ +Y +++  N  S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 264 NSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITGI 323

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
            D DP RW++S+WR ++V WDE +   R  RVSLW++EP +AP  +   P+   KRPR
Sbjct: 324 SDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPLFTAKRPR 381


>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
          Length = 1123

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 184/342 (53%), Positives = 242/342 (70%), Gaps = 2/342 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 6   MNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDG-IPSYPNLPSKLICML 64

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+ +TDEV+AQ+TL P +  D+ A+          R     FCKTLTASDTSTH
Sbjct: 65  HNVTLHADTETDEVYAQMTLQPVNKYDQEALLLSEMGLKQNRQPAEFFCKTLTASDTSTH 124

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD + QPP QEL A+DLH   W FRHI+RGQP+RHLL +GWSVF
Sbjct: 125 GGFSVPRRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLTTGWSVF 184

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           +SSKRL AGD+ +F+R E  +L +G++R  RQQ  + SSVISS SMH+G+LA A HA + 
Sbjct: 185 ISSKRLCAGDSVLFIRDEKSQLLLGIKRTNRQQPALSSSVISSDSMHIGILAAAAHAAAN 244

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE EE+  +R+ GTI G+ 
Sbjct: 245 NSPFTIFYNPRASPSEFVIPLAKYNKAMYAQVSLGMRFRMMFETEESGVRRYMGTITGVS 304

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           D DP RW+ S+WR L+V WDE++   RP RVS+W IEP + P
Sbjct: 305 DLDPIRWKSSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTP 346


>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
 gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
          Length = 747

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/408 (48%), Positives = 262/408 (64%), Gaps = 24/408 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++  ELWHACAGPL+++P++G  V Y PQGH+E +    +   +       LP  + CRV
Sbjct: 51  SVCMELWHACAGPLISLPKKGSAVVYLPQGHLEHLSEYPSIACN-------LPPHVFCRV 103

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDEN---------AVEKEPPPPPPPRFHVHSFCKT 154
           ++V+L+A+  TDEV+AQV+L+P++ Q E           +E+E           H FCKT
Sbjct: 104 VDVKLQADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITPHMFCKT 163

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C  PLD  +Q P+QEL AKDLHG EW+FRHI+RGQPRRH
Sbjct: 164 LTASDTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRH 223

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV- 273
           LL +GWS FV+ K+LV+GDA +FLR  +GELR+GVRRA   Q    SS ++  S  L V 
Sbjct: 224 LLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAA--QAKTCSSYLAPCSKPLNVS 281

Query: 274 -LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
            +  A + +S+   F + Y PR S S+FIVPY ++ +++ + +S GMRFKMR E E+A E
Sbjct: 282 GIVDAVNVISSRNAFNICYNPRDSSSDFIVPYHKFSKTLAHPFSAGMRFKMRVETEDAAE 341

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           QRFTG +VG+ + DP RW  SKWRCL VRWD+   + R  RVS W+IEP+ + P  +SL 
Sbjct: 342 QRFTGLVVGVSNVDPVRWPGSKWRCLLVRWDDLD-VSRHNRVSPWEIEPSGSAPVPSSLV 400

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           MP  KR R    P S     + REG +    D    + F +VLQGQE 
Sbjct: 401 MPSAKRTRVG-FPISKADFPIPREGIAV--SDFGEPSRFQKVLQGQEI 445


>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
 gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
           protein 2; AltName: Full=OsETTIN2
 gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
 gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
          Length = 718

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 194/412 (47%), Positives = 261/412 (63%), Gaps = 23/412 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E + A     A    P   +P  + CRV
Sbjct: 35  AVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGA-----APGSGPGAAVPPHVFCRV 89

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAV-----------EKEPPPPPPPRFHVHSFC 152
           ++V L A+  TDEV+AQV+L+ ++ + E  +           E E     P R   H FC
Sbjct: 90  VDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARI-PHMFC 148

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++C PPLD S Q P QEL AKDLHG EWRFRHI+RGQPR
Sbjct: 149 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPR 208

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWS F++ K+LV+GDA +FLRGE+GELR+GVRRA + +   P   + +   +  
Sbjct: 209 RHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTS 268

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
            L+   HAV+  ++F +YY PR S SEFI+PY ++M S    +S+GMRFK+R+E E+A E
Sbjct: 269 SLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASE 328

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +R TG I+G  +ADP  W  SKW+CL V+WD+     RP  VS W+IE +    + + L 
Sbjct: 329 RRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIELS-GSVSGSHLS 386

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
            P  KR +S     +PD  ++   GS  ++ D + +  F +VLQGQE   L+
Sbjct: 387 TPHSKRLKSCFPQVNPD--IVLPNGS--VSSDFAESARFHKVLQGQELLGLK 434


>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
           [Cucumis sativus]
          Length = 730

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/406 (46%), Positives = 262/406 (64%), Gaps = 24/406 (5%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV--YDLPSKILCR 102
           +  ELWHACAGPL ++P++G  V Y PQGH EQ+         Q+ P   YDLP  ILCR
Sbjct: 43  ICLELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILCR 93

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKT 154
           VI+VQL AE  +DEV+AQV+L PE+ Q E+ +++E                   H FCKT
Sbjct: 94  VIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKT 153

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD ++Q P+QEL AKDL G +W+FRHI+RGQPRRH
Sbjct: 154 LTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRH 213

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+ KRLV+GDA +FLRG +GELR+G+RRA + +     S I S  ++   +
Sbjct: 214 LLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSI 273

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
               +AVS+ + F+V Y PR + S+F++P+ ++++SI +++S+G+RF++ FE ++  ++R
Sbjct: 274 MDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRR 333

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            TG I G+ D DP RW  S+WR L VRWD+  T  R  RVS W+IEP+ +     +L  P
Sbjct: 334 HTGHITGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTNLVPP 392

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
             KR R  +  +  +  V    G+S    D   +  F +VLQGQE 
Sbjct: 393 GLKRTRIGLSSTKLEFPVPNGIGAS----DFGESLRFQKVLQGQEI 434


>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
          Length = 731

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/406 (46%), Positives = 262/406 (64%), Gaps = 24/406 (5%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV--YDLPSKILCR 102
           +  ELWHACAGPL ++P++G  V Y PQGH EQ+         Q+ P   YDLP  ILCR
Sbjct: 43  ICLELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILCR 93

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKT 154
           VI+VQL AE  +DEV+AQV+L PE+ Q E+ +++E                   H FCKT
Sbjct: 94  VIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKT 153

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD ++Q P+QEL AKDL G +W+FRHI+RGQPRRH
Sbjct: 154 LTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRH 213

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+ KRLV+GDA +FLRG +GELR+G+RRA + +     S I S  ++   +
Sbjct: 214 LLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSI 273

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
               +AVS+ + F+V Y PR + S+F++P+ ++++SI +++S+G+RF++ FE ++  ++R
Sbjct: 274 MDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRR 333

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            TG I G+ D DP RW  S+WR L VRWD+  T  R  RVS W+IEP+ +     +L  P
Sbjct: 334 HTGHITGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTNLVPP 392

Query: 395 RPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
             KR R  +  +  +  V    G+S    D   +  F +VLQGQE 
Sbjct: 393 GLKRTRIGLSSTKLEFPVPNGIGAS----DFGESLRFQKVLQGQEI 434


>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
 gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1165

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 193/367 (52%), Positives = 252/367 (68%), Gaps = 6/367 (1%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPL+++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 21  INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  D +A+          R     FCKTLTASDTSTH
Sbjct: 80  HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R    +L +G+RRA RQQ  + SSVISS SMH+GVLA A HA + 
Sbjct: 200 VSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259

Query: 284 GTMFTVYYKPR-TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FT++Y PR  +P+EF+VP  +Y +++    S+GMRF+M FE EE   +R+ GT+ GI
Sbjct: 260 NSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 319

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            D DP RW++S+WR L++ WDE++   RP RVS+W IEP L P  +   P     RPR +
Sbjct: 320 SDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPF---FRPRFS 376

Query: 403 MLPSSPD 409
             P  PD
Sbjct: 377 GQPGMPD 383


>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
 gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1150

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 189/355 (53%), Positives = 248/355 (69%), Gaps = 3/355 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPL+++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 21  INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  D +A+          R     FCKTLTASDTSTH
Sbjct: 80  HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R    +L +G+RRA RQQ  + SSVISS SMH+GVLA A HA + 
Sbjct: 200 VSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259

Query: 284 GTMFTVYYKPR-TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FT++Y PR  +P+EF+VP  +Y +++    S+GMRF+M FE EE   +R+ GT+ GI
Sbjct: 260 NSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 319

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
            D DP RW++S+WR L++ WDE++   RP RVS+W IEP L P  +   P  RP+
Sbjct: 320 SDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPR 374


>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
 gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
          Length = 1053

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 186/362 (51%), Positives = 253/362 (69%), Gaps = 2/362 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPLV++P  G  V YFPQGH EQV AS ++  D  +P Y  LPSK++C++
Sbjct: 21  INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDT-VPSYPSLPSKLICKL 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +++ L A+ +TDEV+AQ+ L P +  D +A+          +     FCKTLTASDTSTH
Sbjct: 80  LSLTLHADSETDEVYAQMMLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD + QPP QEL AKDLH   W+FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL+AGD+ +F+R E  +L +G+RRA R Q  + SSV+SS SMH+G+LA A HA + 
Sbjct: 200 VSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSSDSMHIGILAAAAHAAAN 259

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE E++  +R+ GTI GI 
Sbjct: 260 SSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIG 319

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D DP RW++S WR L+V WDE++   R  RVS+W+IEP   P  +   P  RPK P+   
Sbjct: 320 DLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPKLPKQAG 379

Query: 404 LP 405
           +P
Sbjct: 380 MP 381


>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1168

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 189/355 (53%), Positives = 248/355 (69%), Gaps = 3/355 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPL+++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 21  INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  D +A+          R     FCKTLTASDTSTH
Sbjct: 80  HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R    +L +G+RRA RQQ  + SSVISS SMH+GVLA A HA + 
Sbjct: 200 VSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259

Query: 284 GTMFTVYYKPR-TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FT++Y PR  +P+EF+VP  +Y +++    S+GMRF+M FE EE   +R+ GT+ GI
Sbjct: 260 NSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 319

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
            D DP RW++S+WR L++ WDE++   RP RVS+W IEP L P  +   P  RP+
Sbjct: 320 SDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPR 374


>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1110

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 203/384 (52%), Positives = 264/384 (68%), Gaps = 17/384 (4%)

Query: 39  GDP----EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY- 93
           GDP    + ++  ELW ACAGPLV +P  G  V YFPQGH EQV AS N+    Q+P Y 
Sbjct: 12  GDPCEEKKKSINPELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYP 71

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVH 149
           +LPSK+LC + N+ L A+P+TDEV+AQ+TL P  + D++A+ +         P P F   
Sbjct: 72  NLPSKLLCLLHNLTLLADPETDEVYAQITLQPVPSFDKDALLRSDLALKSSKPQPDF--- 128

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCK LTASDTSTHGGFSV RR AD+  PPLD S QPP QEL A+DLH   W FRHI+RG
Sbjct: 129 -FCKQLTASDTSTHGGFSVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRG 187

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QP+RHLL +GWS+FVS KRL+AGD+ +F+R E   L +G+RRA RQ  N+ SSV+SS SM
Sbjct: 188 QPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSM 247

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNY-SIGMRFKMRFEGE 328
           H+G+LA A HA +  + FTV+Y PRTSPSEF++P  +Y +S+ ++  S+GMRF+M FE E
Sbjct: 248 HIGILAAAAHAAANNSPFTVFYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETE 307

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           ++  +R+ GTI GI D DP RW++S+WR L+V WDE++   +  RVSLW+IEP  AP  +
Sbjct: 308 DSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFFI 367

Query: 389 NSLPMPRPKRPRSNMLPSSPDSSV 412
              P  R KRPR    P  PD  +
Sbjct: 368 CPPPFFRSKRPRQ---PGMPDDEL 388


>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
 gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
          Length = 958

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 206/409 (50%), Positives = 268/409 (65%), Gaps = 28/409 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQV--ADQQMPVY-DLPSKIL 100
           A+ T LW  CAGPLVT+P  G  V YFPQGH EQV AST Q    + ++P Y  LP+ ++
Sbjct: 11  AMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPSLPAHLI 70

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP----PRFHVHSFCKTLT 156
           C + N+ L A+PDTDEV+AQ+TL P  N      +KEP   P     P+    SFCKTLT
Sbjct: 71  CHLHNITLHADPDTDEVYAQMTLQPVQN------DKEPFLTPDLGIQPKQQTLSFCKTLT 124

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFS+ RR A++  PPLD ++QPP QEL AKDLH  +W FRHI+RGQPRRHLL
Sbjct: 125 ASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLL 184

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFVS+KRL AGD  +F+R EN  L +G+RRA RQQ NVPSS++SS SM +GVLA 
Sbjct: 185 TTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAA 244

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKN-NYSIGMRFKMRFEGEEAPEQRF 335
           A HA +T + FT++Y PR S SEF+VP+ ++ ++  +   ++GMRF+M  E E++  +R+
Sbjct: 245 AAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRY 304

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP--PALNSLPM 393
            GTI GI D D  RW +S WR LKV WDE++   R  RVSLW+IEP  AP  P  +SL +
Sbjct: 305 MGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLTAPYFPCTSSLFL 364

Query: 394 PRPKRPRSNMLPS----------SPDSSVLTREGSSKLNVDPSSATGFS 432
              KR R + + S          +  S V  R    K+++   +A G S
Sbjct: 365 --RKRTRLDGMLSFCAGELDELDAIRSQVWARAEDGKMDIRALNAAGLS 411


>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
          Length = 1165

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 189/355 (53%), Positives = 246/355 (69%), Gaps = 3/355 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPL+++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 21  INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDF-IPSYPNLPSKLICML 79

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  D NA+          R     FCKTLTASDTSTH
Sbjct: 80  HNVTLNADPETDEVYAQMTLQPVNKYDRNALLASDMGLKLNRQPNEFFCKTLTASDTSTH 139

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 140 GGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVF 199

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KR  AGD+ +F+R    +L +G+RRA RQQ  + SSVISS SMH+GVLA A HA + 
Sbjct: 200 VSTKRFFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANAN 259

Query: 284 GTMFTVYYKPR-TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
            + FT++Y PR  +P+EF+VP  +Y +++    S+GMRF+M FE EE   +R+ GT+ GI
Sbjct: 260 NSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 319

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
            D DP RW +S+WR L++ WDE++   RP RVS+W IEP L P  +   P  RP+
Sbjct: 320 SDLDPVRWENSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPR 374


>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
          Length = 719

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 192/402 (47%), Positives = 255/402 (63%), Gaps = 15/402 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E +                +P  + CRV
Sbjct: 34  AVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHL----GDAPAAAAAAAAVPPHVFCRV 89

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP---PPRFHV--HSFCKTLTAS 158
           ++V L A+  TDEV+AQ++L+PE  +     +            RF    H FCKTLTAS
Sbjct: 90  VDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTAS 149

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLH  EWRFRHI+RGQPRRHLL +
Sbjct: 150 DTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTT 209

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + +       + +   +LG LA   
Sbjct: 210 GWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVA 269

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HAV+T ++F +YY PR S SEFIVPY ++M+S+   +S+G+RFKMR+E E+A E+R+TG 
Sbjct: 270 HAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGI 329

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           I G  D DP  W  SKW+CL VRWD+ +   RP RVS W+IE   +  + + L  P  KR
Sbjct: 330 ITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE-LTSSVSGSHLSTPHSKR 387

Query: 399 PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            +   LP      ++ R G      D + +  F +VLQGQE 
Sbjct: 388 LKP-CLPHVNPEYMVPRGGGCP---DFAESAQFHKVLQGQEL 425


>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
 gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
           protein 1; AltName: Full=OsETTIN1
 gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
 gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
 gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
          Length = 712

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 192/402 (47%), Positives = 255/402 (63%), Gaps = 15/402 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E +                +P  + CRV
Sbjct: 34  AVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHL----GDAPAAAAAAAAVPPHVFCRV 89

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP---RFHV--HSFCKTLTAS 158
           ++V L A+  TDEV+AQ++L+PE  +     +            RF    H FCKTLTAS
Sbjct: 90  VDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTAS 149

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLH  EWRFRHI+RGQPRRHLL +
Sbjct: 150 DTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTT 209

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + +       + +   +LG LA   
Sbjct: 210 GWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVA 269

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           HAV+T ++F +YY PR S SEFIVPY ++M+S+   +S+G+RFKMR+E E+A E+R+TG 
Sbjct: 270 HAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGI 329

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           I G  D DP  W  SKW+CL VRWD+ +   RP RVS W+IE   +  + + L  P  KR
Sbjct: 330 ITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE-LTSSVSGSHLSTPHSKR 387

Query: 399 PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            +   LP      ++ R G      D + +  F +VLQGQE 
Sbjct: 388 LKP-CLPHVNPEYMVPRGGGCP---DFAESAQFHKVLQGQEL 425


>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1099

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 194/373 (52%), Positives = 255/373 (68%), Gaps = 10/373 (2%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPS 97
           G  +  +  ELW ACAGPL+ +P  G  V YFPQGH EQV AS  +  D Q+P Y +LPS
Sbjct: 19  GGEKKTINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPS 78

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP----PPPPPPRFHVHSFCK 153
           KI C + NV L A+PDTDEV+AQ+TL P  + D +A+ +         P P F    FCK
Sbjct: 79  KIPCLLHNVTLHADPDTDEVYAQMTLQPVPSFDTDALLRSDIFLRSSKPQPEF----FCK 134

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
            LTASDTSTHGGFSV RR A++  PPLD S QPP QEL A+DLH N WRFRHI+RGQP+R
Sbjct: 135 QLTASDTSTHGGFSVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWRFRHIYRGQPKR 194

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS+F+  KRL+AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+GV
Sbjct: 195 HLLTTGWSLFIGGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGV 254

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNY-SIGMRFKMRFEGEEAPE 332
           LA A  AV+  + FTV+Y PR SPSEF++P  +Y +++ +++ S GMRF+M FE E++  
Sbjct: 255 LAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYSKAVYSHHISPGMRFRMMFETEDSGT 314

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +R+ GTI+G+ D D  RW++S WR L+V WDE++   R  RVS+W+IEP   P  +   P
Sbjct: 315 RRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIEPVTTPYFICPPP 374

Query: 393 MPRPKRPRSNMLP 405
             R K PR   +P
Sbjct: 375 FFRSKIPRLLGMP 387


>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
          Length = 714

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 193/407 (47%), Positives = 262/407 (64%), Gaps = 18/407 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E + A+    A   +P +     + CRV
Sbjct: 35  AVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGPAAVAAVPPH-----VFCRV 89

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAV------EKEPPPPPPPRFHVHSFCKTLTA 157
           ++V L A+  TDEV+AQV+L+ ++ + E  +      E E     P R   H FCKTLTA
Sbjct: 90  VDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARI-PHMFCKTLTA 148

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++C PPLD S Q P+QEL AKDLHG EWRFRHI+RGQPRRHLL 
Sbjct: 149 SDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLT 208

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS F++ K+LV+GDA +FLRGE+GELR+GVRRA + +   P   + +       L+  
Sbjct: 209 TGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQISSTSSLSEV 268

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
            HAV+  ++F +YY PR S SEFI+PY ++M S    +S+GMRFK+R+E E+A E+R TG
Sbjct: 269 AHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTG 328

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
            I+G  +ADP  W  SKW+CL V+WD+     RP  VS W+IE +    + + L  P  K
Sbjct: 329 IIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIELS-GSVSGSHLSTPHSK 386

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
           R +S     +PD  ++   GS  ++ D + +  F +VLQGQE   L+
Sbjct: 387 RLKSCFPQVNPD--IVLPNGS--VSSDFAESARFHKVLQGQELLGLK 429


>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
 gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
          Length = 634

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 184/339 (54%), Positives = 228/339 (67%), Gaps = 44/339 (12%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LY ELW ACAGPLV VPR GE+V Y+PQGH+EQVEA  NQ    +MPVY+LPSKI C+VI
Sbjct: 44  LYKELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVYNLPSKIFCKVI 103

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPR-FHVHSFCKTLTASDTSTH 163
           NVQLKAE  TDEVFAQ+TLLPE+ QD  +++++    P PR   + SF K LT+SDTSTH
Sbjct: 104 NVQLKAEAGTDEVFAQITLLPETKQDVLSLKEDGNSLPLPRKADLRSFSKKLTSSDTSTH 163

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSVL+RHA+ECLPP+DMS +PP Q L AKD+HG                         
Sbjct: 164 GGFSVLKRHAEECLPPMDMSGEPPEQMLVAKDMHG------------------------- 198

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
                            ENGELR+G+RRAM+   N  +SVIS+HSM  G+L+ A+HA++T
Sbjct: 199 -----------------ENGELRIGLRRAMKLHSNASTSVISAHSMQHGILSMAFHAITT 241

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           G++FTVYY+P T+P+EFI+P+DQY+ES +  YS+G  F M FE EE  EQR  GTIVG E
Sbjct: 242 GSIFTVYYRPWTNPTEFIIPFDQYVESAELEYSVGTTFGMLFEVEECAEQRSEGTIVGNE 301

Query: 344 DADPQRWRDSKWRCLKVRWDETST-IPRPERVSLWKIEP 381
           D D  RW +S+WR LK +WD TS     P+RVS W I P
Sbjct: 302 DVDHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMIVP 340


>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
          Length = 958

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 190/371 (51%), Positives = 243/371 (65%), Gaps = 36/371 (9%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 29  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIP 82

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y  LP ++LC+V N+ L A+ +TDE++ Q+TL P        +  E    P P    ++
Sbjct: 83  NYPSLPPQLLCQVHNITLHADKETDEIYCQMTLQP--------LHSETDVFPIPTLGAYT 134

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLP-------------PLDMSRQPPTQ 189
                   FCK LTASDTSTHGGFSV RR A++  P             P D S QPP Q
Sbjct: 135 KSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQ 194

Query: 190 ELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV 249
           EL  +DLH N W FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L VGV
Sbjct: 195 ELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGV 254

Query: 250 RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYME 309
           RRA RQQ  + SSV+S+ SMH+GVLA A HA S+G  FT+YY PRTSPS F++P  +Y +
Sbjct: 255 RRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNK 314

Query: 310 SIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIP 369
           +     S+GMRF M FE EE+ ++R TG IVGI D DP RW +SKWR L+V WDE     
Sbjct: 315 ATYLQPSVGMRFAMMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGE 374

Query: 370 RPERVSLWKIE 380
           RPERVS+W IE
Sbjct: 375 RPERVSIWDIE 385


>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
          Length = 202

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 172/203 (84%), Positives = 185/203 (91%), Gaps = 1/203 (0%)

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           AS TSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLHG EWRFRHIFRGQPRRHLL
Sbjct: 1   ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
           QSGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMRQ  N+ SSVISSHSMHLGVLAT
Sbjct: 61  QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           AWHA++T TMFTVYYKPRTS SEFI+PYD+YM+S+KN YSIG RFKMRFEGEEAPEQRFT
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFT 180

Query: 337 GTIVGIEDADPQRWRDSKWRCLK 359
           GTIVG ++ D Q W +S WR LK
Sbjct: 181 GTIVGSDNLD-QLWPESSWRSLK 202


>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1113

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 201/408 (49%), Positives = 267/408 (65%), Gaps = 16/408 (3%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPS 97
           G  + ++  ELW ACAGPL+ +P  G  V YFPQGH EQV AS  +  D Q+P Y +LPS
Sbjct: 19  GGEKKSINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPS 78

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVHSFCK 153
           KI C + NV L A+PDTDEV+AQ+ L P  + D +A+ +         P P F    FCK
Sbjct: 79  KIPCLLHNVTLHADPDTDEVYAQMALRPVPSFDTDALLRSDISLKLSKPQPEF----FCK 134

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
            LTASDTSTHGGFSV RR A++  PPLD S Q P QEL A+DLH N WRFRHI+RG+P+R
Sbjct: 135 QLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPKR 194

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWS+F+S KRL+AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+GV
Sbjct: 195 HLLTTGWSLFISGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGV 254

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNY-SIGMRFKMRFEGEEAPE 332
           LA A  AV+  + FTV+Y PR SPSEF++P  +Y +++ +++ S GM F+M FE E++  
Sbjct: 255 LAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSGT 314

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +R+ GTI+G+ D D  RW++S WR L+V WDE++   R  RVS+W+IEP   P  +   P
Sbjct: 315 RRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPVTTPYFICPPP 374

Query: 393 MPRPKRPRSNMLPSS-PDSSVLTRE-----GSSKLNVDPSSATGFSRV 434
             R KRPR   +P   PD + L +      G      DP +  G S V
Sbjct: 375 FFRSKRPRLLGMPDDEPDFNNLFKSTVPWLGDDMCIKDPQALPGLSLV 422


>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
 gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
          Length = 1047

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 242/343 (70%), Gaps = 2/343 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           ++ +ELWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +L SK++C 
Sbjct: 19  SINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDF-VPSYPNLTSKLICM 77

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + NV L A+ +TDEV+AQ+TL P S  D+ A+          R     FCKTLTASDTST
Sbjct: 78  LHNVTLHADVETDEVYAQMTLQPVSKYDKEALLASDLGQKQSRQPTEFFCKTLTASDTST 137

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGF V RR A++  PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWSV
Sbjct: 138 HGGFFVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KR+  GD+ +F+R E  +L +G+R A RQQ  + SS+ISS SMH+G+LA A HA +
Sbjct: 198 FVSTKRIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLISSDSMHIGILAAAAHAAA 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             + FT++Y P  SPSEF++P+ +Y +++    S+GMRF+M F  EE+  +R+ GTI GI
Sbjct: 258 NNSPFTIFYNPSASPSEFVIPFSKYNKAMYTQGSLGMRFRMMFTTEESGVRRYMGTITGI 317

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            D DP RW++S+WR L+V WDE++   RP RVS+W+IEP + P
Sbjct: 318 SDLDPVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPVVTP 360


>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
 gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
          Length = 954

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 189/360 (52%), Positives = 245/360 (68%), Gaps = 28/360 (7%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 29  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIP 82

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y +LPS++LC+V N+ L A+ DTDEV+AQ+TL P        V  E    P P    ++
Sbjct: 83  NYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQP--------VNSETDVFPIPTLGAYT 134

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 135 KSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 194

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E  +L +GVRRA RQQ  + SS
Sbjct: 195 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSS 254

Query: 263 VISSHSMHLGVLATAWHAVST--GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
           V+S+ SMH+GVLA A HA S+  G  + ++   RTSPS F++P  +Y ++     S+GMR
Sbjct: 255 VLSTDSMHIGVLAAAAHAASSAFGHSWNLH---RTSPSPFVIPVARYNKATYMQPSVGMR 311

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           F M FE EE+ ++R+TGT+VGI D DP RW +SKWR L+V WDE     RPERVS+W IE
Sbjct: 312 FAMMFETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 371


>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
          Length = 836

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 184/342 (53%), Positives = 235/342 (68%), Gaps = 18/342 (5%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQ 107
           LWHACAGPLV +P+ G  VYYF QGH EQV  ST + A  Q+P Y +LPS+++C+V NV 
Sbjct: 43  LWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVT 102

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCKTLTASD 159
           L A+ D+DE++AQ++L P        V  E    P P   +          FCKTLTASD
Sbjct: 103 LHADKDSDEIYAQMSLQP--------VHSERDVLPVPDLGLLRGSKHPSEYFCKTLTASD 154

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRHI+RGQP+RHLL +G
Sbjct: 155 TSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTG 214

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 279
           WS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GVLA A H
Sbjct: 215 WSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAH 274

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           A +  T F +++ PR  P+EF++P  +Y ++I  +  S+GMRF M FE E++ ++R+ GT
Sbjct: 275 ATANRTPFLIFFNPRACPAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGT 334

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           IVGI D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 335 IVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376


>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1096

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 191/376 (50%), Positives = 250/376 (66%), Gaps = 16/376 (4%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + ++LWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 20  INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDF-IPNYPNLPSKLICLL 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            +V L A+ +TDEV+AQ+TL P +  D  A+          R     FCKTLTASDTSTH
Sbjct: 79  HSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTH 138

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD S QPP QE+ AKDLH   W FRHI+RGQP+RHLL +GWSVF
Sbjct: 139 GGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVF 198

Query: 224 VSSKRLVAGDAFIFLR--------------GENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           VS+KRL AGD+ +F+R               E  +L +G+RRA RQ   + SSVISS SM
Sbjct: 199 VSTKRLFAGDSVLFVRIGLSSSHKGTWVCRDEKSQLMLGIRRANRQTPTLSSSVISSDSM 258

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
           H+G+LA A HA +  + FT+++ PR SPSEFIVP  +Y +++    S+GMRF+M FE E+
Sbjct: 259 HIGILAAAAHANANSSPFTIFFNPRASPSEFIVPLAKYNKALYAQVSLGMRFRMMFETED 318

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
              +R+ GT+ GI D DP RW+ S+WR L+V WDE++   RP RVS+W+IEP + P  + 
Sbjct: 319 CGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYIC 378

Query: 390 SLPMPRPKRPRSNMLP 405
             P  RPK PR   +P
Sbjct: 379 PPPFFRPKYPRQPGMP 394


>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 1104

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 195/375 (52%), Positives = 259/375 (69%), Gaps = 13/375 (3%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           ++  ELWHACAGPLV +P  G  V YFPQGH EQV AS N+    Q+P Y +LPSK+LC 
Sbjct: 6   SIKAELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKLLCL 65

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVHSFCKTLTAS 158
           +  + L A+P TD+V+AQ+TL P  + D++A+ +         PPP F    FCK LTAS
Sbjct: 66  LHTLTLHADPQTDQVYAQITLQPLPSFDKDALLRSDLALESTKPPPDF----FCKQLTAS 121

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++  PPLD S QPP QEL A+DLH   W+FRHI+RGQP+RHLL +
Sbjct: 122 DTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLLTT 181

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A 
Sbjct: 182 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAA 241

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNY-SIGMRFKMRFEGEEAPEQRFTG 337
           HA +  + FTV+Y PR SPSEF++P  +Y +S+ ++  S+GMRF+M FE E++  +R  G
Sbjct: 242 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRHMG 301

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           T+ GI D DP +W++S+WR L+V WDE++   +  RVS+W+IEP  AP  +   P  R K
Sbjct: 302 TVTGISDLDPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSK 361

Query: 398 RPRSNMLPSSPDSSV 412
           RPR    P  PD  +
Sbjct: 362 RPRQ---PGMPDDEL 373


>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
 gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
          Length = 1096

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 184/344 (53%), Positives = 244/344 (70%), Gaps = 10/344 (2%)

Query: 47  TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVIN 105
           +ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +LPSK+ C + +
Sbjct: 30  SELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDGDVQVPNYSNLPSKLPCTLHS 89

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKE----PPPPPPPRFHVHSFCKTLTASDTS 161
           + L A+ DTDEV+A++TL P S+ D +A+ +         P P F    FCK LTASDTS
Sbjct: 90  LTLHADSDTDEVYARMTLQPVSSFDMDAILRSDISLKSNKPQPEF----FCKQLTASDTS 145

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV RR A++  PPLD S QPP QEL AKDLHGN W+FRHI+RGQP+RHLL +GWS
Sbjct: 146 THGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTGWS 205

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
           +F+S KRL+AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA 
Sbjct: 206 LFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAS 265

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIV 340
           +  + FTV+Y PR SPSEF++P  +Y  ++  +  S GMRF+M FE E++  +R+ GT++
Sbjct: 266 ANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSGTRRYMGTVI 325

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           G+ D D  RW++S+WR L+V WDE +   R  RVS+W+IEP  A
Sbjct: 326 GVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVTA 369


>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
          Length = 541

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 177/378 (46%), Positives = 243/378 (64%), Gaps = 14/378 (3%)

Query: 23  MEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAST 82
           M  Q     T GV R       LY +LW  CAGPL  +P+ GE VYYFPQG+IEQ+ AS 
Sbjct: 7   MNAQPKFRGTEGVNRY------LYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASA 60

Query: 83  NQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP 142
           N    Q  P++D+ S+I C VI+++LK E +TDEV+A+V+LLP S + E        P  
Sbjct: 61  NDNLCQLKPIFDISSRIHCNVISIKLKVETNTDEVYAKVSLLPCSPEVEITF-----PND 115

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
               ++  F K LTASD   HG F + ++ A ECLPPLDMS+  P+QE+ AKDLH + W+
Sbjct: 116 NNEQNIKYFTKVLTASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWK 175

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           F+H FRG P+RHL  SGW  FV  K L  GD+F+FLRGENGE RVG+R+   QQ ++ SS
Sbjct: 176 FKHTFRGTPKRHLFTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKTSHQQSDMSSS 235

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
           VIS  SMH G +A+A +A+ T  MF V+YKP++  S+FIV  D++++++   ++   RF 
Sbjct: 236 VISKESMHHGFIASASNAIHTKCMFDVFYKPKS--SKFIVNCDKFLDAVNMKFNTSSRFT 293

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
           M+FEG +  E  ++GTIV +ED     W+ S+WR L+V+WDE +TIPRP +VSLW+IEP 
Sbjct: 294 MKFEGHDFNEIIYSGTIVKMEDFSI-YWKGSEWRNLQVQWDEAATIPRPNKVSLWEIEPL 352

Query: 383 LAPPALNSLPMPRPKRPR 400
           +    +    +   KR R
Sbjct: 353 IPSSNILKSVIQNNKRQR 370


>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
           leschenaultii]
          Length = 550

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 193/415 (46%), Positives = 257/415 (61%), Gaps = 44/415 (10%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+V++P++G  V YFPQGH+EQ+      ++        LP  +  RV
Sbjct: 20  AVNIELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHFVGLSADA-----LPPHVFSRV 74

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENA-----------------VEKEPPPPPPPRF 146
           ++V L A+  TDEV+AQ++L+P S ++  +                  +K  P   P   
Sbjct: 75  VHVTLMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLGPTKIP--- 131

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
             H FCKTLTASDTSTHGGFSV RR A++C PPLD  +Q PTQEL AKDLHG EWRFRHI
Sbjct: 132 --HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFRHI 189

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           +RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+G+RRA++ +     ++ +S
Sbjct: 190 YRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPAIQNS 249

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFE 326
           +      ++    A+S  ++F + Y PR   SEFIVPY ++M+S  +  SIG RFKM FE
Sbjct: 250 N------ISNIAQAISKKSLFHICYNPRDGQSEFIVPYWKFMKSFNHPISIGTRFKMNFE 303

Query: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
            E+A E+R+ G I GI D DP RW  SKWRCL VRWDE     R  RVS W+IE  L   
Sbjct: 304 SEDASERRYNGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIE--LTGT 361

Query: 387 ALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFS 441
               +  P  KR    + P +P    +T   +S   ++PS    F +VLQGQE S
Sbjct: 362 VSQGMMAPNSKR----LKPCTP---TITGNNNSSDYLEPSGR--FQKVLQGQEMS 407


>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
          Length = 697

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 207/484 (42%), Positives = 278/484 (57%), Gaps = 48/484 (9%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E +  + +  A        +P  + CRV
Sbjct: 26  AVCLELWHACAGPVGPLPRKGSAVVYLPQGHLEHIGDAGSAAAK-------VPPHVFCRV 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPES-------------------NQDENAVEKEPPPPPPP 144
           ++V L+A+  TDEV+AQVTL  ++                    +D +A+++ P  P   
Sbjct: 79  VDVNLQADAATDEVYAQVTLAVDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIP--- 135

Query: 145 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
               H FCKTLTASDTSTHGGFSV RR A++C PPLD S   P+QEL AKDLHG EWRFR
Sbjct: 136 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFR 191

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           HI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRGE+GELR+GVRR  + +   P    
Sbjct: 192 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPFPAP 251

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
            +       L    HA++  + F VYY PR   SEFI+PY ++M S+   +S GMRFKMR
Sbjct: 252 HNQDPGHSSLGNVAHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSVGQPFSAGMRFKMR 311

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           +E E+A E+R TG I+G  ++DP+ +  SKW+CL VRWD+     RP RVS W IE   A
Sbjct: 312 YENEDASERRSTGIIIGSRESDPKSY-GSKWKCLVVRWDDDIEGRRPNRVSPWDIELTGA 370

Query: 385 PPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
               + L +   KR +  +   +PD  +L   GS  ++ D + +  F +VLQGQE     
Sbjct: 371 VSG-SHLSIHHSKRMKPCLPQVNPD--MLLPSGS--VSSDFAESARFHKVLQGQELL--- 422

Query: 445 GNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENW---VPPGRHEPVYTDLL 501
             F   E   S +++ S        DE+   ++ S   G        PPG H   Y    
Sbjct: 423 -GFKTHEGTVSASSQASEARSFQYTDERSCSINMSNVAGVPRLGAGTPPGNHGFSYH--C 479

Query: 502 SGFG 505
           SGFG
Sbjct: 480 SGFG 483


>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
          Length = 1136

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 188/365 (51%), Positives = 242/365 (66%), Gaps = 20/365 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQV------EASTNQVADQQMPVY-DLP 96
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV       AS  +  D  +P Y +LP
Sbjct: 40  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLP 99

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
           SK++C +  V L A+PDTDEV+AQ+TL P +   + A++         R  +  FCKTLT
Sbjct: 100 SKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLT 159

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSV RR A++  PPLD S QPP QEL A+D+H N W FRHI+RGQP+RHLL
Sbjct: 160 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLL 219

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWS+FVS KRL AGD+ I +R E  +L +G+RRA RQ  N+ SSV+SS SMH+GVLA 
Sbjct: 220 TTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAA 279

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRF 335
           A HA +  + FT++Y PR SP+EF++P+ +Y +++  N  S+GMRF+M FE EE   +R+
Sbjct: 280 AAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRY 339

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPR 395
            GTI GI D DP            V WDE++   R  RVS+W+IEP  AP  L   P   
Sbjct: 340 MGTITGISDLDP------------VGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFG 387

Query: 396 PKRPR 400
            KRPR
Sbjct: 388 VKRPR 392


>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
          Length = 549

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 166/346 (47%), Positives = 235/346 (67%), Gaps = 18/346 (5%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           V  +G+    L  +LW  CAGPL   P+ GE++            AS +    Q  P++D
Sbjct: 13  VLAIGETNNYLNDKLWKLCAGPLFDTPKIGEKLV-----------ASMDDELCQLKPIFD 61

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKT 154
           +PSKI C V ++ LK EP T+E++A+V+LLP    D + VE   P       +++ F K 
Sbjct: 62  IPSKICCNVFSINLKVEPSTNEIYAEVSLLP----DTSDVEIPIPKNENNIQNINYFTKV 117

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           L+ASDTST+GGF + +RHA ECLP LDMS+  P+QE+ AKD+HG+EW F+H  RG P+RH
Sbjct: 118 LSASDTSTNGGFVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRH 177

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           L  SGW+ F   K+LVAGD+F+FLRGENGE RVG+ +A  QQ N+P+S+IS  SMH  V+
Sbjct: 178 LFTSGWNEFAKGKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVV 237

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           ATA +A+    MF V+YKPR+  S+FIV +D++++ + N +SIG +F M+FEG++  E R
Sbjct: 238 ATALNAIENKCMFVVFYKPRS--SQFIVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNEIR 295

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           + GT+VG+ D     W+DS+WR L+V+WDE +TIPRP++VS W+IE
Sbjct: 296 YNGTVVGVRDFSTH-WKDSEWRSLEVQWDEAATIPRPDKVSPWEIE 340


>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 629

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 176/373 (47%), Positives = 242/373 (64%), Gaps = 31/373 (8%)

Query: 27  NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVA 86
           N+    SG+  V + +  +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE +  S +   
Sbjct: 8   NAQPELSGIT-VDESKSYMYEQLWKLCAGPLYDIPKVGEKVYYFPQGHIEILSLSLSLSL 66

Query: 87  DQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPES------NQDENAVEKEPPP 140
              + +    S  L RVI +QLK E ++DE +A++TL+P +      NQ++N        
Sbjct: 67  SLSLSLSLSLSLSLSRVIAIQLKVEKNSDETYAEITLMPYTTQVVIHNQNDNHY------ 120

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
               R  V+SF K LTASDTS HGGFSV R+HA ECLPPL+MS   P QEL   DL GN+
Sbjct: 121 ----RPSVNSFTKVLTASDTSAHGGFSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQ 176

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 260
           WRF+H +RG P RHL+ +GW+ F +SK+LVAGD  +FLRGE GELRVG+RRA  QQGN P
Sbjct: 177 WRFKHSYRGTPPRHLITTGWNAFTTSKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRP 236

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
           SS+IS  SM  GV+A+A HA     MF V  KP    S+FIV YD++++++   +++G R
Sbjct: 237 SSLISIDSMGHGVIASAVHAFDNQCMFIVVCKPSIRSSQFIVSYDKFLDAVNKKFNVGSR 296

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWR-------------CLKVRWDETST 367
           F MRFEG++  E+R++GTI+G++D  P  W +S+WR              L+V+WDE ++
Sbjct: 297 FTMRFEGDDLSERRYSGTIIGVKDFSPH-WIESEWRSLEVKFSFTLYNIILRVKWDEFAS 355

Query: 368 IPRPERVSLWKIE 380
            PRP++VS W+IE
Sbjct: 356 FPRPDKVSPWEIE 368


>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
 gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
          Length = 702

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 187/419 (44%), Positives = 258/419 (61%), Gaps = 35/419 (8%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E +    +           +P  +LCRV
Sbjct: 32  AVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHIGGDADAAGAA------VPPHVLCRV 85

Query: 104 INVQLKAEPDTDEVFAQVTLLP-----------------ESNQD-ENAVEKEPPPPPPPR 145
           ++V L A+  TDEV+A+V+LLP                 ++++D E+    +P    P  
Sbjct: 86  VDVTLHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLARTP-- 143

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
              H FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRH
Sbjct: 144 ---HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRH 200

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
           I+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRGE+G LR+GVRRA + +   P   + 
Sbjct: 201 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPALH 260

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           +       L     AV+T T+F +YY PR S SEFIVPY ++  S+    S+GMR +MR+
Sbjct: 261 NQCSSQTTLGNVAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRSLNQPISVGMRCRMRY 320

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           E ++A E+R TG I+G  +A+P  W  SKW+CL VRWD+      P RVS W+IE     
Sbjct: 321 ESDDASERRCTGIIIGSREAEPI-WYGSKWKCLVVRWDDGIECHWPNRVSPWEIE-VTGS 378

Query: 386 PALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
            + + +  P  KR +  +   +P+  ++   GS  ++ D + +  F +VLQGQE   L+
Sbjct: 379 VSGSHMCAPNSKRLKPCLPQVNPE--IVLPNGS--VSSDFAGSVRFHKVLQGQELLGLK 433


>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 514

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/276 (61%), Positives = 210/276 (76%), Gaps = 8/276 (2%)

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           +PP   P +  V SF K LTASDTSTHGGFSVLR+HA ECLP LDM++  PTQEL A+DL
Sbjct: 23  DPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDL 82

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR  +QQ
Sbjct: 83  HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQ 142

Query: 257 GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
             +P+SVISS SM LGVLATA HAV+T T+F V+YKPR   S+FI+  ++YM ++KN +S
Sbjct: 143 STMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNGFS 200

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSL 376
           +GMR++MRFEGEE+PE+ FTGTI+G  D   Q W  SKWR L+++WDE S+I RP +VS 
Sbjct: 201 LGMRYRMRFEGEESPERIFTGTIIGSGDLSSQ-WPASKWRSLQIQWDEPSSIQRPNKVSP 259

Query: 377 WKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSV 412
           W+IEP  +P AL     P P + +S    S P S +
Sbjct: 260 WEIEP-FSPSALT----PTPTQQQSKSKRSRPISEI 290


>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
           from Arabidopsis thaliana gb|AF186466 [Arabidopsis
           thaliana]
          Length = 1062

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 182/362 (50%), Positives = 241/362 (66%), Gaps = 26/362 (7%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + ++LWHACAGPLV++P  G  V YFPQGH EQV AS  +  D  +P Y +LPSK++C +
Sbjct: 20  INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDF-IPNYPNLPSKLICLL 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            +V L A+ +TDEV+AQ+TL P      N + ++P            FCKTLTASDTSTH
Sbjct: 79  HSVTLHADTETDEVYAQMTLQPV-----NKLNRQP---------TEFFCKTLTASDTSTH 124

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD S QPP QE+ AKDLH   W FRHI+RG          WSVF
Sbjct: 125 GGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRG----------WSVF 174

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R E  +L +G+RRA RQ   + SSVISS SMH+G+LA A HA + 
Sbjct: 175 VSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANAN 234

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT+++ PR SPSEF+VP  +Y +++    S+GMRF+M FE E+   +R+ GT+ GI 
Sbjct: 235 SSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGIS 294

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D DP RW+ S+WR L+V WDE++   RP RVS+W+IEP + P  +   P  RPK PR   
Sbjct: 295 DLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPPPFFRPKYPRQPG 354

Query: 404 LP 405
           +P
Sbjct: 355 MP 356


>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
 gi|224033653|gb|ACN35902.1| unknown [Zea mays]
 gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
 gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
          Length = 708

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 187/411 (45%), Positives = 253/411 (61%), Gaps = 24/411 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E +     + A        +P  +LCRV
Sbjct: 30  AVCLELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASA----VPPHVLCRV 85

Query: 104 INVQLKAEPDTDEVFAQVTLLPESN-------------QDENAVEKEPPPPPPPRFHV-H 149
           ++V L A+  TDEV+A+V+LLPE               +DE+  + E      P     H
Sbjct: 86  VDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPH 145

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RG
Sbjct: 146 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRG 205

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QPRRHLL +GWS FV+ K+L++GDA +FLRGE+G LR+GVRRA + +   P     +   
Sbjct: 206 QPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCS 265

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
               L     AV+T T+F +YY PR + SEFIVPY ++  S     S+GMR +MR+E ++
Sbjct: 266 SNSNLGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDD 325

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           A E+R TG I+G  +ADP  W  SKW+CL VRWD+      P RVS W+IE      + +
Sbjct: 326 ASERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIE-LTGSVSGS 383

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            +  P  KR +  +   +P+  ++   GS  ++ D + +  F +VLQGQE 
Sbjct: 384 QMCAPSSKRLKPCLPQVNPE--IVLPNGS--VSSDFAGSARFHKVLQGQEL 430


>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
          Length = 698

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 187/411 (45%), Positives = 253/411 (61%), Gaps = 24/411 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+  +PR+G  V Y PQGH+E +     + A        +P  +LCRV
Sbjct: 30  AVCLELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASA----VPPHVLCRV 85

Query: 104 INVQLKAEPDTDEVFAQVTLLPESN-------------QDENAVEKEPPPPPPPRFHV-H 149
           ++V L A+  TDEV+A+V+LLPE               +DE+  + E      P     H
Sbjct: 86  VDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPH 145

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RG
Sbjct: 146 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRG 205

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QPRRHLL +GWS FV+ K+L++GDA +FLRGE+G LR+GVRRA + +   P     +   
Sbjct: 206 QPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCS 265

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
               L     AV+T T+F +YY PR + SEFIVPY ++  S     S+GMR +MR+E ++
Sbjct: 266 SNSNLGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDD 325

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           A E+R TG I+G  +ADP  W  SKW+CL VRWD+      P RVS W+IE      + +
Sbjct: 326 ASERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIE-LTGSVSGS 383

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            +  P  KR +  +   +P+  ++   GS  ++ D + +  F +VLQGQE 
Sbjct: 384 QMCAPSSKRLKPCLPQVNPE--IVLPNGS--VSSDFAGSARFHKVLQGQEL 430


>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 645

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 184/389 (47%), Positives = 241/389 (61%), Gaps = 24/389 (6%)

Query: 67  VYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE 126
           V Y PQGH++ +  +                 + CRV++V L A+  TDEV+AQ++LLPE
Sbjct: 1   VVYLPQGHLDHLGDAPAPSPAAVP------PHVFCRVVDVTLHADASTDEVYAQLSLLPE 54

Query: 127 SNQ--------DENAVEKEPPPPPPPRFHV--HSFCKTLTASDTSTHGGFSVLRRHADEC 176
           + +         E+    E       RF    H FCKTLTASDTSTHGGFSV RR A++C
Sbjct: 55  NEEVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDC 114

Query: 177 LPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFI 236
            PPLD S+Q P QEL AKDLHG EW+FRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +
Sbjct: 115 FPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVL 174

Query: 237 FLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTS 296
           FLRG++GELR+GVRRA++ +       + S   +LG LA   HAV+T +MF ++Y PR S
Sbjct: 175 FLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRLS 234

Query: 297 PSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWR 356
            SEFIVPY ++ +S    +S+G RFKMR+E E+A E+R+TG I G  DADP  WR SKW+
Sbjct: 235 QSEFIVPYWKFTKSFSQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADPM-WRGSKWK 293

Query: 357 CLKVRWDETSTIPRPERVSLWKIEPALAPPALNS-LPMPRPKRPRSNMLPSSPDSSVLTR 415
           CL VRWD+     RP RVS W+IE  L   A  S L  P  KR +  +  ++P+ +V   
Sbjct: 294 CLLVRWDDDGEFRRPNRVSPWEIE--LTSSASGSHLAAPTSKRMKPYLPHANPEFTVPHG 351

Query: 416 EGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
            G      D + +    +VLQGQE    R
Sbjct: 352 GGRP----DFAESAQVRKVLQGQELLGYR 376


>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
 gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
          Length = 363

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 181/355 (50%), Positives = 239/355 (67%), Gaps = 33/355 (9%)

Query: 33  SGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV 92
           SG+++      A+ +ELW+ACAGPLV++P+ G  VYYFPQGH EQV  ST + A  Q+P 
Sbjct: 11  SGIRK------AINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPN 64

Query: 93  Y-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP-----PPRF 146
           Y +LPS++LC+V NV L A+ DTDE++AQ++L P +       EK+  P P     P + 
Sbjct: 65  YPNLPSQLLCQVHNVTLHADKDTDEIYAQMSLQPVNT------EKDVFPIPDFGLRPSKH 118

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
               FCKTLTASDTSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRHI
Sbjct: 119 PSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHI 178

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
           +RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+
Sbjct: 179 YRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSA 238

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRF 325
            SMH+GVLA A HA +  + FT++Y PR  PS+F++P  ++ +++     S+GMRF M F
Sbjct: 239 DSMHIGVLAAAAHATANRSPFTIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMF 298

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           E EE+ ++R+ GTIVGI D               V WDE     +  RVS W+IE
Sbjct: 299 ETEESGKRRYMGTIVGISDL--------------VEWDEPGCSDKQNRVSSWEIE 339


>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
          Length = 767

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 160/303 (52%), Positives = 218/303 (71%), Gaps = 7/303 (2%)

Query: 78  VEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE 137
           VEAST +  ++  P+ D PSK+ CRVI +QLK E ++DE +A++TL+P++ Q     + +
Sbjct: 113 VEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQ 172

Query: 138 PPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLH 197
               P     V+SF K LTASDTS HGGFSV ++HA ECLPPLDMS+  PTQE+ A DLH
Sbjct: 173 NQFRP----LVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLH 228

Query: 198 GNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 257
           GN+WRFRHI+RG  +RHLL  GW+ F +SK+LV GD  +F+RGE GELRVG+RRA  QQG
Sbjct: 229 GNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQG 288

Query: 258 NVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSI 317
           N+PSS++S  SM  G++A+A HA     MF V YKPR+  S+FIV YD++++ + N +++
Sbjct: 289 NIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVVNNKFNV 346

Query: 318 GMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLW 377
           G RF MRFEG++  E+R  GTI+G+ D  P  W+ S+WR L+V+WDE ++ PRP +VS W
Sbjct: 347 GSRFTMRFEGDDFSERRSFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFASFPRPNQVSPW 405

Query: 378 KIE 380
            IE
Sbjct: 406 DIE 408



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 27/34 (79%)

Query: 45 LYTELWHACAGPLVTVPREGERVYYFPQGHIEQV 78
          +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE V
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELV 57


>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
 gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
          Length = 926

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 179/358 (50%), Positives = 229/358 (63%), Gaps = 52/358 (14%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 29  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIP 82

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y +LPS++LC+V N+ L A+ DTDEV+AQ+TL P        V  E    P P    ++
Sbjct: 83  NYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQP--------VNSETDVFPIPTLGAYT 134

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 135 KSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 194

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+                        
Sbjct: 195 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFI------------------------ 230

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
                SMH+GVLA A HA S+G+ FT+YY PRTSPS F++P  +Y ++     S+GMRF 
Sbjct: 231 -----SMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFA 285

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           M FE EE+ ++R+TGT+VGI D DP RW +SKWR L+V WDE     RPERVS+W IE
Sbjct: 286 MMFETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 343


>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
          Length = 470

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 180/347 (51%), Positives = 230/347 (66%), Gaps = 27/347 (7%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            + +ELWHACAGPLV +P+ G  VYYF QGH EQV  ST + A  Q+P Y +LPS+++C+
Sbjct: 44  VINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQ 103

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS--------FCKT 154
           V NV L A+ D+DE++AQ++L P        V  E    P P F + +        FCKT
Sbjct: 104 VHNVTLHADKDSDEIYAQMSLQP--------VHSERDVFPVPDFGLLNRSKHPAEFFCKT 155

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++  PPLD + QPPTQEL  +DLH N W FRHI+RGQP+RH
Sbjct: 156 LTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRH 215

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FV SKRL AGD+ +F+R E  +L VGVRRA RQQ  +PSSV+S+ SMH+GVL
Sbjct: 216 LLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVL 275

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKN-NYSIGMRFKMRFEGEEAPEQ 333
           A A HA +  T F ++Y PR  P+EF++P  +Y ++I     S GMRF M FE E++ ++
Sbjct: 276 AAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKR 335

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
                     D DP RW  SKWR L+V WDE     +P RVS W IE
Sbjct: 336 ---------SDMDPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 373


>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 614

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 218/487 (44%), Positives = 281/487 (57%), Gaps = 36/487 (7%)

Query: 250 RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYME 309
           RRAMRQ  NVPSSVISSHSMHLGVLATAWHA++T +MFTVYYKPRTSPSEFI+PYDQYME
Sbjct: 38  RRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYME 97

Query: 310 SIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIP 369
           S+KNNYSIGMRF+MRFEGEEAPEQRFTGTIVG E+ D Q W +S WR LKVRWDE STIP
Sbjct: 98  SVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLD-QLWPESNWRSLKVRWDEPSTIP 156

Query: 370 RPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSA- 428
           RP+RVS WKIEPA +PP +N LP+ R KRPR N+ P SP+SSVLT+EG++K+++D + A 
Sbjct: 157 RPDRVSPWKIEPASSPP-VNPLPLSRVKRPRPNVPPVSPESSVLTKEGATKIDMDSAQAQ 215

Query: 429 --TGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSEN 486
                S VLQGQE  TLR N     ++   T +K ++W PS +  K    +  +R   EN
Sbjct: 216 QRNQNSMVLQGQEHMTLRTNNLTGSNDSDATVQKPMMWSPSPNIGKNHASAFQQRPSMEN 275

Query: 487 WVPPGRHEPVYTDLLSGFGANADPSHGFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMP 546
           W+  GR E  + D  SG  +  D S GF     D  P R      + + +  AR +S   
Sbjct: 276 WMQLGRCETAFKDASSGAQSFGD-SQGFFMQTFDEAPNRHGSFKNQFQDHSSARHFS--- 331

Query: 547 SGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPS 606
                   +   K+  +  + ++    +  YG   D     G R E    NWL       
Sbjct: 332 --------DPYTKMHTEANEFHFWNSQSTVYGNPRDQS--QGFRFEEHPSNWLR----QQ 377

Query: 607 NFENSAHSRELMPKSAM--VQDQEAGKSKDCKLFGIPLF-----SNHVMPEPVVSHRNTM 659
            F      R + P++++  V  ++A +    K+FG  +      SNH+     V H   +
Sbjct: 378 QFSPVEQPRVIRPQASIAPVDLEKAREGSGFKIFGFKVDTTSAPSNHLSSTMAVIHEPVL 437

Query: 660 NEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGS 719
              A     Q +    D   + S S+    +N      EK  Q +   +KDV+SK+   S
Sbjct: 438 QTQASASLTQLQHAHIDCIPELSVSTAGTTEN------EKSIQQAPNSSKDVQSKSHGAS 491

Query: 720 TRSCTKV 726
           TRSCTKV
Sbjct: 492 TRSCTKV 498


>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 588

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 190/403 (47%), Positives = 240/403 (59%), Gaps = 39/403 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V YFPQGH+EQ         D    +Y LP  + CR+++V+
Sbjct: 52  ELWHACAGPLISLPKRGSLVLYFPQGHLEQA-------PDFSAAIYGLPPHVFCRILDVK 104

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEK--------EPPPPPPPRFHV-HSFCKTLTAS 158
           L AE  TDEV+AQV+LLPES   E  V +        E       R +  H FCKTLTAS
Sbjct: 105 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 164

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD S+  P+QEL A+DLHG EWRFRHI+RGQPRRHLL +
Sbjct: 165 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 224

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNV-PSSVISSHSMHLGVLATA 277
           GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA + +G + P   I             
Sbjct: 225 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTLMPYRPI------------- 271

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
                  + FT       S S FI+P  ++++ +   + IGMRFK R E E+A E+R  G
Sbjct: 272 -----VFSAFTTTNHNWASWSNFIIPAPKFLKIVDYPFCIGMRFKARVESEDASERRSPG 326

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
            I GI D DP RW  SKWRCL VRWD+       +RVS W+IEP+ +     S     PK
Sbjct: 327 IITGISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEPSGSISNSGSFVTTGPK 386

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           R R       PD  V   EG    + + S    F RVLQGQE 
Sbjct: 387 RSRIGFSSGKPDIPV--SEGIRATDFEESLR--FQRVLQGQEI 425


>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
          Length = 744

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 186/413 (45%), Positives = 258/413 (62%), Gaps = 36/413 (8%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y ELWH CAG L ++P++G  V YFPQGH+EQ  AS++      +  +DLP +I CRV+
Sbjct: 52  IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQA-ASSSPFPPMDISTFDLPPQIFCRVV 110

Query: 105 NVQLKAEPDTDEVFAQVTLLP---------ESNQDEN-AVEKEPPPPPPPRFHVHSFCKT 154
           NVQL A  + DEV+ QVTLLP         E  + E   V++E     P +   H FCKT
Sbjct: 111 NVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKT 170

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG EWRFRHI+RGQPRRH
Sbjct: 171 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 230

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS+FVS K LV+GDA +FLRGE GELR+G+RRA+R +  +P S+I + + +  VL
Sbjct: 231 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVL 290

Query: 275 ATAWHAVSTGTMF---TVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
           + A +AV+T +MF    V+ K              ++  +++   +  +F ++   E   
Sbjct: 291 SLAANAVATKSMFHGLKVFNK------------QTHLNMLQDGNQVN-KFFLKMLPEIHN 337

Query: 332 EQRF-----TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
            Q       +G + GI D DP RW +SKWRCL VRWD+       ERVS W+I+P+++ P
Sbjct: 338 LQNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLP 397

Query: 387 ALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
            L+    PR K+ R+++  + P++ +    G   L+ + S  +  S+VLQGQE
Sbjct: 398 PLSIQSSPRLKKLRTSLQATPPNNPI--NGGGGFLDFEESVRS--SKVLQGQE 446


>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
          Length = 856

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 174/328 (53%), Positives = 230/328 (70%), Gaps = 4/328 (1%)

Query: 82  TNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP 140
           TN+  D  +P Y  LP +++C++ +V + A+ +TDEV+AQ+TL P + Q++         
Sbjct: 1   TNKEVDTHIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQEQKDAYLPAEL 60

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
             P R   + FCK LTASDTSTHGGFSV RR A++  PPLD ++QPP+QEL A+DLHGNE
Sbjct: 61  GTPSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLHGNE 120

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 260
           W+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGDA IF+  E  +L +G+RR  R Q  +P
Sbjct: 121 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQSVMP 180

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGM 319
           SSV+SS SMH+G+LA A HA +T + FTV+Y PR SPSEF++P  +Y +++     S+GM
Sbjct: 181 SSVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRISVGM 240

Query: 320 RFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKI 379
           RF+M FE EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+I
Sbjct: 241 RFRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSLWEI 300

Query: 380 EPALAPPALNSLPMP-RPKRPRSNMLPS 406
           EP    P   S P P R +RP  + LPS
Sbjct: 301 EPLTTFPMYPS-PFPLRLRRPWPSGLPS 327


>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
 gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
 gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 479

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 161/338 (47%), Positives = 216/338 (63%), Gaps = 35/338 (10%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW+ CAGPL  +P+ GE+VYYFPQGHIE +E ST    D   P++DLPSK+ CRV+
Sbjct: 22  MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            +  K + +TDEV+AQ++L+P++ +    V          R  V+ F K LTASD S  G
Sbjct: 82  AIDRKVDKNTDEVYAQISLMPDTTE----VMTHNTTMDTRRPIVYFFSKILTASDVSLSG 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS--GWSV 222
           G  + +++A EC PPLDMS+   TQ L AKDL+G EW F+H+FRG P+RH+  S  GWSV
Sbjct: 138 GLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           F ++KRL+ GD F+ LRGENGELR G+RRA  QQG++PSSVIS++ M  GV+A+  +A  
Sbjct: 198 FATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFK 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
           T  MF V YKPR                            M+FEG++  E+R+ GTI+G+
Sbjct: 258 TKCMFNVVYKPR----------------------------MQFEGKDFSEKRYDGTIIGV 289

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
            D  P  W+DS+WR LKV+WDE S   RP +VS W IE
Sbjct: 290 NDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326


>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
 gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 546

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 161/338 (47%), Positives = 216/338 (63%), Gaps = 35/338 (10%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW+ CAGPL  +P+ GE+VYYFPQGHIE +E ST    D   P++DLPSK+ CRV+
Sbjct: 22  MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            +  K + +TDEV+AQ++L+P++ +    V          R  V+ F K LTASD S  G
Sbjct: 82  AIDRKVDKNTDEVYAQISLMPDTTE----VMTHNTTMDTRRPIVYFFSKILTASDVSLSG 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS--GWSV 222
           G  + +++A EC PPLDMS+   TQ L AKDL+G EW F+H+FRG P+RH+  S  GWSV
Sbjct: 138 GLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSV 197

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           F ++KRL+ GD F+ LRGENGELR G+RRA  QQG++PSSVIS++ M  GV+A+  +A  
Sbjct: 198 FATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFK 257

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
           T  MF V YKPR                            M+FEG++  E+R+ GTI+G+
Sbjct: 258 TKCMFNVVYKPR----------------------------MQFEGKDFSEKRYDGTIIGV 289

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
            D  P  W+DS+WR LKV+WDE S   RP +VS W IE
Sbjct: 290 NDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326


>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 182/421 (43%), Positives = 248/421 (58%), Gaps = 28/421 (6%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           V+  G+   A+  ELWHACAGP V +PR G  V Y PQ H+    A+    A        
Sbjct: 8   VEEDGETAGAVCGELWHACAGPGVALPRRGSAVVYLPQAHL----AAGGGDAPAPAGRAH 63

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPES--------------NQDENAVEKEPPP 140
           +P  + CRV+ V+L A+  TDEV+A++ L+ E+               +DE A       
Sbjct: 64  VPPHVACRVVGVELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMAAGDGENK 123

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
           P  P    H FCKTLTASDTSTHGGFSV RR A++C   LD  +  P+QEL AKDLHG +
Sbjct: 124 PRMP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHGTQ 179

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 260
           WRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +    
Sbjct: 180 WRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRNEAL 239

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
              ++++   L  L+    ++   ++F V + PR+  SEFIVPY ++ +S+ + +SIGMR
Sbjct: 240 FEAVNTNDSKLHTLSAVASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHTFSIGMR 299

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           FK+  E ++A E R TG I GI + DP RW  SKWRCL VRWD+++      RVS W+IE
Sbjct: 300 FKVSNESDDANE-RSTGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPWEIE 358

Query: 381 PALAPPAL-NSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
                 ++ + L     KR +      + D+ V    G     +D   A  F RVLQGQE
Sbjct: 359 RVGGSISVTDCLSASSSKRAKLYFPQGNLDAPVTDGNGC----LDSMEAGNFHRVLQGQE 414

Query: 440 F 440
            
Sbjct: 415 L 415


>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
          Length = 1092

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 175/342 (51%), Positives = 237/342 (69%), Gaps = 7/342 (2%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRV 103
           + +ELWHACAGPLV++P  G  V YFPQGH EQV AS N+  D  +P Y +LPSK++C +
Sbjct: 20  INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDF-IPNYPNLPSKLICML 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            NV L A+P+TDEV+AQ+TL P +  ++ A+          R     FCKTLTASDTSTH
Sbjct: 79  HNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTH 138

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPL+M+       L +  +H N      IF GQP+RHLL +GWSVF
Sbjct: 139 GGFSVPRRAAEKIFPPLNMNMN--VVILISLQIHKN---VHCIFSGQPKRHLLTTGWSVF 193

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVISS SMH+G+LA+A HA + 
Sbjct: 194 VSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAAN 253

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE EE+  +R+ GTI GI 
Sbjct: 254 NSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGIS 313

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           D D  RW++S+WR L+V WDE++   RP RVS+W++EP + P
Sbjct: 314 DMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVTP 355


>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
 gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
          Length = 821

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 179/370 (48%), Positives = 236/370 (63%), Gaps = 24/370 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 27  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQ 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           + +V + A+ +TDEV+AQ+TL P + Q++N            +   + FCKTLTASDTST
Sbjct: 87  LHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTST 146

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR------------GQ 210
           HGGFSV RR A+   PPL +S            LHG       IF              Q
Sbjct: 147 HGGFSVPRRAAERVFPPLVISHSSLQHR---SLLHG-------IFMMSSGNSGISSEASQ 196

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           P+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+SS SMH
Sbjct: 197 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMH 256

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEE 329
           +G+LA A HA +T + FT++Y PR SPSEF++P  +Y++++     S+GMRF+M FE EE
Sbjct: 257 IGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEE 316

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
           +  +R+ GTI  + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    P   
Sbjct: 317 SSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYP 376

Query: 390 SLPMPRPKRP 399
           SL   R K P
Sbjct: 377 SLFPLRVKHP 386


>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
          Length = 555

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 159/340 (46%), Positives = 223/340 (65%), Gaps = 31/340 (9%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           LY +LW  CAGPL   P+ GE +             S N    Q  PV+++PSKI C V 
Sbjct: 23  LYDQLWKLCAGPLFDPPKIGEELV-----------TSINDELCQLKPVFNIPSKIRCNVF 71

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           +++LK E  TDE++A+++LLP++++ E    K          ++  F K L+ASDTS  G
Sbjct: 72  SIKLKVETTTDEIYAEISLLPDTSEVEIPTSKCENNIQ----NIKCFTKVLSASDTSKKG 127

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GF + +RHA ECLPPLDMS   P+QE+ A D+HG+EW+F+H  +G P+RHL  SGW+ F 
Sbjct: 128 GFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHLFTSGWNEFA 187

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAM-RQQGNVPSSVISSHSMHLGVLATAWHAVST 283
            +K+LV GD+FIFLRGENGE RVG+++A   QQ N+PSS+IS  SMH GV+ATA +A+  
Sbjct: 188 KAKKLVVGDSFIFLRGENGESRVGIKKAAHHQQENIPSSIISKESMHHGVVATALNAIKN 247

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE--QRFTGTIVG 341
             MF V+YKPR+  S+F+V  D++ + +   +SIG RF M+FEG++  E  +RF      
Sbjct: 248 KCMFVVFYKPRS--SQFVVNIDKFRDGVNKKFSIGSRFLMKFEGKDFNEISERFL----- 300

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP 381
                   W+DS+WRCL+V+WDE +TIPRP++VS W+IEP
Sbjct: 301 ------PHWKDSEWRCLEVQWDEAATIPRPDKVSPWEIEP 334


>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
          Length = 657

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 172/407 (42%), Positives = 244/407 (59%), Gaps = 23/407 (5%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+V +PR G +V Y PQ H+       +           LP  + CRV
Sbjct: 23  AVCRELWHACAGPIVALPRRGSKVVYLPQAHLAAAGCGGDVAVA-------LPPHVACRV 75

Query: 104 INVQLKAEPDTDEVFAQVTLLPES---------NQDENAVEKEPPPPPPPRFHVHSFCKT 154
           ++V+L A+P TDEV+A++ L+ E           ++E   + E          +  FCKT
Sbjct: 76  VDVELCADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDTEDGDGERKSRMLQMFCKT 135

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C  PLD  +  P+QEL AKDLHG +WRFRHI+RGQPRRH
Sbjct: 136 LTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRH 195

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+ K+LV+GDA +FLRG++GEL++GVRRA++ +        SS+S  +  L
Sbjct: 196 LLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSKMNAL 255

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           +   +++   ++F + Y PR + SEFIVPY ++++S+ + + IGMRFK+++  E+  E+R
Sbjct: 256 SAVANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLNHPFCIGMRFKIQYGSEDVNERR 315

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLPM 393
            +G I G+ + DP RW  S WR L VRW++ +      R+S W+IE      ++  SLP 
Sbjct: 316 -SGMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIEIVGGSVSIAQSLPA 374

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
              KR +   L S  +  V T  G+     D        RVLQGQE 
Sbjct: 375 SSSKRTK---LCSQSNLDVPTLYGNG--CPDSMGTDKLPRVLQGQEL 416


>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
 gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
          Length = 316

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 166/306 (54%), Positives = 217/306 (70%), Gaps = 13/306 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELW+ACAGPLV++P+ G  VYYFPQGH EQV  ST + A  Q+P Y +LPS++LC+
Sbjct: 16  AINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPNLPSQLLCQ 75

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP-----PPRFHVHSFCKTLTA 157
           V NV L A+ DTDE+ AQ++L P ++      EK+  P P     P +     FCK LTA
Sbjct: 76  VHNVTLHADKDTDEIHAQMSLQPVNS------EKDVFPVPDFGLKPSKHPSEFFCKALTA 129

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SDTSTHGGFSV RR A++  PPLD S QPP+QEL  +DLH N W FRHI+RGQP+RHLL 
Sbjct: 130 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKRHLLT 189

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS+FV SKRL AGD+ +F+R E   L VGVR A RQQ  +PSSV+S+ SMH+GVLA A
Sbjct: 190 TGWSLFVGSKRLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLSADSMHIGVLAAA 249

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA    + FT++Y PR  PS+F++P  ++ +++     S+GMRF M FE EE+ ++R+ 
Sbjct: 250 AHAAGNRSPFTIFYNPRACPSDFVIPLIKFRKTVFGTQVSVGMRFGMMFETEESGKRRYM 309

Query: 337 GTIVGI 342
           GTIVGI
Sbjct: 310 GTIVGI 315


>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
          Length = 674

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 181/430 (42%), Positives = 247/430 (57%), Gaps = 27/430 (6%)

Query: 25  GQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ 84
           G + N T SG +        +  +LWHACAGP+V++PR G  V Y PQGH+    A    
Sbjct: 2   GIDLNYTASGGEEDAPAPAPVCRDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGRI 61

Query: 85  VADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVE--------- 135
             +  +    LP  + CRV++V+L A+  TDEV+A++ L  E    E  +          
Sbjct: 62  RGEVAVA---LPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDD 118

Query: 136 KEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKD 195
            E          +H FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKD
Sbjct: 119 MEDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKD 178

Query: 196 LHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ 255
           LHG +WRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + 
Sbjct: 179 LHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQL 238

Query: 256 QGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNY 315
           +        SS S  +  L+    ++  G++F + Y PR + SE++VPY ++++S  +  
Sbjct: 239 KNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPV 298

Query: 316 SIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVS 375
            IGMRFK  +E E+  E+R +G I G+ + DP RW  SKWR L VRW++ +      RVS
Sbjct: 299 CIGMRFKFHYESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVS 357

Query: 376 LWKIEPALAPPAL-NSLPMPRPKR----PRSNMLPSSPDSSVLTREGSSKLNVDPSSATG 430
            W+IE      ++ +SL     KR    P+ N+     D   L   G      D      
Sbjct: 358 PWEIEIVGGSISVAHSLSASSSKRTKLCPQGNL-----DVPALYGNGRP----DSVETEK 408

Query: 431 FSRVLQGQEF 440
           F RVLQGQE 
Sbjct: 409 FPRVLQGQEL 418


>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
 gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
 gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
 gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
 gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
 gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 731

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 183/435 (42%), Positives = 249/435 (57%), Gaps = 27/435 (6%)

Query: 20  RIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVE 79
           R    G + N+T SG +        +  +LWHACAGP+V++PR G  V Y PQGH+    
Sbjct: 54  RATAMGIDLNNTASGGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAG 113

Query: 80  ASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVE---- 135
           A      +  +    LP  + CRV++V+L A+  TDEV+A++ L  E    E  +     
Sbjct: 114 AGGGIRGEVAVA---LPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGI 170

Query: 136 -----KEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE 190
                 E          +H FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QE
Sbjct: 171 EREDDMEDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQE 230

Query: 191 LAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVR 250
           L AKDLHG +WRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVR
Sbjct: 231 LVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVR 290

Query: 251 RAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 310
           RA + +        SS S  +  L+    ++  G++F + Y PR + SE++VPY ++++S
Sbjct: 291 RATQLKNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKS 350

Query: 311 IKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPR 370
             +   IGMRFK  FE E+  E+R +G I G+ + DP RW  SKWR L VRW++ +    
Sbjct: 351 FNHPVCIGMRFKFHFESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNS 409

Query: 371 PERVSLWKIEPALAPPAL-NSLPMPRPKR----PRSNMLPSSPDSSVLTREGSSKLNVDP 425
             RVS W+IE      ++ +SL     KR    P+ N+     D   L   G      D 
Sbjct: 410 QNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCPQGNL-----DVPALYGNGRP----DS 460

Query: 426 SSATGFSRVLQGQEF 440
                F RVLQGQE 
Sbjct: 461 VETEKFPRVLQGQEL 475


>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
 gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
          Length = 680

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 174/426 (40%), Positives = 248/426 (58%), Gaps = 19/426 (4%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           DP  A+  ELWHACAG  V +PR G  V Y PQ H+         V+    P   +P  +
Sbjct: 12  DPAGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGVSAPAPP--RVPPHV 69

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLP---------ESNQDENAVEKEPPPPPPPRFHVHS 150
           +CRV++V+L+A+  TDEV+A++ L+             + E    +E       +   H 
Sbjct: 70  VCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHM 129

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+RGQ
Sbjct: 130 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQ 189

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS F++ K+LV+GDA +FLRG +GELR+GVRRA++ +       ++     
Sbjct: 190 PRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSK 249

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           L +L+   +++   ++F + + PR   SEFIVPY ++++S+  ++S+G RFK+  E E+A
Sbjct: 250 LLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDA 309

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-N 389
            E+ F G I+GI + DP  W  SKW+ L ++WD  +      RVS W IE   +  ++ +
Sbjct: 310 NERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTH 368

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF--STLRGNF 447
            L     KR +    PS  D+ +L   G      D      F RVLQGQE   S++ G  
Sbjct: 369 RLSSSVSKRTKLCFPPSDLDTPILDGNGRP----DSVETERFHRVLQGQELVHSSIHGTA 424

Query: 448 AERESN 453
               S+
Sbjct: 425 CSHSSD 430


>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
          Length = 1474

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 163/304 (53%), Positives = 215/304 (70%)

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCK 153
           +LPSK++C + NV L A+P+T+EV+AQ+TL P +  D +A+          R     FCK
Sbjct: 353 NLPSKLICMLQNVTLNADPETEEVYAQMTLQPVNKYDRDALLASDMGLKINRQPNEFFCK 412

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLTASDTSTHGGFSV RR A++  P LD S QPP QEL AKD+H N W FRHIFRGQP+R
Sbjct: 413 TLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRGQPKR 472

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
           HLL +GWSVFVS+KRL AGD+ +F+R   G+L +G+RRA RQQ  + SSVISS SMH+GV
Sbjct: 473 HLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMHIGV 532

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           LA A HA +  + FT++Y PR +P+EF+VP  +Y +++    S+GMRF+M FE EE   +
Sbjct: 533 LAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVR 592

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R+ GT+ GI D DP RW++S+WR L++ WDE++   RP RVS+W IEP L P  +   P 
Sbjct: 593 RYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPF 652

Query: 394 PRPK 397
            RP+
Sbjct: 653 FRPR 656



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 105/223 (47%), Positives = 151/223 (67%), Gaps = 5/223 (2%)

Query: 180 LDMSRQPPTQELAAKDLHGNEWRFRHI-----FRGQPRRHLLQSGWSVFVSSKRLVAGDA 234
           + ++  P T+E+ A+       + R++     F GQP+RHLL +GWSVFVS+KRL AGD+
Sbjct: 82  VTLNADPETEEVYAQMTLQPVNKVRYLSLYNSFLGQPKRHLLTTGWSVFVSTKRLFAGDS 141

Query: 235 FIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR 294
            +F+R   G+L +G+RRA RQQ  + SSVISS SMH+GVLA A HA +  + FT++Y PR
Sbjct: 142 VLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPR 201

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSK 354
            +P+EF+VP  +Y +++    S+GMRF+M FE EE   +R+ GT+ GI D DP RW++S+
Sbjct: 202 AAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQ 261

Query: 355 WRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           WR L++ WDE++   RP RVS+W IEP L P  +   P  RP+
Sbjct: 262 WRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPR 304



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 17/105 (16%)

Query: 22  PMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEAS 81
           PMEG+  N               + +ELWHACAGPL+++P  G  V YFPQGH EQV AS
Sbjct: 13  PMEGERRN---------------INSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAAS 57

Query: 82  TNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLP 125
             +  D  +P Y +LPSK++C + NV L A+P+T+EV+AQ+TL P
Sbjct: 58  MQKQTD-FIPSYPNLPSKLICMLQNVTLNADPETEEVYAQMTLQP 101


>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 578

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 170/351 (48%), Positives = 225/351 (64%), Gaps = 38/351 (10%)

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           RVI +QLK E ++DE +A++TL+P + Q     + E    P     V+SF K LTASDTS
Sbjct: 39  RVIAIQLKVERNSDETYAEITLMPNTTQVVIPTQNENQFRP----LVNSFTKVLTASDTS 94

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
            HGGFSV R+ A ECLPPLDMS+  P QEL   DLHGN+WRF+H +RG PRRHLL +GW+
Sbjct: 95  AHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTGWN 154

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            F++SK+LVAGD  +FLRGE GELRV +RRA  QQGN+PSS+IS  SM  GV+A+A HA 
Sbjct: 155 AFITSKKLVAGDVIVFLRGETGELRVSIRRARYQQGNIPSSLISIESMRHGVIASAKHAF 214

Query: 282 STGTMFTVYYKPR--------TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
               MF V YKPR           S+FIV YD++++++ N +++G RF MRFE E   E+
Sbjct: 215 DNQCMFIVVYKPRFIFCVCISIRSSQFIVNYDKFLDAVNNKFNVGSRFTMRFEEENFSER 274

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R+ GTI+G+ D  P  W+ S+WR LKV+WDE ++ PRP++VS W+I+ +           
Sbjct: 275 RYFGTIIGVSDFSPH-WKCSEWRSLKVQWDEFASFPRPDKVSPWEIKHS----------- 322

Query: 394 PRPKRPRSNMLPSSPDSSVLTRE----GSSKLNVDPSSATGFSRVLQGQEF 440
                P SN+LPSS   +  +RE    GSS  ++ P   T      QGQE 
Sbjct: 323 ----TPSSNVLPSSMLKNKRSREFNEIGSSSSHLLPPILT------QGQEI 363


>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 630

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 191/408 (46%), Positives = 240/408 (58%), Gaps = 52/408 (12%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM--PVYDLPSKILC 101
           +LYTELW ACAG  V VPRE E V YFPQGH+EQV A T    D  M  PVYDLPSKILC
Sbjct: 20  SLYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHMEIPVYDLPSKILC 79

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           ++++++LKAE  +DEV+AQVTL+P   QD   +E E     P     ++F K LT SDTS
Sbjct: 80  KIMHIELKAEAFSDEVYAQVTLVPALKQDNLRLEVEENDQIPSITTTYTFSKILTPSDTS 139

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
           THGGFSV ++HADEC PPLDM++Q P QE+ AKDL+G                       
Sbjct: 140 THGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNG----------------------- 176

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNV--PSSVISSHSMHLGVLATAWH 279
                              E+GE+RVG+RRA     NV   SS+IS HSM LG+LA+A H
Sbjct: 177 ------------------AESGEIRVGIRRATEHLSNVSQSSSLISGHSMQLGILASASH 218

Query: 280 AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
           AVS+GTMF VYY P T+P EFIVP   Y++S   +Y IGMR +M+ E EE+  +R  GTI
Sbjct: 219 AVSSGTMFIVYYHPWTNPFEFIVPLRTYLKSTVPDYPIGMRVQMQHEVEES-LRRHAGTI 277

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDET-STIPRPERVSLWKIEPALAPPALNSLP-MPRPK 397
           +G ED D  RW  S+WRCLKV+WD        PERV  W IEP  +      +P +P  K
Sbjct: 278 IGHEDIDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIEPLESAKEKKQVPALPTTK 337

Query: 398 RPRSNMLPSSPD-SSVLTREGSSKLNVDPSSATGF-SRVLQGQEFSTL 443
           +  +    S P  SS    +G +  +  PSS T    R LQGQ++S +
Sbjct: 338 KALALNQRSLPGISSFGMHDGQN--SAGPSSQTRREDRDLQGQDYSGI 383


>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
          Length = 676

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 181/409 (44%), Positives = 245/409 (59%), Gaps = 31/409 (7%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGP V++PR+G  + Y PQGH+        +VA    PV   P  + CRV++V+
Sbjct: 26  ELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGEVAGAAPPV---PPHVACRVLDVE 82

Query: 108 LKAEPDTDEVFAQVTLLP---------------ESNQDENAVEKEPPPPPPPRFHVHSFC 152
           L A+  TDEV+A++ L+                E + +  + EK+P  P       H FC
Sbjct: 83  LCADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPRMP-------HMFC 135

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+RGQPR
Sbjct: 136 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPR 195

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           RHLL +GWS FV+ K+LV+GDA +FLRG +GELR+G+RRA++ +       ++S      
Sbjct: 196 RHLLTTGWSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQR 255

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
            L+    +    + F V + PR+  SEFIVPY ++ +S+ +  SIGMRFK+ +E E+A E
Sbjct: 256 TLSAVASSFRNRSTFHVCFDPRSGASEFIVPYWKFSKSLNHPLSIGMRFKLSYESEDANE 315

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSL 391
            R TG I G+ + DP RW  SKWRCL VRWD  +      R+S W+IE      ++ +SL
Sbjct: 316 -RSTGMISGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIERVGGMNSVTHSL 374

Query: 392 PMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
                KR + +   S+ D+ V+   G      D      F RVLQGQE 
Sbjct: 375 SASNSKRTKLSFPESNLDAPVIDGNGYP----DSMEIKKFRRVLQGQEL 419


>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 648

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 173/403 (42%), Positives = 243/403 (60%), Gaps = 23/403 (5%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAGP+V +PR G  + Y PQ H+       +       PV  LP  + CRV++V+
Sbjct: 23  DLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDA------PV-GLPPHVACRVVDVE 75

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAV---------EKEPPPPPPPRFHVHSFCKTLTAS 158
           L A+P TDEV+A++ L+ E    E  +         + E          +H FCKTLTAS
Sbjct: 76  LCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVDGERKSRMLHMFCKTLTAS 135

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+RGQPRRHLL +
Sbjct: 136 DTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 195

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW 278
           GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +        +S+S  +  L+   
Sbjct: 196 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLSAVV 255

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           +++   ++F + Y PR + SEFIVPY ++++S+   + IGMRFK+++  E+  E+R +G 
Sbjct: 256 NSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERR-SGM 314

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSLPMPRPK 397
           I GI + DP RW  SKW+ L VRW++        R+S W+IE      ++  SL     K
Sbjct: 315 ITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIEIVGGSVSIAQSLSASSSK 374

Query: 398 RPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           R +   L    +  V T  G+ +   D   A    RVLQGQE 
Sbjct: 375 RTK---LCPQGNLDVPTLYGNGR--PDSVGADKLPRVLQGQEL 412


>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
          Length = 811

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 174/292 (59%), Positives = 212/292 (72%), Gaps = 6/292 (2%)

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSV RR A++C PPLD ++Q P+QEL AKDLHG EWRFRHI+RGQPRRHLL
Sbjct: 1   ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GWSVFV  K LV+GDA +FLR ENGELR+G+RRA RQQ  VPSSV+SS SMHLGVLA 
Sbjct: 61  TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           A +AVST +MF ++Y PR SP+EFI+PY +Y++S     SIGMRFKMRFE E+A E+R+T
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQPLSIGMRFKMRFETEDAAERRYT 180

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           G I GI D DP RW  SKWR L V WDE +   + ERVS W+IEP+++   L+     R 
Sbjct: 181 GIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPSISVSGLSIPSCSRI 240

Query: 397 KRPRSNMLPSSP-DSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNF 447
           KR R+N LPS+P D SV       +L  D   +  F +VLQGQE  + +  F
Sbjct: 241 KRLRTN-LPSTPVDFSV---PDGGRL-YDFGESVRFQKVLQGQEMMSFKTPF 287


>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
          Length = 831

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 177/386 (45%), Positives = 232/386 (60%), Gaps = 58/386 (15%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P  G RV YFPQGH EQV ASTN+  +  +P Y +LP++++C+
Sbjct: 27  CLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQ 86

Query: 103 VINVQLKAEPDTDEVFAQVTLLP-----------ESNQDENAVEKEPPPPPPPRFHVHS- 150
           + +V + A+ +TDEV+AQ+TL P           +    E  ++++     P    + S 
Sbjct: 87  LHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSK 146

Query: 151 -----FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
                FCKTLTASDTSTHGGFSV RR A+   PPLD ++QPP QEL A+D+H  EW+FRH
Sbjct: 147 QPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRH 206

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
           IFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA R Q  +PSSV+S
Sbjct: 207 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLS 266

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           S SMH+G+LA A HA +T + FT++Y P                                
Sbjct: 267 SDSMHIGLLAAAAHAAATNSRFTIFYNP-------------------------------- 294

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
                   R+ GTI  + DADP RW  S WR +KV WDE++   RP RVSLW+IEP    
Sbjct: 295 --------RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTF 346

Query: 386 PALNSLPMPRPKRPRSNMLPSSPDSS 411
           P   SL   R K P  + + S  D S
Sbjct: 347 PMYPSLFPLRVKHPWYSGVASLHDDS 372


>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
          Length = 975

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 176/372 (47%), Positives = 230/372 (61%), Gaps = 40/372 (10%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           + +ELWHACAGPLV++P  G  V YFPQGH EQ                           
Sbjct: 33  INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQF-------------------------- 66

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            + +K   + D+   +   L E         K+P P          FCKTLTASDTSTHG
Sbjct: 67  -LDIKLTVNGDQYGKEALQLSE------LALKQPRP------QTEFFCKTLTASDTSTHG 113

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSV RR A++  PPLD S QPP QE+ A+DLH N W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 114 GFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFV 173

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           S KRL+AGD+ IF+R E  +L +G RRA RQ  N+ SSV+SS SMH+G+LA A HA +  
Sbjct: 174 SGKRLLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANN 233

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           + FT++Y PR SP+EF+VP+ +Y +++  N  S+GMRF+M FE EE   +R+ GTI GI 
Sbjct: 234 SPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGIS 293

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
           D DP RW++S+WR ++V WDE++   R  RVS+W+IEP  AP  +   P    KRPR   
Sbjct: 294 DLDPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGSKRPRQLD 353

Query: 404 LPSSPDSSVLTR 415
             SS   ++L R
Sbjct: 354 DESSEMENLLKR 365


>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
          Length = 680

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 168/411 (40%), Positives = 238/411 (57%), Gaps = 17/411 (4%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           DP  A+  ELWHACAG  V +PR G  V Y PQ H+         ++    P   +P  +
Sbjct: 12  DPAGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPP--RVPPHV 69

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP---------PRFHVHS 150
           +CRV++V+L+A+  TDEV+A++ L+         +                   +   H 
Sbjct: 70  VCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHM 129

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+RGQ
Sbjct: 130 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQ 189

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS F++ K+LV+GDA +FLRG +GELR+GVRRA++ +       ++     
Sbjct: 190 PRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSK 249

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           L +L+   +++   ++F + + PR   SEFIVPY ++++S+   +S+G RFK+  E E+A
Sbjct: 250 LLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDA 309

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-N 389
            E+ F G I+GI + DP  W  SKW+ L ++WD  +      RVS W IE   +  ++ +
Sbjct: 310 NERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTH 368

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            L     KR +    PS  D+ +L   G      D      F RVLQGQE 
Sbjct: 369 RLSSSVSKRTKLCFPPSDLDTPILDGNGRP----DSVETERFHRVLQGQEL 415


>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
 gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
          Length = 680

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 173/426 (40%), Positives = 246/426 (57%), Gaps = 19/426 (4%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           DP  A+  ELWHACAG  V +PR G  V Y PQ H+               P   +P  +
Sbjct: 12  DPAGAVCPELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGGLAPAPP--RVPPHV 69

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLP---------ESNQDENAVEKEPPPPPPPRFHVHS 150
           +CRV++V+L+A+  TDEV+A++ L+             + E    +E       +   H 
Sbjct: 70  VCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHM 129

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+RGQ
Sbjct: 130 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQ 189

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS F++ K+LV+GDA +FLRG +GELR+GVRRA++ +       ++     
Sbjct: 190 PRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSK 249

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           L +L+   +++   ++F + + PR   SEFIVPY ++++S+  ++S+G RFK+  E E+A
Sbjct: 250 LLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDA 309

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-N 389
            E+ F G I+GI + DP  W  SKW+ L ++WD  +      RVS W IE   +  ++ +
Sbjct: 310 NERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTH 368

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF--STLRGNF 447
            L     KR +    PS  D+ +L   G      D      F RVLQGQE   S++ G  
Sbjct: 369 RLSSSVSKRTKLCFPPSDLDTPILDGNGRP----DSVETERFHRVLQGQELVHSSIHGTA 424

Query: 448 AERESN 453
               S+
Sbjct: 425 CSHSSD 430


>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
          Length = 680

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 168/411 (40%), Positives = 237/411 (57%), Gaps = 17/411 (4%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           DP  A+  ELWHACAG  V +PR G  V Y PQ H+         ++    P   +P  +
Sbjct: 12  DPAGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPP--RVPPHV 69

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP---------PRFHVHS 150
           +CRV++V+L+A+  TDEV+A++ L+         +                   +   H 
Sbjct: 70  VCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHM 129

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+RGQ
Sbjct: 130 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQ 189

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS F++ K+LV+GDA +FLRG +GELR+GVRRA++ +       ++     
Sbjct: 190 PRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSK 249

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           L +L+   +++   ++F + + PR   SEFIVPY ++++S+   +S+G RFK+  E E+A
Sbjct: 250 LLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDA 309

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-N 389
            E+ F G I+GI + DP  W  SKW+ L ++WD  +      RVS W IE   +   + +
Sbjct: 310 NERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVLVTH 368

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
            L     KR +    PS  D+ +L   G      D      F RVLQGQE 
Sbjct: 369 RLSSSVSKRTKLCFPPSDLDTPILDGNGRP----DSVETERFHRVLQGQEL 415


>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
          Length = 687

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 172/410 (41%), Positives = 239/410 (58%), Gaps = 32/410 (7%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGP V +PR G  + Y PQ H+    A              +P  + CRV+ V+
Sbjct: 23  ELWHACAGPGVALPRRGSALVYLPQAHLA---ADGGGGEVPPAGAAAVPPHVACRVVGVE 79

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENA-----------------VEKEPPPPPPPRFHVHS 150
           L+A+  TDEV+A++ L+ E    +                    EK+P  P       H 
Sbjct: 80  LRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMP-------HM 132

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD     P+QEL A DLHG +W+FRHI+RGQ
Sbjct: 133 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQ 192

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL  GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA++ +       ++S    
Sbjct: 193 PRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSK 252

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           L +L++   ++   ++F + + PR+  SEFIVPY + ++S+ + +SIGMRF++ +E E+A
Sbjct: 253 LRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDA 312

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            E R  G I GI + DP RW  S+W+CL VRWD+++      RVS W+IE      ++  
Sbjct: 313 NE-RSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTH 371

Query: 391 LPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
                 KR + +    S D+  L   G    + D      F RVLQGQEF
Sbjct: 372 SLSSGSKRTKLHFPQGSLDTPFLNGNG----HPDSMGTENFHRVLQGQEF 417


>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
          Length = 1096

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 186/396 (46%), Positives = 238/396 (60%), Gaps = 38/396 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINV 106
           ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +LPS++LC + NV
Sbjct: 29  ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 88

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 166
            L A+P+TDEV+AQ+TL P    D+ ++ +        +     FCKTLTASDTSTHGGF
Sbjct: 89  TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGF 148

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV RR A++  PPLD S QPP QEL AKDLH N W FRHI+RG                 
Sbjct: 149 SVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRG----------------- 191

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTM 286
                       R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 192 ------------RDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSP 239

Query: 287 FTVYYKPRTSPSEFIVPYDQYMES-IKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 345
           FTV+Y PR SPSEF++P  +Y ++   N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 240 FTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 299

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLP 405
           DP RW++S+WR L+V WDE++   R  RVS+W+IEP  AP  +   P  R KRPR   +P
Sbjct: 300 DPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGMP 359

Query: 406 ---SSPDSSVLTRE----GSSKLNVDPSSATGFSRV 434
              SS   ++  R     G      DP +  G S V
Sbjct: 360 DDESSDLENLFKRTMPWLGDDICMKDPQAVHGLSLV 395


>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
          Length = 552

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 179/410 (43%), Positives = 229/410 (55%), Gaps = 79/410 (19%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V YFPQGH+EQ      Q       +Y LP  + CR+++V+
Sbjct: 51  ELWHACAGPLISLPKRGSLVLYFPQGHLEQ------QAPGFSAAIYGLPPHVFCRILDVK 104

Query: 108 LKAEPDTDEVFAQVTLLPES------------------NQDENAVEKEPPPPPPPRFHVH 149
           L AE DTDEV+AQV+LLPES                  +Q++  V K    P       H
Sbjct: 105 LHAETDTDEVYAQVSLLPESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTP-------H 157

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++C PPLD S+  P+QEL A+DLHG EWRFRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QPRRHLL +GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA + +G    S   + + 
Sbjct: 218 QPRRHLLTTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASAFSAQYNQNT 277

Query: 270 HLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
           +    +   HA+ST + F +YY P++                                  
Sbjct: 278 NHNNFSEVAHAISTNSAFNIYYNPKS---------------------------------- 303

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
                  G I GI D DP RW  SKWRCL VRWD+       +RVS W+IEP+ +  +  
Sbjct: 304 ------LGIITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEPSGSISSSG 357

Query: 390 SLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           S     PKR R    P  P S     EG    + + S    F RVLQGQE
Sbjct: 358 SFMTTGPKRSRIG-FPDIPVS-----EGIHATDFEESLR--FQRVLQGQE 399


>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
          Length = 744

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 172/361 (47%), Positives = 231/361 (63%), Gaps = 27/361 (7%)

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESN---QDENAV-------EKEPPPPPPPRFH 147
           +I+CRV++V+L+AE   DE++AQV+LL E      DE+ V       E         R  
Sbjct: 1   QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
            H FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDL+G  WRFRHI+
Sbjct: 61  PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIY 120

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ-QGNVPSSVISS 266
           RGQPRRHLL +GWS F + K+L  GDA +FLR ++GELR+G+RRA RQ Q  VP + +  
Sbjct: 121 RGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLC 180

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFE 326
               + +L+    A+S   +F +YY PR SP+EF+VPY +Y+ S  + +S+GMR K+R E
Sbjct: 181 QLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVE 240

Query: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
            E+A E+R+TG I G+ D DP RW +SKWRCL VRWD+ +     +RVS W+IE +    
Sbjct: 241 TEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSLVS 300

Query: 387 ALNSLPMPRPKRPRSNMLPSS------PDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           + +       KRP+ N  PS       PD S L+  GS++       ++ F +VLQGQE 
Sbjct: 301 SFSFPLKSTSKRPKMN-FPSIITDIPLPDGSGLS--GSTE-------SSRFQKVLQGQEI 350

Query: 441 S 441
           S
Sbjct: 351 S 351


>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 632

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 168/361 (46%), Positives = 228/361 (63%), Gaps = 18/361 (4%)

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPES---------NQDENAVEKEPPPPP 142
           V  +P  + CRV++V L+A+P TDEV+AQV+LL ++          + E A + +     
Sbjct: 29  VAAVPPHVFCRVVDVNLQADPATDEVYAQVSLLVDNEEAKRRMRQGESEEACDGDGEDTG 88

Query: 143 PPRFHV---HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGN 199
             +      H FCKTLTASDTSTHGGFSV RR A++C PPLD + Q P+QEL AKDLHG 
Sbjct: 89  AAKRRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDLHGT 148

Query: 200 EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNV 259
           EWRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRGE+G L++GVRRA + +   
Sbjct: 149 EWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQLKNVS 208

Query: 260 PSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGM 319
           P   + +    L  L    HAV+  ++F +YY PR   SEFIVPY ++M S    +S+GM
Sbjct: 209 PFPALFNQDSSLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGM 268

Query: 320 RFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKI 379
           RFKM++E E+A E+R TG I G  ++D +    SKW+CL VRWD+     R  RVS W+I
Sbjct: 269 RFKMKYENEDASERRSTGMITGSRESDLKS-HGSKWKCLVVRWDDDVECRRLNRVSPWEI 327

Query: 380 EPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           E A    + + L  P  KR +  +   +PD  +L   GS  ++ D + +  F +VLQGQE
Sbjct: 328 ELA-GSVSGSHLSSPHSKRLKPCLPQVNPD--MLLPSGS--VSSDFAESARFHKVLQGQE 382

Query: 440 F 440
            
Sbjct: 383 L 383


>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
          Length = 1183

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 166/345 (48%), Positives = 214/345 (62%), Gaps = 48/345 (13%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++ +ELWHACAGPLV++P  G  V YFPQGH EQ +A                       
Sbjct: 89  SINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQADA----------------------- 125

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
                    +TDEV+AQ+TL P    D+ A+          R  V  FCKTLTASDTSTH
Sbjct: 126 ---------ETDEVYAQMTLQP---YDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTH 173

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV RR A++  PPLD S QPP QE+ A+DLH N W FRHI+RGQP+RHLL +GWSVF
Sbjct: 174 GGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVF 233

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           VS+KRL AGD+ +F+R E  +L +G+RRA RQQ  + SSVIS  SMH+G+LA A HA + 
Sbjct: 234 VSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAAN 293

Query: 284 GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
            + FT++Y PR SPSEF++P  +Y +++    S+GMRF+M FE EE+  +R+ GTI GI 
Sbjct: 294 NSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI- 352

Query: 344 DADPQRWRDSKWRCL---KVRWDETSTIPRPERVSLWKIEPALAP 385
                    S+ RC    K    + S   RP RVS+W+IEP + P
Sbjct: 353 ---------SELRCCAMEKFTMAQPSAGERPSRVSIWEIEPVVTP 388


>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
          Length = 658

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 164/342 (47%), Positives = 220/342 (64%), Gaps = 18/342 (5%)

Query: 114 TDEVFAQVTLLPESNQDENAV-----------EKEPPPPPPPRFHVHSFCKTLTASDTST 162
           TDEV+AQV+L+ ++ + E  +           E E     P R   H FCKTLTASDTST
Sbjct: 40  TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARI-PHMFCKTLTASDTST 98

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++C PPLD S Q P QEL AKDLHG EWRFRHI+RGQPRRHLL +GWS 
Sbjct: 99  HGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSG 158

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           F++ K+LV+GDA +FLRGE+GELR+GVRRA + +   P   + +   +   L+   HAV+
Sbjct: 159 FINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVA 218

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 342
             ++F +YY PR S SEFI+PY ++M S    +S+GMRFK+R+E E+A E+R TG I+G 
Sbjct: 219 VKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGS 278

Query: 343 EDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSN 402
            +ADP  W  SKW+CL V+WD+     RP  VS W+IE +    + + L  P  KR +S 
Sbjct: 279 READPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIELS-GSVSGSHLSTPHSKRLKSC 336

Query: 403 MLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
               +PD  ++   GS  ++ D + +  F +VLQGQE   L+
Sbjct: 337 FPQVNPD--IVLPNGS--VSSDFAESARFHKVLQGQELLGLK 374


>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
 gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
          Length = 688

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 165/411 (40%), Positives = 236/411 (57%), Gaps = 20/411 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+  ELWHACAGP+V +PR G  V Y PQGH+    A    VA       DLP  + CRV
Sbjct: 20  AVCRELWHACAGPVVALPRRGSLVVYLPQGHL--AAAGGGNVA------VDLPPHVACRV 71

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH---------VHSFCKT 154
            +V+L A+  TDEV+A++ L+ E       +                      +H FCKT
Sbjct: 72  ADVELCADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKSRMLHMFCKT 131

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LTASDTSTHGGFSV RR A++C PPLD ++  P+QEL AKDLHG +W+FRHI+RGQPRRH
Sbjct: 132 LTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRH 191

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVL 274
           LL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +        S  S     L
Sbjct: 192 LLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFSCDSTKRHTL 251

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
                ++   ++F + Y PR + SE+I+P+ ++++S+   + IG R  ++   E+  E+R
Sbjct: 252 LAVADSLKHKSVFHISYNPRATASEYIIPHHKFLKSLNLPFCIGARINLQCHNEDVSERR 311

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
            +G +V + + DP +W  SKWR L VRW++       +RVS W+IE A    ++      
Sbjct: 312 -SGMVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIEIAGGSVSVAHSVSA 370

Query: 395 RPKRPRSNMLP-SSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
              + R+ + P  + D   +   G+     D      F RVLQGQ+  + R
Sbjct: 371 SSSK-RTKLCPQGNLDVPTMYVTGNGNGCTDSVETGKFPRVLQGQDLMSFR 420


>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
          Length = 668

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 178/425 (41%), Positives = 245/425 (57%), Gaps = 23/425 (5%)

Query: 25  GQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ 84
           G + N+T SG +        +  +LWHACAGP+V++PR G  V Y PQGH+    A    
Sbjct: 2   GIDLNNTASGGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGI 61

Query: 85  VADQQMPVYDLPSKILCRVINVQL-KAEPDTDEVFAQVTL---LPESNQDENAVEKEPPP 140
             +  +    LP  + CRV++V+L  +EP +  V   + L   L     +     ++   
Sbjct: 62  RGEVAVA---LPPHVACRVVDVELCVSEPLSLVVGFSLYLRGTLHGGGIEREDDMEDGDE 118

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
               R  +H FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +
Sbjct: 119 ERKSRM-LHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAK 177

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 260
           WRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + +    
Sbjct: 178 WRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAI 237

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
               SS S  +  L+    ++  G++F + Y PR + SE++VPY ++++S  +   IGMR
Sbjct: 238 FKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMR 297

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           FK  FE E+  E+R +G I G+ + DP RW  SKWR L VRW++ +      RVS W+IE
Sbjct: 298 FKFHFESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE 356

Query: 381 PALAPPAL-NSLPMPRPKR----PRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVL 435
                 ++ +SL     KR    P+ N+     D   L   G      D      F RVL
Sbjct: 357 IVGGSISVAHSLSASSSKRTKLCPQGNL-----DVPALYGNGRP----DSVETEKFPRVL 407

Query: 436 QGQEF 440
           QGQE 
Sbjct: 408 QGQEL 412


>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
 gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
          Length = 1031

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 157/297 (52%), Positives = 205/297 (69%), Gaps = 4/297 (1%)

Query: 108 LKAEPDTDEVFAQVTLLPESNQ---DENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           ++A+PDTDEV+A++TL P SN    D+  +          R     FCKTLTASDTSTHG
Sbjct: 1   MEADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHG 60

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSV RR A+   P LD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 61  GFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFV 120

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
           S KRL+AGD+ +F+R    +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  
Sbjct: 121 SGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANN 180

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIK-NNYSIGMRFKMRFEGEEAPEQRFTGTIVGIE 343
           + FT+YY PR S SEF++P+ +Y +++  N  S+GMRF+M FE EE+  +R+ GTI GI 
Sbjct: 181 SQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGIS 240

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           D DP RW+ S WR ++V WDE +   R  RVSLW+IEP +AP  +   P+   KRPR
Sbjct: 241 DLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPR 297


>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
          Length = 479

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/336 (42%), Positives = 205/336 (61%), Gaps = 59/336 (17%)

Query: 27  NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVA 86
           N+    SG+  +    M  Y +LW+ CAGPL  +P+ GE+VYYFPQGHIE +E ST    
Sbjct: 2   NAQPELSGIIDITKTYM--YEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDEL 59

Query: 87  DQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF 146
           D   P++DLPSK+ CRV+ +  K + +TDEV+AQ++L+P++                   
Sbjct: 60  DHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTT------------------ 101

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
                                             DMS+   TQ L AKDL+G EW F+H+
Sbjct: 102 ----------------------------------DMSQPISTQNLVAKDLYGQEWSFKHV 127

Query: 207 FRGQPRRHLLQSG--WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           FRG P+RH+  SG  WSVF ++KRL+ GD F+ LRGENGELR G+RRA  QQG++PSSVI
Sbjct: 128 FRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVI 187

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
           S++ M  GV+A+  +A  T  MF V YKP  S S+F++ YD++++++ NNY +G RF+M+
Sbjct: 188 SANCMQHGVIASVVNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYIVGSRFRMQ 245

Query: 325 FEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKV 360
           FEG++  E+R+ GTI+G+ D  P  W+DS+WR LK+
Sbjct: 246 FEGKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKI 280


>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
          Length = 686

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/415 (39%), Positives = 235/415 (56%), Gaps = 38/415 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGP+V +PR G  V Y PQGH+                   LP  ++CRV +V+
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADVE 75

Query: 108 LKAEPDTDEVFAQVTLLPESN-----------------QDENAVEKEPPPPPPPRFHVHS 150
           L A+  TDEV A++ L+ E                   +D +A  K           +H 
Sbjct: 76  LCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSG--------MLHM 127

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD ++  P+QEL AKDLHG +W+FRHI+RGQ
Sbjct: 128 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQ 187

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +        +S S  
Sbjct: 188 PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTK 247

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
              L     ++   ++F + Y PR + SE+I+PY ++++S+ +   IG R   +   E+ 
Sbjct: 248 RHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDV 307

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            E+R +G +V I + DP +W  SKWR L VRW++ +     +RVS W+IE A    +++ 
Sbjct: 308 SERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIAGGSVSVSH 366

Query: 391 LPMPRPKRPRSNMLP-SSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
                  + R+ + P  + D   +   G+     D        RVLQGQE  + R
Sbjct: 367 SLSASSSK-RTKLCPQGNLDVPAMYVTGNG--CTDSMETGKLPRVLQGQELMSFR 418


>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 683

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 164/414 (39%), Positives = 232/414 (56%), Gaps = 39/414 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGP+V +PR G  V Y PQGH+                   LP  ++CRV +V+
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADVE 75

Query: 108 LKAEPDTDEVFAQVTLLPESN-----------------QDENAVEKEPPPPPPPRFHVHS 150
           L A+  TDEV A++ L+ E                   +D +A  K           +H 
Sbjct: 76  LCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSG--------MLHM 127

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD ++  P+QEL AKDLHG +W+FRHI+RGQ
Sbjct: 128 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQ 187

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +        +S S  
Sbjct: 188 PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTK 247

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
              L     ++   ++F + Y PR + SE+I+PY ++++S+ +   IG R   +   E+ 
Sbjct: 248 RHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDV 307

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
            E+R +G +V I + DP +W  SKWR L VRW++ +     +RVS W+IE A    +++ 
Sbjct: 308 SERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIAGGSVSVSH 366

Query: 391 LPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
                  + R+ + P           G +    D        RVLQGQE  + R
Sbjct: 367 SLSASSSK-RTKLCPQGNLDVPAMWNGCT----DSMETGKLPRVLQGQELMSFR 415


>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 393

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 152/352 (43%), Positives = 212/352 (60%), Gaps = 34/352 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGP+V +PR G  V Y PQGH+                   LP  ++CRV +V+
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADVE 75

Query: 108 LKAEPDTDEVFAQVTLLPESN-----------------QDENAVEKEPPPPPPPRFHVHS 150
           L A+  TDEV A++ L+ E                   +D +A  K           +H 
Sbjct: 76  LCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSG--------MLHM 127

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD ++  P+QEL AKDLHG +W+FRHI+RGQ
Sbjct: 128 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQ 187

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +        +S S  
Sbjct: 188 PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTK 247

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
              L     ++   ++F + Y PR + SE+I+PY ++++S+ +   IG R   +   E+ 
Sbjct: 248 RHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDV 307

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA 382
            E+R +G +V I + DP +W  SKWR L VRW++ +     +RVS W+IE A
Sbjct: 308 SERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIA 358


>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
          Length = 816

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 160/304 (52%), Positives = 206/304 (67%), Gaps = 9/304 (2%)

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS 167
           + A+ +TDEV+AQ+TL P S Q+            P R   + FCKTLTASDTSTHGGFS
Sbjct: 1   MHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFS 60

Query: 168 VLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSK 227
           V RR A++  PPLD S QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +GWSVFVS+K
Sbjct: 61  VPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 120

Query: 228 RLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMF 287
           RLVAGDA +F+  E  +L +G+RRA R Q  +PSSV+SS SMHLG+LA A HA +T + F
Sbjct: 121 RLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRF 180

Query: 288 TVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTI---VGIE 343
           T+++ PR SPSEF++P  +Y++++ +   S+GMRF+M FE E    Q F  T    + + 
Sbjct: 181 TIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETE---NQVFVATWAQSLALV 237

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRPRSN 402
              P RW++S WR +KV WDE++   R  +VSLW+IEP    P   S P P R KRP   
Sbjct: 238 TWIPVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPLTTFPMYPS-PFPLRLKRPWPT 296

Query: 403 MLPS 406
            LPS
Sbjct: 297 GLPS 300


>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
          Length = 679

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 196/573 (34%), Positives = 271/573 (47%), Gaps = 138/573 (24%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           ++  ELWHACAGP++ +P++G  V YFPQGH+E V+       D Q+ + ++P  + CRV
Sbjct: 40  SVCLELWHACAGPMICLPKKGSVVVYFPQGHLELVQ-------DLQLLLPNIPPHVFCRV 92

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV----------HSFCK 153
           ++V+L AE  +DEV+ QV L+PES Q +  +++                      H FCK
Sbjct: 93  VDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTPHMFCK 152

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG---- 209
           TLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLHG EW+FRHI+RG    
Sbjct: 153 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGVSLM 212

Query: 210 ----QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
               QPRRHLL +GWS FV+ K+LV+GDA +FLR  + E  V + +              
Sbjct: 213 SHVWQPRRHLLTTGWSGFVNKKKLVSGDAVLFLRASSSEFIVPIHK-------------- 258

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
                   L +  ++ S G  F                                  +MRF
Sbjct: 259 -------FLKSLDYSYSAGMRF----------------------------------RMRF 277

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           E ++A E+R  G IVGI D DP RW  SKW+CL VRWD+     R  RVS W+IEP+ + 
Sbjct: 278 ETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDDLEAT-RNNRVSPWEIEPSGSA 336

Query: 386 PALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRG 445
              N+L     KR R  +  +  +  V    G+S    D   +  F +VLQGQE S +  
Sbjct: 337 SIPNNLMAASLKRTRIGLPSTQLEFPVPNGMGAS----DFGESLRFQKVLQGQEISGVDT 392

Query: 446 NFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFG 505
            F    +    + E    +P S        +S++   GS   +P    +  Y  +     
Sbjct: 393 TFDGINAPSHQSYELRRCYPGS----NYPGISST---GSSIRIPQMSSDVSYNSI----- 440

Query: 506 ANADPSHGFSSPFADAVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGG 565
                  GFS  F               +F  V +   ++PS P              GG
Sbjct: 441 -------GFSESF---------------RFQKVLQGQEILPSQP-------------YGG 465

Query: 566 DVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNW 598
              Y+  GN   GGFG   + +G +V  S   W
Sbjct: 466 ASGYEACGN---GGFG---VFDGYQVLRSRNGW 492


>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
          Length = 1045

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 140/247 (56%), Positives = 181/247 (73%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL AKD+H N W FRHI+RGQ
Sbjct: 8   FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQ 67

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           P+RHLL +GWSVFVS+KRL AGD+ +F+R    +L +G+RRA RQQ  + SSVISS SMH
Sbjct: 68  PKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMH 127

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
           +GVLA A HA +  + FT++Y PR +P+EF+VP  +Y +++    S+GMRF+M FE EE 
Sbjct: 128 IGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEEC 187

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
             +R+ GT+ GI D DP RW++S+WR L++ WDE++   RP RVS+W IEP L P  +  
Sbjct: 188 GVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICP 247

Query: 391 LPMPRPK 397
            P  RP+
Sbjct: 248 PPFFRPR 254


>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
          Length = 973

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/358 (43%), Positives = 198/358 (55%), Gaps = 78/358 (21%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           T G K+V      + +ELWHACAGPLV +P+ G  VYYFPQGH EQV A+T ++ + ++P
Sbjct: 29  TQGAKKV------INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIP 82

Query: 92  VY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS 150
            Y +LPS++LC+V N+ L A+ DTDEV+AQ+TL P        V  E    P P    ++
Sbjct: 83  NYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQP--------VNSETDVFPIPTLGAYT 134

Query: 151 --------FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                   FCK LTASDTSTHGGFSV RR A++  P LD S QPP QEL  +DLH N W 
Sbjct: 135 KSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWT 194

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R       + V R  +     P  
Sbjct: 195 FRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRTSPSPFVIPVARYNKATYMQP-- 252

Query: 263 VISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFK 322
                              S G  F + +                               
Sbjct: 253 -------------------SVGMRFAMMF------------------------------- 262

Query: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
              E EE+ ++R+TGT+VGI D DP RW +SKWR L+V WDE     RPERVS+W IE
Sbjct: 263 ---ETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 317


>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
 gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
          Length = 454

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 166/347 (47%), Positives = 217/347 (62%), Gaps = 27/347 (7%)

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERES 452
           MPRPKRPRSN+ PSSPDSS+LTREG++K N+DP  A+G SRVLQGQE+STLR    E  S
Sbjct: 1   MPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTE--S 58

Query: 453 NESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSH 512
            E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSH
Sbjct: 59  VECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSH 118

Query: 513 GFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDV 567
           G   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D 
Sbjct: 119 GQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDA 176

Query: 568 NYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKS 621
           + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +      +RE + K 
Sbjct: 177 SLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQ 233

Query: 622 AMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKS 679
                +E  KS++  C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    S
Sbjct: 234 PFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLS 291

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D SK SK  +D++   E  +P Q +  H KD ++KT   S+RSCTKV
Sbjct: 292 DQSKGSKSTNDHR---EQGRPFQTNNPHPKDAQTKTN--SSRSCTKV 333


>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
          Length = 648

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 137/267 (51%), Positives = 182/267 (68%), Gaps = 3/267 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL  E+W AC+G L+ VP+ GERV+YFP+ H++Q+E S+N    Q + +  LP KILCRV
Sbjct: 19  ALCREIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLEWIQGLQLSHLPRKILCRV 78

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           ++++L  E DT+EV+A+  LLP   Q+E +   E  P  PPR    SFCK LT SD  ++
Sbjct: 79  LHIRLLVEHDTEEVYAETILLPNQEQNEPST-PEFCPLEPPRPQYQSFCKALTTSDIKSN 137

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
            G SV R+ A++C PPLDM ++ PTQEL   DL GNEWRF+H+F+GQPRRHLL+ GWS F
Sbjct: 138 WGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHVFQGQPRRHLLKHGWSTF 197

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 283
           V+SK+L+AGD  +FLR E G+L VG+RR   Q  +V SS  S  SM  GVLA A HA +T
Sbjct: 198 VTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSRQSME-GVLAVASHAFAT 256

Query: 284 GTMFTVYYKP-RTSPSEFIVPYDQYME 309
            ++F+VYYKP     S+FI+    Y E
Sbjct: 257 RSLFSVYYKPCYNRSSQFIMSLSNYFE 283


>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
 gi|238014578|gb|ACR38324.1| unknown [Zea mays]
 gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 340

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 142/328 (43%), Positives = 197/328 (60%), Gaps = 34/328 (10%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGP+V +PR G  V Y PQGH+                   LP  ++CRV +V+
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADVE 75

Query: 108 LKAEPDTDEVFAQVTLLPESN-----------------QDENAVEKEPPPPPPPRFHVHS 150
           L A+  TDEV A++ L+ E                   +D +A  K           +H 
Sbjct: 76  LCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSG--------MLHM 127

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTLTASDTSTHGGFSV RR A++C PPLD ++  P+QEL AKDLHG +W+FRHI+RGQ
Sbjct: 128 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQ 187

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 270
           PRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +        +S S  
Sbjct: 188 PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTK 247

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
              L     ++   ++F + Y PR + SE+I+PY ++++S+ +   IG R   +   E+ 
Sbjct: 248 RHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDV 307

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCL 358
            E+R +G +V I + DP +W  SKWR L
Sbjct: 308 SERR-SGVVVRISEIDPMKWPGSKWRSL 334


>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
          Length = 540

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 141/336 (41%), Positives = 201/336 (59%), Gaps = 49/336 (14%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L  +L   CAGPL   P+ GE++             S N    Q  P++D+PSKI C V 
Sbjct: 23  LNGQLLKLCAGPLFDTPKVGEKLV-----------TSINDELCQLKPIFDIPSKICCNVF 71

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           ++ LK E +T++++A+V LLP    D + VE   P       +++ F K L+ASDT   G
Sbjct: 72  SINLKVENNTNDIYAEVALLP----DTSDVEIPIPKNENNIQNINYFTKVLSASDTCKTG 127

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GF + +RHA ECLP LDMS+  P+QE+ AKD+HG++W F+H                   
Sbjct: 128 GFVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHT------------------ 169

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
                        LRGENGE RVG+ RA  Q+ N+P+S IS  SMH GV+ATA + +   
Sbjct: 170 -------------LRGENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATALNTIKNK 216

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
            MF V+YKPR+  S+F+V +D++++ + N +SIG +F M+FEG++  E R+ GTIVG+ D
Sbjct: 217 CMFVVFYKPRS--SQFLVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNETRYNGTIVGVGD 274

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
                W+DS+WR LKV+WD T+TIPRP++VS W+IE
Sbjct: 275 FSTH-WKDSEWRSLKVQWDGTATIPRPDKVSPWEIE 309


>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
          Length = 451

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 140/313 (44%), Positives = 200/313 (63%), Gaps = 7/313 (2%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GD ++    E+W AC+G L+ V + GERVYYFP+ H+EQ+E S+NQ   +++ + +LP K
Sbjct: 20  GDDDLC--REIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPPK 77

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE-NAVEKEPPPPPPPRFHVHSFCKTLTA 157
           ILCRV++++L  E +T+EV+A+  L+P  +Q+E  A +  P   P P+F   SFCK LT 
Sbjct: 78  ILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQ--SFCKCLTQ 135

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD  ++ G SV  + A +C PPLDM ++ P QEL AKDL GNEWRF+H  +GQPRRH L 
Sbjct: 136 SDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLT 195

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS FV+SK+L+AGD  +FLR E G+L VG+RR   Q  +V +S  S  SM + VLA A
Sbjct: 196 NGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVA 254

Query: 278 WHAVSTGTMFTVYYKP-RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA +T ++F VY KP     S+FI+   +Y E   +   +GM  +M+ E E+    R T
Sbjct: 255 SHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESEDYCHVRRT 314

Query: 337 GTIVGIEDADPQR 349
             +  I  +  Q+
Sbjct: 315 NDLEQISLSQSQQ 327


>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
 gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
          Length = 454

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 162/347 (46%), Positives = 217/347 (62%), Gaps = 27/347 (7%)

Query: 393 MPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERES 452
           MPRPKRPRSN+ PSSPDSS+LTREG++K N+DP  A+G SRVLQGQE+STLR    E  S
Sbjct: 1   MPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTE--S 58

Query: 453 NESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSH 512
            E D  E SVVW  S DD+K+DVVS S++YGSENW+   RHEP YTDLLSGFG N +PSH
Sbjct: 59  VECDAPENSVVWQSSADDDKVDVVSGSKKYGSENWMSSARHEPTYTDLLSGFGTNIEPSH 118

Query: 513 GFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDV 567
           G   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D 
Sbjct: 119 GQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDA 176

Query: 568 NYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKS 621
           + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +      +RE + K 
Sbjct: 177 SLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQ 233

Query: 622 AMVQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKS 679
                +E  KS++  C+LFGIPL +N    +  +S +N +N+ AG    Q  + +    S
Sbjct: 234 PFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQKNNLNDAAGLT--QIASPKVQDLS 291

Query: 680 DHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           D SK SK  +D++   E  +P Q +  H KD ++KT   S+RSCTKV
Sbjct: 292 DQSKGSKSTNDHR---EQGRPFQTNNPHPKDAQTKTN--SSRSCTKV 333


>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
 gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
          Length = 472

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 140/313 (44%), Positives = 200/313 (63%), Gaps = 7/313 (2%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GD ++    E+W AC+G L+ V + GERVYYFP+ H+EQ+E S+NQ   +++ + +LP K
Sbjct: 20  GDDDLC--REIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPPK 77

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE-NAVEKEPPPPPPPRFHVHSFCKTLTA 157
           ILCRV++++L  E +T+EV+A+  L+P  +Q+E  A +  P   P P+F   SFCK LT 
Sbjct: 78  ILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQ--SFCKCLTQ 135

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD  ++ G SV  + A +C PPLDM ++ P QEL AKDL GNEWRF+H  +GQPRRH L 
Sbjct: 136 SDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLT 195

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
           +GWS FV+SK+L+AGD  +FLR E G+L VG+RR   Q  +V +S  S  SM + VLA A
Sbjct: 196 NGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVA 254

Query: 278 WHAVSTGTMFTVYYKP-RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
            HA +T ++F VY KP     S+FI+   +Y E   +   +GM  +M+ E E+    R T
Sbjct: 255 SHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESEDYCHVRRT 314

Query: 337 GTIVGIEDADPQR 349
             +  I  +  Q+
Sbjct: 315 NDLEQISLSQSQQ 327


>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 595

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 163/381 (42%), Positives = 211/381 (55%), Gaps = 37/381 (9%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
           VG+    L  +LWHACAG +V +P+ G +V YFPQGH EQ  A+T   +    P   +P 
Sbjct: 5   VGESVDRLDAQLWHACAGGMVQLPQVGAKVIYFPQGHGEQA-ATTPDFSASMGPSGTIP- 62

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
              CRV++V   A+ +TDEVFA++ L PE     N + +E P  PPP     SF KTLT 
Sbjct: 63  ---CRVVSVNFLADTETDEVFARMRLQPEGLHGLNDMTEEAPSSPPPE-KPASFAKTLTQ 118

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  A+   PPLD S  PP Q + AKD+HG+ W+FRHI+RG PRRHLL 
Sbjct: 119 SDANNGGGFSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLT 178

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR----QQGNVPSSVISSHSMHLGV 273
           +GWS FV+ K+LVAGDA +FLR  +GEL VGVRR+MR      G+  SS   S S   G 
Sbjct: 179 TGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSNGVSRSGSQGA 238

Query: 274 LATAWHA-----------------VSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
             T+  A                    G  F V Y PR S +EF V      +++ + + 
Sbjct: 239 STTSSFARNRARVTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDHTWY 298

Query: 317 IGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVS 375
            GMRFKM FE E++     F GTI  ++ ADP  W +S WR   V WDE   +    RVS
Sbjct: 299 AGMRFKMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVS 355

Query: 376 LWKIEPALAPPALNSLPMPRP 396
            W++E       + +LPM  P
Sbjct: 356 PWQVE------LVATLPMQLP 370


>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 158/398 (39%), Positives = 212/398 (53%), Gaps = 32/398 (8%)

Query: 21  IPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEA 80
           IP  G    S  +G          L  +LWHACAG +V +P    +V+YFPQGH E   A
Sbjct: 2   IPFLGSKEKSKEAG--------KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACA 53

Query: 81  STNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLP----ESNQDE----N 132
           S +     ++P Y     I CRV  ++  A+P++DEV+A++TL+P    ES+ D+    N
Sbjct: 54  SVDFRNYPRIPAY-----IPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGN 108

Query: 133 AVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELA 192
             E +  P         SF KTLT SD +  GGFSV R  A+   P LD +  PP Q + 
Sbjct: 109 GTESQEKPA--------SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNIL 160

Query: 193 AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA 252
           AKD+HG  W+FRHI+RG PRRHLL +GWS FV+ K+L+AGD+ +FLR ENG+L VG+RRA
Sbjct: 161 AKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRA 220

Query: 253 MRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIK 312
            R  G    S      +    +  A      G  F V Y PR S  EF V       + +
Sbjct: 221 KRGIGCSNGSFFGRVKVTAEAVIEAVRLAVNGQPFEVIYYPRASTPEFCVKSSLVKSASQ 280

Query: 313 NNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
             +  GMRFKM FE E++     F GTI  ++ ADP RW DS WR L+V WDE   +   
Sbjct: 281 IRWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPVRWPDSPWRLLQVTWDEPDLLQNV 340

Query: 372 ERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
           +RVS W +E     P+++      P++      P  PD
Sbjct: 341 KRVSPWLVELVSNMPSIHLTHFSPPRKKLR--FPQYPD 376


>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
          Length = 188

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 132/181 (72%), Positives = 148/181 (81%), Gaps = 3/181 (1%)

Query: 29  NSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ 88
           NS+ S +  VG    ALY ELWHACAGPLV VPRE ERVYYFPQGH+EQ+EAS +Q  DQ
Sbjct: 5   NSSYSSL--VGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQ 62

Query: 89  QMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV 148
           +MP ++LPSKILC+V+NV L+AEP+TDEV+AQVTLLPE +Q E     +PP P P    V
Sbjct: 63  KMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSE-ITSPDPPLPEPQSCTV 121

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PP QEL AKDLHGNEW FRHIFR
Sbjct: 122 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFR 181

Query: 209 G 209
           G
Sbjct: 182 G 182


>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
 gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
          Length = 671

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 161/415 (38%), Positives = 215/415 (51%), Gaps = 59/415 (14%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L ++LWHACAG +V +P    +V+YFPQGH E  + S +         + +P+ I C
Sbjct: 5   EKCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVD------FGHFQIPALIPC 58

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDE---------------NAVEKEPPPPPPPRF 146
           +V  ++  AEP+TDEV+A++ L P SN D                N +E +  P      
Sbjct: 59  KVSAIKYMAEPETDEVYAKIRLTPSSNSDLMFGDGCGEDSDDRLPNGIESQEKPA----- 113

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
              SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI
Sbjct: 114 ---SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHI 170

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ--QGNVPSSVI 264
           +RG PRRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA R    GN  SS  
Sbjct: 171 YRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGW 230

Query: 265 SSHSMHLGVL-------------------------ATAWHAVSTGTMFTVYYKPRTSPSE 299
           +S   + G L                           A    + G  F V Y PR S  E
Sbjct: 231 NSFGGYSGFLREDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYYPRASTPE 290

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCL 358
           F V       ++   +  GMRFKM FE E++     F GTI  ++ ADP RW +S WR L
Sbjct: 291 FCVRASAVRTAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPWRLL 350

Query: 359 KVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           +V WDE   +   +RVS W  E     PA++  P   P++     LP  PD  +L
Sbjct: 351 QVAWDEPDLLQNVKRVSPWLAELVSNMPAIHLSPFSPPRKKLR--LPQPPDFPLL 403


>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
           vinifera]
          Length = 247

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 133/224 (59%), Positives = 151/224 (67%), Gaps = 36/224 (16%)

Query: 37  RVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP 96
           ++G   +ALY ELWHAC  PLV +P E ERVYYFPQGH+E +EAS +Q  DQ+MP ++LP
Sbjct: 28  KLGTVNIALYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASMHQELDQKMPSFNLP 87

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
           SKILC+ +N                          N +             VH FCKTLT
Sbjct: 88  SKILCKXVNF-----------------------IHNCI-------------VHPFCKTLT 111

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSVLRRH DECLPPLDMS+ PP QEL AKD+HGNE  FRHIF+GQPR HLL
Sbjct: 112 ASDTSTHGGFSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPFRHIFQGQPRCHLL 171

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 260
            +GWSVFVS+KRL  GDA IFLR ENGEL VGVRR  RQ  NVP
Sbjct: 172 TTGWSVFVSTKRLAVGDALIFLRKENGELCVGVRRLTRQLNNVP 215


>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 537

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 137/294 (46%), Positives = 191/294 (64%), Gaps = 7/294 (2%)

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
           +H FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+
Sbjct: 8   LHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIY 67

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA++ +        +S+
Sbjct: 68  RGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSN 127

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEG 327
           S  +  L+   +++   ++F + Y PR + SEFI+PY ++++S+   + IGMRFK+++  
Sbjct: 128 SSKIHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLNRPFCIGMRFKIQYGS 187

Query: 328 EEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPA 387
           E+  E+R +G I GI D DP RW  SKW+ L VRW++ +      R+S W+IE      +
Sbjct: 188 EDVNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIEIVGGSVS 246

Query: 388 L-NSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF 440
           +  SL     KR +   L    +  V T  G+ +   D   A    RVLQGQE 
Sbjct: 247 IAQSLSASSSKRTK---LCPQGNVDVPTLYGNGR--PDSVGADKLPRVLQGQEL 295


>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
          Length = 588

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 193/307 (62%), Gaps = 12/307 (3%)

Query: 134 VEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAA 193
            EK+P  P       H FCKTLTASDTSTHGGFSV RR A++C PPLD     P+QEL A
Sbjct: 24  AEKKPRMP-------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIA 76

Query: 194 KDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 253
            DLHG +W+FRHI+RGQPRRHLL  GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA+
Sbjct: 77  VDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAV 136

Query: 254 RQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKN 313
           + +       ++S    L +L++   ++   ++F + + PR+  SEFIVPY + ++S+ +
Sbjct: 137 QLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNH 196

Query: 314 NYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPER 373
            +SIGMRF++ +E E+A E R  G I GI + DP RW  S+W+CL VRWD+++      R
Sbjct: 197 PFSIGMRFRVCYESEDANE-RSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNR 255

Query: 374 VSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSR 433
           VS W+IE      ++        KR + +    S D+  L   G    + D      F R
Sbjct: 256 VSPWEIERVGGSVSVTHSLSSGSKRTKLHFPQGSLDTPFLNGNG----HPDSMGTENFHR 311

Query: 434 VLQGQEF 440
           VLQGQEF
Sbjct: 312 VLQGQEF 318


>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
 gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
          Length = 587

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 140/307 (45%), Positives = 193/307 (62%), Gaps = 12/307 (3%)

Query: 134 VEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAA 193
            EK+P  P       H FCKTLTASDTSTHGGFSV RR A++C PPLD     P+QEL A
Sbjct: 23  AEKKPRMP-------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIA 75

Query: 194 KDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 253
            DLHG +W+FRHI+RGQPRRHLL  GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA+
Sbjct: 76  VDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAV 135

Query: 254 RQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKN 313
           + +       ++S    L +L++   ++   ++F + + PR+  SEFIVPY + ++S+ +
Sbjct: 136 QLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNH 195

Query: 314 NYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPER 373
            +SIGMRF++ +E E+A E R  G I GI + DP RW  S+W+CL VRWD+++      R
Sbjct: 196 PFSIGMRFRVCYESEDANE-RSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNR 254

Query: 374 VSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSR 433
           VS W+IE      ++        KR + +    S D+  L   G    + D      F R
Sbjct: 255 VSPWEIERVGGSVSVTHSLSSGSKRTKLHFPQGSLDTPFLNGNG----HPDSMGTENFHR 310

Query: 434 VLQGQEF 440
           VLQGQEF
Sbjct: 311 VLQGQEF 317


>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
 gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
          Length = 834

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/392 (42%), Positives = 228/392 (58%), Gaps = 45/392 (11%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV +P    RV YFPQGH EQV ASTN+  D  +P Y +LP +++C+
Sbjct: 20  CLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQ 79

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS------FCKTLT 156
           + +V + A+ +TDEV+AQ+TL P + Q++N       P  P    + S      FCKTLT
Sbjct: 80  LHDVTMHADVETDEVYAQMTLQPLNPQEQND------PYLPAEMGIMSKQPTNYFCKTLT 133

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMS-----------------RQPPTQELAAKDLHGN 199
           ASDTSTHGGFSV RR A+   PPL  +                 R P +     +  +  
Sbjct: 134 ASDTSTHGGFSVPRRAAERVFPPLLHAGLFGLLLQITGGIVCRQRIPLSSRQRQELRNPG 193

Query: 200 EWRFRHIFRG----QPRRHLLQSG--WSVFVSSKRL-----VAGDAFIFLRGENGELRVG 248
            W  R + R     +P R  +++G  W V  + +R      V G     L  E  +L +G
Sbjct: 194 SWNGRALARKSRTEKPCR-TIETGRCWIVGTAQRRTGWPCGVPGGPG--LGNEKNQLLLG 250

Query: 249 VRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYM 308
           +RRA R Q  +PSSV+SS SMH+G+LA A HA +T + FT+++ PR SPSEF++P  +Y+
Sbjct: 251 IRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYI 310

Query: 309 ESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETST 367
           +++     S+GMRF+M FE EE+  +R+ GTI  + DADP RW  S WR +KV WDE++ 
Sbjct: 311 KAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTA 370

Query: 368 IPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
             RP RVSLW+IEP    P   SL   R K P
Sbjct: 371 GERPPRVSLWEIEPLTTFPMYPSLFPLRVKHP 402


>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
          Length = 585

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 137/308 (44%), Positives = 192/308 (62%), Gaps = 8/308 (2%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+R
Sbjct: 33  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYR 92

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQPRRHLL +GWS F++ K+LV+GDA +FLRG +GELR+GVRRA++ +       ++   
Sbjct: 93  GQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTD 152

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
             L +L+   +++   ++F + + PR   SEFIVPY ++++S+  ++S+G RFK+  E E
Sbjct: 153 SKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENE 212

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           +A E+ F G I+GI + DP  W  SKW+ L ++WD  +      RVS W IE   +  ++
Sbjct: 213 DANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSV 271

Query: 389 -NSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF--STLRG 445
            + L     KR +    PS  D+ +L   G      D      F RVLQGQE   S++ G
Sbjct: 272 THRLSSSVSKRTKLCFPPSDLDTPILDGNGRP----DSVETERFHRVLQGQELVHSSIHG 327

Query: 446 NFAERESN 453
                 S+
Sbjct: 328 TACSHSSD 335


>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
 gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
          Length = 669

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/407 (38%), Positives = 216/407 (53%), Gaps = 44/407 (10%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L ++LWHACAG +V +P    +V+YFPQGH E  + S       +   + +P+ I C
Sbjct: 5   EKCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSV------EFGHFQIPALIPC 58

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHV--------HSFCK 153
           +V  ++  A+P+TDEV+A++ L+P +N D   +          R H          SF K
Sbjct: 59  KVSAIKYMADPETDEVYAKIRLIPLNNSDL-MLGHGCGEDNDDRLHSGNESQEKPASFAK 117

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRR 177

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ-QGNVPSSVISSHSMHLG 272
           HLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA R   GN  SS  +S + + G
Sbjct: 178 HLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSG 237

Query: 273 V-------------------------LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQY 307
                                     +  A    + G  F   Y PR S  EF V     
Sbjct: 238 FFREDESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYYPRASTPEFCVKASAV 297

Query: 308 MESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETS 366
             +I+  +  GMRFKM FE E++     F GTI  ++ ADP RW +S WR L+V WDE  
Sbjct: 298 RSAIQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPD 357

Query: 367 TIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
            +   +RVS W +E     PA++  P   P++     LP  PD  +L
Sbjct: 358 LLHNVKRVSPWLVELVSNMPAIHLSPFSPPRKKLR--LPQPPDFPLL 402


>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
          Length = 336

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 138/291 (47%), Positives = 190/291 (65%), Gaps = 8/291 (2%)

Query: 170 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 229
           RR A++C PPLD  +Q P+QEL AKDLHG EW+FRHI+RGQPRRHLL +GWS FV+ K+L
Sbjct: 2   RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKL 61

Query: 230 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV--LATAWHAVSTGTMF 287
           V+GDA +FLR  +GELR+GVRRA   Q    S+ ++++S  L V  +    +A+S+   F
Sbjct: 62  VSGDAVLFLRTADGELRLGVRRAA--QAKTCSNYLAAYSQLLNVSGIVDVVNAISSTNAF 119

Query: 288 TVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADP 347
           ++ Y PR S S FI+PY ++ +++ + +S GMRFKMR E E+A EQRFTG +VG+ D DP
Sbjct: 120 SICYNPRASSSGFIIPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDP 179

Query: 348 QRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSS 407
            RW  SKWRCL VRWD+   + R  RVS W+IEP+ + P  +SL MP  KR R    P +
Sbjct: 180 VRWPGSKWRCLLVRWDDLD-VSRHNRVSPWEIEPSGSAPVSSSLVMPSAKRTRVG-FPIT 237

Query: 408 PDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTA 458
                + R+G +  +   SS   F +VLQGQE   +   +   +++   TA
Sbjct: 238 KADFPIPRDGIAVSDFGESSR--FQKVLQGQEILGINSPYGGFDAHSPRTA 286


>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
          Length = 336

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 139/291 (47%), Positives = 189/291 (64%), Gaps = 8/291 (2%)

Query: 170 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 229
           RR A++C PPLD  +Q P+QEL AKDLHG EW+FRHI+RGQPRRHLL +GWS FV+ K+L
Sbjct: 2   RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKKL 61

Query: 230 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV--LATAWHAVSTGTMF 287
           V+GDA +FLR  +GELR+GVRRA   Q    S+ ++++S  L V  +     A+S+   F
Sbjct: 62  VSGDAVLFLRTADGELRLGVRRA--AQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAF 119

Query: 288 TVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADP 347
           ++ Y PR S S FI+PY ++ +++ + +S GMRFKMR E E+A EQRFTG +VG+ D DP
Sbjct: 120 SICYNPRASSSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDP 179

Query: 348 QRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSS 407
            RW  SKWRCL VRWD+   + R  RVS W+IEP+ + P  +SL MP  KR R    P +
Sbjct: 180 VRWPGSKWRCLLVRWDDLD-VSRHNRVSPWEIEPSGSAPVSSSLVMPSAKRTRVG-FPIT 237

Query: 408 PDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTA 458
                + R+G +  +   SS   F +VLQGQE   +   F   +++   TA
Sbjct: 238 KADFPIPRDGIAVSDFGESSR--FQKVLQGQEILGISSPFVGFDAHSPRTA 286


>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
          Length = 330

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 140/347 (40%), Positives = 204/347 (58%), Gaps = 58/347 (16%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE VEAST +  ++  P  DLPSK+ CRVI
Sbjct: 1   MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 60

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH--VHSFCKTLTASDTST 162
            + LK E ++DE + ++TL+P++   +N ++   P     +F   V+SF K LTASDTS 
Sbjct: 61  AIHLKVENNSDETYVEITLMPDTTVSKN-LQVVIPTENENQFRPIVNSFTKVLTASDTSA 119

Query: 163 HGGFSVLRRHADECLPPL-----DMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
            G FSV  +HA ECLPPL     DMS+  P QEL A DLHGN+WRF+H +R         
Sbjct: 120 QGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYR--------- 170

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATA 277
                         GD  +F R                         +  SM  GV+A+A
Sbjct: 171 --------------GDVIVFAR------------------------YNIESMRHGVIASA 192

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTG 337
            HA     MF + YKPR+  S++IV ++++++++ N +++G ++ MRFE ++  E R+ G
Sbjct: 193 KHAFDNQCMFIMVYKPRS--SQYIVSHEKFLDAVNNKFNVGSKYTMRFEDDDLSETRYFG 250

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           TI+GI D  P  W+ S+WR L+V+WDE ++ PRP++VS W I+  ++
Sbjct: 251 TIIGISDFSPH-WKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMS 296


>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
 gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
          Length = 309

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 142/275 (51%), Positives = 191/275 (69%), Gaps = 2/275 (0%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV AS ++  D  +P Y  LPSK++C+
Sbjct: 20  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN-IPGYPSLPSKLICK 78

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 162
           ++++ L A+ +TDEV+AQ+TL P +  D +A+          +     FCKTLTASDTST
Sbjct: 79  LLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTST 138

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
           HGGFSV RR A++  PPLD + QPP QEL AKDLH   W+FRHI+RGQP+RHLL +GWSV
Sbjct: 139 HGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSV 198

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FVS+KRL+AGD+ +F+R E  +L +G+RRA R Q  + SSV+SS SMH+G+LA A HA +
Sbjct: 199 FVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAA 258

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSI 317
             + FT++Y PR   S  I  Y   + +   +Y +
Sbjct: 259 NSSPFTIFYNPRYYSSYLISHYPNALSATLWDYEL 293


>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
 gi|194708626|gb|ACF88397.1| unknown [Zea mays]
          Length = 543

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 177/454 (38%), Positives = 240/454 (52%), Gaps = 34/454 (7%)

Query: 286 MFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 345
           MFTVYYKPRTSPSEFI+PYDQYMES+KNNYSIGMRF+MRFEGEEAPEQRFTGTIVG E+ 
Sbjct: 1   MFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLP 405
           DP  W DS WR LKVRWDE STIPRP+RVS WKIEPA +PP    +   R KRPR N+ P
Sbjct: 61  DP-LWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKRPRQNVPP 119

Query: 406 SSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWP 465
            S +SSVLT+EG++K+ +D +     + VLQGQE  TLR N  E   ++S T +K ++W 
Sbjct: 120 PSLESSVLTKEGATKVEIDSAQTQHQNSVLQGQEQMTLRNNLTESADSDS-TVQKPMMWS 178

Query: 466 PSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSP---FADAV 522
           PSL+ +        +R   +NW+P GR E  + D  S F      S  F      F  A 
Sbjct: 179 PSLNGKAH--THFQQRPAMDNWMPLGRRENDFKDTRSAFKDARTASQSFGDTQGFFVQAY 236

Query: 523 PVRKSVLD--QEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGF 580
                 L    +G  +  A P+  MP   S+ + ES+ +      D+ +    N  YG  
Sbjct: 237 DDNHHRLSFKNQGSTHRFADPYFYMPQQSSVTV-ESSTRTQTANNDLCFWGDQNAMYGNP 295

Query: 581 GDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMV--QDQEAGKSKDCKLF 638
            D     G     +  +WL  P P          R + P + +     ++  +    K+F
Sbjct: 296 SD--QQQGFNFGQNPSSWLNQPFP-----QVEQPRVVRPHATVAPFDLEKTREGSGFKIF 348

Query: 639 GIPLFSNH------VMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQ 692
           G  + +          P P +        P+  ++ + +  + +   + S S+       
Sbjct: 349 GFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVN-ELQPVQIECLPEGSVSTAGTATEN 407

Query: 693 VFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
           +        Q +   +KD++SK+Q  STRSCTKV
Sbjct: 408 I--------QQAPQSSKDIQSKSQGASTRSCTKV 433


>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 165/393 (41%), Positives = 209/393 (53%), Gaps = 49/393 (12%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
            L  +LWHACAG +V +P  G +V YFPQGH EQ  AST +     +P   +P    CRV
Sbjct: 26  GLDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQA-ASTPEFPRTLVPNGSVP----CRV 80

Query: 104 INVQLKAEPDTDEVFAQVTLLPE---SNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDT 160
           ++V   A+ +TDEVFA++ L PE   S QD        PP   P     SF KTLT SD 
Sbjct: 81  VSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKP----ASFAKTLTQSDA 136

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           +  GGFS+ R  A+   PPLD    PP Q + AKD+HG  W+FRHI+RG PRRHLL +GW
Sbjct: 137 NNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGW 196

Query: 221 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG-------- 272
           S FV+ K+LVAGDA +FLR  +GEL VGVRR+MR   N  SS   S    +G        
Sbjct: 197 STFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYALNS 256

Query: 273 --------------------------VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 306
                                     VL  A  AVS G  F V Y PR S +EF V    
Sbjct: 257 SIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVS-GERFEVVYYPRASTAEFCVKAGL 315

Query: 307 YMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDET 365
              +++ ++  GMRFKM FE E++     F GTI  ++ ADP  W  S WR L+V WDE 
Sbjct: 316 VKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVTWDEP 375

Query: 366 STIPRPERVSLWKIE-PALAPPALNSLPMPRPK 397
             +    RVS W++E  A  P  L  + +P+ K
Sbjct: 376 DLLQGVNRVSPWQLELVATLPMQLPPVSLPKKK 408


>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
 gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
          Length = 702

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/421 (37%), Positives = 213/421 (50%), Gaps = 55/421 (13%)

Query: 36  KRVGDPEM--ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           +RV + EM   L ++LWHACAG +V +P    +V+YFPQGH E    S +     ++P Y
Sbjct: 9   ERVKEKEMEKCLDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSVDFRNFPRLPPY 68

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP----PPPPRFHVH 149
                ILCRV  ++  A+P+TDEV+A++ L P  ++ EN +E E                
Sbjct: 69  -----ILCRVSGIKFMADPETDEVYAKIKLTPICSK-ENGMEDEEEGVINGGEGQENKPA 122

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG
Sbjct: 123 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRG 182

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS------- 262
            PRRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L +G+RRA R  G  P S       
Sbjct: 183 TPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGG 242

Query: 263 ---------------------------------VISSHSMHLGVLATAWHAVSTGTMFTV 289
                                            +     +    +  A    + G  F V
Sbjct: 243 NCVMPYGGFNSFFREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEV 302

Query: 290 YYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQ 348
            Y PR S  EF V       + +  +  GMRFKM FE E++     F GTI  ++ ADP 
Sbjct: 303 VYYPRASTPEFCVKASMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPL 362

Query: 349 RWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSP 408
           RW DS WR L+V WDE   +   +RVS W +E     P ++  P   P++     +P  P
Sbjct: 363 RWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKLR--MPQHP 420

Query: 409 D 409
           D
Sbjct: 421 D 421


>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/419 (37%), Positives = 214/419 (51%), Gaps = 62/419 (14%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           + E +L ++LWHACAG +V +P    +V+YFPQGH E    + +  A  ++P       +
Sbjct: 3   ETEKSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPRIPAL-----V 57

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVE--------KEPPPPPPPRFHVHSF 151
           LCRV  V+  A+P+TDEV+A++ L+P +N + +  +         E P  P       SF
Sbjct: 58  LCRVAAVKFMADPETDEVYAKIRLVPIANNELDCEDDGVMGSSGSEAPEKPA------SF 111

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG P
Sbjct: 112 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTP 171

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS------ 265
           RRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA R     P S         
Sbjct: 172 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASP 231

Query: 266 ------------SHSMHLGV----------------------LATAWHAVSTGTMFTVYY 291
                       S  M  GV                      +  A    + G  F V Y
Sbjct: 232 YAGFPKFLREDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVY 291

Query: 292 KPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRW 350
            PR S  EF V       +++  +  GMRFKM FE E++     F GTI  ++ ADP RW
Sbjct: 292 YPRASTPEFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRW 351

Query: 351 RDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
            +S WR L+V WDE   +   +RVS W +E     P ++  P   P++     +P  PD
Sbjct: 352 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPIIHLSPFSPPRKKLR--IPQHPD 408


>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
 gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
          Length = 779

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 166/410 (40%), Positives = 213/410 (51%), Gaps = 68/410 (16%)

Query: 41  PEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP---S 97
           P+  L ++LWHACAG +V +P  G +V YFPQGH EQ  A           + D P    
Sbjct: 18  PKKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA-----------IPDFPRSGG 66

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPE----------SNQDENAVEKEPPPPPPPRFH 147
            ILCRVI+V   A+ +TDEV+A++ L PE             DE  V        P    
Sbjct: 67  TILCRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKPA--- 123

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+
Sbjct: 124 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIY 181

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
           RG PRRHLL +GWS FV+ K+LVAGDA +FLR  +GEL VGVRR+MR  GN  S  IS H
Sbjct: 182 RGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSG-ISWH 240

Query: 268 SM-----HLGVLATAWHAVSTGTM------------------------FTVYYKPRTSPS 298
           S      +  +L+      S  +                         F V Y PR S +
Sbjct: 241 SSPGQSGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVYYPRASTA 300

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRC 357
           EF V       S+++++  GMRFKM FE E++     F GTI  ++ ADP RW  S WR 
Sbjct: 301 EFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRWPSSPWRI 360

Query: 358 LKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP--KRPRSNMLP 405
           L+V WDE   +    RVS W++E       +++LPM  P    PR  + P
Sbjct: 361 LQVSWDEPDLLQGVNRVSPWQVE------LVSTLPMQLPPFSLPRKKIRP 404


>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
          Length = 694

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 166/412 (40%), Positives = 215/412 (52%), Gaps = 56/412 (13%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQ---VEASTNQVADQQMPVYDL 95
           G  E  +  +LW ACAG + TVP  G  VYYFPQGH E    + A+   V      +  +
Sbjct: 13  GGAERCVDRQLWLACAGGMCTVPPVGSSVYYFPQGHAEHALGLAAAGPGVGG----LSRV 68

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLP--ESNQDENAV------EKEPPPPPPPRFH 147
           P+ + CRV  V+  A+PDTDEVFA + L+P  +  QD+ A       E E P        
Sbjct: 69  PALLPCRVAAVRYMADPDTDEVFAGIRLVPLRQDVQDDGAAAAGEDEEHEKPA------- 121

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+
Sbjct: 122 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIY 179

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA--------------- 252
           RG PRRHLL +GWS FV+ K+LVAGD+ +FLRG+ G+L VG+RRA               
Sbjct: 180 RGTPRRHLLTTGWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGW 239

Query: 253 ----------MRQQGNVPSSVISSHSMHLGV--LATAWHAVSTGTMFTVYYKPRTSPSEF 300
                     MR  GNV  S        +    +A A     +G  F V Y PR S  EF
Sbjct: 240 ENQQLYTMGPMRGGGNVSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEF 299

Query: 301 IVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLK 359
            V       +++  +  GMRFKM FE E++     F GT+ G++ ADP RW  S WR L+
Sbjct: 300 CVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQ 359

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALN---SLPMPRPKRPRSNMLPSSP 408
           V WDE   +   +RVS W +E   + PA++   S   PR K+PR    P  P
Sbjct: 360 VTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASSFSPPR-KKPRIPAYPEFP 410


>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
 gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
          Length = 835

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 165/424 (38%), Positives = 213/424 (50%), Gaps = 81/424 (19%)

Query: 41  PEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP---S 97
           P+  L ++LWHACAG +V +P  G +V YFPQGH EQ  A           + D P    
Sbjct: 59  PKKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA-----------IPDFPRSGG 107

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPE----------SNQDENAVEKEPPPPPPPRFH 147
            ILCRVI+V   A+ +TDEV+A++ L PE             DE  V        P    
Sbjct: 108 TILCRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKPA--- 164

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+
Sbjct: 165 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIY 222

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV---- 263
           RG PRRHLL +GWS FV+ K+LVAGDA +FLR  +GEL VGVRR+MR  GN  S +    
Sbjct: 223 RGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHS 282

Query: 264 ---------------ISSHSMHLGVLATAWHAVSTGTM---------------------- 286
                          I S S +  +L+      S  +                       
Sbjct: 283 SPGQRSLPQNSSRWEIKSESGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAG 342

Query: 287 --FTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIE 343
             F V Y PR S +EF V       S+++++  GMRFKM FE E++     F GTI  ++
Sbjct: 343 QAFEVVYYPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQ 402

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP--KRPRS 401
            ADP RW  S WR L+V WDE   +    RVS W++E       +++LPM  P    PR 
Sbjct: 403 PADPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVE------LVSTLPMQLPPFSLPRK 456

Query: 402 NMLP 405
            + P
Sbjct: 457 KIRP 460


>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
 gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
          Length = 681

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 158/395 (40%), Positives = 210/395 (53%), Gaps = 33/395 (8%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +  +LW ACAG + TVP  G  VYYFPQGH E        +A  ++    +P+ + C
Sbjct: 15  ERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALG----LAAPELSAARVPALVPC 70

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           RV +V+  A+PDTDEVFA++ L+P    ++  VE++            SF KTLT SD +
Sbjct: 71  RVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDAN 130

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
             GGFSV R  A+   P LD +  PP Q + AKD+HG  W FRHI+RG PRRHLL +GWS
Sbjct: 131 NGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWS 190

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR------------------QQGNVPSSV 263
            FV+ K+LVAGD+ +FLRG+ G+L VG+RRA R                  Q G +    
Sbjct: 191 TFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGN 250

Query: 264 ISSHSMHLGV-------LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
            S  +   G        L  A    + G  F V Y PR S  EF V       +++  + 
Sbjct: 251 ASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWC 310

Query: 317 IGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVS 375
            GMRFKM FE E++     F GT+  ++ ADP RW  S WR L+V WDE   +   +RVS
Sbjct: 311 PGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVS 370

Query: 376 LWKIEPALAPPALN--SLPMPRPKRPRSNMLPSSP 408
            W +E   + PA+N  S   PR K+PR    P  P
Sbjct: 371 PWLVELVSSMPAINLSSFSPPR-KKPRILAYPEFP 404


>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 709

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/412 (38%), Positives = 209/412 (50%), Gaps = 40/412 (9%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           +K VG  E  L  +LWHACAG +V +P    RVYYFPQGH E             +    
Sbjct: 22  MKEVG-AERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRP 80

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP-----PPPPPPRFHVH 149
           LP+ +LC V  V+  A+PDTDEVFA++ L+P    +    E E        PP  R  + 
Sbjct: 81  LPALVLCCVAGVRFLADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSDPPEAREKLS 140

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG  W+FRHI+RG
Sbjct: 141 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRG 200

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR--------------- 254
            PRRHLL +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RRA R               
Sbjct: 201 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAP 260

Query: 255 ----------------QQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPS 298
                             G     V     + +  +  A    +    F V Y PR S  
Sbjct: 261 GYGGFSAFLKDEENKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTP 320

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRC 357
           EF+V       +++ ++  GMRFKM FE E++     F GTI  ++ ADP RW +S WR 
Sbjct: 321 EFVVKAAAMQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRL 380

Query: 358 LKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
           L+V WDE   +   + VS W +E   + P ++  P   P++     +P  PD
Sbjct: 381 LQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSPPRKKLR--VPQHPD 430


>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
 gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
          Length = 575

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/310 (44%), Positives = 190/310 (61%), Gaps = 9/310 (2%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H FCKTLTASDTSTHGGFSV RR A++C PPLD  +  P+QEL AKDLHG +WRFRHI+R
Sbjct: 29  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYR 88

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 268
           GQPRRHLL +GWS F++ K+LV+GDA +FLRG +GELR+GVRRA++ +       ++   
Sbjct: 89  GQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRAVQLKNEALLEAVNCTD 148

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
             L +L+    ++   ++F + + PR   SEFIVPY ++++ +   +SIG RFK+  + E
Sbjct: 149 SKLLMLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLKGLNYPFSIGTRFKVGCKNE 208

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           +A E+ F G I GI + DP RW  SKW+ L V+WD  +      RVS W IE   +  ++
Sbjct: 209 DANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKYSHQNRVSPWDIERVGSSVSV 267

Query: 389 -NSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLRGNF 447
            + L     KR +      + D+ +L   G      D     GF +VLQGQE   + G  
Sbjct: 268 THCLSSCVSKRMKLCFPQGNLDAPILDGNGRP----DSVGTEGFHQVLQGQELVRVHGAA 323

Query: 448 AERESNESDT 457
               S+ SDT
Sbjct: 324 C---SHSSDT 330


>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
 gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
          Length = 690

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/401 (38%), Positives = 206/401 (51%), Gaps = 58/401 (14%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           +L  +LW ACAG +V +P     V+YFPQGH E  ++  N       P   +PS ILCRV
Sbjct: 8   SLDPQLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPVN------FP-QRIPSLILCRV 60

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQD----------ENAVEKEPPPPPPPRFHVHSFCK 153
             V+  A+PDTDEV+A++  +P  N D           N  + +  P  P      SF K
Sbjct: 61  ATVKFLADPDTDEVYAKIGFVPLPNTDLDFAHDRGLCGNGNDGDSCPDKPA-----SFAK 115

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PRR
Sbjct: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGTPRR 175

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG---------------N 258
           HLL +GWS FV+ K+LVAGD+ +FLR ENG+LRVG+RR+ R  G               N
Sbjct: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGWNSN 235

Query: 259 VPSSVISSHSMHLGV--------------------LATAWHAVSTGTMFTVYYKPRTSPS 298
             +  I      L V                    +  A    + G  F V Y PR+S  
Sbjct: 236 NATCAIPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQVVYYPRSSTP 295

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRC 357
           EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +S WR 
Sbjct: 296 EFCVKASSVRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVADPVRWPNSPWRL 355

Query: 358 LKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           L+V WDE   +   +RVS W +E     P ++  P   P++
Sbjct: 356 LQVAWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRK 396


>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
 gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/405 (37%), Positives = 211/405 (52%), Gaps = 63/405 (15%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  + ++LWHACAG +V +P    +VYYFPQGH E    + +  A  + P       ILC
Sbjct: 6   EKCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPAL-----ILC 60

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQ-------------DENAVEKEPPPPPPPRFHV 148
           RV  V+  A+P+TDEV+A++ ++P  N+             +E+   ++P          
Sbjct: 61  RVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKP---------- 110

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           +SF KTLT SD +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W+FRHI+R
Sbjct: 111 NSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYR 170

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA---------------- 252
           G PRRHLL +GWS FV+ K+LVAGD+ +FLR ENGEL VG+RRA                
Sbjct: 171 GTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNS 230

Query: 253 ---------------MRQQGNVPS---SVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR 294
                          M + GN+ S   S+     +    +  A H  S+G  F V Y PR
Sbjct: 231 GAGNYGGFSAFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPR 290

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDS 353
            +  EF V       +++  +  GMRFKM FE E++     F GTI  I+ ADP RW +S
Sbjct: 291 ANTPEFCVRASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNS 350

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            WR L+V WDE   +   + VS W +E     P ++  P   P++
Sbjct: 351 PWRLLQVAWDEPDLLQNVKHVSPWLVELVSNMPVIHLSPFSPPRK 395


>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
          Length = 681

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/395 (40%), Positives = 210/395 (53%), Gaps = 33/395 (8%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +  +LW ACAG + TVP  G  VYYFPQGH E        +A  ++    +P+ + C
Sbjct: 15  ERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALG----LAAPELSAARVPALVPC 70

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           RV +V+  A+PDTDEVFA++ L+P    ++  VE++            SF KTLT SD +
Sbjct: 71  RVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDAN 130

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
             GGFSV R  A+   P LD +  PP Q + AKD+HG  W FRHI+RG PRRHLL +GWS
Sbjct: 131 NGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWS 190

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR------------------QQGNVPSSV 263
            FV+ K+LVAGD+ +FLRG+ G+L VG+RRA R                  Q G +    
Sbjct: 191 TFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGN 250

Query: 264 ISSHSMHLGV-------LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
            S  +   G        +  A    S G  F V Y PR S  EF V       +++  + 
Sbjct: 251 ASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWC 310

Query: 317 IGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVS 375
            GMRFKM FE E++     F GT+  ++ ADP RW  S WR L+V WDE   +   +RVS
Sbjct: 311 PGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVS 370

Query: 376 LWKIEPALAPPA--LNSLPMPRPKRPRSNMLPSSP 408
            W +E   + PA  L+S   PR K+PR    P  P
Sbjct: 371 PWLVELVSSMPAIHLSSFSPPR-KKPRIPAYPEFP 404


>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
 gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
          Length = 752

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 165/416 (39%), Positives = 210/416 (50%), Gaps = 73/416 (17%)

Query: 37  RVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP 96
           R G  E  L  +LW ACAG +V +P  G ++ YFPQGH EQ  AS+        P   +P
Sbjct: 30  RGGGEEKHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQA-ASSPDFPRALGPAGTVP 88

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDEN---AVEKEPPPPPPPRFHVHSFCK 153
               CRV++V+  A+ +TDEVFA + L PES  DE+   A    P P  P      SF K
Sbjct: 89  ----CRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAALSPSPEKPA-----SFAK 139

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PRR
Sbjct: 140 TLTQSDANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRR 199

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS----- 268
           HLL +GWS FV+ K+LVAGDA +FLR  +GEL VGVRR+MR  G+  +  +  HS     
Sbjct: 200 HLLTTGWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRS 259

Query: 269 ---------MHLG--------------------------------------VLATAWHAV 281
                    M  G                                      VL  A  A 
Sbjct: 260 SSRWELRPPMDTGLSDGTLMGENGSSRSAGGGGGNGGGSFTRNRAKVTAKSVLDAATLAA 319

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIV 340
           S G  F V Y PR S +EF V       ++ + +  GMRFKM FE E++     F GTI 
Sbjct: 320 S-GKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTIS 378

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
            ++ ADP  W  S WR L+V WDE   +    RVS W++E       +++LPM  P
Sbjct: 379 AVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE------LVSTLPMQLP 428


>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 701

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 159/416 (38%), Positives = 204/416 (49%), Gaps = 60/416 (14%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L  +LWHACAG +V +P+   +V+YFPQGH E    + +           LP  ILC
Sbjct: 5   EKVLDPQLWHACAGGMVQMPQMNSKVFYFPQGHAEHAHTNIH---------LRLPPFILC 55

Query: 102 RVINVQLKAEPDTDEVFAQVTLLP----ESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
            V  V+  A P+TDEVFA+++LLP    E   D +    +    P       SF KTLT 
Sbjct: 56  NVEAVKFMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKPASFAKTLTQ 115

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  WRFRHI+RG PRRHLL 
Sbjct: 116 SDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLT 175

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR--------------------QQG 257
           +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA +                      G
Sbjct: 176 TGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVWSSASGSGNG 235

Query: 258 NVPSSVISSHSMHLG-----------------VLATAWHAVSTGTM------FTVYYKPR 294
           N         S  L                  V   A   V   T+      F V Y PR
Sbjct: 236 NCGIGPYGPFSFFLKEENKMLRNGCGGNLSGRVKVRAEDVVEAVTLAASNKPFEVVYYPR 295

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDS 353
            S  EF V       +++  +  GMRFKM FE E+A     F GTI  ++  DP RW +S
Sbjct: 296 ASTPEFCVKASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVVDPIRWPNS 355

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
            WR L+V WDE   +   +RVS W +E     P +N  P      PR  + P  PD
Sbjct: 356 PWRLLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPF---SPPRKKLRPQHPD 408


>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
           Group]
          Length = 599

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 140/319 (43%), Positives = 193/319 (60%), Gaps = 24/319 (7%)

Query: 134 VEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL------------D 181
            EK+P  P       H FCKTLTASDTSTHGGFSV RR A++C PPL            D
Sbjct: 23  AEKKPRMP-------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFND 75

Query: 182 MSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE 241
                P+QEL A DLHG +W+FRHI+RGQPRRHLL  GWS FV+ K+LV+GDA +FLRG+
Sbjct: 76  YKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGD 135

Query: 242 NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFI 301
           +G+LR+GVRRA++ +       ++S    L +L++   ++   ++F + + PR+  SEFI
Sbjct: 136 DGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFI 195

Query: 302 VPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVR 361
           VPY + ++S+ + +SIGMRF++ +E E+A E R  G I GI + DP RW  S+W+CL VR
Sbjct: 196 VPYWRLLKSLNHPFSIGMRFRVCYESEDANE-RSAGLISGISEVDPIRWPGSRWKCLLVR 254

Query: 362 WDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKL 421
           WD+++      RVS W+IE      ++        KR + +    S D+  L   G    
Sbjct: 255 WDDSTDSSHQNRVSPWEIERVGGSVSVTHSLSSGSKRTKLHFPQGSLDTPFLNGNG---- 310

Query: 422 NVDPSSATGFSRVLQGQEF 440
           + D      F RVLQGQEF
Sbjct: 311 HPDSMGTENFHRVLQGQEF 329


>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
 gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
          Length = 590

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 155/415 (37%), Positives = 215/415 (51%), Gaps = 59/415 (14%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L ++LWHACAG +V +P    RV+YFPQGH E  + + +    Q      + + I C
Sbjct: 19  EKCLDSQLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDFGRCQ------ISAMIPC 72

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD--------------ENAVEKEPPPPPPPRFH 147
           +V  ++  A+P+TDEV+A++ L+P  ++D               N  E +  P       
Sbjct: 73  KVSAIKYLADPETDEVYAKIRLIPLIDRDVFLENSGDDCDDGLYNGAESQEKPA------ 126

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG  W+FRHI+
Sbjct: 127 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIY 184

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVI 264
           RG PRRHLL +GWS FV+ K+LVAGD+ +FLR +NG+L VG+RRA R  G     PS   
Sbjct: 185 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWN 244

Query: 265 SSHSMHLGVL-------------------------ATAWHAVSTGTMFTVYYKPRTSPSE 299
           S      G L                           A    + G  F + Y PR S  E
Sbjct: 245 SFGGYAAGFLREDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYYPRASTPE 304

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCL 358
           F V       +++  +  GMRFKM FE E++     F GTI  ++ ADP RW +S WR L
Sbjct: 305 FCVRASAVRAAMQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLL 364

Query: 359 KVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           +V WDE   +   +RVS W +E     PA++  P   P++     +P +PD S++
Sbjct: 365 QVAWDEPDLLQNVKRVSPWLVELVANMPAVHLSPFSPPRKKLR--IPQTPDFSLI 417


>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
 gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
          Length = 793

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 157/404 (38%), Positives = 206/404 (50%), Gaps = 65/404 (16%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           L  +LW ACAG +V +P  G ++ YFPQGH EQ  AS+        P   +P    CRV+
Sbjct: 38  LDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQA-ASSPDFPRALGPAGTVP----CRVL 92

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           +V+  A+ +TDEVFA + L PES  DE+      P P P +    SF KTLT SD +  G
Sbjct: 93  SVKFLADKETDEVFASLRLHPESGSDEDNDRAAAPSPSPEK--PASFAKTLTQSDANNGG 150

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PRRHLL +GWS FV
Sbjct: 151 GFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 210

Query: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH----------------- 267
           + K+LVAGDA +FLR  +GEL VGVRR+MR  G+  +  +  H                 
Sbjct: 211 NHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRSSSRWELRPPMD 270

Query: 268 -SMHLGVL---------------------------ATAWHAVSTGTM------FTVYYKP 293
             +  G L                            TA   +   T+      F V Y P
Sbjct: 271 TGLSDGTLMRENGSSRSAGGGAGNGGGSFTRNRAKVTAKSVLDAATLAASGKAFEVVYYP 330

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S +EF V       ++ + +  GMRFKM FE E++     F GTI  ++ ADP  W  
Sbjct: 331 RASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISAVQAADPILWPS 390

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
           S WR L+V WDE   +    RVS W++E       +++LPM  P
Sbjct: 391 SPWRVLQVAWDEPDLLQGVSRVSPWQVE------LVSTLPMQLP 428


>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 151/405 (37%), Positives = 211/405 (52%), Gaps = 63/405 (15%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  + ++LWHACAG +V +P    +VYYFPQGH E    + +  A  + P       ILC
Sbjct: 6   EKCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPAL-----ILC 60

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQ-------------DENAVEKEPPPPPPPRFHV 148
           RV  V+  A+P+TDEV+A++ ++P  N+             +E+   ++P          
Sbjct: 61  RVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKP---------- 110

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           +SF KTLT SD +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W+FRHI+R
Sbjct: 111 NSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYR 170

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA---------------- 252
           G PRRHLL +GWS FV+ K+LVAGD+ +FLR ENGEL VG+RRA                
Sbjct: 171 GTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNS 230

Query: 253 ---------------MRQQGNVPS---SVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR 294
                          M + GN+ S   S+     +    +  A +  S+G  F V Y PR
Sbjct: 231 GAGNYGGFSAFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPR 290

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDS 353
            +  EF V       +++  +  GMRFKM FE E++     F GTI  I+ ADP RW +S
Sbjct: 291 ANTPEFCVRASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNS 350

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            WR L+V WDE   +   + VS W +E     P ++  P   P++
Sbjct: 351 PWRLLQVAWDEPDLLQNVKHVSPWLVELVSNMPVIHLSPFSPPRK 395


>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
          Length = 711

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 159/406 (39%), Positives = 212/406 (52%), Gaps = 50/406 (12%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +  +LW ACAG + TVP  G  VYYFPQGH E    +        +    +P+ + C
Sbjct: 16  ERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEH---ALGLAGAADLSAARVPALVPC 72

Query: 102 RVINVQLKAEPDTDEVFAQVTLLP----------ESNQDENAVEKEPPPPPPPRFHVHSF 151
           RV  V+  A+PDTDEVFA++ L+P             +D+ A   E   P        SF
Sbjct: 73  RVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKP-------ASF 125

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W+FRHI+RG P
Sbjct: 126 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTP 185

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR----------------- 254
           RRHLL +GWS FV+ K+LVAGD+ +FLRG++G+L VG+RRA R                 
Sbjct: 186 RRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAG 245

Query: 255 -------QQGNVP--SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYD 305
                   +GNV   ++  +   +    +A A    + G  F V Y PR S  EF V   
Sbjct: 246 WDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVRAA 305

Query: 306 QYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDE 364
               +++  +S GMRFKM FE E++     F GT+ G++  DP RW  S WR L+V WDE
Sbjct: 306 AVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDE 365

Query: 365 TSTIPRPERVSLWKIEPALAPPA--LNSLPMPRPKRPRSNMLPSSP 408
              +   +RVS W +E   + PA  L S   PR K+PR    P  P
Sbjct: 366 PDLLQNVKRVSPWLVELVSSMPAIHLASFSPPR-KKPRIPAYPEFP 410


>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
          Length = 689

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 159/406 (39%), Positives = 212/406 (52%), Gaps = 50/406 (12%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +  +LW ACAG + TVP  G  VYYFPQGH E    +        +    +P+ + C
Sbjct: 16  ERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEH---ALGLAGAADLSAARVPALVPC 72

Query: 102 RVINVQLKAEPDTDEVFAQVTLLP----------ESNQDENAVEKEPPPPPPPRFHVHSF 151
           RV  V+  A+PDTDEVFA++ L+P             +D+ A   E   P        SF
Sbjct: 73  RVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKP-------ASF 125

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W+FRHI+RG P
Sbjct: 126 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTP 185

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR----------------- 254
           RRHLL +GWS FV+ K+LVAGD+ +FLRG++G+L VG+RRA R                 
Sbjct: 186 RRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAG 245

Query: 255 -------QQGNVP--SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYD 305
                   +GNV   ++  +   +    +A A    + G  F V Y PR S  EF V   
Sbjct: 246 WDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVRAA 305

Query: 306 QYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDE 364
               +++  +S GMRFKM FE E++     F GT+ G++  DP RW  S WR L+V WDE
Sbjct: 306 AVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDE 365

Query: 365 TSTIPRPERVSLWKIEPALAPPA--LNSLPMPRPKRPRSNMLPSSP 408
              +   +RVS W +E   + PA  L S   PR K+PR    P  P
Sbjct: 366 PDLLQNVKRVSPWLVELVSSMPAIHLASFSPPR-KKPRIPAYPEFP 410


>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
 gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
          Length = 708

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/415 (39%), Positives = 217/415 (52%), Gaps = 56/415 (13%)

Query: 31  TTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM 90
            T+G +R  D       +LW ACAG + TVP  G  VYYFPQGH E    +        +
Sbjct: 11  ATAGAERCVD------RQLWLACAGGMCTVPPVGASVYYFPQGHAEH---ALGLAGTADL 61

Query: 91  PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESN--------QDENAVEKEPPPPP 142
               +P+ + CRV  V+  A+PDTDEVFA++ L+P           +D+ A E+E P   
Sbjct: 62  SAARVPALVPCRVAAVRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEKP--- 118

Query: 143 PPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                  SF KTLT SD +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W+
Sbjct: 119 ------ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWK 172

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-------- 254
           FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +FLRG++G+L VG+RRA R        
Sbjct: 173 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGG 232

Query: 255 ----------------QQGNVP--SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTS 296
                            +GNV   ++  +   +    +A A    + G  F   Y PR S
Sbjct: 233 GGEEAPSPGWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRAS 292

Query: 297 PSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKW 355
             EF V       +++  +S GMRFKM FE E++     F GT+ G++  DP RW  S W
Sbjct: 293 TPEFCVRAAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPW 352

Query: 356 RCLKVRWDETSTIPRPERVSLWKIEPALAPPA--LNSLPMPRPKRPRSNMLPSSP 408
           R L+V WDE   +   +RVS W +E   + PA  L S   PR K+PR    P  P
Sbjct: 353 RLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPR-KKPRIPAYPEFP 406


>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
 gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
 gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
 gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
 gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
 gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
          Length = 693

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/402 (38%), Positives = 212/402 (52%), Gaps = 52/402 (12%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YF QGH E   A  +  A +      +P  ILC
Sbjct: 4   EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD----ENAVEKEPPPPPPPRFHVH----SFCK 153
           RV++V+  A+ +TDEVFA++TLLP    D     +AV    PP      +      SF K
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAK 117

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG  W+FRHI+RG PRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRR 177

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA--------------------- 252
           HLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA                     
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGF 237

Query: 253 ---------------MRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSP 297
                          M++ GN   +  ++  + +  +A A    + G  F V Y PR S 
Sbjct: 238 LRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRAST 297

Query: 298 SEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWR 356
            EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +S WR
Sbjct: 298 PEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWR 357

Query: 357 CLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
            L+V WDE   +   +RVS W +E     P ++  P  PR K
Sbjct: 358 LLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKK 399


>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
 gi|223942161|gb|ACN25164.1| unknown [Zea mays]
 gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
 gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
          Length = 681

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/406 (38%), Positives = 210/406 (51%), Gaps = 48/406 (11%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L  +LWHACAG +V +P    RVYYFPQGH E                  LPS +LC
Sbjct: 7   ERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR---ALPSLVLC 63

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPES-------NQDENAVEKEPPPPPPPRFHVHSFCKT 154
            V  V+  A+P+TDEVFA++ L+P +         DE +V+     P   R  + SF KT
Sbjct: 64  SVTGVRFLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVD-----PADAREKLSSFAKT 118

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG  W+FRHI+RG PRRH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRH 178

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG---------NVP----- 260
           LL +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RR  R            N P     
Sbjct: 179 LLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGAL 238

Query: 261 --------SSVISSHS--------MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPY 304
                     ++ SH         + +  +  A    ++G  F V Y PR S  EF+V  
Sbjct: 239 SAFLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKA 298

Query: 305 DQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWD 363
                +++N +  GMRFKM FE E++     F GTI   + ADP RW +S WR L+V WD
Sbjct: 299 ASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVAWD 358

Query: 364 ETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
           E   +   + V+ W +E   + P ++  P   P++     +P  PD
Sbjct: 359 EPDLLQNVKCVNPWLVEIVSSIPPIHLGPFSPPRKKLR--VPHHPD 402


>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
 gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 703

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 158/420 (37%), Positives = 218/420 (51%), Gaps = 59/420 (14%)

Query: 38  VGDPEMA----LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           V DP M     L ++LWHACAG L+ +P    +V YFPQGH E  + + +          
Sbjct: 4   VIDPMMNHDKHLDSQLWHACAGGLIQLPTINSKVVYFPQGHTEHAQGNVD------FGNA 57

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESN-------QDENAVEKEPPPPPPPRF 146
            +PS I CRV  ++  A+P+TDEVFA++ L P +N       +D+  +  E      P  
Sbjct: 58  RIPSIIPCRVSGIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQDKPT- 116

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
              SF KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG  W+FRHI
Sbjct: 117 ---SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIWKFRHI 173

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG--------- 257
           +RG PRRHLL +GWS FV+ K+LVAGD+ +FLR E G+L +GVRRA R  G         
Sbjct: 174 YRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGIDYSPGW 233

Query: 258 ---NVPSSVIS---------------------SHSMHLGVLATAWHAVSTGTMFTVYYKP 293
              N  SS++                      S  + +  +  A    ++G  F + Y P
Sbjct: 234 NPTNSGSSLVGYSDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQSFEIVYYP 293

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
                EF+V       +++ ++   MRFKM FE E++     F GT+  I+ ADP RW D
Sbjct: 294 CAGTPEFVVKASSLRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQAADPIRWPD 353

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP-KRPRSNMLPSSPDSS 411
           S WR L+V WDE   +   + V+ W +E  +  PA++  P   P K+PR    P   DSS
Sbjct: 354 SPWRMLQVTWDEPDLLQNVKSVNPWLVEVVVNMPAIHVSPFSPPRKKPR---FPLQADSS 410


>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 697

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/410 (36%), Positives = 205/410 (50%), Gaps = 54/410 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L  +LWHACAG +V +P+   +V+YFPQGH E    + +           +P  ILC
Sbjct: 5   EKVLDPQLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTTID---------LRVPPFILC 55

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQ----DENAVEKEPPPPPPPRFHVHSFCKTLTA 157
            V  V+  A+P+TD+VFA+++L+P  N     D ++   +    P       SF KTLT 
Sbjct: 56  NVEAVKFMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKPASFAKTLTQ 115

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  WRFRHI+RG PRRHLL 
Sbjct: 116 SDANNGGGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLT 175

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA------------------------- 252
           +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA                         
Sbjct: 176 TGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSASGSGIG 235

Query: 253 ------------MRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEF 300
                       +R    V  ++     +    +  A    ++   F V Y PR S  EF
Sbjct: 236 PFSFFLKEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVYYPRASTPEF 295

Query: 301 IVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLK 359
            V       +++  +  GMRFKM FE E+A     F GTI  ++  DP  W +S WR L+
Sbjct: 296 CVKASSVGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICWPNSPWRLLQ 355

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
           V WDE   +   +RVS W +E     P +N  P      PR  + P  PD
Sbjct: 356 VTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPF---SPPRKKLRPQHPD 402


>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
          Length = 647

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/436 (38%), Positives = 227/436 (52%), Gaps = 85/436 (19%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L  +LWHACAG +V +P    +V+YFPQGH E    + + V  + +P+   P  +LC
Sbjct: 13  EKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN---AYDHVDFKNLPI---PPMVLC 66

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDE-------------NAVEKEPPPPPPPRFHV 148
           RV+ ++  A+P++DEVFA++ L+P  + D              N  EK P          
Sbjct: 67  RVLAIKYMADPESDEVFAKLKLIPLKDNDHEYRDGEESNGLGSNNSEKTP---------- 116

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
            SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+R
Sbjct: 117 -SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYR 175

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ------------ 256
           G PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA R              
Sbjct: 176 GTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGW 235

Query: 257 ---GNVPSSVI------SSHSMH--------LGVLATAWHAVSTGTMFTVYYKPRTSPSE 299
              G   SS++      SS S+           V+  A  AVS G  F V Y PR S SE
Sbjct: 236 NPIGGSYSSLLRDDERRSSSSLADRKGKVTAESVVEAAKLAVS-GRGFEVVYYPRASSSE 294

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCL 358
           F V       +++  +  GMRFKM FE E++     F GT+  +  +DP RW +S WR L
Sbjct: 295 FCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLL 354

Query: 359 KVRWDETSTIPRPERVSLWKIE---------PALAPPALNSLPMPRPKRPRSN------- 402
           +V WDE   +   +RV+ W +E         P+ +PP      M  P+ P  N       
Sbjct: 355 QVAWDEPDLLQYVKRVNPWLVELVSNVHPIIPSFSPPRKK---MRLPQHPDYNTRISVPS 411

Query: 403 -----MLPSSPDSSVL 413
                ++ SSP SSVL
Sbjct: 412 FASNPLIRSSPLSSVL 427


>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 158/416 (37%), Positives = 216/416 (51%), Gaps = 68/416 (16%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDL 95
           +++ + E  L  +LWHACAG +V +P    RV+YFPQGH E    S   V  +  P   +
Sbjct: 9   EKLKEVEKCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEH---SCAPVDFRNCP--KV 63

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE----------NAVEKEPPPPPPPR 145
           PS  LCRV  ++  A+PDTDEVFA++ L+P +  +           N  E++ P      
Sbjct: 64  PSYTLCRVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPT----- 118

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
               SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRH
Sbjct: 119 ----SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRH 174

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI- 264
           I+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA R  G+ P S   
Sbjct: 175 IYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCG 234

Query: 265 ----------------------------SSHSMH-----LG-------VLATAWHAVSTG 284
                                       S++ M+     +G        +  A    S G
Sbjct: 235 WNPAGGNCAVSYGAFSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNG 294

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIE 343
             F + + PR S  EF V       +++  +  GMRFKM FE E++     F GTI  ++
Sbjct: 295 QPFEIIFYPRASTPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQ 354

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE--PALAPPALNSLPMPRPK 397
            +DP RW +S WR L+V WDE   +   +RVS W +E   +++P  L     PR K
Sbjct: 355 VSDPLRWPESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKK 410


>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 163/441 (36%), Positives = 218/441 (49%), Gaps = 75/441 (17%)

Query: 21  IPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEA 80
           IP  G    S  +G          L  +LWHACAG +V +P    +V+YFPQGH E   A
Sbjct: 2   IPFLGSKEKSKEAG--------KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACA 53

Query: 81  STNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLP----ESNQDE----N 132
           S +     ++P Y     I CRV  ++  A+P++DEV+A++TL+P    ES+ D+    N
Sbjct: 54  SVDFRNYPRIPAY-----IPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGN 108

Query: 133 AVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELA 192
             E +  P         SF KTLT SD +  GGFSV R  A+   P LD +  PP Q + 
Sbjct: 109 GTESQEKPA--------SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNIL 160

Query: 193 AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA 252
           AKD+HG  W+FRHI+RG PRRHLL +GWS FV+ K+L+AGD+ +FLR ENG+L VG+RRA
Sbjct: 161 AKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRA 220

Query: 253 MRQQGNVPSS------VISSHSMHLG-------------------------------VLA 275
            R  G  P S         ++ M  G                               V  
Sbjct: 221 KRGIGCGPESSSGWNPAGCNYVMPYGGFSAFLREDENKLTRNGNGGSSGSNGSFFGRVKV 280

Query: 276 TAWHAVST------GTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
           TA   +        G  F V Y PR S  EF V       + +  +  GMRFKM FE E+
Sbjct: 281 TAEAVIEAVRLAVNGQPFEVIYYPRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETED 340

Query: 330 APE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           +     F GTI  ++ ADP RW DS WR L+V WDE   +   +RVS W +E     P++
Sbjct: 341 SSRISWFMGTISSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPSI 400

Query: 389 NSLPMPRPKRPRSNMLPSSPD 409
           +      P++      P  PD
Sbjct: 401 HLTHFSPPRKKLR--FPQYPD 419


>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 701

 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/416 (37%), Positives = 216/416 (51%), Gaps = 68/416 (16%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDL 95
           +++ + E  L  +LWHACAG +V +P    RV+YFPQGH E    S   V  +  P   +
Sbjct: 9   EKLKEVEKCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEH---SCAPVDFRNCP--KV 63

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE----------NAVEKEPPPPPPPR 145
           PS  LCRV  ++  A+PDTDEVFA++ L+P +  +           N  E++ P      
Sbjct: 64  PSYTLCRVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPT----- 118

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
               SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRH
Sbjct: 119 ----SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRH 174

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI- 264
           I+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA R  G+ P S   
Sbjct: 175 IYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCG 234

Query: 265 ----------------------------SSHSMH-----LG-------VLATAWHAVSTG 284
                                       S++ M+     +G        +  A    S G
Sbjct: 235 WNPAGGNCAVSYGAFSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNG 294

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIE 343
             F + + PR S  EF V       +++  +  GMRFKM FE E++     F GTI  ++
Sbjct: 295 QPFEIIFYPRASTPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQ 354

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE--PALAPPALNSLPMPRPK 397
            +DP RW +S WR L+V WDE   +   +RVS W +E   +++P  L     PR K
Sbjct: 355 VSDPLRWPESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKK 410


>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
          Length = 705

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 157/413 (38%), Positives = 215/413 (52%), Gaps = 43/413 (10%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           +K VG+ E  L  +LWHACAG +V +P    RVYYFPQGH E   +     A +      
Sbjct: 20  MKEVGE-ERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAATVG 78

Query: 95  ---LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP----PPPPPPRFH 147
              LP+ +LC V  V+  A+P+TDEVFA++ L+P    DE A  +EP    P     +  
Sbjct: 79  PRLLPALVLCSVAGVRFLADPETDEVFAKIRLVP-VGPDEVAF-REPEGLGPLEAEAQEK 136

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
           + SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG  W+FRHI+
Sbjct: 137 LASFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIY 196

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR------------- 254
           RG PRRHLL +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RRA R             
Sbjct: 197 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGWN 256

Query: 255 -----------------QQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSP 297
                               +    +     + +  +  A    + G  F V Y PR S 
Sbjct: 257 APGYGGFSAFLKDEENKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYYPRAST 316

Query: 298 SEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWR 356
            EF+V       +++ ++  GMRFKM FE E++     F GTI  ++ ADP RW +S WR
Sbjct: 317 PEFVVKAASMQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWR 376

Query: 357 CLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
            L+V WDE   +   + VS W +E   + P ++  P   P++     +P  PD
Sbjct: 377 LLQVSWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSPPRKKLR--VPQHPD 427


>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
          Length = 706

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 148/409 (36%), Positives = 210/409 (51%), Gaps = 46/409 (11%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDL 95
           +R GD    L  +LWHACAG +V +P    +VYYFPQGH E  +               +
Sbjct: 13  ERGGDDGRCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQCGGGDFPPGAGAGRGI 72

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH------ 149
           P+ +LCRV  V   A+PDTDEVFA++ L+P    ++   +                    
Sbjct: 73  PALVLCRVAGVHFMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAEK 132

Query: 150 --SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+
Sbjct: 133 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIY 192

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA--------------- 252
           RG PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA               
Sbjct: 193 RGTPRRHLLTTGWSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPELLPPPP 252

Query: 253 -------------MRQQGNVPSSVISSHSMHLGV---------LATAWHAVSTGTMFTVY 290
                        +R + +  + ++++ +   G          +A A +  ++G  F V 
Sbjct: 253 PPPGTNYGGFSMFLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLAASGQPFDVV 312

Query: 291 YKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQR 349
           Y PR S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ +DP R
Sbjct: 313 YYPRASTPEFCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVQVSDPIR 372

Query: 350 WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           W +S WR L+V WDE   +   +RVS W +E     PA++  P   P++
Sbjct: 373 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRK 421


>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
          Length = 700

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 152/400 (38%), Positives = 207/400 (51%), Gaps = 40/400 (10%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    RVYYFPQGH E  +      A   +P   +P+ +LCRV  V+
Sbjct: 24  QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGH----AHADLPAGRVPALVLCRVDAVR 79

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS 167
             A+PDTDEV A+V L P    + +  +   P     +    SF KTLT SD +  GGFS
Sbjct: 80  FLADPDTDEVLARVRLAPVRPNEPDHADAAAPGAREDK--PASFAKTLTQSDANNGGGFS 137

Query: 168 VLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSK 227
           V R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PRRHLL +GWS FV+ K
Sbjct: 138 VPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQK 197

Query: 228 RLVAGDAFIFLRGENGELRVGVRRAMRQQ-GNVP--------------------SSVISS 266
           RLVAGD+ +F+R  NG+L VG+RRA +   G  P                    S+ +  
Sbjct: 198 RLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRG 257

Query: 267 HSMHLGV------------LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN 314
                              +  A +  ++G  F V Y PR S  EF V       +++  
Sbjct: 258 EEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQ 317

Query: 315 YSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPER 373
           +  GMRFKM FE E++     F GT+  ++ ADP RW +S WR L+V WDE   +   +R
Sbjct: 318 WCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKR 377

Query: 374 VSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           VS W +E   + PA++ L    P   +   +P  P+   L
Sbjct: 378 VSPWLVELVSSTPAIHHLTPFSPPSRKKLCIPLYPEGHQL 417


>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
 gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
          Length = 755

 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 155/411 (37%), Positives = 213/411 (51%), Gaps = 56/411 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P    +V+YFPQGH E  +++ +   D     + +P  ILC
Sbjct: 61  EKSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEHAQSNVD-FGDS----FRIPPLILC 115

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPE-----SNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
           RV +V+  A+ +TDEVF+++TL+P       N D +    E    P       SF KTLT
Sbjct: 116 RVASVKFLADSETDEVFSKITLIPLRNSELENDDSDGDGSENSEKPA------SFAKTLT 169

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 170 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLL 229

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH-SMHLG 272
            +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RRA R   N    PS   S + +  LG
Sbjct: 230 TTGWSSFVNQKKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLG 289

Query: 273 VLATAWHA---------------------------------VSTGTMFTVYYKPRTSPSE 299
               A+ A                                  ++   F V Y PR S  E
Sbjct: 290 PYGGAFTAFLREENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYYPRASTPE 349

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCL 358
           F +       +++  +  GMRFKM FE E++     F GTI  ++  DP RW +S WR L
Sbjct: 350 FCIKTSAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLL 409

Query: 359 KVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
           +V WDE   +   +RVS W +E       ++  P   P++      P  PD
Sbjct: 410 QVTWDEPDLLHNVKRVSPWLVELVSNMSMIHLAPFSPPRKKLR--FPQHPD 458


>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
          Length = 700

 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 154/406 (37%), Positives = 207/406 (50%), Gaps = 69/406 (16%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    +VYYFPQGH E  +         + P   +P+ +LCRV  V+
Sbjct: 23  QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGH----GPVEFPGGRVPALVLCRVAGVR 78

Query: 108 LKAEPDTDEVFAQVTLLPESNQDEN---------------AVEKEPPPPPPPRFHVHSFC 152
             A+PDTDEVFA++ L+P    ++                A ++E P          SF 
Sbjct: 79  FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPA---------SFA 129

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PR
Sbjct: 130 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPR 189

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV--------- 263
           RHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA +     P  +         
Sbjct: 190 RHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPT 249

Query: 264 ------ISSHSMHL------------------------GVLATAWHAVSTGTMFTVYYKP 293
                     SM L                         V+  A  AVS G  F V Y P
Sbjct: 250 PAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVS-GQPFEVVYYP 308

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRD 352
           R S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +
Sbjct: 309 RASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 368

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           S WR L+V WDE   +   +RVS W +E     PA++  P   P++
Sbjct: 369 SPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRK 414


>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
 gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
 gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
 gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 700

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 154/406 (37%), Positives = 207/406 (50%), Gaps = 69/406 (16%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    +VYYFPQGH E  +         + P   +P+ +LCRV  V+
Sbjct: 23  QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGH----GPVEFPGGRVPALVLCRVAGVR 78

Query: 108 LKAEPDTDEVFAQVTLLPESNQDEN---------------AVEKEPPPPPPPRFHVHSFC 152
             A+PDTDEVFA++ L+P    ++                A ++E P          SF 
Sbjct: 79  FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPA---------SFA 129

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PR
Sbjct: 130 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPR 189

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV--------- 263
           RHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA +     P  +         
Sbjct: 190 RHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPT 249

Query: 264 ------ISSHSMHL------------------------GVLATAWHAVSTGTMFTVYYKP 293
                     SM L                         V+  A  AVS G  F V Y P
Sbjct: 250 PAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVS-GQPFEVVYYP 308

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRD 352
           R S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +
Sbjct: 309 RASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 368

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           S WR L+V WDE   +   +RVS W +E     PA++  P   P++
Sbjct: 369 SPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRK 414


>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 697

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 153/404 (37%), Positives = 211/404 (52%), Gaps = 55/404 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YF QGH E   A  +  A +      +P  ILC
Sbjct: 4   EKSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH----------SF 151
           RV++V+  A+ +TDEVFA++TLLP    D +          PP   V+          SF
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDVNVNGNGNEKPASF 117

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG P
Sbjct: 118 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTP 177

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA------------------- 252
           RRHLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA                   
Sbjct: 178 RRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLGSDNPYPGF 237

Query: 253 -----------------MRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRT 295
                            M++ GN   +  +   + +  +A A    + G  F V Y PR 
Sbjct: 238 SGFLRDDETSTTSKLMMMKRNGN-DGNAAAGGRVRVEAVAEAVARAACGQAFEVVYYPRA 296

Query: 296 SPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSK 354
           S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +S 
Sbjct: 297 STPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 356

Query: 355 WRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
           WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 357 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 400


>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
 gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
 gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
 gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 670

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 165/445 (37%), Positives = 232/445 (52%), Gaps = 86/445 (19%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G  E  L  +LWHACAG +V +P    +V+YFPQGH E    + + V    +P+   P  
Sbjct: 10  GGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN---AYDCVDFGNLPI---PPM 63

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESN-----------QDENAVEKEPPPPPPPRFH 147
           +LCRV+ ++  A+ ++DEVFA++ L+P  +           +D N  E      P     
Sbjct: 64  VLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTP----- 118

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG+ W+FRHI+
Sbjct: 119 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIY 176

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ-GNVP------ 260
           RG PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA R   GN P      
Sbjct: 177 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGW 236

Query: 261 ---------SSVI---SSHSMHL---------------GVLATAWHAVSTGTMFTVYYKP 293
                    SS++    S+S+                  V+  A  A+S G  F V Y P
Sbjct: 237 NPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAIS-GRPFEVVYYP 295

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S SEF V       +++  +  GMRFKM FE E++     F GT+  +  +DP RW +
Sbjct: 296 RASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPN 355

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIE----------PALAPP--------------AL 388
           S WR L+V WDE   +   +RV+ W +E           + +PP               +
Sbjct: 356 SPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLI 415

Query: 389 NSLPMPRPKRPRSNMLPSSPDSSVL 413
           NS+P+  P  P + ++ SSP SSVL
Sbjct: 416 NSIPV--PSFPSNPLIRSSPLSSVL 438


>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
 gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
          Length = 653

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/445 (37%), Positives = 232/445 (52%), Gaps = 86/445 (19%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G  E  L  +LWHACAG +V +P    +V+YFPQGH E    + + V    +P+   P  
Sbjct: 10  GGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN---AYDCVDFGNLPI---PPM 63

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESN-----------QDENAVEKEPPPPPPPRFH 147
           +LCRV+ ++  A+ ++DEVFA++ L+P  +           +D N  E      P     
Sbjct: 64  VLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTP----- 118

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG+ W+FRHI+
Sbjct: 119 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIY 176

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ-GNVP------ 260
           RG PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA R   GN P      
Sbjct: 177 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGW 236

Query: 261 ---------SSVI---SSHSMHL---------------GVLATAWHAVSTGTMFTVYYKP 293
                    SS++    S+S+                  V+  A  A+S G  F V Y P
Sbjct: 237 NPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAIS-GRPFEVVYYP 295

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S SEF V       +++  +  GMRFKM FE E++     F GT+  +  +DP RW +
Sbjct: 296 RASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPN 355

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIE----------PALAPP--------------AL 388
           S WR L+V WDE   +   +RV+ W +E           + +PP               +
Sbjct: 356 SPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLI 415

Query: 389 NSLPMPRPKRPRSNMLPSSPDSSVL 413
           NS+P+  P  P + ++ SSP SSVL
Sbjct: 416 NSIPV--PSFPSNPLIRSSPLSSVL 438


>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
 gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
          Length = 644

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/401 (38%), Positives = 208/401 (51%), Gaps = 42/401 (10%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           +K  G+ E  L  +LWHACAG +V +P    RVYYFPQGH E                  
Sbjct: 1   MKEAGE-ERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARP 59

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-----PPPPPRFHVH 149
           LP  +LC V  V+  A+P+TDEVFA++ L+P +  +   VE   P      P   R  + 
Sbjct: 60  LPPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGE---VEFGEPREFGIDPEDAREKLS 116

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG  W+FRHIFRG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRG 176

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR--------------- 254
            PRRHLL +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RRA R               
Sbjct: 177 TPRRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAP 236

Query: 255 -----------QQGNV---PSSVISSHS-MHLGVLATAWHAVSTGTMFTVYYKPRTSPSE 299
                      ++G +   P   +     + +  +  A    ++G  F V Y PR S  E
Sbjct: 237 VYGALSAFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPE 296

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCL 358
           F+V       +++N +  GMRFKM FE E++     F GTI   + AD  RW +S WR L
Sbjct: 297 FVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLL 356

Query: 359 KVRWDETSTIPRPERVSLWKIE--PALAPPALNSLPMPRPK 397
           +V WDE   +   + V+ W +E   ++ P  L +   PR K
Sbjct: 357 QVSWDEPDLLQNVKCVNPWLVEIVSSIPPIHLGTFSPPRKK 397


>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
 gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
          Length = 708

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/411 (38%), Positives = 206/411 (50%), Gaps = 78/411 (18%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV---YDLPSKIL 100
           +L  +LW ACAG +V +P    +V+YFPQGH E            Q PV     +PS +L
Sbjct: 8   SLDPQLWQACAGSMVQIPPLNTKVFYFPQGHAEH----------SQSPVDFPQRIPSLVL 57

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLP---------------ESNQDENAVEKEPPPPPPPR 145
           CRV +V+  A+P TDEVFA+++L+P                   D N  EK         
Sbjct: 58  CRVASVKFLADPGTDEVFAKISLVPLPDADLDISQDVDICGDGNDSNNAEKPA------- 110

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
               SF KTLT SD +  GGFSV R  A+   P LD S  PP Q L AKD+HG  W+FRH
Sbjct: 111 ----SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRH 166

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG------NV 259
           I+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA R  G      + 
Sbjct: 167 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGVGIGSGPESS 226

Query: 260 PSSV-------------------ISSHSMHLG------------VLATAWHAVSTGTMFT 288
           PS +                   +    M  G            VL  A  A + G  F 
Sbjct: 227 PSHIGWNSNNATSANPYGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLA-ANGNPFQ 285

Query: 289 VYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADP 347
           V Y PR S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP
Sbjct: 286 VVYYPRASTPEFCVKASSVRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVADP 345

Query: 348 QRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            RW +S WR L+V WDE   +   + VS W +E     P ++  P   P++
Sbjct: 346 DRWPNSPWRLLQVTWDEPDLLQTVKCVSPWLVELVSNMPVIHLSPFSPPRK 396


>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 647

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/422 (36%), Positives = 213/422 (50%), Gaps = 61/422 (14%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDL 95
           +++ + E  L  +LWHACAG +V +P    +VYYFPQGH E      N     ++P +  
Sbjct: 9   EKLKEVERCLDPQLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVNFKTCPKVPPF-- 66

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLP----ESNQDENAVEKEPPPPPPPRFHVHSF 151
              + CRV+ V+  A+P+TDEV+A++ L+P    + + D + +  E    P       SF
Sbjct: 67  ---VPCRVVAVKYMADPETDEVYAKLKLVPLNANDVDYDHDVIGAETRDKPA------SF 117

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG P
Sbjct: 118 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTP 177

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR--------------QQG 257
           RRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA +                G
Sbjct: 178 RRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGG 237

Query: 258 NVPS-----------------------------SVISSHSMHLGVLATAWHAVSTGTMFT 288
           N P                              S++    +    +  A +  +    F 
Sbjct: 238 NFPMPYSGFSPFLREDDNRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFE 297

Query: 289 VYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADP 347
           V Y PR S  EF V       +++  +  G+RFKM FE E++     F GTI  ++ ADP
Sbjct: 298 VVYYPRASTPEFCVKASLVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADP 357

Query: 348 QRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSS 407
             W +S WR L+V WDE   +    RVS W +E     PA++  P   P++     LP  
Sbjct: 358 LNWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLR--LPQH 415

Query: 408 PD 409
           PD
Sbjct: 416 PD 417


>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
          Length = 702

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 155/409 (37%), Positives = 210/409 (51%), Gaps = 61/409 (14%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YF QGH E   A  +  A +      +P  ILC
Sbjct: 4   EKSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD----ENAVEKEPPPP----PPPRFHVHSFCK 153
           RV+ V+  A+ +TDEVF+++TLLP    D     +AV    P P    P       SF K
Sbjct: 58  RVVAVKFLADAETDEVFSKITLLPLPGNDLDLENDAVLGLTPSPDGNGPNGNEKPASFAK 117

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRR 177

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL-- 271
           HLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA R  G + S+ + S + ++  
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGVGSDNNNIPY 235

Query: 272 ----GVLATAWHAVS-------------------------------------TGTMFTVY 290
               G L       S                                      G  F V 
Sbjct: 236 PGFSGFLRDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARGQAFEVV 295

Query: 291 YKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQR 349
           Y PR S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP R
Sbjct: 296 YYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIR 355

Query: 350 WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
           W +S WR L+V WDE   +   +RVS W +E     P ++  P  PR K
Sbjct: 356 WPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKK 404


>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 670

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/445 (36%), Positives = 233/445 (52%), Gaps = 86/445 (19%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G  E  L  +LWHACAG +V +P    +V+YFPQGH E    + + V    +P++ +   
Sbjct: 10  GGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN---AYDCVDFGNLPIHPM--- 63

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESN-----------QDENAVEKEPPPPPPPRFH 147
           +LCRV+ ++  A+ ++DEV+A++ L+P  +           +D N  E      P     
Sbjct: 64  VLCRVLAIKYMADAESDEVYAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTP----- 118

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG+ W+FRHI+
Sbjct: 119 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIY 176

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ-GNVP------ 260
           RG PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA R   GN P      
Sbjct: 177 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGW 236

Query: 261 ---------SSVI---SSHSMHL---------------GVLATAWHAVSTGTMFTVYYKP 293
                    SS++    S+S+                  V+  A  A+S G  F V Y P
Sbjct: 237 NPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAIS-GRPFEVVYYP 295

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S SEF V       +++  +  GMRFKM FE E++     F GT+  +  +DP RW +
Sbjct: 296 RASTSEFCVKAVDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPN 355

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIE----------PALAPP--------------AL 388
           S WR L+V WDE   +   +RV+ W +E           + +PP               +
Sbjct: 356 SPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLI 415

Query: 389 NSLPMPRPKRPRSNMLPSSPDSSVL 413
           NS+P+  P  P + ++ SSP SSVL
Sbjct: 416 NSIPV--PSFPSNPLIRSSPLSSVL 438


>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
 gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
          Length = 709

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 156/403 (38%), Positives = 208/403 (51%), Gaps = 54/403 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L  +LWHACAG +V +P    +V+YFPQGH E  ++  +  +        +PS +LC
Sbjct: 5   EKRLDPQLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPVDFSSR-------IPSLVLC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPE-SNQ----DENAVEKEPPPPPPPRFHVHSFCKTLT 156
           RV  V+  A+ +TDEV+A+++L P  SN+    DE  +               SF KTLT
Sbjct: 58  RVAGVKYLADSETDEVYAKISLFPLPSNELDFGDEIGLCDTSTNGTNSTEKPTSFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR--QQGNVPSS------------ 262
            +GWS FV+ K+LVAGD+ +FLR E+G+L VG+RRA R    GN P S            
Sbjct: 178 TTGWSTFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNASC 237

Query: 263 ---VISSHSMHLG-----------------------VLATAWHAVSTGTMFTVYYKPRTS 296
                   S+ L                        VL +A  A + G  F V Y PR S
Sbjct: 238 VNPYTGGFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALA-ANGQPFEVVYYPRAS 296

Query: 297 PSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKW 355
             EF V       S +  +  GMRFKM FE E++     F GTI  ++ ADP RW +S W
Sbjct: 297 TPEFCVKASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPIRWPNSPW 356

Query: 356 RCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           R L+V WDE   +   +RVS W +E     P ++  P   P++
Sbjct: 357 RLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRK 399


>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
          Length = 703

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 152/405 (37%), Positives = 207/405 (51%), Gaps = 55/405 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           RV +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ-------------------- 256
            +GWS FV+ K+L+AGD+ +FLR E G+L VG+RRA R                      
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGLGSDNNNNSNNPYPG 237

Query: 257 ----------------------GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR 294
                                 GNV  +      + +  +A A    + G  F V Y PR
Sbjct: 238 FSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPR 297

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDS 353
            S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +S
Sbjct: 298 ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 357

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
            WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 358 PWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 402


>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
          Length = 707

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 159/406 (39%), Positives = 214/406 (52%), Gaps = 52/406 (12%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +  +LW ACAG + TVP  G  V YFPQGH E      +  AD  +    +P+ + C
Sbjct: 16  ERCVDRQLWLACAGSMCTVPLVGASVCYFPQGHAEHA-LGLDGAAD--LSAARVPALVPC 72

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAV----------EKEPPPPPPPRFHVHSF 151
           RV  V+  A+PDTDEVFA++ L+P    + +A           E+E P          SF
Sbjct: 73  RVTAVRYMADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQEKPA---------SF 123

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W+FRHI+RG P
Sbjct: 124 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYRGTP 183

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ---------------- 255
           RRHLL +GWS FV+ K+L+AGD+ +FLRG++G+L VG+RRA R                 
Sbjct: 184 RRHLLTTGWSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAPTPG 243

Query: 256 --------QGNVP--SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYD 305
                   +GNV   ++  +   +    +A A    + G  F V Y PR S  EF V   
Sbjct: 244 WHHYAGLIRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVRAA 303

Query: 306 QYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDE 364
               +++  +S GMRFKM FE E++     F GT+ G++  DP RW  S WR L+V WDE
Sbjct: 304 AVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDE 363

Query: 365 TSTIPRPERVSLWKIEPALAPPA--LNSLPMPRPKRPRSNMLPSSP 408
              +   +RVS W +E   + PA  L S   PR K+PR    P  P
Sbjct: 364 PDLLQNVKRVSPWLVELVSSMPAIHLASFSPPR-KKPRIPAYPEFP 408


>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 670

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 145/391 (37%), Positives = 208/391 (53%), Gaps = 41/391 (10%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           + + +L  +LWHACAG +V +P    +V+YFPQGH E  +++ +  A  ++P+   P  I
Sbjct: 3   ETDKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSNVDFGA-ARIPI---PPLI 58

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           LCRV  V+  A+P+TDEVFA++ L+P  N + +  + +            SF KTLT SD
Sbjct: 59  LCRVAAVKFLADPETDEVFARLRLVPLRNSELDYEDSDANGEAEGSEKPASFAKTLTQSD 118

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
            +  GGFSV R  A+   P LD S +PP Q + A+D+HG  W+FRHI+RG PRRHLL +G
Sbjct: 119 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTTG 178

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS------------------ 261
           WS FV+ K+LVAGD+ +FLR ENG+L VG+RRA R     P                   
Sbjct: 179 WSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGPY 238

Query: 262 -------------SVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYM 308
                        + +S  S+   V   A     +   F V Y PR +  EF +      
Sbjct: 239 GAFSGFMREESGRAKVSGESVREAVTLAA-----SNQAFEVVYYPRANTPEFCIRTSAVR 293

Query: 309 ESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETST 367
            +++  +  GMRFKM FE E++     F GTI  ++  DP RW +S WR L+V WDE   
Sbjct: 294 GAMRIQWCSGMRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDL 353

Query: 368 IPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           +   +RVS W +E     P ++      P++
Sbjct: 354 LHNVKRVSPWLVELVSNVPIIHLAAFSPPRK 384


>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
          Length = 624

 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 133/264 (50%), Positives = 171/264 (64%), Gaps = 25/264 (9%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN-QVADQQMPVYDLPSK 98
           DPE  L+ ELW ACAGPLV +P+  ERV+YF QGH+EQ++  T+  +  +Q+ ++ +P+K
Sbjct: 8   DPE-ELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNK 66

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
           ILC       KAE +TDE++AQ+TL PE +Q +     EPP     R  VHSFCK LT S
Sbjct: 67  ILC-------KAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPS 119

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           DTSTHGGFSVLRRHA+ECLP LDMS   PTQEL  KDLHG+EWRF+HI+RGQPRRHLL +
Sbjct: 120 DTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTT 179

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGE---------------LRVGVRRAMRQQG-NVPSS 262
           GWS FV+SK+L+AGDAF++LR    +                 VG+R  M  +G +VP  
Sbjct: 180 GWSTFVTSKKLIAGDAFVYLRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIK 239

Query: 263 VISSHSMHLGVLATAWHAVSTGTM 286
             S   +  G L+  W      T+
Sbjct: 240 KFSGTVVDKGDLSPQWQGSEWKTL 263



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 7/134 (5%)

Query: 273 VLATAWHAVSTGTMFTV---YYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
           +L T W    T         +   R S S++IV  ++Y+ES K  + +GMRFKM FEG++
Sbjct: 176 LLTTGWSTFVTSKKLIAGDAFVYLRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDD 235

Query: 330 APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN 389
            P ++F+GT+V   D  PQ W+ S+W+ LKV+WDE + +  PERVS W+IEP  A     
Sbjct: 236 VPIKKFSGTVVDKGDLSPQ-WQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAI 294

Query: 390 SLPMP---RPKRPR 400
           ++P+    + KRPR
Sbjct: 295 TMPVQPSMKNKRPR 308


>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
 gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
          Length = 709

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 215/427 (50%), Gaps = 74/427 (17%)

Query: 32  TSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMP 91
           ++ ++R  + +  L  +LWHACAG +V +P    +VYYFPQGH E  +     V D  +P
Sbjct: 7   SAAMERERESDRCLDPQLWHACAGGMVQMPPVHSKVYYFPQGHAEHAQGP---VVD--LP 61

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLP---------------ESNQDENAVEK 136
              +P+ +LCRV  V+  A+PDTDEVFA++ L P                         +
Sbjct: 62  AGRVPALVLCRVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYAADADDAIGAAAAGGGAQ 121

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           E  P         SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+
Sbjct: 122 EDKPA--------SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDV 173

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
           HG  W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA +  
Sbjct: 174 HGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGG 233

Query: 257 GNVPSSV-------------ISSHSMHL--------GVLAT------------------- 276
              P  +              +  SM L         ++AT                   
Sbjct: 234 IGGPEFLHHHQPPPPPGGGGYAGFSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVV 293

Query: 277 -AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR- 334
            A +   +G  F V Y PR S  EF V       +++  +  GMRFKM FE E++     
Sbjct: 294 EAANLAVSGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISW 353

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL--- 391
           F GT+  ++ ADP RW +S WR L+V WDE   +   +RVS W +E     PA++ L   
Sbjct: 354 FMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPF 413

Query: 392 -PMPRPK 397
            P PR K
Sbjct: 414 SPPPRKK 420


>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 608

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/447 (36%), Positives = 218/447 (48%), Gaps = 68/447 (15%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L ++LWHACAG +V +P    +V+YFPQGH E                  +P  I C
Sbjct: 5   ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKVEYFGKNHQT--RVPPLIPC 62

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPE--------------SNQDENAVEKEPPPPPPPRFH 147
           R+  ++  A+PDTDEV+ ++ L P                N +   VE +  PP      
Sbjct: 63  RLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEKPPT----- 117

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG  W+FRHI+
Sbjct: 118 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIY 175

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG---------N 258
           RG PRRHLL +GWS FV+ KRLVAGD+ +FLR ENG+L VG+RRA +  G         N
Sbjct: 176 RGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWN 235

Query: 259 VP-------------SSVISS------HSMHLGVLA-----TAWHAVSTGTMFTVYYKPR 294
            P             SS +S       H + +G +A      A      G  F V Y PR
Sbjct: 236 NPLFGGGGGFLCGSESSFVSGAKSGGDHEI-VGRVAPESVVEAVTCAVNGRPFEVVYYPR 294

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDS 353
            S  EF V       +++  +  GMRFKM FE E++     F GTI  ++ ADP RW DS
Sbjct: 295 ASSPEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDS 354

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS----------NM 403
            WR L+V WDE   +   + V+ W +E     P  N      P++ +           N 
Sbjct: 355 PWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPTFNLSAYSPPRKKQRFLQDPYFQVINQ 414

Query: 404 LPSSPDSSVLTREGSSKLNVDPSSATG 430
           LP    SS L    +S   +  S+++G
Sbjct: 415 LPMPSFSSNLLNYTNSLCTIQDSNSSG 441


>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
          Length = 701

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/405 (37%), Positives = 208/405 (51%), Gaps = 52/405 (12%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YF QGH E   A  +  A +      +P  ILC
Sbjct: 4   EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD----ENAVEKEPPPPPPPRFHVH----SFCK 153
           RV++V+  A+ +TDEVFA++TLLP    D     +AV    PP      +      SF K
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAK 117

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           TLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG  W+FRHI+RG PRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPRR 177

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA--------------------- 252
           HLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA                     
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGF 237

Query: 253 ---------------MRQQGNVPSSVISSHSMHLGVLATAWHAVS-TGTMFTVYYKPRTS 296
                          M++ GN   +  ++  + +  +A +  A S     F V Y PR S
Sbjct: 238 LRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVVYYPRAS 297

Query: 297 PSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKW 355
             EF V       +++  +  GMR KM FE E++     F GT   ++ ADP RW +S W
Sbjct: 298 TPEFCVKAADVRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVADPIRWPNSPW 357

Query: 356 RCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           R L+V WDE       +RVS W +      P ++  P    K+ R
Sbjct: 358 RLLQVAWDEPDLXQNVKRVSPWLVXLVSNMPTIHLSPFSXWKKIR 402


>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
 gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
          Length = 700

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 212/422 (50%), Gaps = 63/422 (14%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP--S 97
           + +  L ++LWHACAG +V +P    +V+YFPQGH E         A + +   +LP  S
Sbjct: 14  EADKCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEH--------ACEPVDFRNLPGAS 65

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLP------ESNQDENAVEKEPPPPPPPRFHVHSF 151
             LCRV  ++  A+P+TDEVFA++ L+P      + +  E AV  E       +  V SF
Sbjct: 66  HTLCRVSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPV-SF 124

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFSV R  A+   P LD +  PP Q L AKD+HG  W+FRHI+RG P
Sbjct: 125 AKTLTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTP 184

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           RRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VGVRRA R     P S+ +    +L
Sbjct: 185 RRHLLTTGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNL 244

Query: 272 GVLATAWHAVS-------------------------------------------TGTMFT 288
            V    + A S                                            G  F 
Sbjct: 245 VVPYGGFGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFE 304

Query: 289 VYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADP 347
             Y PR +  EF V        ++  +  GMRFKM FE E++     F GT+  ++DADP
Sbjct: 305 TVYYPRANTPEFFVKASLVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQDADP 364

Query: 348 QRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSS 407
             W  S WR L+V WDE   +   +RVS W +E A    A++  P   P++     LP  
Sbjct: 365 LCWPGSPWRLLQVTWDEPDLLQNVKRVSPWLVELASHMSAIHLSPFSSPRKKLR--LPQH 422

Query: 408 PD 409
           PD
Sbjct: 423 PD 424


>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
 gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
 gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
 gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
 gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
          Length = 703

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/405 (37%), Positives = 206/405 (50%), Gaps = 55/405 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LW ACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           RV +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ-------------------- 256
            +GWS FV+ K+L+AGD+ +FLR E GEL VG+RRA R                      
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNNNSNNPYPG 237

Query: 257 ----------------------GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR 294
                                 GNV  +      + +  +A A    + G  F V Y PR
Sbjct: 238 FSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPR 297

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDS 353
            S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +S
Sbjct: 298 ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 357

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
            WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 358 PWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 402


>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 158/437 (36%), Positives = 218/437 (49%), Gaps = 63/437 (14%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L  +LWHACAG +V +P    +VYYFPQGH E      N     ++P +     + C
Sbjct: 15  ESCLDPQLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPVNFRTCPKVPPF-----VPC 69

Query: 102 RVINVQLKAEPDTDEVFAQVTLLP----ESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
           RV  V+ +A+P+TDEV+A++ L+P    + + D + V        P      SF KTLT 
Sbjct: 70  RVTAVKYRADPETDEVYAKLKLIPLNANDVDYDRDVVGGAETQDKPA-----SFAKTLTQ 124

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PRRHLL 
Sbjct: 125 SDANNGGGFSVPRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLT 184

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA------------------------- 252
           +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA                         
Sbjct: 185 TGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCHIPY 244

Query: 253 ------MRQQGNVPSSVISSHSMHLGV------------LATAWHAVSTGTMFTVYYKPR 294
                  R+  N  S   +S+ ++  V            ++ A +  +    F V Y PR
Sbjct: 245 GGFSPFFREDDNRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVYYPR 304

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDS 353
            S  EF V       +++  +  G+RFKM FE E++     F GTI   + ADP  W +S
Sbjct: 305 ASTPEFCVKASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVADPLNWPNS 364

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
            WR L+V WDE   +    RVS W +E     PA++  P   P++     LP  PD    
Sbjct: 365 PWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLR--LPQQPD---F 419

Query: 414 TREGSSKLNVDPSSATG 430
             +G   L+  PS+  G
Sbjct: 420 PLDGQIPLSTFPSNLLG 436


>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
 gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
          Length = 716

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 153/410 (37%), Positives = 206/410 (50%), Gaps = 68/410 (16%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           ++R  + +  L  +LWHACAG +V +P    +VYYFPQGH E  +   +      +P   
Sbjct: 1   MERERESDRCLDPQLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQGPVD------LPAGR 54

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLP-----------ESNQDENAVEKEPPPPPP 143
           +P+ +LCRV  V+  A+PDTDEVFA++ L P                  +  +E  P   
Sbjct: 55  VPALVLCRVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQEDKPA-- 112

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
                 SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+F
Sbjct: 113 ------SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKF 166

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
           RHI+RG PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA +     P  +
Sbjct: 167 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFM 226

Query: 264 --------------ISSHSMHL---------------------------GVLATAWHAVS 282
                          +  SM L                            V+  A  AVS
Sbjct: 227 HHHHQQPPPPQGGGYAGFSMFLRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVS 286

Query: 283 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVG 341
            G  F V Y PR S  EF V       +++  +  GMRFKM FE E++     F GT+  
Sbjct: 287 -GQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSA 345

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
           +  ADP RW +S WR L+V WDE   +   +RVS W +E     P ++ L
Sbjct: 346 VHVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPVIHHL 395


>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
 gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
          Length = 619

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 165/464 (35%), Positives = 227/464 (48%), Gaps = 72/464 (15%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L ++LWHACAG +V +P    +V+YFPQGH E      N+V   +  V   P  I C
Sbjct: 13  EKCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAH---NKVDFSKTRV---PPLIPC 66

Query: 102 RVINVQLKAEPDTDEVFAQVTLLP--ESNQD--------ENAVEKEPPPPPPPRFHVHSF 151
           R+  ++  A+P+TDEV+ ++ L P  E+  D         N +E +  P         SF
Sbjct: 67  RISAMKYMADPETDEVYVKMKLTPLRENELDFEEDCFFGNNGLESQEKPA--------SF 118

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG  W+FRHI+RG P
Sbjct: 119 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTP 178

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR--------QQGNVPSSV 263
           RRHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA +        Q  N  S+ 
Sbjct: 179 RRHLLTTGWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTW 238

Query: 264 ISSHSMHLGV--------------------------LATAWHAVSTGTMFTVYYKPRTSP 297
                +  GV                          +  A +    G  F V Y PR S 
Sbjct: 239 NRVSPLFGGVGSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYYPRAST 298

Query: 298 SEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWR 356
            EF V       +++  +  GMRFKM FE E++     F GTI  +   DP RW DS WR
Sbjct: 299 PEFCVKVSSVKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSPWR 358

Query: 357 CLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP-KRPRSNMLP---------- 405
            L+V WDE   +   + V+ W +E     P  N  P   P K+PR    P          
Sbjct: 359 LLQVVWDEPDLLQNVKCVNPWLVELVSNMPNFNLSPFTPPRKKPRFIQDPYFHLMNQSSS 418

Query: 406 -SSPDSSVLTREGSSKLNV-DPSSATGFSRVLQGQEFSTLRGNF 447
            S  + ++L    SS  N+ D ++ + F+  +QG   +    N+
Sbjct: 419 PSISNINLLNYTKSSLCNIQDTTTNSSFASSIQGARHAQFGPNY 462


>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/426 (36%), Positives = 219/426 (51%), Gaps = 65/426 (15%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDL 95
           +++ + +  L  +LWHACAG +V +P    +V+YFPQGH E    +   V  +  P   +
Sbjct: 9   EKLKEGDRCLDPQLWHACAGGMVQMPPVNAKVFYFPQGHAEH---ACGPVDFRNCP--RV 63

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLP----ESNQDENAVE----KEPPPPPPPRFH 147
           P+ ILCRV  ++  A+P TDEV+A++ L+P    E+  +++ +      E P  P     
Sbjct: 64  PAHILCRVAAIKFMADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPDKPA---- 119

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
             SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+FRHI+
Sbjct: 120 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIY 177

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ----------- 256
           RG PRRHLL +G S FV+ K+LV+GD+ +FLR ENG+L VG+RRA R             
Sbjct: 178 RGTPRRHLLTTGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWN 237

Query: 257 ---GN--VPSSVIS--------------------SHSMHLG-------VLATAWHAVSTG 284
              GN  VP    S                    S+   +G        +  A    + G
Sbjct: 238 PMGGNCTVPYGGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANG 297

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIE 343
             F V Y PR S  EF V       +++  +  GMRFKM FE E++     F GTI  ++
Sbjct: 298 QPFEVVYYPRASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQ 357

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNM 403
            A+P RW +S WR L+V WDE   +   +RVS W +E     PA++  P   P++     
Sbjct: 358 VAEPLRWPESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLTPFSPPRKKMR-- 415

Query: 404 LPSSPD 409
           LP  PD
Sbjct: 416 LPQHPD 421


>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 589

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 162/443 (36%), Positives = 221/443 (49%), Gaps = 63/443 (14%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L ++LWHACAG +V +P    +V+YFPQGH E            Q  V   P  I C
Sbjct: 5   ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKRVDFPKNQTRV---PPLIPC 61

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPE------SNQDE---------NAVEKEPPPPPPPRF 146
           R+  ++  A+PDTDEV+ ++ L P        +QD+           V++    PP    
Sbjct: 62  RLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQEKPPT--- 118

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
              SF KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+ G  W+FRHI
Sbjct: 119 ---SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHI 175

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG--------- 257
           +RG PRRHLL +GWS FV+ KRLVAGD+ +FLR ENG+L VG+RRA +  G         
Sbjct: 176 YRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGG 235

Query: 258 -NVP-----------SSVISS--HSMHLGVLAT-----AWHAVSTGTMFTVYYKPRTSPS 298
            N P           S+++S   H M +G +A      A      G  F V Y PR S  
Sbjct: 236 WNNPLFGGGFLCGSESNLMSGGDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYYPRASSP 295

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRC 357
           EF V       +++  +  GMRFKM FE E++     F GTI  ++ ADP  W DS WR 
Sbjct: 296 EFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPDSPWRL 355

Query: 358 LKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRS----------NMLPSS 407
           L+V WDE   +   + V+ W +E     P  N      P++ +           N LP  
Sbjct: 356 LQVVWDEPDLLQNVKCVNPWLVELVSNMPTFNLSAYSPPRKKQRFLQDPYFQVINQLPMP 415

Query: 408 PDSSVLTREGSSKLNVDPSSATG 430
             SS L    +S   ++ ++++G
Sbjct: 416 SFSSNLLNYTNSICTIEDNNSSG 438


>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 151/412 (36%), Positives = 211/412 (51%), Gaps = 70/412 (16%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           + + +L  +LWHACAG +V +P    +V+YFPQGH E  +++ +     ++P+   P  I
Sbjct: 3   ETDKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSNVD-FGAARIPI---PPLI 58

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQ-------DENAVEKEPPPPPPPRFHVHSFC 152
           LC V  V+  A+P+TDEVFA++ ++P  N        D N  E    P         SF 
Sbjct: 59  LCCVAAVKFLADPETDEVFARLRMVPLRNSELDYEDSDGNGAEGSEKPA--------SFA 110

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG  W+FRHI+RG PR
Sbjct: 111 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPR 170

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA-------------------- 252
           RHLL +GWS FV+ K+LVAGD+ +FLR ENG+L VG+RRA                    
Sbjct: 171 RHLLTTGWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSSSGGG 230

Query: 253 ----------------------MRQQGNVPSS---VISSHSMHLGVLATAWHAVSTGTMF 287
                                 +R++  V  S    +S  S+   V      A S     
Sbjct: 231 LGPGPGLGLGPGPGPYGAFSGFLREESKVVRSGRPKVSGESVREAVTL----AASNQPFE 286

Query: 288 TVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDAD 346
            VYY PR +  EF +       +++  +S GMRFKM FE E++     F GTI  ++  D
Sbjct: 287 VVYY-PRANTPEFCIRTSAVRGAMRIQWSSGMRFKMPFETEDSSRISWFMGTIASVQLLD 345

Query: 347 PQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           P RW +S WR L+V WDE   +   +RVS W +E     P ++  P   P++
Sbjct: 346 PIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVSNVPIIHLAPFSPPRK 397


>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
 gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
          Length = 689

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 154/415 (37%), Positives = 208/415 (50%), Gaps = 44/415 (10%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           +K   + E  L  +LWHACAG +V +P    RVYYFPQ       A     AD       
Sbjct: 1   MKEAREEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQ--GHAEHAHAGGAADLAAGARP 58

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLP---------ESNQDENAVEKEPPPPPPPR 145
           LP  +LC V  V+  A+P+TDEVFA++ L+P         E ++    V      P   R
Sbjct: 59  LPPLVLCAVTGVRFLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADAR 118

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH 205
             + SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG  W+FRH
Sbjct: 119 EKLSSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRH 178

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVIS 265
           I+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RRA R        +  
Sbjct: 179 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSG 238

Query: 266 SHSMHLGVLAT------------------------------AWHAVSTGTMFTVYYKPRT 295
            ++   G L+                               A    ++G  F V Y PR 
Sbjct: 239 WNAPGYGALSAFLKDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYYPRA 298

Query: 296 SPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSK 354
           S  EF+V       +++N +  GMRFKM FE E++     F GTI   + ADP RW +S 
Sbjct: 299 STPEFVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSP 358

Query: 355 WRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
           WR L+V WDE   +   + V+ W +E   + P ++  P   P++     +P  PD
Sbjct: 359 WRLLQVTWDEPDLLQNVKCVNPWLVEIVSSIPPIHLGPFSPPRKKLR--MPQHPD 411


>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
 gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 716

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 155/418 (37%), Positives = 214/418 (51%), Gaps = 56/418 (13%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           + E  L  +LWHACAG +V +P    +V+YFPQGH E  +A+ +  +  +     +P  I
Sbjct: 3   EAEKILDPQLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLR-----IPPLI 57

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH---SFCKTLT 156
            CRV+ V+  A+ +TDEVFA V ++P  N D N  E+          ++    SF KTLT
Sbjct: 58  PCRVLAVKFLADLETDEVFANVRMVPLPNSDLNFEEEGGFGSSGSENNMEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV---RRAMRQQGNVP-------SSVISS 266
            +GWS FV+ K+LVAGD+ +FLR +NG+L VG+   +RA+    + P        + I  
Sbjct: 178 TTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCASDHPYGWNPGGGNCIPP 237

Query: 267 H---SMHL-------------------------------GVLATAWHAVSTGTMFTVYYK 292
           +   +M L                                V+  A  A S G  F V Y 
Sbjct: 238 YGGLTMFLRDDDNKLSRKGSLSSSGSGGNLRGKGKVRPESVMEAAALAAS-GQPFEVVYY 296

Query: 293 PRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWR 351
           PR S  EF V       +++  +  GMRFKM FE E++     F GTI  ++ ADP RW 
Sbjct: 297 PRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWP 356

Query: 352 DSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
           +S WR L+V WDE   +   +RVS W +E     P +   P   P+  +   LP  PD
Sbjct: 357 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIQLSPFSPPR--KKFRLPQHPD 412


>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
          Length = 705

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 149/406 (36%), Positives = 204/406 (50%), Gaps = 56/406 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           RV +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RVASVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV--------------------------- 249
            +GWS FV+ K+L+AGD+ +FLR E G+L VG+                           
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSG 237

Query: 250 ----------------RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKP 293
                           R A    GN   +      + +  +A A    + G  F V Y P
Sbjct: 238 FLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 297

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +
Sbjct: 298 RASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
           S WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 403


>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
 gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
          Length = 698

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/415 (37%), Positives = 206/415 (49%), Gaps = 56/415 (13%)

Query: 35  VKRVGDPE--MALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ-QMP 91
           +K VG+ E    L  +LWHACAG +V +P    RVYYF QGH E  +      A   ++ 
Sbjct: 1   MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELG 60

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVE-------------KEP 138
              LP  +LCRV  VQ  A+ D+DEV+A++ L P +  +    E              EP
Sbjct: 61  PRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEP 120

Query: 139 PPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHG 198
            P  P      SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG
Sbjct: 121 SPEKPT-----SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHG 175

Query: 199 NEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG- 257
             W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR  +GEL VG+RRA R    
Sbjct: 176 VVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACG 235

Query: 258 --------NVPSSVISSHSMHL-------------------------GVLATAWHAVSTG 284
                   N P       S  L                           +  A    S+G
Sbjct: 236 GMECMSGWNAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSG 295

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIE 343
             F V Y PR S  +F+V       +++  +  GMRFKM FE E++     F GTI  ++
Sbjct: 296 QPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQ 355

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            ADP RW +S WR L+V WDE   +   + VS W +E   + P ++  P   P++
Sbjct: 356 VADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRK 410


>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
          Length = 703

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/405 (37%), Positives = 205/405 (50%), Gaps = 55/405 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LW ACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           RV +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG   +FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ-------------------- 256
            +GWS FV+ K+L+AGD+ +FLR E GEL VG+RRA R                      
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNNNSNNPYPG 237

Query: 257 ----------------------GNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR 294
                                 GNV  +      + +  +A A    + G  F V Y PR
Sbjct: 238 FSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPR 297

Query: 295 TSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDS 353
            S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +S
Sbjct: 298 ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAVQVADPIRWPNS 357

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
            WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 358 PWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 402


>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
 gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
 gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
          Length = 699

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/387 (37%), Positives = 202/387 (52%), Gaps = 42/387 (10%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GD   ++ ++LW ACAG + +VP  G  VYYFPQGH EQ  A+ +  + +      +P  
Sbjct: 13  GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSAR------VPPL 66

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE------NAVEKEPPPPPPPRFHVHSFC 152
           + CRV+ V+  A+ ++DEVFA++ L+P    D        A  +        R    SF 
Sbjct: 67  VPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFA 126

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG EW FRHI+RG PR
Sbjct: 127 KTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPR 186

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS-----SVISSH 267
           RHLL +GWS FV+ K+L AGD+ +F+R E G + VG+RRA R   ++       S I   
Sbjct: 187 RHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGW 246

Query: 268 SMHLGVL------------------------ATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
             + G++                         TA    +TG  F V Y PR S  EF V 
Sbjct: 247 DQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCVR 306

Query: 304 YDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRW 362
                 ++   +  GMRFKM FE E++     F GT+ G++ +DP RW  S WR L+V W
Sbjct: 307 AAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTW 366

Query: 363 DETSTIPRPERVSLWKIEPALAPPALN 389
           DE   +   +RV  W +E   + P L+
Sbjct: 367 DEPELLQNVKRVCPWLVELVSSMPNLH 393


>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
 gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
 gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
          Length = 695

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/387 (37%), Positives = 202/387 (52%), Gaps = 42/387 (10%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GD   ++ ++LW ACAG + +VP  G  VYYFPQGH EQ  A+ +  + +      +P  
Sbjct: 9   GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSAR------VPPL 62

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE------NAVEKEPPPPPPPRFHVHSFC 152
           + CRV+ V+  A+ ++DEVFA++ L+P    D        A  +        R    SF 
Sbjct: 63  VPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFA 122

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG EW FRHI+RG PR
Sbjct: 123 KTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPR 182

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS-----SVISSH 267
           RHLL +GWS FV+ K+L AGD+ +F+R E G + VG+RRA R   ++       S I   
Sbjct: 183 RHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGW 242

Query: 268 SMHLGVL------------------------ATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
             + G++                         TA    +TG  F V Y PR S  EF V 
Sbjct: 243 DQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCVR 302

Query: 304 YDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRW 362
                 ++   +  GMRFKM FE E++     F GT+ G++ +DP RW  S WR L+V W
Sbjct: 303 AAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTW 362

Query: 363 DETSTIPRPERVSLWKIEPALAPPALN 389
           DE   +   +RV  W +E   + P L+
Sbjct: 363 DEPELLQNVKRVCPWLVELVSSMPNLH 389


>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
          Length = 705

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/406 (36%), Positives = 204/406 (50%), Gaps = 56/406 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           RV +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RVASVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV--------------------------- 249
            +GWS FV+ K+L+AGD+ +FLR E G+L VG+                           
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSG 237

Query: 250 ----------------RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKP 293
                           R A    GN   +      + +  +A A    + G  F V Y P
Sbjct: 238 FLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 297

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +
Sbjct: 298 RASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
           S WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 403


>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
          Length = 417

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/384 (39%), Positives = 203/384 (52%), Gaps = 53/384 (13%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAGP+V +P    +V+YFPQGH E   A+ +  +    PV   P+ +LCRV +++
Sbjct: 11  QLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAVDFPSSP--PV---PALVLCRVASLK 65

Query: 108 LKAEPDTDEVFAQVTLLPESNQDEN----AVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
             A+ +TDEV+A++ L+P  N + +    AV        P      SF KTLT SD +  
Sbjct: 66  FMADTETDEVYAKILLMPLPNTELDLEHVAVFGSDNAEKPA-----SFAKTLTQSDANNG 120

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV R  A+   PPLD +  PP Q + A D+HG  W+FRHI+RG PRRHLL +GWS F
Sbjct: 121 GGFSVPRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLTTGWSTF 180

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP---SSVIS------SHSMHL--- 271
           V+ K+LVAGD+ +FLR ENG L VG+RRA R  GN P   S  +S      S  M +   
Sbjct: 181 VNHKKLVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESKMMMMNRN 240

Query: 272 ------------GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGM 319
                        VL  A  A S G  F V Y PR S  EF V       +++  +  GM
Sbjct: 241 GDWRGKGKLKAEAVLQAATLAAS-GQPFEVVYYPRASTPEFCVKASSVKAAMRVPWCCGM 299

Query: 320 RFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVR-----------WDETS- 366
           RFKM FE E++     F GT+  ++  DP RW +S WR  ++            WD    
Sbjct: 300 RFKMAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLFQLEELSTQVPQGLAWDNIGG 359

Query: 367 -TIPRPERVSLWKIEPALAPPALN 389
            +IP   R++  + E    PP  N
Sbjct: 360 PSIPPYNRLTAAQFEAFFHPPGAN 383


>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
           Japonica Group]
 gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
          Length = 760

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/415 (37%), Positives = 206/415 (49%), Gaps = 56/415 (13%)

Query: 35  VKRVGDPE--MALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ-QMP 91
           +K VG+ E    L  +LWHACAG +V +P    RVYYF QGH E  +      A   ++ 
Sbjct: 63  MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELG 122

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVE-------------KEP 138
              LP  +LCRV  VQ  A+ D+DEV+A++ L P +  +    E              EP
Sbjct: 123 PRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEP 182

Query: 139 PPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHG 198
            P  P      SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG
Sbjct: 183 SPEKPT-----SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHG 237

Query: 199 NEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG- 257
             W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR  +GEL VG+RRA R    
Sbjct: 238 VVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACG 297

Query: 258 --------NVPSSVISSHSMHL-------------------------GVLATAWHAVSTG 284
                   N P       S  L                           +  A    S+G
Sbjct: 298 GMECMSGWNAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSG 357

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIE 343
             F V Y PR S  +F+V       +++  +  GMRFKM FE E++     F GTI  ++
Sbjct: 358 QPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQ 417

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            ADP RW +S WR L+V WDE   +   + VS W +E   + P ++  P   P++
Sbjct: 418 VADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRK 472


>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
          Length = 704

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/406 (36%), Positives = 204/406 (50%), Gaps = 56/406 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           R+ +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV--------------------------- 249
            +GWS FV+ K+L+AGD+ +FLR E G+L VG+                           
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSG 237

Query: 250 ----------------RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKP 293
                           R A    GN   +      + +  +A A    + G  F V Y P
Sbjct: 238 FLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 297

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +
Sbjct: 298 RASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
           S WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 403


>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
          Length = 683

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/398 (37%), Positives = 201/398 (50%), Gaps = 61/398 (15%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    RV YFPQGH E    +     D   P   +P  +LCRV  V+
Sbjct: 18  QLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNV----DFGNP--RIPPLVLCRVSAVK 71

Query: 108 LKAEPDTDEVFAQVTLLPESNQDE----------NAVEKEPPPPPPPRFHVHSFCKTLTA 157
             A+P++DEV+A++ L+P  N +           N +E    P         SF KTLT 
Sbjct: 72  YLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPEKPA--------SFAKTLTQ 123

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  WRFRHI+RG PRRHLL 
Sbjct: 124 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLT 183

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-------------QQGNVPSSV- 263
           +GWS FV+ K LVAGD+ +FLR ENG+L VG+RRA R               GN  S   
Sbjct: 184 TGWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYR 243

Query: 264 -------------ISSHS---------MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFI 301
                        I +HS         +    +A A    + G  F + Y PR S  EF 
Sbjct: 244 GYSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFC 303

Query: 302 VPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKV 360
           V       +++  +  GM+FKM FE +++     F G I  +   DP RW +S WR L+V
Sbjct: 304 VKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQV 363

Query: 361 RWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            WDE   +   +RV+ W +E     P+++  P   P++
Sbjct: 364 TWDEPDLLQNVKRVNPWLVELVSHVPSIHLSPFSPPRK 401


>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
          Length = 690

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/415 (37%), Positives = 206/415 (49%), Gaps = 56/415 (13%)

Query: 35  VKRVGDPE--MALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ-QMP 91
           +K VG+ E    L  +LWHACAG +V +P    RVYYF QGH E  +      A   ++ 
Sbjct: 21  MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELG 80

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVE-------------KEP 138
              LP  +LCRV  VQ  A+ D+DEV+A++ L P +  +    E              EP
Sbjct: 81  PRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEP 140

Query: 139 PPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHG 198
            P  P      SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG
Sbjct: 141 SPEKPT-----SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHG 195

Query: 199 NEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG- 257
             W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR  +GEL VG+RRA R    
Sbjct: 196 VVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACG 255

Query: 258 --------NVPSSVISSHSMHL-------------------------GVLATAWHAVSTG 284
                   N P       S  L                           +  A    S+G
Sbjct: 256 GMECMSGWNAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSG 315

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIE 343
             F V Y PR S  +F+V       +++  +  GMRFKM FE E++     F GTI  ++
Sbjct: 316 QPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQ 375

Query: 344 DADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            ADP RW +S WR L+V WDE   +   + VS W +E   + P ++  P   P++
Sbjct: 376 VADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRK 430


>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
          Length = 647

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/402 (37%), Positives = 208/402 (51%), Gaps = 57/402 (14%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           + E +L  +LWHACAG +V +P    +V+YFPQGH E    S   V     P   +P+ +
Sbjct: 4   EAEKSLDPQLWHACAGSMVQIPPVNSKVFYFPQGHAEH---SLYPVDFSSSP--PIPALL 58

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLP----ESNQDENAV------EKEPPPPPPPRFHVH 149
           LCRV +V+  A+ +TDEV+A++ L+P    E + + +AV        E P          
Sbjct: 59  LCRVASVKFLADAETDEVYAKIMLVPLPNTEPDLENDAVFGGGSDNVEKPA--------- 109

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD +  PP Q + A+D+HG  W+FRHI+RG
Sbjct: 110 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRG 169

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR------QQGNVPSSV 263
            PRRHLL +GWS FV+ K+LVAGD+ +FLR ENGEL VG+RRA R      + G    + 
Sbjct: 170 TPRRHLLTTGWSSFVNHKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGND 229

Query: 264 ISSHSMHLGVLATAWHAVS------------------------TGTMFTVYYKPRTSPSE 299
           +S +    G L      ++                         G  F + Y PR S  E
Sbjct: 230 VSPYGGFSGFLKEDESKITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYYPRASTPE 289

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCL 358
           F V       +++  +   MRFKM FE E+      F GT+  +  ADP RW +S WR L
Sbjct: 290 FCVKASAVRAAMRVPWCSLMRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLL 349

Query: 359 KVRWDETSTIPRPERVSLWKIE--PALAPPALNSLPMPRPKR 398
           +V WDE   +   ERVS W +E  P + P  L+      P++
Sbjct: 350 QVTWDEPDLLQNVERVSPWLVELVPNMLPVHLSPFSTVTPRK 391


>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
          Length = 706

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/406 (36%), Positives = 204/406 (50%), Gaps = 56/406 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           R+ +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV--------------------------- 249
            +GWS FV+ K+L+AGD+ +FLR E G+L VG+                           
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSG 237

Query: 250 ----------------RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKP 293
                           R A    GN   +      + +  +A A    + G  F V Y P
Sbjct: 238 FLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 297

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +
Sbjct: 298 RASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
           S WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 403


>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
          Length = 705

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/406 (36%), Positives = 204/406 (50%), Gaps = 56/406 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           R+ +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV--------------------------- 249
            +GWS FV+ K+L+AGD+ +FLR E G+L VG+                           
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSG 237

Query: 250 ----------------RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKP 293
                           R A    GN   +      + +  +A A    + G  F V Y P
Sbjct: 238 FLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 297

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +
Sbjct: 298 RASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
           S WR L+V WDE   +   +RVS W +E     PA++  P  PR K
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKK 403


>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
          Length = 370

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/365 (40%), Positives = 190/365 (52%), Gaps = 46/365 (12%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  L  +LWHACAG +V +P    RVYYFPQGH E                  LPS +LC
Sbjct: 7   ERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR---ALPSLVLC 63

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPES-------NQDENAVEKEPPPPPPPRFHVHSFCKT 154
            V  V+  A+P+TDEVFA++ L+P +         DE +V+     P   R  + SF KT
Sbjct: 64  SVTGVRFLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVD-----PADAREKLSSFAKT 118

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG  W+FRHI+RG PRRH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRH 178

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG---------NVP----- 260
           LL +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RR  R            N P     
Sbjct: 179 LLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGAL 238

Query: 261 --------SSVISSHS--------MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPY 304
                     ++ SH         + +  +  A    ++G  F V Y PR S  EF+V  
Sbjct: 239 SAFLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKA 298

Query: 305 DQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWD 363
                +++N +  GMRFKM FE E++     F GTI   + ADP RW +S WR L+V  D
Sbjct: 299 ASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVLLD 358

Query: 364 ETSTI 368
               I
Sbjct: 359 HMFPI 363


>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
 gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/410 (35%), Positives = 208/410 (50%), Gaps = 59/410 (14%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLP--S 97
           + +  L ++LWHACAG +V +P    +V+YFPQGH E         A + +   +LP  S
Sbjct: 14  EADKCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEH--------ACEPVDFRNLPRVS 65

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-----PPPPPRFHVHSFC 152
             LCRV +++  A+P+TDEVFA++ L+P ++ + +  ++E                 SF 
Sbjct: 66  HNLCRVSDIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVSFA 125

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GGFSV R  A+   P LD +  PP Q L AKD+HG  W+FRHI+RG PR
Sbjct: 126 KTLTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPR 185

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN-------------- 258
           RHLL +GWS FV+ K+L+AGD+ +F R ENG+L VGVRRA R  G               
Sbjct: 186 RHLLTTGWSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSA 245

Query: 259 VPS-----------------------------SVISSHSMHLGVLATAWHAVSTGTMFTV 289
           VPS                             S++    +    +  A    + G  F V
Sbjct: 246 VPSGGFGAFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEV 305

Query: 290 YYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQ 348
            Y PR +  EF V       +++  +  GMRFKM FE E++     F GT+  ++ AD  
Sbjct: 306 VYYPRANTPEFCVKASLVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAADSL 365

Query: 349 RWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            W  S WR L+V WDE   +   +RVS W +E A    A++  P   P++
Sbjct: 366 WWPHSPWRLLQVTWDEPDLLQNVKRVSPWLVELASNMAAIHFPPFSSPRK 415


>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
 gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
          Length = 381

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/352 (40%), Positives = 190/352 (53%), Gaps = 30/352 (8%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +  +LW ACAG + TVP  G  VYYFPQGH E        +A  ++    +P+ + C
Sbjct: 15  ERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALG----LAAPELSAARVPALVPC 70

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           RV +V+  A+PDTDEVFA++ L+P    ++  VE++            SF KTLT SD +
Sbjct: 71  RVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDAN 130

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
             GGFSV R  A+   P LD +  PP Q + AKD+HG  W FRHI+RG PRRHLL +GWS
Sbjct: 131 NGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWS 190

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR------------------QQGNVPSSV 263
            FV+ K+LVAGD+ +FLRG+ G+L VG+RRA R                  Q G +    
Sbjct: 191 TFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGN 250

Query: 264 ISSHSMHLGV-------LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
            S  +   G        L  A    + G  F V Y PR S  EF V       +++  + 
Sbjct: 251 ASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWC 310

Query: 317 IGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETST 367
            GMRFKM FE E++     F GT+  ++ ADP RW  S WR L+VR++  +T
Sbjct: 311 PGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVRYNIYTT 362


>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
          Length = 706

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 147/406 (36%), Positives = 203/406 (50%), Gaps = 56/406 (13%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E +L  +LWHACAG +V +P     V+YFPQGH E   A  +  A +      +P  ILC
Sbjct: 4   ERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPR------VPPLILC 57

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLT 156
           R+ +V+  A+ +TDEV++++TLLP    D     +  +   P P         SF KTLT
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLT 117

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLL 177

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV--------------------------- 249
            +GWS FV+ K+L+AGD+ +FLR E G+L VG+                           
Sbjct: 178 TTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSG 237

Query: 250 ----------------RRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKP 293
                           R A    GN   +      + +  +A A    + G  F V Y P
Sbjct: 238 FLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 297

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R S  EF V       +++  +  GMRFKM FE E++     F GT+  ++ ADP RW +
Sbjct: 298 RASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 357

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PRPK 397
           S WR L+V WDE   +   +R S W +E     PA++  P  PR K
Sbjct: 358 SPWRLLQVAWDEPDLLQNVKRASPWLVELVSNMPAIHLSPFSPRKK 403


>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
          Length = 443

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/406 (37%), Positives = 209/406 (51%), Gaps = 64/406 (15%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
            L ++LWHACAG +V +P    +V+YFPQGH E    +   V    +P   +P  ILCRV
Sbjct: 8   CLDSQLWHACAGGMVQMPPMNSKVFYFPQGHAEH---TLGNVDFSMLP--KIPPLILCRV 62

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQD---ENAV----EKEPPPPPPPRFHVHSFCKTLT 156
             V+  A+ +TDEV+A++ L+P  N +   E+AV      E    P       SF KTLT
Sbjct: 63  GAVKYLADVETDEVYAKIRLVPVGNNEPEFEDAVLGSSASETAEKP------TSFAKTLT 116

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
            SD +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W+FRHI+RG PRRHLL
Sbjct: 117 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLL 176

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNV------------PSSVI 264
            +GWS FV+ K+LVAGD+ +FLR +NG+L VG+RRA R  GN+            P S  
Sbjct: 177 TTGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKR-CGNIGLDAPSGWNTGAPGS-Y 234

Query: 265 SSHSMHL----------GV---------------------LATAWHAVSTGTMFTVYYKP 293
              S +L          G+                     +  A +  +TG  F V Y P
Sbjct: 235 GGFSAYLREDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYP 294

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRD 352
           R +  EF V       ++   +  G+RFKM FE E++     F GTI  ++ ADP  W +
Sbjct: 295 RANTPEFCVRASSVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADPIHWPN 354

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           S WR L+V WDE   +   + VS W +E     P ++  P   P++
Sbjct: 355 SPWRLLQVTWDEPDLLQNVKHVSPWLVELVSNMPMIHLSPFSPPRK 400


>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
          Length = 739

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/216 (56%), Positives = 158/216 (73%), Gaps = 3/216 (1%)

Query: 193 AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA 252
           AKDLHGNEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA
Sbjct: 2   AKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRA 61

Query: 253 MRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIK 312
            R Q  +PSSV+SS SMH+G+LA A HA ST + FT++Y PR SPSEF++P  +Y++++ 
Sbjct: 62  NRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVY 121

Query: 313 NN-YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
           +   S+GMRF+M FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R 
Sbjct: 122 HTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQ 181

Query: 372 ERVSLWKIEPALAPPALNSLPMP-RPKRPRSNMLPS 406
            RVSLW+IEP    P   S P P R KRP    LPS
Sbjct: 182 PRVSLWEIEPLTTFPMYPS-PFPLRLKRPWPTGLPS 216


>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
 gi|238015272|gb|ACR38671.1| unknown [Zea mays]
          Length = 534

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/216 (56%), Positives = 158/216 (73%), Gaps = 3/216 (1%)

Query: 193 AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA 252
           AKDLHGNEW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+  +N +L +G+RRA
Sbjct: 2   AKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRA 61

Query: 253 MRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIK 312
            R Q  +PSSV+SS SMH+G+LA A HA ST + FT++Y PR SPSEF++P  +Y++++ 
Sbjct: 62  NRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVY 121

Query: 313 NN-YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
           +   S+GMRF+M FE EE+  +R+ GTI GI D D  RW +S WR +KV WDE++   R 
Sbjct: 122 HTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQ 181

Query: 372 ERVSLWKIEPALAPPALNSLPMP-RPKRPRSNMLPS 406
            RVSLW+IEP    P   S P P R KRP    LPS
Sbjct: 182 PRVSLWEIEPLTTFPMYPS-PFPLRLKRPWPTGLPS 216


>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
 gi|194699576|gb|ACF83872.1| unknown [Zea mays]
 gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
          Length = 373

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/362 (39%), Positives = 187/362 (51%), Gaps = 40/362 (11%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           +K  G+ E  L  +LWHACAG +V +P    RVYYFPQGH E                  
Sbjct: 1   MKEAGE-ERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARP 59

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-----PPPPPRFHVH 149
           LP  +LC V  V+  A+P+TDEVFA++ L+P +  +   VE   P      P   R  + 
Sbjct: 60  LPPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGE---VEFGEPREFGIDPEDAREKLS 116

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG  W+FRHIFRG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRG 176

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
            PRRHLL +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RRA R        +   ++ 
Sbjct: 177 TPRRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAP 236

Query: 270 HLGVLAT------------------------------AWHAVSTGTMFTVYYKPRTSPSE 299
             G L+                               A    ++G  F V Y PR S  E
Sbjct: 237 VYGALSAFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPE 296

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCL 358
           F+V       +++N +  GMRFKM FE E++     F GTI   + AD  RW +S WR L
Sbjct: 297 FVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLL 356

Query: 359 KV 360
           +V
Sbjct: 357 QV 358


>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
          Length = 690

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/402 (37%), Positives = 203/402 (50%), Gaps = 54/402 (13%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    RVYYFPQGH E  +      A   +P   +P+ +LCRV  V+
Sbjct: 24  QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGH----AHADLPAGRVPALVLCRVDAVR 79

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS 167
             A+PDTDEV A+V L P    + +  +   P     +    SF KTLT SD +  GGFS
Sbjct: 80  FLADPDTDEVLARVRLAPVRPNEPDHADAAAPGAREDK--PASFAKTLTQSDANNGGGFS 137

Query: 168 VLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSK 227
           V R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PRRHLL +GWS FV+ K
Sbjct: 138 VPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQK 197

Query: 228 RLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM------------------ 269
           RLVAGD+ +F+R  NG+L VG+RRA  ++G +       H                    
Sbjct: 198 RLVAGDSIVFMRTGNGDLCVGIRRA--KKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFL 255

Query: 270 -----------HLGVL------ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIK 312
                       + VL        A +  ++G  F V Y PR S  EF V       +++
Sbjct: 256 RGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCVKAGAVRAAMR 315

Query: 313 NNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
             +  GMRFKM FE E++     F GT+  ++ ADP RW +S WR L+            
Sbjct: 316 TQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQ----------NV 365

Query: 372 ERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           +RVS W +E   + PA++ L    P   +   +P  P+   L
Sbjct: 366 KRVSPWLVELVSSTPAIHHLTPFSPPSRKKLCIPLYPEGHQL 407


>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 688

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 162/446 (36%), Positives = 224/446 (50%), Gaps = 73/446 (16%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-D 94
           +++ + E  L + LWHACAG +V +P    +V+YFPQGH E      +        VY  
Sbjct: 5   EKLKEVEKCLDSRLWHACAGGMVQMPVVNAKVFYFPQGHAEHACGPVD------FRVYPK 58

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLP----ESNQDENAV-------EKEPPPPPP 143
           +P  I C+V  ++  A+P+TDEV+ ++ L+P    E + +++AV        K+  P   
Sbjct: 59  IPPFIQCKVGAIKYMADPETDEVYVKLRLVPLTRNEGDFEDDAVGGINGSENKDKSP--- 115

Query: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203
                 SF KTLT SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  W+F
Sbjct: 116 ------SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKF 169

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN----- 258
           RHI+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR E  +LRVG+RRA R  G      
Sbjct: 170 RHIYRGTPRRHLLTTGWSSFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPE 229

Query: 259 -------------VPSSVIS-------SHSMHLGVLATAW------HAVSTGTM------ 286
                        +P    S       S  +  G+   A         +   T+      
Sbjct: 230 APAGWNSGGGIRPMPYGGFSAFLREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQP 289

Query: 287 FTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDA 345
           F V Y PR S  EF V  +    +++  +  GMRFKM FE E++     F GTI  +  A
Sbjct: 290 FEVVYYPRASAPEFCVKANLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFA 349

Query: 346 DPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALN-SLPMPRPKRPRSNML 404
           DP RW +S WR L+V WDE   +   +RVS W +E     P ++ S    + K+PR    
Sbjct: 350 DP-RWPNSPWRLLQVTWDEPELLQNVKRVSPWLVEIVSNMPTIHLSHYSTQQKKPR---F 405

Query: 405 PSSPDSSVLTREGSSKLNVDPSSATG 430
           P  PD S    +G   L   PS+  G
Sbjct: 406 PQHPDFSF---DGQISLPAFPSNFLG 428


>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
          Length = 699

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/387 (36%), Positives = 198/387 (51%), Gaps = 42/387 (10%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GD   ++ ++LW ACAG + +VP  G  VYYFPQGH EQ  A+ +  + +      +P  
Sbjct: 13  GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSAR------VPPL 66

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE------NAVEKEPPPPPPPRFHVHSFC 152
           + CRV+ V+  A+ ++DEVFA++ L+P    D        A  +        R    SF 
Sbjct: 67  VPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFA 126

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +   G    R  A+   P LD S +PP Q + AKD+HG EW FRHI+RG PR
Sbjct: 127 KTLTQSDANNGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPR 186

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS-----SVISSH 267
           RHLL +GWS FV+ K+L AGD+ +F+R E G + VG+RRA R   ++       S I   
Sbjct: 187 RHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGW 246

Query: 268 SMHLGVL------------------------ATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
             + G++                         TA    +TG  F V Y PR S  EF V 
Sbjct: 247 DQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCVR 306

Query: 304 YDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRW 362
                 ++   +  GMRFKM FE E++     F GT+ G++ +DP RW  S WR L+V W
Sbjct: 307 AAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTW 366

Query: 363 DETSTIPRPERVSLWKIEPALAPPALN 389
           DE   +   +RV  W +E   + P L+
Sbjct: 367 DEPELLQNVKRVCPWLVELVSSMPNLH 393


>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
          Length = 1067

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 116/219 (52%), Positives = 150/219 (68%), Gaps = 9/219 (4%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQV------EASTNQVADQQMPVY-DLP 96
           A+ +ELWHACAGPLV++P  G  V YFPQGH EQV       AS  +  D  +P Y +LP
Sbjct: 40  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLP 99

Query: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156
           SK++C +  V L A+PDTDEV+AQ+TL P +   + A++         R  +  FCKTLT
Sbjct: 100 SKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKQARPQMEFFCKTLT 159

Query: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216
           ASDTSTHGGFSV RR A++  PPLD S QPP QEL A+D+H N W FRHI+RGQP+RHLL
Sbjct: 160 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLL 219

Query: 217 QSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVRRAM 253
            +GWS+FVS KRL AGD+ I +R   ++ ++ +G+R  M
Sbjct: 220 TTGWSLFVSGKRLFAGDSVIVVRRHCDSNQISLGMRFRM 258



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 15/122 (12%)

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGT 338
           H ++TG    V  K R    + ++   ++ +S  N  S+GMRF+M FE EE   +R+ GT
Sbjct: 217 HLLTTGWSLFVSGK-RLFAGDSVIVVRRHCDS--NQISLGMRFRMMFETEELGTRRYMGT 273

Query: 339 IVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
           I GI D DP            V WDE++   R  RVS+W+IEP  AP  L   P    KR
Sbjct: 274 ITGISDLDP------------VGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFGVKR 321

Query: 399 PR 400
           PR
Sbjct: 322 PR 323


>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/357 (39%), Positives = 192/357 (53%), Gaps = 40/357 (11%)

Query: 47  TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINV 106
            +LW ACAG + TVP  G  VYYFPQGH EQ  A+ +      +    +P+ + CRV  V
Sbjct: 22  AQLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAVD------LSAACVPALLPCRVSAV 75

Query: 107 QLKAEPDTDEVFAQVTLLPESNQD-----ENAVEKEPPPPPPPRFHVHSFCKTLTASDTS 161
           +  A+  +DEVFA++ L+P  + D      +A  +  P    P+    SF KTLT SD +
Sbjct: 76  RFMADAHSDEVFAKIRLVPLRHGDPAVDVGDAAAQGRPQDDRPK--PASFAKTLTQSDAN 133

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
             GGFSV R  A+   P LD S +PP Q +  +D+HG+E++FRHI+RG PRRHLL +GWS
Sbjct: 134 NGGGFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTPRRHLLTTGWS 193

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH-SMHLGVLATAWHA 280
            FV+ K+L+AGD+ +FLR + GE+ VGVRRA R   +   S    +  +  G  A +  A
Sbjct: 194 NFVNQKKLLAGDSIVFLRSDGGEVHVGVRRAKRVFCDEGHSGWDHYRGLMRGGNAGSGDA 253

Query: 281 VSTGTM-----------------FTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKM 323
            + G +                 F V Y PR S  EF V       +++  +  GMRFKM
Sbjct: 254 AAKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCVRAGAVRAAMQVQWRPGMRFKM 313

Query: 324 RFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKI 379
            FE E++     F GT+ GI  ADP RW  S WR L+VR         P   +LW+ 
Sbjct: 314 AFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQVR--------TPPHGTLWRF 362


>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
          Length = 680

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/421 (35%), Positives = 201/421 (47%), Gaps = 84/421 (19%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    RV YFPQGH E    +     D   P   +P  +LCRV  V+
Sbjct: 11  QLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNV----DFGNP--RIPPLVLCRVSAVK 64

Query: 108 LKAEPDTDEVFAQVTLLPESNQDE----------NAVEKEPPPPPPPRFHVHSFCKTLTA 157
             A+P++DEV+A++ L+P  N +           N +E    P         SF KTLT 
Sbjct: 65  YLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPEKPA--------SFAKTLTQ 116

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  A+   P LD S  PP Q + AKD+HG  WRFRHI+RG PRRHLL 
Sbjct: 117 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLT 176

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-------------QQGNVPSSV- 263
           +GWS FV+ K LVAGD+ +FLR ENG+L VG+RRA R               GN  S   
Sbjct: 177 TGWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYR 236

Query: 264 -------------ISSHS---------MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFI 301
                        I +HS         +    +A A    + G  F + Y PR S  EF 
Sbjct: 237 GYSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFC 296

Query: 302 VPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWR---- 356
           V       +++  +  GM+FKM FE +++     F G I  +   DP RW +S WR    
Sbjct: 297 VKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQV 356

Query: 357 -------------------CLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
                               L+V WDE   +   +RV+ W +E     P+++  P   P+
Sbjct: 357 LEYEIQKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVELVSHVPSIHLSPFSPPR 416

Query: 398 R 398
           +
Sbjct: 417 K 417


>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
          Length = 715

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 155/409 (37%), Positives = 210/409 (51%), Gaps = 53/409 (12%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           A+ ++LW ACAG + +VP  G  VYYFPQGH EQ   +        MP   +P  + CRV
Sbjct: 19  AVDSQLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGA----GAVDMP--RVPDLVPCRV 72

Query: 104 INVQLKAEPDTDEVFAQVTLLP------ESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
             V+  A+P +DEVFA++ LLP       ++  E A  +EP           SF KTLT 
Sbjct: 73  SAVRFMADPQSDEVFAKIRLLPLRRGEPVADVGEAAAAREPLQQDADNNKPASFAKTLTQ 132

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  A+   P LD   +PP Q +  +D+HG E++FRHI+RG PRRHLL 
Sbjct: 133 SDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIYRGTPRRHLLT 192

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGE-----NGELRVGVRRAMRQQGNV----PSSVISSHS 268
           +GWS FV+ K+L+AGD+ +FLR        GE+ VG+RRA R         PSS  S   
Sbjct: 193 TGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVEGPSSAASGWD 252

Query: 269 MHLGVL-------------------------ATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
            + G++                         A A    + G +F V Y PR S  EF V 
Sbjct: 253 HYRGLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVYYPRASTPEFCVR 312

Query: 304 YDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRW 362
                 +++  +  GMRFKM FE E++     F GT+ G+  ADP  W  S WR L+V W
Sbjct: 313 AGAVKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVHWPQSPWRLLQVSW 372

Query: 363 DETSTIPRPERVSLWKIEPALAPPALN--SLPMPRPKRPRSNMLPSSPD 409
           DE   +   +RV  W +E   + P L+  S   PR K+PR   +P+  D
Sbjct: 373 DEPELLQNVKRVCPWLVELVSSMPNLHLPSFSPPR-KKPR---IPTCAD 417


>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
          Length = 360

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/350 (39%), Positives = 182/350 (52%), Gaps = 40/350 (11%)

Query: 35  VKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD 94
           +K  G+ E  L  +LWHACAG +V +P    RVYYFPQGH E                  
Sbjct: 1   MKEAGE-ERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARP 59

Query: 95  LPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPP-----PPPPPRFHVH 149
           LP  +LC V  V+  A+P+TDEVFA++ L+P +  +   VE   P      P   R  + 
Sbjct: 60  LPPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGE---VEFGEPREFGIDPEDAREKLS 116

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG  W+FRHIFRG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRG 176

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR--------------- 254
            PRRHLL +GWS FV+ K+LVAGD+ +FLR E+GEL VG+RRA R               
Sbjct: 177 TPRRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAP 236

Query: 255 -----------QQGNV---PSSVISSHS-MHLGVLATAWHAVSTGTMFTVYYKPRTSPSE 299
                      ++G +   P   +     + +  +  A    ++G  F V Y PR S  E
Sbjct: 237 VYGALSAFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPE 296

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQ 348
           F+V       +++N +  GMRFKM FE E++     F GTI   + AD Q
Sbjct: 297 FVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADNQ 346


>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
 gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
          Length = 392

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/358 (38%), Positives = 188/358 (52%), Gaps = 42/358 (11%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GD   ++ ++LW ACAG + +VP  G  VYYFPQGH EQ  A+ +  + +      +P  
Sbjct: 13  GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSAR------VPPL 66

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE------NAVEKEPPPPPPPRFHVHSFC 152
           + CRV+ V+  A+ ++DEVFA++ L+P    D        A  +        R    SF 
Sbjct: 67  VPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFA 126

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GGFSV R  A+   P LD S +PP Q + AKD+HG EW FRHI+RG PR
Sbjct: 127 KTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPR 186

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS-----SVISSH 267
           RHLL +GWS FV+ K+L AGD+ +F+R E G + VG+RRA R   ++       S I   
Sbjct: 187 RHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGW 246

Query: 268 SMHLGVL------------------------ATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
             + G++                         TA    +TG  F V Y PR S  EF V 
Sbjct: 247 DQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCVR 306

Query: 304 YDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKV 360
                 ++   +  GMRFKM FE E++     F GT+ G++ +DP RW  S WR L+V
Sbjct: 307 AAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 364


>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
 gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
          Length = 671

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/394 (34%), Positives = 196/394 (49%), Gaps = 49/394 (12%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  + +  WH C G +V +P    +V+YFPQG+ E    + +        +  +P+ ILC
Sbjct: 6   EKCVDSLFWHVCTGSMVQIPPVNSKVFYFPQGYAEHTFTNVDFTV-----LARIPAMILC 60

Query: 102 RVINVQLKAEPDTDEVFAQVTLLP-ESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDT 160
           RV  V+  A+ +TDEV+A++ L+P E  +D++ VE+   P          F KTLT SD 
Sbjct: 61  RVDAVKFLADTETDEVYAKIRLIPVEDFEDDSVVEETEKPA--------FFAKTLTQSDA 112

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           +  GGFSV R  A+   P LD +  PP Q + AKD+HG  W FRHI+RG PRRHLL SGW
Sbjct: 113 NNGGGFSVPRYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSGW 172

Query: 221 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP---SSVISSHSMHLGVLATA 277
           S FV+ K+LVAG + +F++ EN EL VG+RR  R     P   S   S+   + G +   
Sbjct: 173 SAFVNKKKLVAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFVTED 232

Query: 278 WHAVSTGTM------------------------------FTVYYKPRTSPSEFIVPYDQY 307
            ++ + G +                              F + Y P  S  E+ V     
Sbjct: 233 ENSSTNGNLISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVKASSV 292

Query: 308 MESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETS 366
             ++   +  GMRFKM FE E+  +   F G+I  ++  DP RW  S WR L+V WDE  
Sbjct: 293 RAAMSVQWCSGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTWDEPD 352

Query: 367 TIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
            +   + V+ W +E     P +N L    P R R
Sbjct: 353 LLQNVKSVNPWLVELVSNMPDIN-LSHNSPPRKR 385


>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
 gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
          Length = 379

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/377 (38%), Positives = 188/377 (49%), Gaps = 56/377 (14%)

Query: 35  VKRVGDPE--MALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQ-QMP 91
           +K VG+ E    L  +LWHACAG +V +P    RVYYF QGH E  +      A   ++ 
Sbjct: 1   MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELG 60

Query: 92  VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVE-------------KEP 138
              LP  +LCRV  VQ  A+ D+DEV+A++ L P +  +    E              EP
Sbjct: 61  PRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEP 120

Query: 139 PPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHG 198
            P  P      SF KTLT SD +  GGFSV R  A+   P LD    PP Q + AKD+HG
Sbjct: 121 SPEKPT-----SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHG 175

Query: 199 NEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG- 257
             W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR  +GEL VG+RRA R    
Sbjct: 176 VVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACG 235

Query: 258 --------NVPSSVISSHSMHL-------------------------GVLATAWHAVSTG 284
                   N P       S  L                           +  A    S+G
Sbjct: 236 GMECMSGWNAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSG 295

Query: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIE 343
             F V Y PR S  +F+V       +++  +  GMRFKM FE E++     F GTI  ++
Sbjct: 296 QPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQ 355

Query: 344 DADPQRWRDSKWRCLKV 360
            ADP RW +S WR L+V
Sbjct: 356 VADPNRWPNSPWRLLQV 372


>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
 gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
 gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
          Length = 222

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 115/224 (51%), Positives = 148/224 (66%), Gaps = 9/224 (4%)

Query: 27  NSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVA 86
           N  S  SG+  +   +  +Y +LW  CAGPL  +P+ GE+VYYFPQGHIE VEAST +  
Sbjct: 8   NVQSELSGI--IDGSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREEL 65

Query: 87  DQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF 146
           ++  P  DLPSK+ CRVI + LK E ++DE + ++TL+P++ Q     E E    P    
Sbjct: 66  NELQPNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRPI--- 122

Query: 147 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
            V+SF K LTASDTS  G FSV  +HA ECLPPLDMS+  P QEL A DLHGN+WRF+H 
Sbjct: 123 -VNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHS 181

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVR 250
           +R  PR     +GW+ F +SK+LV GD  +F RGE GELRVG+R
Sbjct: 182 YR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222


>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
           truncatula]
          Length = 648

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 148/425 (34%), Positives = 211/425 (49%), Gaps = 61/425 (14%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDL 95
           K++ +   ++  +LWHA AG +V +P    +V+YFPQGH E      N  +  ++P +  
Sbjct: 19  KKLKNVNKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF-- 76

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLPES-NQ---DENAVEKEPPPPPPPRFHVHSF 151
              I CRV  ++  A  +TDEV+A++ L+P + NQ   D + V          +    SF
Sbjct: 77  ---IPCRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQ--SF 131

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFS  R  A+   P LD S  PP Q++  KD+HG +W FRH++RG P
Sbjct: 132 AKTLTQSDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTP 191

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ--------------- 256
           +RHLL +GWS FVS K+L +GD+ +FLR ENG+L VG+RRA R+                
Sbjct: 192 KRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSG 251

Query: 257 ---------GNVPSS-----------------VISSHSMHLGVLAT--AWHAVSTGTM-- 286
                    G  PS                  +IS   M  G +       AV  GT   
Sbjct: 252 IGICAAPPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQ 311

Query: 287 -FTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIED 344
            F V Y PR+   EF V       +++  +  GMRFKM  E E++     F GT+  ++ 
Sbjct: 312 PFDVVYYPRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQA 371

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNML 404
           ADP  W DS WR L+V WDE   +   +RV+ W++E     P++   P   P++     L
Sbjct: 372 ADPS-WSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLR--L 428

Query: 405 PSSPD 409
           P  PD
Sbjct: 429 PQLPD 433


>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
 gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
          Length = 1252

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 148/425 (34%), Positives = 211/425 (49%), Gaps = 61/425 (14%)

Query: 36  KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDL 95
           K++ +   ++  +LWHA AG +V +P    +V+YFPQGH E      N  +  ++P +  
Sbjct: 19  KKLKNVNKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF-- 76

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLPES-NQ---DENAVEKEPPPPPPPRFHVHSF 151
              I CRV  ++  A  +TDEV+A++ L+P + NQ   D + V          +    SF
Sbjct: 77  ---IPCRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQ--SF 131

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD +  GGFS  R  A+   P LD S  PP Q++  KD+HG +W FRH++RG P
Sbjct: 132 AKTLTQSDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTP 191

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ--------------- 256
           +RHLL +GWS FVS K+L +GD+ +FLR ENG+L VG+RRA R+                
Sbjct: 192 KRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSG 251

Query: 257 ---------GNVPSS-----------------VISSHSMHLGVLAT--AWHAVSTGTM-- 286
                    G  PS                  +IS   M  G +       AV  GT   
Sbjct: 252 IGICAAPPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQ 311

Query: 287 -FTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIED 344
            F V Y PR+   EF V       +++  +  GMRFKM  E E++     F GT+  ++ 
Sbjct: 312 PFDVVYYPRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQA 371

Query: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNML 404
           ADP  W DS WR L+V WDE   +   +RV+ W++E     P++   P   P++     L
Sbjct: 372 ADPS-WSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLR--L 428

Query: 405 PSSPD 409
           P  PD
Sbjct: 429 PQLPD 433



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/346 (37%), Positives = 178/346 (51%), Gaps = 43/346 (12%)

Query: 49   LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
            LWHA AG +V +P    +V+YFPQGH E      N  A  ++P +     I CRV +++ 
Sbjct: 810  LWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF-----IPCRVEDIRY 864

Query: 109  KAEPDTDEVFAQVTLLPES-NQ---DENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
             A  +TDEV+A++ L+P + NQ   D + V          +    SF KTLT SD +  G
Sbjct: 865  MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQ--SFAKTLTQSDANNGG 922

Query: 165  GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
            GFS  R  A+   P +D S  PP Q +  KD+HG +W FRH++RG P+RHLL +GWS FV
Sbjct: 923  GFSCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFV 982

Query: 225  SSKRLVAGDAFIFLRGENGELRVGVRR-------------------------AMRQQGNV 259
            S K+L +GD+ +FLR ENGELRVG+ R                          +R+ G  
Sbjct: 983  SDKKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEEDNKLRRNGKG 1042

Query: 260  PSSVISSHSMHLGVLAT--AWHAVSTGTM---FTVYYKPRTSPSEFIVPYDQYMESIKNN 314
               +IS   M  G +       AV  GT    F V Y PR+   EF V       +++  
Sbjct: 1043 NGLLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGITLQIR 1102

Query: 315  YSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLK 359
            +  GMRFKM  E E++     F GT+  ++ ADP  W DS WR L+
Sbjct: 1103 WCPGMRFKMPIETEDSSRISWFIGTVASVQAADPS-WPDSLWRLLQ 1147


>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
 gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
          Length = 593

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/429 (35%), Positives = 209/429 (48%), Gaps = 52/429 (12%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           +L  +LW A AG  V +P    RVYYFPQGH++Q   +T+   +    +   P  ILC V
Sbjct: 15  SLNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQ---ATSLPNNLSPLLLSRP-YILCSV 70

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
             V   A+P TDEVFA++ L P ++   N   + P         + SF K LT SD +  
Sbjct: 71  SAVHFLADPKTDEVFAKLFLQPLNDFTVN-FPRIPVIEADDGERISSFAKILTPSDANNG 129

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV R  AD   PPLD S  PP Q L   D+HG  W FRHI+RG PRRHLL +GWS F
Sbjct: 130 GGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSKF 189

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV---------- 273
           V++K+LVAGD+ +F++   G + +G+RRA+R   N  SS + S    L +          
Sbjct: 190 VNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGVRSRVD 249

Query: 274 --------LATAWHA---------------VSTGTMFTVYYKPRTSPSEFIVPYDQYMES 310
                    A + H                 + G  F V Y PR   S+F++  +    +
Sbjct: 250 DEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKAEVVDAA 309

Query: 311 IKNNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIP 369
           +   +  GMR KM  E +++     F G +  +   D   WR S WR L + WDE   + 
Sbjct: 310 MSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRMLHITWDEPEVLQ 369

Query: 370 RPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSAT 429
             + VS W++E     P+L++ P P  KR R         S VLT +G      DP S T
Sbjct: 370 TSKWVSPWQVELLSTTPSLHT-PFPPLKRTRGV-------SGVLT-DGDG----DPFSIT 416

Query: 430 GFSRVLQGQ 438
           GF+    GQ
Sbjct: 417 GFTNSTTGQ 425


>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
          Length = 714

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/433 (36%), Positives = 206/433 (47%), Gaps = 82/433 (18%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
            L  +LWHACAG +V +P  G +V YFPQGH EQ  AST +     +P   +P    CRV
Sbjct: 35  GLDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQA-ASTPEFPRTLVPNGSVP----CRV 89

Query: 104 INVQLKAEPDTDEVFAQVTLLPE---SNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDT 160
           ++V   A+ +TDEVFA++ L PE   S QD        PP   P     SF KTLT SD 
Sbjct: 90  VSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPA----SFAKTLTQSDA 145

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           +  GGFS+ R  A+   PPLD    PP Q + AKD+HG  W+FRHI+RG PRRHLL +GW
Sbjct: 146 NNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGW 205

Query: 221 SVFVSSK-----------RLVAGDAFIFLR------------------------------ 239
           S FV+ K           R+ +G+  + +R                              
Sbjct: 206 STFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSRWE 265

Query: 240 --------------GENG-ELRVGVRRAMRQQGNVPSSVISSHSMHL---GVLATAWHAV 281
                         G+NG  L   +R     QG+  +S  +     +    VL  A  AV
Sbjct: 266 VKGTESFSDFLGGVGDNGYALNSSIRS--ENQGSPTTSSFARDRARVTAKSVLEAAALAV 323

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIV 340
           S G  F V Y PR S +EF V       +++ ++  GMRFKM FE E++     F GTI 
Sbjct: 324 S-GERFEVVYYPRASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIA 382

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE-----PALAPPALNSLPMPR 395
            ++ ADP  W  S WR L+V WDE   +    RVS W++E     P   PP   SLP  +
Sbjct: 383 AVQAADPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLELVATLPMQLPPV--SLPKKK 440

Query: 396 PKRPRSNMLPSSP 408
            +  +   LP  P
Sbjct: 441 LRTVQPQELPLQP 453


>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
 gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
          Length = 622

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/380 (36%), Positives = 197/380 (51%), Gaps = 33/380 (8%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           +W A AG  V +P  G RVYYFPQGH E    ++  V    MP +     ILCRV++V+ 
Sbjct: 15  VWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTSPAVMSPGMPAF-----ILCRVLSVRF 69

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSV 168
            AE DTDEV+A++ L P S  + + V             + SF K LT SD +  GGFSV
Sbjct: 70  LAESDTDEVYARIFLHPISQSEVDEVTMREEEVV--EDEIVSFVKILTPSDANNGGGFSV 127

Query: 169 LRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 228
            R  AD   P LD   +PP Q L+ +D+ G  W FRHI+RG PRRHLL +GWS FV+SK+
Sbjct: 128 PRFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKQ 187

Query: 229 LVAGDAFIFL-RGENGELRVGVRRAMRQ----QGNVPSSVISSHSMHLGVLATAWHAVST 283
           LVAGD+ +F+ R  N +L VGVRRA+R+    Q    S ++  H  + G    +W  +  
Sbjct: 188 LVAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINNGGSPDVSW-GIRK 246

Query: 284 GTM-----------------FTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFE 326
           G M                 F V   PR + + F+V   +   ++   +++GMR KM  E
Sbjct: 247 GRMTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVKAQEVQMALNMPWTVGMRVKMAVE 306

Query: 327 GEEAPEQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
            E++     + GT+  +   +   WR S WR L++ W+E        RV+ W++E    P
Sbjct: 307 AEDSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRVNPWQVE--CFP 364

Query: 386 PALNSLPMPRPKRPRSNMLP 405
           P    LP  +  +  + +LP
Sbjct: 365 PIPQFLPPSKKIKLPNGLLP 384


>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
           [Vitis vinifera]
          Length = 593

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 184/372 (49%), Gaps = 48/372 (12%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           +W ACAG  V +P    RVYYFPQGH+EQ  AS+  V      V+  PS +LCRV+ V  
Sbjct: 16  IWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLSPL--VFSKPS-VLCRVVAVWF 70

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKE-------PPPPPPPRFHVHSFCKTLTASDTS 161
            A+ DTDEVFA++ L P     E+   +                  V SF K LT+SD +
Sbjct: 71  LADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDAN 130

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
             GGFSV R  AD   PPL+    PP Q L   DL G +W FRHI+RG PRRHLL +GWS
Sbjct: 131 NGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGWS 190

Query: 222 VFVSSKRLVAGDAFIFL-RGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 280
            FV+ K+LVAGD+ +F+ R  N EL +GVRR  R   N       S       LA A  A
Sbjct: 191 KFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRS------ALAGAVKA 244

Query: 281 VSTGTM----------------------------FTVYYKPRTSPSEFIVPYDQYMESIK 312
              G++                            F V Y PR   S+F+V  +   E++ 
Sbjct: 245 KEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALS 304

Query: 313 NNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
             ++ GMR KM  E E++ +   F GT+      D   WR S WR L+V WDE   +   
Sbjct: 305 VFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQVTWDEPEVLQNV 364

Query: 372 ERVSLWKIEPAL 383
            RVS W++E  +
Sbjct: 365 MRVSPWQVELVM 376


>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
 gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
          Length = 375

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 183/355 (51%), Gaps = 50/355 (14%)

Query: 47  TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINV 106
           + LW ACAG +V +P     V YFPQGH E    +    +D ++P Y     I CRV ++
Sbjct: 18  SRLWQACAGTMVKMPAVDSIVLYFPQGHAEHAGVNVEFRSDVKIPSY-----IPCRVSSI 72

Query: 107 QLKAEPDTDEVFAQVTLLP-------ESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
           +  AE +TDEVFA++ L P       E+ ++E  V+        P     SF KTLT SD
Sbjct: 73  KYMAERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSDNSRKPL----SFAKTLTQSD 128

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
            +  GGFSV +  AD   P LD +  PP Q L+A D+HG  W+FRHI+RG P RHLL +G
Sbjct: 129 ANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIYRGTPERHLLTTG 188

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA--------------------------- 252
           WS FV+ K+LVAGD+ +FLR EN ++ +G+RR                            
Sbjct: 189 WSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWWFPSVGNLTIPRG 248

Query: 253 -----MRQQGNVPS--SVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYD 305
                +R   N  S  S+I+  ++    +  A    + G  F V + P+++  EF V   
Sbjct: 249 GFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYPQSTTPEFFVKAS 308

Query: 306 QYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKV 360
           +   +++  +  GMRFKM FE E+     F GTI  ++  DP +W DS WR L+V
Sbjct: 309 RVKAALQIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWPDSPWRMLQV 363


>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
          Length = 694

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 144/387 (37%), Positives = 202/387 (52%), Gaps = 63/387 (16%)

Query: 72  QGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDE 131
            GH E    + + V  + +P+   P  +LCRV+ ++  A+P++DEVFA++ L+P  + D 
Sbjct: 83  HGHAEN---AYDHVDFKNLPI---PPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDH 136

Query: 132 --------NAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS 183
                   N  E      P       SF KTLT SD +  GGFSV R  A+   P LD +
Sbjct: 137 DYGDGQEGNGFETNSEKTP-------SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYN 189

Query: 184 RQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENG 243
            +PP Q + AKD+HG+ W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +F+R E+G
Sbjct: 190 AEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAESG 249

Query: 244 ELRVGVRRAMRQQ-GNVP---------------SSVI---SSHSMHL------------- 271
           +L VG+RRA R   GN P               SS++    S+S+               
Sbjct: 250 DLCVGIRRAKRGGIGNGPEYSPGWNPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVA 309

Query: 272 --GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEE 329
              V+  A  A++ G  F V Y PR S SEF V       +++  +  GMRFKM FE E+
Sbjct: 310 AESVIEAATLAIN-GRGFEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETED 368

Query: 330 APE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA--LAPP 386
           +     F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E    + P 
Sbjct: 369 SSRISWFMGTVSAVSVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPI 428

Query: 387 ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
            L S   PR K      LP  PD + L
Sbjct: 429 PLTSFSPPRKKM----RLPQHPDYNNL 451


>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 192

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 107/142 (75%), Positives = 118/142 (83%), Gaps = 3/142 (2%)

Query: 42  EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
           E  +YTELW+ CAGPLVTVPR G++VYYFPQGHIEQVEASTNQVA+Q M  YDLP KILC
Sbjct: 36  EDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILC 95

Query: 102 RVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP---PRFHVHSFCKTLTAS 158
            V+NV+LKAEPD DEV+AQ+TLLPES  +EN   +E P  PP    R  VHSFCKTLTAS
Sbjct: 96  EVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTAS 155

Query: 159 DTSTHGGFSVLRRHADECLPPL 180
           DTSTHGGFSVLRRHADECLPPL
Sbjct: 156 DTSTHGGFSVLRRHADECLPPL 177


>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/403 (35%), Positives = 195/403 (48%), Gaps = 60/403 (14%)

Query: 30  STTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           S  + V RV DP+      +W ACAG  V +P    RVYY+PQGH+E    S++ V    
Sbjct: 5   SAIADVHRVIDPK------IWRACAGASVKIPALFSRVYYYPQGHVEHCCPSSSAVT--- 55

Query: 90  MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH-- 147
                  S I C V ++ L A+P TDEVFA +TL P + QD+         PP  RF   
Sbjct: 56  ------ASPIACVVSSIDLLADPITDEVFAHLTLHPAAAQDQFQF------PPQSRFEEE 103

Query: 148 -----VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWR 202
                V +F K LTASD +  GGFSV R  AD   PPLD    PP Q+L   D+HG  W 
Sbjct: 104 DESEKVVTFAKVLTASDANNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWD 163

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA---------- 252
           FRHI+RG PRRHLL +GWS FV+SK+L+ GD+ +F+R    E+ +GVRRA          
Sbjct: 164 FRHIYRGTPRRHLLTTGWSKFVNSKKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSS 223

Query: 253 --------------MRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPS 298
                          ++ G      +    +    ++ A    S G  F V Y P    S
Sbjct: 224 YYGDEYFPGGYYGVKKEDGGEKFRRVGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWS 283

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCL 358
           EF+V  +    S    ++ G R KM  E E++   R T    GI  A  Q      W+ L
Sbjct: 284 EFVVRAEDVEASTNVYWTPGTRVKMAMETEDS--SRIT-WFQGIVSATFQE----TWKQL 336

Query: 359 KVRWDETSTIPRPERVSLWKIEPALAPPA-LNSLPMPRPKRPR 400
           ++ WDE   +   +RV+ W++E   A    L++   P PKR +
Sbjct: 337 QITWDEPEILQNLKRVNPWQVEAVTASSTQLHATYPPPPKRSK 379


>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 149/425 (35%), Positives = 204/425 (48%), Gaps = 50/425 (11%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           LW  CAG  V +P    RVYYFPQGH +Q  ++   ++    P+      +LCRV +VQ 
Sbjct: 20  LWLVCAGTTVEIPTLHSRVYYFPQGHFDQASSAPRNLS----PLLLSKPAVLCRVESVQF 75

Query: 109 KAEPDTDEVFAQVTLLP-----ESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
            A+P TDEVFA++ L P      S     A             +V SF K LTASD +  
Sbjct: 76  LADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTASDANNG 135

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV R  AD   PPL+    PP Q L   D+HG  W FRHI+RG PRRHLL +GWS F
Sbjct: 136 GGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTTGWSTF 195

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRR----AMRQQGNVPSSVISSHSMHL-------- 271
           V++K+LVAGD  +F++   G L VG+RR    +M + G+     I               
Sbjct: 196 VNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEEEEEEEEEE 255

Query: 272 ------------GVLATAWHAVSTGTM-----FTVYYKPRTSPSEFIVPYDQYMESIKNN 314
                       G L+    A +         F V Y P+   SEF+V  +   E++K  
Sbjct: 256 EEVREVFSRDGRGKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVKTEAVNEAMKVA 315

Query: 315 YSIGMRFKMRFEGEEAPEQRFT-GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPER 373
           +S G+R K+  E +++    +  GT+  +      +WR S WR L+V WDE   +   + 
Sbjct: 316 WSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDEPEGLQIAKW 375

Query: 374 VSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSR 433
           VS W++E     PAL+S   P  KR     + ++ DS V T         DP   TGF+ 
Sbjct: 376 VSPWQVELVSTTPALHS-AFPPIKR-----IKAAHDSGVFTNG-----ERDPFPMTGFTN 424

Query: 434 VLQGQ 438
              GQ
Sbjct: 425 STMGQ 429


>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
 gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
          Length = 603

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/388 (35%), Positives = 187/388 (48%), Gaps = 39/388 (10%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKIL-CRVINVQ 107
           +W ACAG  V +P    RVYYFPQGH+EQ   S++ V+   +    L   ++ C++  VQ
Sbjct: 18  IWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPVIPCQISAVQ 77

Query: 108 LKAEPDTDEVFAQVTLLPESN---------QDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
             A+P TDEV+ ++ L P  +            N  +            + +F K LT S
Sbjct: 78  FLADPVTDEVYTKLLLFPIDSFNPSVPVLEHSGNLEQHHGYDYDDDEDKIVAFAKILTPS 137

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           D +  GGFSV R  AD   PPL+   +PP Q L   D+HG  W FRHI+RG PRRHLL +
Sbjct: 138 DANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYRGTPRRHLLTT 197

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ--------------------GN 258
           GWS FV+ K+L+AGD+ +F+R   G++ +GVRRA+R                      G+
Sbjct: 198 GWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCARWREQIACFGGGGGD 257

Query: 259 VPSSVISSHSMHLG-------VLATAWHAVSTGTMFTVYYKPRTS-PSEFIVPYDQYMES 310
           V   V        G        +  A    + G  F V Y PR    S+F+V  D    +
Sbjct: 258 VKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYYPRAGWYSDFVVRTDVVDGA 317

Query: 311 IKNNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIP 369
           +   +S GMR KM  E E++     F GTI      D   WR S WR L+V WDE   + 
Sbjct: 318 LAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPWRMLQVAWDEPEVLQ 377

Query: 370 RPERVSLWKIEPALAPPALNSLPMPRPK 397
             +RVS W++E     P L+    P  K
Sbjct: 378 NAKRVSPWQVEYVSPSPPLHGAFPPAKK 405


>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
          Length = 588

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/371 (34%), Positives = 190/371 (51%), Gaps = 39/371 (10%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           +++ +LW+ACAGP  TVP  G  VYYFPQ                       P  + CRV
Sbjct: 32  SVHPQLWYACAGPTCTVPPVGTAVYYFPQ-------GHAEHAGAAADANLHAPPFVPCRV 84

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQD------------ENAVEKEPPPPPPPRFHVHSF 151
             V+  AE DTDE+F ++ L P  + +            + A +++P  P      V S 
Sbjct: 85  AGVRFMAELDTDEIFVKIRLDPLRSGEPLTDVGEAQVVNDEAGQRQPTRP------VISS 138

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            KTLT SD+ + G  SV R  A+   P LD S + P Q ++A+D+HG EW FRH++RG P
Sbjct: 139 AKTLTKSDSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTP 198

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR--QQGNVPSSVISSHSM 269
            R+LL +GWS FV+SK++V GD+ +FLR E+G + +G+RRA R  ++      ++  ++ 
Sbjct: 199 ERNLLTTGWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRGNAS 258

Query: 270 HLGVLATA-----------WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIG 318
             G  A                 + G  F V + PR +   F V     +E+++ ++  G
Sbjct: 259 GTGAAADGVLRAEDVVAAAVTLAAAGNPFEVVHYPRATAPAFCVRVATVIEALQVSWCPG 318

Query: 319 MRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLW 377
           +RFKM FE ++      F GT+ G+  ADP RW  S WR L+V WDE   +    R+S W
Sbjct: 319 LRFKMAFEAKDLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPW 378

Query: 378 KIEPALAPPAL 388
           ++E     P L
Sbjct: 379 QVELVATMPNL 389


>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
          Length = 241

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/214 (50%), Positives = 141/214 (65%), Gaps = 13/214 (6%)

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA---------VEKEPPPPPPPRFHVH 149
           + CRV++V L+A+   DEV+AQV L+P++ Q E            E+E           H
Sbjct: 30  VFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADTEEEDLEGAGKSTTPH 89

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++C PPLD  +Q P+QEL AKDLHG  W+FRHI+RG
Sbjct: 90  MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGMGWKFRHIYRG 149

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 269
           QPRRHLL +GWS FV+ K+LV+GDA +FLR  +GELR+GVRRA   Q    S+ ++ +S 
Sbjct: 150 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAA--QAKTCSNYLAPYSQ 207

Query: 270 HLGV--LATAWHAVSTGTMFTVYYKPRTSPSEFI 301
            L V  +    +A+S+   F + Y PR S S+FI
Sbjct: 208 LLNVSGIVDVVNAISSRNAFNICYNPRASSSDFI 241


>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
          Length = 624

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/401 (35%), Positives = 184/401 (45%), Gaps = 77/401 (19%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           +W ACAG  V +P    RVYYFPQGH+EQ  AS+  V      V+  PS +LCRV+ V  
Sbjct: 16  IWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLSPL--VFSKPS-VLCRVVAVWF 70

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKE-------PPPPPPPRFHVHSFCKTLTASDTS 161
            A+ DTDEVFA++ L P     E+   +                  V SF K LT+SD +
Sbjct: 71  LADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDAN 130

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
             GGFSV R  AD   PPL+    PP Q L   DL G +W FRHI+RG PRRHLL +GWS
Sbjct: 131 NGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGWS 190

Query: 222 VFVSSKRLVAGDAFIFL-RGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 280
            FV+ K+LVAGD+ +F+ R  N EL +GVRR  R   N       S       LA A  A
Sbjct: 191 KFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRS------ALAGAVKA 244

Query: 281 VSTGTM----------------------------FTVYYKPRTSPSEFIVPYDQYMESIK 312
              G++                            F V Y PR   S+F+V  +   E++ 
Sbjct: 245 KEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALS 304

Query: 313 NNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRDSKWRCL------------- 358
             ++ GMR KM  E E++ +   F GT+      D   WR S WR L             
Sbjct: 305 VFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQTWSYLQDTKMRS 364

Query: 359 ----------------KVRWDETSTIPRPERVSLWKIEPAL 383
                           KV WDE   +    RVS W++E  +
Sbjct: 365 LIVTFFSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVELVM 405


>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 551

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/372 (35%), Positives = 193/372 (51%), Gaps = 28/372 (7%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ++W ACAG  V +P+   RVYYFPQGH+E    S         P+      + C V ++ 
Sbjct: 12  KIWRACAGAAVQIPKLHSRVYYFPQGHMEHASPS-----HYLSPLIRSLPFVPCHVSSLD 66

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH-------VHSFCKTLTASDT 160
             A+P +DEVFA+  L P S   +   + +                 V SF K LT SD 
Sbjct: 67  FLADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPSDA 126

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           +  GGFSV R  AD C PPLD    PP Q L+  D+HG EWRFRHI+RG PRRHL  +GW
Sbjct: 127 NNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHLFTTGW 186

Query: 221 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS---------SVISSHSMHL 271
           S FV+ K+LVAGD  +F++  +G + VG+RRA R    + +         S  ++  +  
Sbjct: 187 SKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRSTTGRVTA 246

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
             +A A  + +    F V Y PRT  ++F+V  +   ES+K  +  GMR K+  E E++ 
Sbjct: 247 EAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKISMETEDSS 306

Query: 332 EQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
               + GT+     ++     +  WR L+V WDE   +   ++VS W++E    P AL++
Sbjct: 307 RMTWYQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKQVSPWQVELVSPPFALHT 361

Query: 391 LPMPRPKRPRSN 402
           +  P  KR R++
Sbjct: 362 VFSPN-KRLRAD 372


>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 572

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/406 (33%), Positives = 187/406 (46%), Gaps = 56/406 (13%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           +W ACAG  V +P    RVYYFPQGH+E      + +     PV        C + ++QL
Sbjct: 20  IWRACAGASVQIPLLYSRVYYFPQGHVEHCCPLISTLPSSTSPV-------PCLITSIQL 72

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF-----------HVHSFCKTLTA 157
            A+P TDEVFA + L P         +++  P    RF            V +F K LT 
Sbjct: 73  LADPITDEVFAHLVLQP-------VTQEQFTPTNYSRFGRYDGDVDDNNKVTTFAKILTP 125

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  AD   PPLD    PP Q+L   D+HG  W FRHI+RG PRRHLL 
Sbjct: 126 SDANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYRGTPRRHLLT 185

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR-------------------------- 251
           +GWS FV+SK+L+AGD+ +F++    E+ +GVRR                          
Sbjct: 186 TGWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYGGDEYNGYYSQSS 245

Query: 252 -AMRQQGNVPSSVISSHSMHLGVLAT--AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYM 308
            A    G+   +   S    L   A   A +  + G  F V Y P    SEF+V  +   
Sbjct: 246 VAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAGWSEFVVRAEDVE 305

Query: 309 ESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTI 368
            S+   ++ G R KM  E E++    +   IV     +   WR S W+ L++ WDE   +
Sbjct: 306 SSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEIL 365

Query: 369 PRPERVSLWKIEPALAPPALNSL--PMPRPKRPRSNMLPSSPDSSV 412
              +RV+ W++E       L++   P  R K P+     S  D  +
Sbjct: 366 QNVKRVNPWQVEIVANATQLHATFPPAKRLKYPQPGGFLSGDDGDI 411


>gi|302806633|gb|ADL70284.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 289

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/300 (43%), Positives = 174/300 (58%), Gaps = 27/300 (9%)

Query: 440 FSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTD 499
           +STLR    E  S E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTD
Sbjct: 1   YSTLRTKHTE--SVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTD 58

Query: 500 LLSGFGANADPSHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMP 554
           LLSGFG N DPSHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ 
Sbjct: 59  LLSGFGTNIDPSHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLH 118

Query: 555 ESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH- 613
           ES  KVP    D + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   + 
Sbjct: 119 ES-PKVPA-ATDASLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNA 173

Query: 614 -----SRELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNL 666
                +RE + K      +E  KS+  +C+LFGIPL +N    +  +S RN +N+ AG  
Sbjct: 174 QAQAQAREQVTKQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT 233

Query: 667 DQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             Q  + +    SD SK SK  +D++   E  +P Q +  H KD  +KT   S+RSCTKV
Sbjct: 234 --QIASPKVQDLSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAHTKT--NSSRSCTKV 286


>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
 gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
 gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
 gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
          Length = 585

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 182/390 (46%), Gaps = 55/390 (14%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           +W ACAG  V +P    RVYYFPQGH+E      + +     PV        C + ++QL
Sbjct: 20  IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPV-------PCIITSIQL 72

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF-----------HVHSFCKTLTA 157
            A+P TDEVFA + L P + Q               RF            V +F K LT 
Sbjct: 73  LADPVTDEVFAHLILQPMTQQQFTPTNYS-------RFGRFDGDVDDNNKVTTFAKILTP 125

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  AD   P L+    PP Q+L   D+HG  W FRHI+RG PRRHLL 
Sbjct: 126 SDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLT 185

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR-------------------------- 251
           +GWS FV+SK+L+AGD+ +F+R    E+ +GVRR                          
Sbjct: 186 TGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSS 245

Query: 252 -AMRQQGNVPSSVISSHSMHLGVLAT--AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYM 308
            A    G+   +   S +  L   A   A +  S G  F V + P    SEF+V  +   
Sbjct: 246 VAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVE 305

Query: 309 ESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTI 368
            S+   ++ G R KM  E E++    +   IV     +   WR S W+ L++ WDE   +
Sbjct: 306 SSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEIL 365

Query: 369 PRPERVSLWKIEPALAPPALNSLPMPRPKR 398
              +RV+ W++E A     L++ P P  KR
Sbjct: 366 QNVKRVNPWQVEIAAHATQLHT-PFPPAKR 394


>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
          Length = 596

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/390 (33%), Positives = 182/390 (46%), Gaps = 55/390 (14%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           +W ACAG  V +P    RVYYFPQGH+E      + +     PV        C + ++QL
Sbjct: 20  IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPV-------PCIITSIQL 72

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF-----------HVHSFCKTLTA 157
            A+P TDEVFA + L P + Q               RF            V +F K LT 
Sbjct: 73  LADPVTDEVFAHLILQPMTQQQFTPTNYS-------RFGRFDGDVDDNNKVTTFAKILTP 125

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
           SD +  GGFSV R  AD   P L+    PP Q+L   D+HG  W FRHI+RG PRRHLL 
Sbjct: 126 SDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLT 185

Query: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR-------------------------- 251
           +GWS FV+SK+L+AGD+ +F+R    E+ +GVRR                          
Sbjct: 186 TGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSS 245

Query: 252 -AMRQQGNVPSSVISSHSMHLGVLAT--AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYM 308
            A    G+   +   S +  L   A   A +  S G  F V + P    SEF+V  +   
Sbjct: 246 VAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVE 305

Query: 309 ESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTI 368
            S+   ++ G R KM  E E++    +   IV     +   WR S W+ L++ WDE   +
Sbjct: 306 SSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEIL 365

Query: 369 PRPERVSLWKIEPALAPPALNSLPMPRPKR 398
              +RV+ W++E A     L++ P P  KR
Sbjct: 366 QNVKRVNPWQVEIAAHATQLHT-PFPPAKR 394


>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 529

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/354 (37%), Positives = 176/354 (49%), Gaps = 31/354 (8%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ++W ACA PL  VP  G +VYYFP GH EQ        A    P         C V  V+
Sbjct: 26  DVWLACATPLSRVPVVGSQVYYFPHGHSEQCPTPPRAPAHNLFP---------CTVAAVR 76

Query: 108 LKAEPDTDEVFAQVTLLPESNQ----DENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           L A+P TDE FA V+L+P  ++    D        P P   R+    + K LT SD +  
Sbjct: 77  LFADPKTDEPFATVSLVPGPHRAPAPDLPHASARRPEPTAFRY----YAKQLTQSDANNG 132

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           GGFSV R  A+   PPLD    PP Q L   D  G  W FRHI+RG PRRHLL +GWS F
Sbjct: 133 GGFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSKF 192

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMR-----QQGNVPSSVISSHSMHLGVLATAW 278
           V++K LVAGDA +F+R  +GEL  G+RRA R     QQG       +   +    +  A 
Sbjct: 193 VNAKLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQEVDDAV 252

Query: 279 HAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF-EGEEAPEQRFTG 337
              + G  FTV Y PR    EF+VP  +  E++   +  G++ +M+F + EE   +   G
Sbjct: 253 RLAAEGAPFTVTYYPRQGAGEFVVPKQEVEEALVGAWRPGVQVRMKFLDAEERRSEWING 312

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
            +  +   DP     + WR L++ W E+        V+ W++E    PP L  L
Sbjct: 313 VVKAV---DP-----NIWRMLEINWAESVAGSLNRYVNAWQVEHVGHPPILKKL 358


>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
          Length = 585

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/387 (34%), Positives = 182/387 (47%), Gaps = 49/387 (12%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           +W ACAG  V +P    RVYYFPQGH+E      + +     PV        C + ++QL
Sbjct: 20  IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPV-------PCIITSIQL 72

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF--------HVHSFCKTLTASDT 160
            A+P TDEVFA + L P + Q               RF         V +F K LT SD 
Sbjct: 73  LADPVTDEVFAHLILQPMTQQQFTPTNYSQFG----RFDGDVDDNNKVTTFAKILTPSDA 128

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           +  GGFSV R  AD   P L+    PP Q+L   D+HG  W FRHI+RG PRRHLL +GW
Sbjct: 129 NNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGW 188

Query: 221 SVFVSSKRLVAGDAFIFLRGENGELRVGVRR---------------------------AM 253
           S FV+SK+L+AGD+ +F+R    E+ +GVRR                           A 
Sbjct: 189 SKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAK 248

Query: 254 RQQGNVPSSVISSHSMHLGVLAT--AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI 311
              G+   +   S +  L   A   A +  S G  F V + P    SEF+V  +    S+
Sbjct: 249 EDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSM 308

Query: 312 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
              ++ G R KM  E E++    +   IV     +   WR S W+ L++ WDE   +   
Sbjct: 309 SMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQNV 368

Query: 372 ERVSLWKIEPALAPPALNSLPMPRPKR 398
           +RV+ W++E A     L++ P P  KR
Sbjct: 369 KRVNPWQVEIAAHATQLHT-PFPPAKR 394


>gi|302806609|gb|ADL70272.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 285

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 126/289 (43%), Positives = 169/289 (58%), Gaps = 25/289 (8%)

Query: 451 ESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DP
Sbjct: 3   ESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDP 62

Query: 511 SHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGG 565
           SHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    
Sbjct: 63  SHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-AT 120

Query: 566 DVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMP 619
           D + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +      +RE + 
Sbjct: 121 DASLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVT 177

Query: 620 KSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQ 677
           K      +E  KS+  +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +   
Sbjct: 178 KQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQD 235

Query: 678 KSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
            SD SK SK  +D++   E  +P Q +  H KD  +KT   S+RSCTKV
Sbjct: 236 LSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAHTKTN--SSRSCTKV 279


>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
 gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
          Length = 521

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 192/388 (49%), Gaps = 41/388 (10%)

Query: 41  PEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD-LPSKI 99
           P   + +++W  CAGP V VP+   +VYYFP GH+E    S N    Q + V D      
Sbjct: 5   PPRRVKSKIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNP---QTITVIDGYGPSF 61

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASD 159
            C +  V L A+P TDEVFA++ L P +   E     +       +F   SF KTLT SD
Sbjct: 62  PCIITAVDLLADPHTDEVFAKLLLSPVTEGQEFPEVVDEEDDGGDKFV--SFVKTLTKSD 119

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           ++  GGFSV R  AD   P LD++   P+Q+L+  D+H   W+F H++RG+P+RHL  +G
Sbjct: 120 SNNGGGFSVPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTTG 179

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-------------QQGNVPSSVISS 266
           W+ FV++K+LVAGD+ +F++   G++ VG+RR ++             ++G      +  
Sbjct: 180 WTPFVNTKKLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVKR 239

Query: 267 HSMHLG---------VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSI 317
                G          +  A         F V Y PR +   F+V  +   +++K  ++ 
Sbjct: 240 EGFSRGGRRGMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVDANVVDDAMKIGWAS 299

Query: 318 GMRFKMRFEGEEAPEQRFT-----GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPE 372
           GMR K+  + +E+   + T     GTI  +            WR L+V WDE   +    
Sbjct: 300 GMRVKLPLKIDESSNSKMTFFQPQGTISNVSSV-------PNWRMLQVNWDELEILQNQN 352

Query: 373 RVSLWKIEPALAPPALNSLPMPRPKRPR 400
           RV+ W++E     PA++ LP    K+PR
Sbjct: 353 RVNPWQVELISHTPAVH-LPFLSTKKPR 379


>gi|302806629|gb|ADL70282.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 279

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/288 (43%), Positives = 169/288 (58%), Gaps = 25/288 (8%)

Query: 451 ESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DP
Sbjct: 4   ESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDP 63

Query: 511 SHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGG 565
           SHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    
Sbjct: 64  SHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-AT 121

Query: 566 DVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMP 619
           D + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +      +RE + 
Sbjct: 122 DASLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVT 178

Query: 620 KSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQ 677
           K      +E  KS+  +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +   
Sbjct: 179 KQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQD 236

Query: 678 KSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
            SD SK SK  +D++   E  +P Q +  H KD ++KT   S+RSCTK
Sbjct: 237 LSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAQTKTN--SSRSCTK 279


>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
          Length = 502

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 184/380 (48%), Gaps = 54/380 (14%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           DP + +  ++W ACA PL  +P  G +VYYFP GH EQ   +              P   
Sbjct: 6   DPPVVVDRDVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAPLPH-------PHLF 58

Query: 100 LCRVINVQLKAEPDTDEVFAQVTLLPESNQD------ENAVEKEPPPPPPPRFHVHSFCK 153
            C V  V L A+P TDE FA ++L+P  ++        +AV+        P F    + K
Sbjct: 59  PCTVAAVALSADPSTDEPFATISLVPGPHRALGGGAPHHAVD--------PAFA--HYAK 108

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
            LT SD +  GGFSV R  AD   P LD    PP Q L  +DL G  W FRHI+RG PRR
Sbjct: 109 QLTQSDANNGGGFSVPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRR 168

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-------------QQGNVP 260
           HLL +GWS FV++K LVAGDA +F+R  +GEL  GVRR  R              +  VP
Sbjct: 169 HLLTTGWSRFVNAKLLVAGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVP 228

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
           +  +            A    + G  FTV Y PR    EF+VP  +  +++ + +  G +
Sbjct: 229 AQEVED----------AARRAAQGAPFTVTYYPRQGAGEFVVPRKEVEDALISPWEPGTQ 278

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPER-VSLWKI 379
            +M+F     PE R +  I G+  A       S WR L++ WDE++      R V+ W++
Sbjct: 279 VRMQF---LHPEDRRSEWINGVVRAVDH----SIWRMLEIDWDESAPPSLKNRHVNAWQV 331

Query: 380 EPALAPPALNSLPMPRPKRP 399
           +    PP L  L +P    P
Sbjct: 332 QLVGCPPLLKRLRIPETIAP 351


>gi|302806627|gb|ADL70281.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 277

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/288 (43%), Positives = 168/288 (58%), Gaps = 25/288 (8%)

Query: 451 ESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADP 510
           ES E D  E SVVW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DP
Sbjct: 2   ESVECDAPENSVVWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDP 61

Query: 511 SHGFSSPFAD-----AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGG 565
           SHG   PF D     ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    
Sbjct: 62  SHGQRIPFYDHSSSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-AT 119

Query: 566 DVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMP 619
           D + Q R NV+Y    +YP+LNG   E++ GNW + P   + +E   +      +RE + 
Sbjct: 120 DASLQGRCNVKY---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVT 176

Query: 620 KSAMVQDQEAGKSK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQ 677
           K      +E  KS+  +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +   
Sbjct: 177 KQPFTIQEETAKSREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQD 234

Query: 678 KSDHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
            SD SK SK  +D++   E  +P Q +  H KD  +KT   S+RSCTK
Sbjct: 235 LSDQSKGSKSTNDHR---EQGRPFQTNNPHPKDAHTKTN--SSRSCTK 277


>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
 gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
          Length = 695

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/409 (32%), Positives = 187/409 (45%), Gaps = 64/409 (15%)

Query: 2   AAAASSSEVSMKSCNETGRIPMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVP 61
           AA A +  +         R+P   + + +           ++ ++  LW ACAG +  VP
Sbjct: 5   AACAPTRRLGTTMLTFAARLPESPEETEARRGAAAEPRGRDVDVHPRLWQACAGSMRAVP 64

Query: 62  REGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQV 121
             G  VYYFPQGH E    +     D ++P +     + CRV  V+L A+PDTD+V+A++
Sbjct: 65  PVGAAVYYFPQGHAEH---AGGAAVDLRVPPF-----VPCRVAAVRLMADPDTDDVYARI 116

Query: 122 TLLP------ESNQDENAVEK-----------------------EPPPPPPPRFHVHSFC 152
            L+P       ++  + A+ K                       +P P         SF 
Sbjct: 117 RLVPLRAWEPVADVGDAALVKTDGSSRGGADGDGDGDAGGGQQQQPRP--------LSFA 168

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GGFSV R  A    P LD S  PP Q ++A+D+HG EW FRHI+R  PR
Sbjct: 169 KTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFVSARDVHGVEWTFRHIYRSTPR 228

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           R LL  G  +  + +        +F R   G    GV  A    G VP+  +        
Sbjct: 229 RTLLNPGCRLRRAKR--------VFCRRGGGGSNAGVAVAGPSDGKVPAEDV-------- 272

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
               A    + G  F V + PR S  EF+V      ES++  +  G+RFKM FE E+   
Sbjct: 273 --VEAARLAAAGQPFEVVHYPRASAPEFVVRAAAVKESMQAPWCPGLRFKMAFETEDLSR 330

Query: 333 -QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
              F GTI G+E ADP RW  S WR L+V WDE   +    RV  W++E
Sbjct: 331 ISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRNVNRVCPWRVE 379


>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
 gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
          Length = 518

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 188/385 (48%), Gaps = 49/385 (12%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV-YDLPSKILCRVINV 106
           ++W ACA PL  +P  G  VYYFP GH EQ  A         +P     P    C V N+
Sbjct: 17  DVWLACAVPLSRLPTVGAEVYYFPHGHAEQCPA--------HLPAPIPAPHLFPCIVTNL 68

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAV---------------EKEPPPPPPPRFHVHSF 151
            L A+  T+EVFA+++L P  +    A                E + PP P P+  +  F
Sbjct: 69  TLGADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPPHPQPQ-ELSYF 127

Query: 152 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP 211
            K LT SD +  GGFSV R  AD   P LD    PP Q L  +D  GN W+FRHI+RG P
Sbjct: 128 TKELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRGTP 187

Query: 212 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH- 270
           RRHLL +GWS FV++K LVAGD  +F+R  NG+L VG+RR  R     P +  ++++   
Sbjct: 188 RRHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFPGADANANANQD 247

Query: 271 --------------LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYS 316
                           V+  A  A + G  FTV Y PR +  EF+VP D+   ++   + 
Sbjct: 248 QQPPPRNARARVPPQDVMEAARLA-AEGRPFTVTYFPRQAAGEFVVPRDEVERALATRWE 306

Query: 317 IGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETS--TIPRPERV 374
            G   +M+    EA + R T       D   +    + WR L++ WD++S  ++     V
Sbjct: 307 PGTEVRMQV--MEAEDTRRT----VWADGHVKALHQNIWRALEIDWDDSSPLSLKLSRFV 360

Query: 375 SLWKIEPALAPPALNSLPMPRPKRP 399
           + W+++    PP  N++ +  P  P
Sbjct: 361 NAWQVQLVAYPPLPNTVRICDPIAP 385


>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 144/434 (33%), Positives = 203/434 (46%), Gaps = 48/434 (11%)

Query: 30  STTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           S T+   R  DP+      +W ACAG  V +P    RVYYFPQGH+E    S+       
Sbjct: 6   SATADFLREVDPQ------IWRACAGASVQIPSLYSRVYYFPQGHVEHSCPSS------L 53

Query: 90  MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQ--------DENAVEKEPPPP 141
           +  +   + + C V  V+L A+P TDEVFA + L P S +           + + +    
Sbjct: 54  ISSFSTAAPVPCVVSAVELLADPITDEVFAHLALQPISPEHFSPSNFSGFGSDDDDDNNS 113

Query: 142 PPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEW 201
              +  V +F K LT SD +  GGFSV R  AD   PPLD    PP Q+L   D+HG  W
Sbjct: 114 NSNKNKVVTFAKILTPSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVW 173

Query: 202 RFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA-MRQQGNVP 260
            FRHI+RG PRRHLL +GWS FV+ K+L+AGD+ +F+R    E+ +GVRRA +   G+  
Sbjct: 174 DFRHIYRGTPRRHLLTTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPISNHGDEY 233

Query: 261 SSVISSHSMHLGVLATAWHAVS-------TGTMFTVYYKPRTSPSEFIVPYDQYMESIKN 313
                     +G+      AVS        G  F V Y P    S+F+V  +     +  
Sbjct: 234 YGGGKKGFRRIGMGKLTAEAVSEAVNKAVQGYPFEVVYYPTAGWSDFVVRAEDVEVFMAG 293

Query: 314 NYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPER 373
            +S G R KM  E E++    +   +V     +   W+      L++ WDE   +   +R
Sbjct: 294 YWSPGTRVKMAMETEDSSRVTWFQGVVSSTFQETGLWKQ-----LQITWDEPEILQNLKR 348

Query: 374 VSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGS------SKLNVDPS- 426
           V+ W++E        NS  +     P   + PSS  S  L+ EG        +  VDPS 
Sbjct: 349 VNPWQVE-----VVANSSHLLAIYPPAKRLKPSSSASGFLSGEGEMLYSGRGQQAVDPSP 403

Query: 427 ---SATGFSRVLQG 437
              S T F   +QG
Sbjct: 404 YLFSYTTFPAGMQG 417


>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
 gi|224030297|gb|ACN34224.1| unknown [Zea mays]
 gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
 gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
 gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
          Length = 513

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/363 (36%), Positives = 179/363 (49%), Gaps = 40/363 (11%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV-YDLPSKILCRVINV 106
           ++W ACA PL  +P  G  VYYFP GH EQ  A         +P     P    C V  V
Sbjct: 21  DVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPA--------HLPAPLPAPHLFPCTVAGV 72

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 166
            L A+ +T+EVFA+++L P  ++   A  +  P    P   +  F K LT SD +  GGF
Sbjct: 73  SLGADDETNEVFAKISLSPGPHRGPAAACRTDPTSDCPPQELSYFTKELTQSDANNGGGF 132

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV R  AD   P LD    PP Q+L  +D  GN W+FRHI+RG PRRHLL +GWS FV++
Sbjct: 133 SVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRRHLLTTGWSRFVNA 192

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV------------- 273
           K LVAGD  +F+R  NG+L VG+RR  R     P   + S +   GV             
Sbjct: 193 KLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPR--VGSGA---GVDPDQPPPRNARAR 247

Query: 274 -----LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
                +  A    + G  F V Y PR +  EFIVP D+    +   +  G + +M+    
Sbjct: 248 VPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWEPGAQVRMQV--M 305

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTI-PRPER-VSLWKIEPALAPP 386
           EA + R T       D   +    + WR L++ WD++S + P   R V+ W++E    PP
Sbjct: 306 EAEDTRRTVW----ADGHVKSLHQNIWRALEIDWDDSSPLSPNLSRFVNAWQVELVTHPP 361

Query: 387 ALN 389
             N
Sbjct: 362 LPN 364


>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
 gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
          Length = 524

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 194/383 (50%), Gaps = 38/383 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTN----QVADQQMPVYDLPSKILCRV 103
           ++W  CAG  V +P+    VYYFP GH+E +  S N       D+  P       ILC V
Sbjct: 11  KIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPNPNTLSHLDRSRPF------ILCTV 64

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQ---DENAVEKEPPPPPPPRFHVHSFCKTLTASDT 160
             V L A+  TDEVF ++ L P +N+   + +++E         +  V S+ KTLT SD 
Sbjct: 65  SAVDLLADLCTDEVFVKLLLTPVTNKGVHEPHSLEVREDKDDDKK--VVSYSKTLTPSDA 122

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           +  G FSV    A    PPLD++ + P QEL+  D+HG  W+FRH++RG P RHLL + W
Sbjct: 123 NNGGAFSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLTTDW 182

Query: 221 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 280
           S FV  KRLV GD+ IF++  +G + VGVRR  +  G   ++ I+  S        A   
Sbjct: 183 SEFVDKKRLVGGDSLIFMKDSDGNISVGVRRQTKFGG---AAKITEKS-----FTEAVEL 234

Query: 281 VSTGTMFTVYYKPRTSP-SEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ--RFTG 337
                 F V Y P       F+V      +++  ++S+G+R ++  +  ++ ++  +F G
Sbjct: 235 ADKNLAFEVVYYPTAKGWCNFVVDAKVVEDAMNISWSLGVRIELSSKNYDSSKRCSKFEG 294

Query: 338 TIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPK 397
           TI  +         +  WR L+V+WDE      PERVS W++E      AL+    P  K
Sbjct: 295 TISALSAP------NCPWRMLEVKWDEPKVSQVPERVSPWEVETISDIFALHPQFHPTKK 348

Query: 398 RPRSNMLPSSPDSSVLT-REGSS 419
             +S+     PDS+  + ++G S
Sbjct: 349 LKKSD-----PDSAAFSDKKGDS 366


>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
 gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
          Length = 185

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 125/180 (69%), Gaps = 7/180 (3%)

Query: 31  TTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM 90
           T  G KRV      L +ELWHACAGPLV++P  G RV YF QGH EQV ASTN+  D ++
Sbjct: 12  TQEGEKRV------LNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARI 65

Query: 91  PVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH 149
           P Y  LP +++C++ NV + A+ +TDEV+AQ+TL P S Q++           P +   +
Sbjct: 66  PNYPSLPPQLICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTN 125

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
            FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRG
Sbjct: 126 YFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185


>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
 gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
          Length = 698

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 130/208 (62%), Gaps = 7/208 (3%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    RVYYFPQGH E  +      A   +P   +P+ +LCRV  V+
Sbjct: 24  QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGH----AHADLPAGRVPALVLCRVDAVR 79

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS 167
             A+PDTDEV A+V L P    + +  +   P     +    SF KTLT SD +  GGFS
Sbjct: 80  FLADPDTDEVLARVRLAPVRPNEPDHADAAAPGAREDK--PASFAKTLTQSDANNGGGFS 137

Query: 168 VLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSK 227
           V R  A+   P LD S  PP Q + AKD+HG  W+FRHI+RG PRRHLL +GWS FV+ K
Sbjct: 138 VPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQK 197

Query: 228 RLVAGDAFIFLR-GENGELRVGVRRAMR 254
           RLVAGD+ +F+R G  G+L VG+RRA +
Sbjct: 198 RLVAGDSIVFMRTGGTGDLCVGIRRAKK 225



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 313 NNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
             +  GMRFKM FE E++     F GT+  ++ ADP RW +S WR L+V WDE   +   
Sbjct: 314 TQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLLQNV 373

Query: 372 ERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           +RVS W +E   + PA++ L    P   +   +P  P+   L
Sbjct: 374 KRVSPWLVELVSSTPAIHHLTPFSPPSRKKLCIPLYPEGHQL 415


>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
 gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
          Length = 622

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 179/353 (50%), Gaps = 46/353 (13%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           ++ +LW ACAG +  VP  G   YYFPQGH EQ  A+ +        +  +P  + CRV 
Sbjct: 32  VHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAAVD--------LRVVPPFVACRVA 83

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            V+L AEPDTD+++A++ L+P                             L   +  T  
Sbjct: 84  AVRLMAEPDTDDIYAKIRLVP-----------------------------LRPWEPVTDV 114

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELA-AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           G ++L   +          R+   + L+ AK L  ++W FRH++RG P RHL+ +GWS F
Sbjct: 115 GDALLGEGSRGGDGDGQQRRRRRPRPLSFAKTLTQSDWTFRHVYRGNPPRHLITAGWSNF 174

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMR-----QQGNVPSSVI--SSHSMHLGVLAT 276
           V +K+L+ GD+ +F+R E+G++ +G+RRA R       G   ++V   S   +    +  
Sbjct: 175 VHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAVAGPSDGKVPAEDVVE 234

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRF 335
           A    + G  F V + PR S  EF V  D   ES+++ +  G+RFKM FE E+      F
Sbjct: 235 AARLAAAGQPFEVVHYPRASAPEFCVRADAVKESMRSPWCPGLRFKMAFETEDLSRISWF 294

Query: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
            GTI G+E ADP RW  S WR L+V WDE   +   +RV  W++E   + P L
Sbjct: 295 MGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVELVSSMPNL 347


>gi|302806631|gb|ADL70283.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 264

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/276 (42%), Positives = 161/276 (58%), Gaps = 25/276 (9%)

Query: 463 VWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-- 520
           VW  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D  
Sbjct: 1   VWQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHS 60

Query: 521 ---AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRY 577
              ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y
Sbjct: 61  SSPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY 118

Query: 578 GGFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGK 631
               +YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  K
Sbjct: 119 ---SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAK 175

Query: 632 SK--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLAD 689
           S+  +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +
Sbjct: 176 SREGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTN 233

Query: 690 DNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
           D++   E  +P Q +  H KD  +KT   S+RSCTK
Sbjct: 234 DHR---EQGRPFQTNNPHPKDAHTKTN--SSRSCTK 264


>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
 gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
          Length = 550

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 173/377 (45%), Gaps = 58/377 (15%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           LW A +G    +   G  VYYF QGH+EQ       V      V   P    C V     
Sbjct: 6   LWRAFSGNSAHIHTVGSEVYYFVQGHLEQA----TYVPTLSRSVLSNP-ITKCIVSAADY 60

Query: 109 KAEPDTDEVFAQVTLLP--------------ESNQDENAVEKEPPPPPPPRFHVHSFCKT 154
            A+P +DEV  ++ L P               S  D N            R  +  F K 
Sbjct: 61  TADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNG----------QRNRIEKFAKV 110

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LT+SD +  GGFSV R  AD   PPL+   +PP Q LA  D+HG  W FRHI+RG PRRH
Sbjct: 111 LTSSDANNGGGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRH 170

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG-- 272
           LL +GWS FV++K+L+AGDA IF R  + ++ VG+RR+ +  G    S  +S     G  
Sbjct: 171 LLTTGWSKFVNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRC 230

Query: 273 --------------------------VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQ 306
                                      +ATA    +    F V Y PR   SEF++P ++
Sbjct: 231 NVEEKRSGDRSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEK 290

Query: 307 YMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDET 365
              S+   +  G+R KM  E E++ + Q + GT+          W+ S WR L+V W+ET
Sbjct: 291 VNNSLNYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEET 350

Query: 366 STIPRPERVSLWKIEPA 382
             +   + VS W++E A
Sbjct: 351 DALQSAKFVSPWEVELA 367


>gi|302806625|gb|ADL70280.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|302806635|gb|ADL70285.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 263

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/275 (42%), Positives = 161/275 (58%), Gaps = 25/275 (9%)

Query: 464 WPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD--- 520
           W  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D   
Sbjct: 1   WQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSS 60

Query: 521 --AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYG 578
             ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y 
Sbjct: 61  SPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY- 117

Query: 579 GFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKS 632
              +YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  KS
Sbjct: 118 --SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKS 175

Query: 633 K--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADD 690
           +  +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D
Sbjct: 176 REGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTND 233

Query: 691 NQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
           ++   E  +P Q +  H KD ++KT   S+RSCTK
Sbjct: 234 HR---EQGRPFQTNNPHPKDAQTKTN--SSRSCTK 263


>gi|302806621|gb|ADL70278.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|302806623|gb|ADL70279.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 263

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/275 (42%), Positives = 160/275 (58%), Gaps = 25/275 (9%)

Query: 464 WPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD--- 520
           W  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D   
Sbjct: 1   WQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQGIPFYDHSS 60

Query: 521 --AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYG 578
             ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y 
Sbjct: 61  SPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY- 117

Query: 579 GFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKS 632
              +YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  KS
Sbjct: 118 --SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKS 175

Query: 633 K--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADD 690
           +  +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D
Sbjct: 176 REGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTND 233

Query: 691 NQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
           ++   E  +P Q +  H KD  +KT   S+RSCTK
Sbjct: 234 HR---EQGRPFQTNNPHPKDAHTKTN--SSRSCTK 263


>gi|302806603|gb|ADL70269.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 263

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/275 (42%), Positives = 160/275 (58%), Gaps = 25/275 (9%)

Query: 464 WPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD--- 520
           W  S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D   
Sbjct: 1   WQSSADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSS 60

Query: 521 --AVPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYG 578
             ++P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y 
Sbjct: 61  SPSMPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY- 117

Query: 579 GFGDYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKS 632
              +YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  KS
Sbjct: 118 --SEYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKS 175

Query: 633 K--DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADD 690
           +  +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D
Sbjct: 176 REGNCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTND 233

Query: 691 NQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
           ++   E  +P Q +  H KD  +KT   S+RSCTK
Sbjct: 234 HR---EQGRPFQTNNPHPKDAHTKTN--SSRSCTK 263


>gi|302806619|gb|ADL70277.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 273

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/273 (42%), Positives = 160/273 (58%), Gaps = 25/273 (9%)

Query: 467 SLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----A 521
           S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D     +
Sbjct: 3   SADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSSSPS 62

Query: 522 VPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFG 581
           +P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y    
Sbjct: 63  MPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY---S 117

Query: 582 DYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKSK-- 633
           +YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  KS+  
Sbjct: 118 EYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKSREG 177

Query: 634 DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQV 693
           +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D++ 
Sbjct: 178 NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTNDHR- 234

Query: 694 FNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
             E  +P Q +  H KD  +KT   S+RSCTKV
Sbjct: 235 --EQGRPFQTNNPHPKDAHTKTN--SSRSCTKV 263


>gi|302806615|gb|ADL70275.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|302806617|gb|ADL70276.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 262

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/272 (42%), Positives = 160/272 (58%), Gaps = 25/272 (9%)

Query: 467 SLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----A 521
           S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D     +
Sbjct: 3   SADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSSSPS 62

Query: 522 VPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFG 581
           +P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y    
Sbjct: 63  MPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY---S 117

Query: 582 DYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKSK-- 633
           +YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  KS+  
Sbjct: 118 EYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKSREG 177

Query: 634 DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQV 693
           +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D++ 
Sbjct: 178 NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTNDHR- 234

Query: 694 FNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
             E  +P Q +  H KD ++KT   S+RSCTK
Sbjct: 235 --EQGRPFQTNNPHPKDAQTKTN--SSRSCTK 262


>gi|302806613|gb|ADL70274.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 262

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/272 (42%), Positives = 159/272 (58%), Gaps = 25/272 (9%)

Query: 467 SLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----A 521
           S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D     +
Sbjct: 3   SADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSSSPS 62

Query: 522 VPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFG 581
           +P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y    
Sbjct: 63  MPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY---S 117

Query: 582 DYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKSK-- 633
           +YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  KS+  
Sbjct: 118 EYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKSREG 177

Query: 634 DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQV 693
           +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D++ 
Sbjct: 178 NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTNDHR- 234

Query: 694 FNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
             E  +P Q +  H KD  +KT   S+RSCTK
Sbjct: 235 --EQGRPFQTNNPHPKDAHTKTN--SSRSCTK 262


>gi|302806611|gb|ADL70273.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 261

 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/272 (42%), Positives = 159/272 (58%), Gaps = 25/272 (9%)

Query: 467 SLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----A 521
           S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D     +
Sbjct: 2   SADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSSSPS 61

Query: 522 VPVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFG 581
           +P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y    
Sbjct: 62  MPAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY---S 116

Query: 582 DYPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKSK-- 633
           +YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  KS+  
Sbjct: 117 EYPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKSREG 176

Query: 634 DCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQV 693
           +C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D++ 
Sbjct: 177 NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTNDHR- 233

Query: 694 FNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
             E  +P Q +  H KD  +KT   S+RSCTK
Sbjct: 234 --EQGRPFQTNNPHPKDAHTKTN--SSRSCTK 261


>gi|302806605|gb|ADL70270.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 261

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/271 (42%), Positives = 158/271 (58%), Gaps = 24/271 (8%)

Query: 467 SLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD----AV 522
           S DD+K+DVVS SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D    + 
Sbjct: 3   SADDDKVDVVSGSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSSSSS 62

Query: 523 PVRKSVLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGD 582
           P ++ + D EGKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y    +
Sbjct: 63  PAKRILSDSEGKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY---SE 117

Query: 583 YPMLNGNRVEHSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKSK--D 634
           YP+LNG   E++ GNW + P   + +E   +      +RE + K      +E  KS+  +
Sbjct: 118 YPVLNGLSTENAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKSREGN 177

Query: 635 CKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVF 694
           C+LFGIPL +N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D++  
Sbjct: 178 CRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTNDHR-- 233

Query: 695 NEHEKPSQPSQTHTKDVRSKTQCGSTRSCTK 725
            E  +P Q +  H KD  +KT   S+RSCTK
Sbjct: 234 -EQGRPFQTNNPHPKDAHTKTN--SSRSCTK 261


>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
          Length = 652

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 177/388 (45%), Gaps = 62/388 (15%)

Query: 58  VTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEV 117
           V +P    RVYYFPQGH+E      + +     PV        C + ++QL A+P TDEV
Sbjct: 26  VQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPV-------PCIITSIQLLADPVTDEV 78

Query: 118 FAQVTLLPESNQDENAVEKEPPPPPPPRF-----------HVHSFCKTLTASDTSTHGGF 166
           FA + L P + Q          P    RF            V +F K LT SD +  GGF
Sbjct: 79  FAHLILQPMTQQQFT-------PTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNGGGF 131

Query: 167 SVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 226
           SV R  AD   P L+    PP Q+L   D+HG  W FRHI+RG PRRHLL +GWS FV+S
Sbjct: 132 SVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVNS 191

Query: 227 KRLVAGDAFIFLRGENGELRVGVRR---------------------------AMRQQGNV 259
           K+L+AGD+ +F+R    E+ +GVRR                           A    G+ 
Sbjct: 192 KKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDDGSP 251

Query: 260 PSSVISSHSMHLGVLAT--AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSI 317
             +   S +  L   A   A +  S G  F V + P    SEF+V  +    S+   ++ 
Sbjct: 252 KKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTP 311

Query: 318 GMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKV-------RWDETSTIPR 370
           G R KM  E E++    +   IV     +   WR S W+ L+V        WDE   +  
Sbjct: 312 GTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITWDEPEILQN 371

Query: 371 PERVSLWKIEPALAPPALNSLPMPRPKR 398
            +RV+ W++E A     L++ P P  KR
Sbjct: 372 VKRVNPWQVEIAAHATQLHT-PFPPAKR 398


>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
          Length = 497

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 103/137 (75%), Gaps = 1/137 (0%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQM-PVYDLPSKILCRV 103
           LY ELW  CAGPLV VP+  ERVYYFPQGH+EQ+EAST QV    M P++ LP KILC V
Sbjct: 44  LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 103

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTH 163
           +NV L+AE DTDEV+AQ+TL+P   + +  +  +P PP   R  VHSF K LTASDTSTH
Sbjct: 104 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTH 163

Query: 164 GGFSVLRRHADECLPPL 180
           GGFSVLR+HA ECLPPL
Sbjct: 164 GGFSVLRKHATECLPPL 180


>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
 gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
          Length = 525

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 171/359 (47%), Gaps = 39/359 (10%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD-LPSK---ILCRVI 104
           +W ACA PL  +P  G +V YFP+GH EQ  A          P+ D LPS     LC + 
Sbjct: 28  VWLACAAPLSRIPVVGTQVSYFPEGHAEQCPA----------PLPDPLPSAHRFFLCTIT 77

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
            V L A+  T E +A ++LLP  +                      + K LT SD +  G
Sbjct: 78  AVDLSADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEFRYYAKQLTQSDANNGG 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
           GFSV R  AD   P L++   PP Q L   DL G+ W FRHI+RG PRRHLL +GWS FV
Sbjct: 138 GFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKFV 197

Query: 225 SSKRLVAGDAFIFLR----GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 280
           ++K+LVAGD  +F+         +L VGVRRA R  G   S+  +   +    +  A   
Sbjct: 198 NAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARGRVQPQEVMEAVRL 255

Query: 281 VSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR----FT 336
            +    F V Y PR    EF+VP  +  + +   +  GM  ++R +  EA + R      
Sbjct: 256 AAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGM--QVRAQVMEAEDTRRLAWLN 313

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDET--STIPRPERVSLWKIEPALAPPALNSLPM 393
           GT+  +            WR L+V WD +  S+  +   V+ W+++P   PP    LPM
Sbjct: 314 GTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVDFPP----LPM 361


>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 545

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 183/369 (49%), Gaps = 28/369 (7%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ++W ACAG  V +P+   RVYYFPQGH+E    S         P+      + C V ++ 
Sbjct: 12  KIWRACAGAAVQIPKLHSRVYYFPQGHLEHASPS-----HYLNPLLRSLPFVPCHVSSLD 66

Query: 108 LKAEPDTDEVFAQVTLLPESNQD--ENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGG 165
             A+P +DEVFA+  L P S Q    +  E            V SF K LT SD +  GG
Sbjct: 67  FLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDRENGVVSFSKILTPSDANNGGG 126

Query: 166 FSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVS 225
           FSV R  AD   PPLD     P+  +A           RHI+RG PRRHL  +GWS FV+
Sbjct: 127 FSVPRYCADSWFPPLDFXXXXPSSPVATSR---RRVALRHIYRGTPRRHLFTTGWSKFVN 183

Query: 226 SKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS-----------SVISSHSMHLGVL 274
            K+LVAGD  +F++  +G + VG+RRA R    + +           S  ++  +    +
Sbjct: 184 HKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSATGRVTAEAV 243

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           A A  + +    F V Y PRT  ++F+V  +   ES+K  +  GMR K+  E E++    
Sbjct: 244 AAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKIAMETEDSSRMT 303

Query: 335 -FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
            F GT+     ++     +  WR L+V WDE   +   +RVS W++E    P AL+++  
Sbjct: 304 WFQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKRVSPWQVELVSLPFALHTVYS 358

Query: 394 PRPKRPRSN 402
           P  KR RS+
Sbjct: 359 PN-KRLRSD 366


>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
 gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
          Length = 216

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 123/216 (56%), Gaps = 10/216 (4%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQL 108
           +W ACAG  V +P    RVYYFPQGH+EQ  +ST         +      I C++  V  
Sbjct: 1   IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPLISCQISAVDF 60

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH----------SFCKTLTAS 158
            A+P TDEVF ++ LLP +N   N       P       V+          +F K LT S
Sbjct: 61  LADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVNDVDDDENKILAFAKILTPS 120

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQS 218
           D +  GGFSV R  AD   PPL+   +PP Q L   D+HG  W FRHI+RG PRRHLL +
Sbjct: 121 DANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTPRRHLLTT 180

Query: 219 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
           GWS FV++K+L+AGD+ +F+R   GE+ +GVRRA+R
Sbjct: 181 GWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216


>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
          Length = 155

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/146 (61%), Positives = 110/146 (75%), Gaps = 5/146 (3%)

Query: 26  QNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQV 85
           QNSN +  G   V D   ALY E W ACAGPLV V + GERVY FPQGH+EQ+EASTNQ 
Sbjct: 13  QNSNFSGQG-NGVKD---ALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQLEASTNQE 68

Query: 86  ADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPR 145
            +Q++P+++LP KILCRV N+QL AE DTDEV+AQ+TL+PE++Q E  +  +  P  PP+
Sbjct: 69  LNQRIPMFNLPPKILCRVFNIQLLAEQDTDEVYAQITLMPEADQTE-PISPDSCPEEPPK 127

Query: 146 FHVHSFCKTLTASDTSTHGGFSVLRR 171
             VHSFCK LTASDTSTHG FSVLR+
Sbjct: 128 PDVHSFCKVLTASDTSTHGEFSVLRK 153


>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
 gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
 gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 529

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 172/363 (47%), Gaps = 43/363 (11%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD-LPSK---ILCRVI 104
           +W ACA PL  +P  G +V YFP+GH EQ  A          P+ D LPS     LC + 
Sbjct: 28  VWLACAAPLSRIPVVGTQVSYFPEGHAEQCPA----------PLPDPLPSAHRFFLCTIT 77

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF----HVHSFCKTLTASDT 160
            V L A+  T E +A ++LLP  +          P               + K LT SD 
Sbjct: 78  AVDLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDA 137

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           +  GGFSV R  AD   P L++   PP Q L   DL G+ W FRHI+RG PRRHLL +GW
Sbjct: 138 NNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGW 197

Query: 221 SVFVSSKRLVAGDAFIFLR----GENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
           S FV++K+LVAGD  +F+         +L VGVRRA R  G   S+  +   +    +  
Sbjct: 198 SKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARGRVQPQEVME 255

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR-- 334
           A    +    F V Y PR    EF+VP  +  + +   +  GM  ++R +  EA + R  
Sbjct: 256 AVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGM--QVRAQVMEAEDTRRL 313

Query: 335 --FTGTIVGIEDADPQRWRDSKWRCLKVRWDET--STIPRPERVSLWKIEPALAPPALNS 390
               GT+  +            WR L+V WD +  S+  +   V+ W+++P   PP    
Sbjct: 314 AWLNGTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVDFPP---- 362

Query: 391 LPM 393
           LPM
Sbjct: 363 LPM 365


>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
 gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
          Length = 456

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 181/378 (47%), Gaps = 18/378 (4%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           E+WH CA   V +P+   RVYYFPQGH+E    S++ +      +       LC V  V 
Sbjct: 13  EIWHTCATAAVKIPKLHSRVYYFPQGHLENASPSSSSITHTHSFLQSFRPFTLCIVSAVD 72

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS 167
           L A+P TDEVF ++ L P +N       KE       R  V SF KTLT SD +    F 
Sbjct: 73  LLADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSDVNNARSFH 132

Query: 168 VLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ-SGWSVFVSS 226
           + R  AD   P LD+  +  +Q L   D+HG   +F H+ RG P+R++L  S W+ FV  
Sbjct: 133 IPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYISEWNSFVKR 192

Query: 227 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTM 286
           K+LVAGD+ IF++   G++ VG+RR    Q    ++      +   V+     A      
Sbjct: 193 KKLVAGDSVIFMKDSTGKIFVGIRR--NTQFVAAAAEQKKDELEKAVMEALKLAEENKAF 250

Query: 287 FTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDAD 346
             VYY       +F+V  +   ES+K  ++  MR KM+   +++    + GTI  +    
Sbjct: 251 EIVYYPQGDDWCDFVVDGNVVDESMKIQWNPRMRVKMK--TDKSSRIPYQGTISIVSRT- 307

Query: 347 PQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPS 406
                 + WR L+V WDE      P RV+ W +E     PA    P P+ K+ R     +
Sbjct: 308 -----SNLWRMLQVNWDEFQVSQIPRRVNPWWVELISHKPA--PTPFPQTKKFR-----T 355

Query: 407 SPDSSVLTREGSSKLNVD 424
           +  S+ L+ +  + LN D
Sbjct: 356 TQSSAQLSDKKETLLNGD 373


>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
 gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
          Length = 215

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/222 (41%), Positives = 122/222 (54%), Gaps = 24/222 (10%)

Query: 50  WHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLK 109
           W ACAG  V +P    RVYYFPQGH EQ  +ST         +      I C++  V   
Sbjct: 1   WRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAPHPPFLTNLALSKPSIPCQISAVDFL 60

Query: 110 AEPDTDEVFAQVTLLPESN-----------------QDENAVEKEPPPPPPPRFHVHSFC 152
           A+P TDEVF ++ L+P  N                 +  N V+ +          + +F 
Sbjct: 61  ADPVTDEVFTRLLLIPLDNPFSNLPLSFLEPCRSEGEGANDVDDD-------ERKILAFS 113

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           K LT SD +  GGFSV R  AD   PPL+   +PP Q L   D+HG  W FRHI+RG PR
Sbjct: 114 KILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPR 173

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
           RHLL +GWS FV++K+L+AGD+ +F+R   GE+ +GVRRA+R
Sbjct: 174 RHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215


>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
 gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
          Length = 460

 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 177/361 (49%), Gaps = 25/361 (6%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           E+W   AGP   +P+   +V+YFP GH+E    S N  A   +  Y     I C V +V 
Sbjct: 12  EIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLINSYR--PIIPCVVSDVD 69

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHS-----FC-KTLTASDTS 161
           L A+  TDEVFA++ L P +N   +      P  P  R + H      F  KTLT SD +
Sbjct: 70  LLADLQTDEVFAKLILTPITNDSVHE-----PQEPEVRENEHGGDRLVFSGKTLTQSDAN 124

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
             G FSV    A    PPLD++   P+Q L  KD+H   W FRH +RG P+RHL+ + WS
Sbjct: 125 NGGAFSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLITTKWS 184

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            FV +K+++ GD+ + ++    + +  +   +R+     ++ I+  S    V+  A  A 
Sbjct: 185 KFVDTKKIIGGDSLVLMKISKDKDKDKIFIGIRRHKLSAAAKITEKS----VMEAAELAD 240

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR--FTGTI 339
              T   +YY   +    F+V  +   ++++ N+  GMR K   + +E+ ++   F GT+
Sbjct: 241 KNMTFEVIYYPTASHWCNFVVDAEAVKKAMQINWQSGMRVKHCLKTDESSKRSSIFQGTV 300

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
             + D          WR L+V WDE+     P +VS W+IE     PAL  L  P  K+ 
Sbjct: 301 SALSDPSHH-----PWRMLQVNWDESEVSQNPSQVSPWQIELISHTPAL-PLQFPPQKKL 354

Query: 400 R 400
           R
Sbjct: 355 R 355


>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
 gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
          Length = 410

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 164/329 (49%), Gaps = 26/329 (7%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKIL-CRVINV 106
           ++W  CAG  V +P+    VYYFP GH+E V  S N      + + D   + + C V  V
Sbjct: 12  KIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPSPNP---STLSLLDRSRQFIPCTVSTV 68

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH----VHSFCKTLTASDTST 162
            L A+P TDEVF ++ L P +N   N V  EPPP      H    V S  KTLT SD + 
Sbjct: 69  NLLADPVTDEVFVKLLLTPGTN---NCVH-EPPPEVREDQHDGVKVVSSGKTLTPSDANN 124

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
            G FSV    A    PPLD+  + P+Q+L+  D+HG EW+ RH++RG P RHL+ + WS 
Sbjct: 125 GGAFSVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPLRHLITTNWSE 184

Query: 223 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVS 282
           FV  K+L+ GD+ +F++         +   + +Q    ++ I+  S     +  A     
Sbjct: 185 FVDEKKLIGGDSLVFMKKSTRTGTETISVGIHRQKFGAATKIAEKS-----VTEAVELAE 239

Query: 283 TGTMFTVYYKPRTSP-SEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ--RFTGTI 339
               F V Y P      +F+V      +++KN ++ G+R K   + + + ++   F GTI
Sbjct: 240 KNMAFDVVYYPTAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLKKDNSSKRCSNFEGTI 299

Query: 340 VGIEDADPQRWRDSKWRCLKVRWDETSTI 368
             +  + P R     WR L+VR  + S +
Sbjct: 300 SAL--SAPNR----PWRMLEVRTAKDSAL 322


>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 126/226 (55%), Gaps = 4/226 (1%)

Query: 186 PPTQE-LAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 244
           P T E + AKD+HG  W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR ENG+
Sbjct: 70  PETDETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGD 129

Query: 245 LRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPY 304
           L VG+RRA R        +     +    +  A    + G  F V Y PR S  EF V  
Sbjct: 130 LCVGIRRAKRGIAGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKA 189

Query: 305 DQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWD 363
                +++  +  GMRFKM FE E++     F GTI  ++ ADP RW +S WR L+V WD
Sbjct: 190 SGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWD 249

Query: 364 ETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPD 409
           E   +   +RVS W +E     P ++  P   P++     +P  PD
Sbjct: 250 EPDLLQNVKRVSPWLVELVSNMPIIHLSPFSPPRKKLR--IPQHPD 293



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 5/77 (6%)

Query: 40  DPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI 99
           + E +L ++LWHACAG +V +P    +V+YFPQGH E    + +  A  +     +P+ +
Sbjct: 3   ETEKSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPR-----IPALV 57

Query: 100 LCRVINVQLKAEPDTDE 116
           LCRV  V+  A+P+TDE
Sbjct: 58  LCRVAAVKFMADPETDE 74


>gi|302806607|gb|ADL70271.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|302806637|gb|ADL70286.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 249

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/261 (41%), Positives = 149/261 (57%), Gaps = 25/261 (9%)

Query: 478 ASRRYGSENWVPPGRHEPVYTDLLSGFGANADPSHGFSSPFAD-----AVPVRKSVLDQE 532
            SRRYGSENW+   RHEP YTDLLSGFG N DPSHG   PF D     ++P ++ + D E
Sbjct: 1   GSRRYGSENWMSSARHEPTYTDLLSGFGTNIDPSHGQRIPFYDHSSSPSMPAKRILSDSE 60

Query: 533 GKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVE 592
           GKF+ +A  W ++ SG SLK+ ES  KVP    D + Q R NV+Y    +YP+LNG   E
Sbjct: 61  GKFDYLANQWQMIHSGLSLKLHES-PKVPA-ATDASLQGRCNVKY---SEYPVLNGLSTE 115

Query: 593 HSHGNWLMPPLPPSNFENSAH------SRELMPKSAMVQDQEAGKSK--DCKLFGIPLFS 644
           ++ GNW + P   + +E   +      +RE + K      +E  KS+  +C+LFGIPL +
Sbjct: 116 NAGGNWPIRPRALNYYEEVVNAQAQAQAREQVTKQPFTIQEETAKSREGNCRLFGIPLTN 175

Query: 645 NHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPS 704
           N    +  +S RN +N+ AG    Q  + +    SD SK SK  +D++   E  +P Q +
Sbjct: 176 NMNGTDSTMSQRNNLNDAAGLT--QIASPKVQDLSDQSKGSKSTNDHR---EQGRPFQTN 230

Query: 705 QTHTKDVRSKTQCGSTRSCTK 725
             H KD  +KT   S+RSCTK
Sbjct: 231 NPHPKDAHTKTN--SSRSCTK 249


>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 476

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 125/206 (60%), Gaps = 6/206 (2%)

Query: 239 RGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPS 298
           RG++GELR+GVRRA++ +       + S   +LG LA   HAVST +MF ++Y PR S S
Sbjct: 12  RGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQS 71

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCL 358
           EFIVPY ++ +SI   +S+G RFKMR+E E+A E+R+TG I G  DADP RWR SKW+CL
Sbjct: 72  EFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADP-RWRGSKWKCL 130

Query: 359 KVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGS 418
            VRWD+     RP R+S W+IE   A    + L  P  KR +  +  ++P+ +V    G 
Sbjct: 131 LVRWDDDGEFRRPNRLSPWEIELTSAASG-SHLAAPTSKRMKPYLPHANPEYTVPYGGGR 189

Query: 419 SKLNVDPSSATGFSRVLQGQEFSTLR 444
                D + +    +VLQGQE    R
Sbjct: 190 P----DFAESAQLRKVLQGQELLGYR 211


>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
 gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
 gi|224031343|gb|ACN34747.1| unknown [Zea mays]
 gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
 gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
          Length = 462

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 167/374 (44%), Gaps = 55/374 (14%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPV-YDLPSKILCRVINV 106
           ++W ACA PL  +P  G+ VYYFP GH EQ  A         +P     P    C V ++
Sbjct: 21  DVWLACAAPLSRLPTVGDDVYYFPDGHAEQCPA--------HLPAPLPAPHFFPCTVTDI 72

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPP---PPRFHVHSFCKTLTASDTSTH 163
            L A+  TDEVFA+++L P       A    P P     PPR  +    K L+ SD +  
Sbjct: 73  SLGADDKTDEVFAKISLRPGL-----AAASRPDPGSSNSPPREPLSYSIKELSQSDANGG 127

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           G F V R   D   P +D    PP Q L   D  G +W FRH++R +  RH+L +GWS F
Sbjct: 128 GSFCVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHVLTTGWSKF 187

Query: 224 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG-----------------------NVP 260
           V++K LVAGD  +F+R  NG+L VG+RR  R  G                       N  
Sbjct: 188 VNAKLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQPPPPPPRNAL 247

Query: 261 SSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
           + V     M    LA      + G  FTV Y PR +  EF+VP ++    +   +  G  
Sbjct: 248 ARVPPKDVMEAARLA------AEGRPFTVTYYPRKAAGEFVVPRNEVEGVLDTLWEPGSH 301

Query: 321 FKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPER---VSLW 377
             M+F   EA + R T    G   A  Q+     WR L++ WD  S+    +    V+ W
Sbjct: 302 VLMQF--AEAEDTRRTMWADGHVKAIHQK----IWRALEIDWDVASSAISAQLGRFVNAW 355

Query: 378 KIEPALAPPALNSL 391
           +++    P     L
Sbjct: 356 QVQRIAYPSICGGL 369


>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
          Length = 631

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/172 (50%), Positives = 116/172 (67%), Gaps = 3/172 (1%)

Query: 237 FLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTS 296
            +R +N +L +G+RRA R Q  +PSSV+SS SMH+G+LA A HA ST + FT++Y PR S
Sbjct: 5   LVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRAS 64

Query: 297 PSEFIVPYDQYMESIKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKW 355
           PSEF++P  +Y++++ +   S+GMRF+M FE EE+  +R+ GTI GI D D  RW +S W
Sbjct: 65  PSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHW 124

Query: 356 RCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP-RPKRPRSNMLPS 406
           R +KV WDE++   R  RVSLW+IEP    P   S P P R KRP    LPS
Sbjct: 125 RSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTS-PFPLRLKRPWPTGLPS 175


>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
          Length = 207

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/203 (43%), Positives = 121/203 (59%), Gaps = 11/203 (5%)

Query: 57  LVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDE 116
           +V +P    +V+YFPQGH E      N  A  +     +PS I CRV +++  A  +TDE
Sbjct: 1   MVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSK-----IPSFIPCRVEDIRYMANHETDE 55

Query: 117 VFAQVTLLPES-NQ---DENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRH 172
           V+A++ L+P + NQ   D + V          +    SF KTLT SD +  GGFS  R  
Sbjct: 56  VYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQ--SFAKTLTQSDANNGGGFSCPRYC 113

Query: 173 ADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAG 232
           A+   P +D S  PP Q +  KD+HG +W FRH++RG P+RHLL +GWS FVS K+L +G
Sbjct: 114 AEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASG 173

Query: 233 DAFIFLRGENGELRVGVRRAMRQ 255
           D+ +FLR ENGELRVG+ R  R+
Sbjct: 174 DSVVFLRSENGELRVGIWREKRR 196


>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
          Length = 273

 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/194 (47%), Positives = 109/194 (56%), Gaps = 42/194 (21%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
            L +ELWHACAGPLV++P  G RV YFPQGH EQ                          
Sbjct: 20  CLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQ-------------------------- 53

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENA----VEKEPPPPPPPRFHVHSFCKTLTASD 159
                 A+ +TDEV+AQ+TL P + Q++      VE   P   P  +    FCKTLTASD
Sbjct: 54  ------ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNY----FCKTLTASD 103

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           TSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH  EW+FRHIFRG  R   L+  
Sbjct: 104 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RDSYLEQS 161

Query: 220 WSVFVSSKRLVAGD 233
           W V   S R V  D
Sbjct: 162 WPVITLSGRRVGRD 175


>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
          Length = 630

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 126/248 (50%), Gaps = 41/248 (16%)

Query: 191 LAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVR 250
           + AKD+HG  W+FRHI+RG PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+R
Sbjct: 98  VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIR 157

Query: 251 RAMRQQGNVPSSV---------------ISSHSMHL------------------------ 271
           RA +     P  +                   SM L                        
Sbjct: 158 RAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPE 217

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAP 331
            V+  A  AVS G  F V Y PR S  EF V       +++  +  GMRFKM FE E++ 
Sbjct: 218 EVVEAANLAVS-GQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSS 276

Query: 332 EQR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNS 390
               F GT+  ++ ADP RW +S WR L+V WDE   +   +RVS W +E     PA++ 
Sbjct: 277 RISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHL 336

Query: 391 LPMPRPKR 398
            P   P++
Sbjct: 337 APFSPPRK 344



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 4/78 (5%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    +VYYFPQGH E  +         + P   +P+ +LCRV  V+
Sbjct: 23  QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGH----GPVEFPGGRVPALVLCRVAGVR 78

Query: 108 LKAEPDTDEVFAQVTLLP 125
             A+PDTDEVFA++ L+P
Sbjct: 79  FMADPDTDEVFAKIRLVP 96


>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
 gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
          Length = 377

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 161/344 (46%), Gaps = 31/344 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ++W  C GP V +P+   +VYYFP+GH+E   +S        +  Y   S I C V +V 
Sbjct: 12  KIWQICVGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYR--SSIPCIVSSVD 69

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP------RFHVHSFCKTLTASDTS 161
           L  +P TDEVFA++ L P ++Q       EPPPP  P        ++ S+ KTLT SD +
Sbjct: 70  LFVDPHTDEVFAKLLLTPVTDQ-------EPPPPVVPGQEDDDGDNLVSYVKTLTQSDCT 122

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
                 V    ++   P LD+ +   +Q +   DL   EWR+ + +    R H   +GW 
Sbjct: 123 R--VLCVPIECSNLIFPKLDLDK---SQSITVTDLKNQEWRYTYTYSNSSRLH---TGWL 174

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            FV  K+LVA D+ +F++   G++ VG+RR  +   +  +    + +  + VL  A  A 
Sbjct: 175 NFVREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTDEIKVLDAAELAE 234

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT----- 336
                  VYY   +   +F+V      +++K  +  GMR K+  +  E+   + T     
Sbjct: 235 KNTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLK 294

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           GTI  + +          WR L+V WD       P  V+ W++E
Sbjct: 295 GTISFVFNHSSNV---PNWRILEVNWDGLDIPQIPNLVNPWQVE 335


>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
          Length = 627

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 161/367 (43%), Gaps = 46/367 (12%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    +VYYFPQGH E  +         + P   +P+ +LCRV  V+
Sbjct: 23  QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGH----GPVEFPGGRVPALVLCRVAGVR 78

Query: 108 LKAEPDTDEVFAQVTLLPESNQDEN---------------AVEKEPPPPPPPRFHVHSFC 152
             A+PDTDEVFA++ L+P    ++                A ++E P          SF 
Sbjct: 79  FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPA---------SFA 129

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTLT SD +  GG  V ++        L              DL     R +    G P 
Sbjct: 130 KTLTQSDANNGGGTFVNQKK-------LVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPE 182

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
                        +     G   +FLRG++     G + A   +G V + V     +   
Sbjct: 183 FLPPPPPPPPPTPAAGGNYGGFSMFLRGDDD----GNKMAAAARGKVRARVRPEEVVEAA 238

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
            LA       +G  F V Y PR S  EF V       +++  +  GMRFKM FE E++  
Sbjct: 239 NLAV------SGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSR 292

Query: 333 QR-FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL 391
              F GT+  ++ ADP RW +S WR L+V WDE   +   +RVS W +E     PA++  
Sbjct: 293 ISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLA 352

Query: 392 PMPRPKR 398
           P   P++
Sbjct: 353 PFSPPRK 359


>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
          Length = 366

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 112/219 (51%), Gaps = 19/219 (8%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           GD +  +  ++W ACA P   VP  G  VYYFP GH EQ        A  + P       
Sbjct: 12  GDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQ-HLLAPLPASHRFPC------ 64

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP------RFHVHSFC 152
             C V +V L AE  TDEVFA+++L P       A    P P P P      R  +  F 
Sbjct: 65  -TCTVTDVSLGAEDRTDEVFAKISLRPGP-----AAASRPEPGPGPGSSNSTRQGLSYFV 118

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
             L   DTST G F + R   +   P LD++  PP Q+L  +D  G  W+F HI+  + R
Sbjct: 119 NELLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVKIR 178

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 251
           +H L +GWS FV +K LVAGD  +F+R  NG+L +G+RR
Sbjct: 179 QHRLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRR 217


>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
 gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
          Length = 377

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 159/344 (46%), Gaps = 31/344 (9%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ++W  CAGP V +P+   +VYYFP+GH+E   +S        +  Y   S I C V +V 
Sbjct: 12  KIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYR--SSIPCIVSSVD 69

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP------RFHVHSFCKTLTASDTS 161
           L  +P TDEVFA++ L P ++Q       EPPPP  P        ++ S+ KTLT SD +
Sbjct: 70  LFVDPHTDEVFAKLLLTPVTDQ-------EPPPPVVPGQEDDDGDNLVSYVKTLTQSDCT 122

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
                 V    ++   P LD+ +   +Q +   DL   E  + + +    R H   +GW 
Sbjct: 123 R--VLCVPIECSNLIFPKLDLDK---SQSITVTDLKNQERGYTYTYSNSSRLH---TGWL 174

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            FV  K+LVA D+ +F++   G++ VG+RR  +   +       + +  + VL  A  A 
Sbjct: 175 NFVREKKLVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVLDAAELAE 234

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT----- 336
                  VYY   +   +F+V      +++K  +  GMR K+  +  E+   + T     
Sbjct: 235 KNTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLK 294

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           GTI  + +          WR L+V WD       P  V+ W++E
Sbjct: 295 GTISFVYNHSSNV---PNWRMLEVNWDGLDIPQNPNLVNPWQVE 335


>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
 gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
          Length = 239

 Score =  142 bits (358), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 76/197 (38%), Positives = 113/197 (57%), Gaps = 11/197 (5%)

Query: 47  TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINV 106
           T++W  C G  V +P+   +VYYFPQGH++ V   T         ++  P  I C +  V
Sbjct: 37  TKIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHTIITL-----LHCYPPSISCIISAV 91

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPR----FHVHSFCKTLTASDTST 162
            L  +P TDEVFA++ L P    D +  E+E PP  P      ++V SF K LT SD ++
Sbjct: 92  DLLVDPHTDEVFAKLLLTPV--MDGHGHEQEAPPEVPAEDDDGYNVVSFVKILTQSDCNS 149

Query: 163 HGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 222
             GF V     D  LP L +    P+Q+L+  D+ G  W++ HI+RG+ +RHL   GW+ 
Sbjct: 150 GCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRGKSKRHLFSRGWTS 209

Query: 223 FVSSKRLVAGDAFIFLR 239
           FV++K+LVAGD+F+F++
Sbjct: 210 FVNNKKLVAGDSFVFIK 226


>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 155/374 (41%), Gaps = 113/374 (30%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +LWHACAG +V +P    RV YFPQGH E    +     D   P   +P  +LCRV  V+
Sbjct: 18  QLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNV----DFGNP--RIPPLVLCRVSAVK 71

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFS 167
             A+P++D                     E P  P       SF KTLT SD + +GG  
Sbjct: 72  YLADPESD---------------------EAPEKPA------SFAKTLTQSD-ANNGG-- 101

Query: 168 VLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSK 227
                                                              GWS FV+ K
Sbjct: 102 ---------------------------------------------------GWSNFVNKK 110

Query: 228 RLVAGDAFIFLRGENGELRVGVRRA-------------MRQQGNVPSSVISSHS------ 268
            LVAGD+ +FLR ENG+L VG+RRA             +R+  N P   I +HS      
Sbjct: 111 NLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPEGYSGFLREDENRP---ILTHSNAGFRG 167

Query: 269 ---MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
              +    +A A    + G  F + Y PR S  EF V       +++  +  GM+FKM F
Sbjct: 168 KGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVRAAMQIQWCPGMKFKMAF 227

Query: 326 EGEEAPE-QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
           E +++     F G I  +   DP RW +S WR L+V WDE   +   +RV+ W +E    
Sbjct: 228 ETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLVELVSH 287

Query: 385 PPALNSLPMPRPKR 398
            P+++  P   P++
Sbjct: 288 VPSIHLSPFSPPRK 301


>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
 gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
          Length = 523

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 168/373 (45%), Gaps = 52/373 (13%)

Query: 47  TELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINV 106
           +++W   AGP V +P+ G +VYYF +GH+E   +S N   + ++ +   P  +LC + +V
Sbjct: 11  SKIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSSPN--IETELLLCLRPPSVLCIISSV 68

Query: 107 QLKAEPDTDEVFAQVTLLP--------------------ESNQDENAV--EKEPPPPPPP 144
            L A   TDEVFA++ L P                    E N   N V   +EP PP  P
Sbjct: 69  DLLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPAPPEVP 128

Query: 145 ------RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHG 198
                   ++ S+ K LT SD  T  G  V R   +   P LD+     +++L+  D+  
Sbjct: 129 DEEDDDSNNLVSYVKILTQSD--TQSGLFVPRECMELIFPNLDLEDPMQSEKLSVTDIQD 186

Query: 199 NEWRFRHIFRGQP-RRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV-RRAM--- 253
             W +++ +  +    +   +GWS FV  K+LVA D+ +F++   G++ VG+ R+AM   
Sbjct: 187 VVWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGICRKAMYPA 246

Query: 254 -RQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIK 312
             ++G        S ++    +  A         F V Y P  +  +F+V      E++K
Sbjct: 247 TEEEGG------KSENLTEKAVKDAVELAGKNMAFQVVYYPTANWCDFVVDASVVDEAMK 300

Query: 313 NNYSIGMRFKMRFEGEEAPEQRFT-----GTIVGIEDADPQRWRDSKWRCLKVRWDETST 367
           N +  GM  K+R     +   + T     GTI  + +          WR L+V WD    
Sbjct: 301 NGWEFGMGIKLRLNEFASSNSKKTYYQPKGTISNMSNVPSNV---PSWRMLQVNWDGPDI 357

Query: 368 IPRPERVSLWKIE 380
              P RV+ W+++
Sbjct: 358 SQNPNRVNPWQVD 370


>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
          Length = 152

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/117 (54%), Positives = 85/117 (72%), Gaps = 2/117 (1%)

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG
Sbjct: 11  SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 70

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 266
            PRRHLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA R  G + S+ ++S
Sbjct: 71  TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGLAS 125


>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
          Length = 273

 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 113/222 (50%), Gaps = 22/222 (9%)

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF K LTASD +    FSVL   A    P LD S   P Q +  +D+HG EW F HI+RG
Sbjct: 56  SFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEWMFCHIWRG 115

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR----QQGNVPSSVIS 265
            P+RHLL +GW+ FV++K+L  GD+ +F+R E+ ++ VG+RR  R     QGN      +
Sbjct: 116 SPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQGNGGGPAGA 175

Query: 266 SHSMHLGVLAT-----AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMR 320
                 G ++T     A      G  F V Y P  + SEF V      ES+         
Sbjct: 176 VVGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVAAVKESM--------- 226

Query: 321 FKMRFEGEEAPEQR---FTGTIVGIEDADPQRWRDSKWRCLK 359
            +M FE EE+   +   F GTI  +E  DP  W +S WR LK
Sbjct: 227 -QMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267


>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
          Length = 135

 Score =  135 bits (340), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 61/105 (58%), Positives = 78/105 (74%)

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG
Sbjct: 2   SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
            PRRHLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA R
Sbjct: 62  TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  135 bits (340), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 61/105 (58%), Positives = 78/105 (74%)

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG
Sbjct: 2   SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
            PRRHLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA R
Sbjct: 62  TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 138

 Score =  135 bits (340), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 61/105 (58%), Positives = 78/105 (74%)

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG
Sbjct: 2   SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
            PRRHLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA R
Sbjct: 62  TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  135 bits (340), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 61/105 (58%), Positives = 78/105 (74%)

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG
Sbjct: 2   SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
            PRRHLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA R
Sbjct: 62  TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
 gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
 gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  135 bits (340), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 61/105 (58%), Positives = 78/105 (74%)

Query: 150 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRG 209
           SF KTLT SD +  GGFSV R  A+   P LD + +PP Q + AKD+HG  W+FRHI+RG
Sbjct: 2   SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
            PRRHLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA R
Sbjct: 62  TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
 gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
 gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
 gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
          Length = 323

 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 32/310 (10%)

Query: 45  LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
           ++ ++W  C G  V +P+   RVYYFPQGH+E   +S++      + +       +C + 
Sbjct: 17  VHPQIWQTCTGAAVQIPKLHSRVYYFPQGHLEHASSSSSNAYIHSLDLQRFRPFTICIIS 76

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH-------VHSFCKTLTA 157
            V L A+P TDEVFA++ L P +N   N+  ++P   P            + SF + L  
Sbjct: 77  AVDLLADPHTDEVFAKLLLTPVTN---NSCVQDPHEVPNCSNDDDVCDEVIDSFTRILAL 133

Query: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL- 216
           ++ S H  F + R  A+   PPL M     +Q L   D+HG  W+F H+  G  +R++  
Sbjct: 134 TNVSKH-AFYIPRFCAENMFPPLGME---VSQHLLVTDVHGEVWKFHHVCHGFAKRNVFY 189

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR---AMRQQGNVPSSVISSHSMHLGV 273
            S W+ FV  K+L  GDA +F++   G+L VG+RR   A +++  +  +V+ +  +    
Sbjct: 190 TSEWASFVERKKLDVGDAVVFMKNSTGKLFVGIRRKDAAEQKKDELEKAVMEAVKL---- 245

Query: 274 LATAWHAVSTGTMFTVYYKPRTSP-SEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
                        F + Y PR     +F+V  +   ES+K  ++  MR KM+   +++  
Sbjct: 246 -------AEENKPFEIVYYPRGDDWCDFVVDGNIVDESMKIQWNPRMRVKMK--TDKSSR 296

Query: 333 QRFTGTIVGI 342
             + GTI  +
Sbjct: 297 IPYQGTITTV 306


>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
 gi|223949733|gb|ACN28950.1| unknown [Zea mays]
 gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
          Length = 446

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 175/393 (44%), Gaps = 33/393 (8%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ++W ACA P   +P  G+ VYYFP GHIEQ +     ++   +P  D   +  C V +V 
Sbjct: 21  DVWLACAAPFSRIPTVGDEVYYFPDGHIEQHQ----HLSAAPLPAQD---RFHCTVTDVS 73

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAV------EKEPPPPPPPRFHVHSFCKTLTASDTS 161
           L  +  TDEVFA+++L P   +              P P P P   +  F K L+ +D  
Sbjct: 74  LGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPAPGPPQKLRYFTKDLSQTDVY 133

Query: 162 THGGFSVLRRHADECLPPLDMS----RQPPTQELAAKDLHGNEWRFRHIFRGQP-RRHLL 216
                 +   H    +P ++      ++   Q++  +D  G  WRF   +R  P + H L
Sbjct: 134 AKFRIPLENEHV-LPIPKVETDGADQQRVQRQDVVMRDTRGKSWRFSETYRVNPSKEHSL 192

Query: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276
            +GW  F  +KRL AGD  +F+R  NG+L VGVRR      +VP             +  
Sbjct: 193 GTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRL-----HVPRYRPFDFQGPAQDVME 247

Query: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT 336
           A    + G  FTV Y PR +  EFIVP  +  +++  ++  G   +M    +E   ++ T
Sbjct: 248 AVRLAAAGRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGAVVRMEVMEDE--NRQHT 305

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRP 396
             + G  +A     R + WR L++ W     +     V+ W++  +L P A     + R 
Sbjct: 306 VWVHGRVNA----IRQNIWRMLEIIWGVDPPLATTRSVNAWQVA-SLPPLATTGRSVIRS 360

Query: 397 KRPRSNMLPSSPDSSVLTREGSSKLNVDPSSAT 429
           +       PSS  S+  +R   S  +  P SAT
Sbjct: 361 ESESQAQSPSS--STRASRHTDSGPSATPFSAT 391


>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 186

 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/89 (70%), Positives = 72/89 (80%), Gaps = 3/89 (3%)

Query: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPS 97
           VGDP   LY ELWHACA PLVT PR G+ V+YFPQGHIEQVEAS NQVA  QM +YDLP 
Sbjct: 14  VGDP---LYDELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPP 70

Query: 98  KILCRVINVQLKAEPDTDEVFAQVTLLPE 126
           K+LCRVIN++LKAE D D+V+AQV L+ E
Sbjct: 71  KLLCRVINIELKAEADIDKVYAQVILMLE 99


>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
          Length = 187

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%)

Query: 113 DTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRH 172
           +TDEV+AQ+TL P S Q++           P +   + FCKTL ASDTSTHGGFSV RR 
Sbjct: 69  ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 128

Query: 173 ADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
           A++  P LD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +G+ + 
Sbjct: 129 AEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGYLLL 179


>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/107 (59%), Positives = 78/107 (72%)

Query: 113 DTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRH 172
           +TDEV+AQ+TL P S Q++           P +   + FCKTL ASDTSTHGGFSV RR 
Sbjct: 96  ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 155

Query: 173 ADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           A++  PPLD S+QPP QEL A+DLH NEW+FRHIFRGQP+RHLL +G
Sbjct: 156 AEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 202


>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
          Length = 728

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 161/339 (47%), Gaps = 40/339 (11%)

Query: 48  ELWHACAGPLVTV-PREGERVYYFPQGHIEQV-EASTNQVADQQMPVYDLPSKILCRVIN 105
           ++WHACA P   V P  G  VYY P GHIEQ  E     ++    P++ +P    C V +
Sbjct: 22  DVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPDPIHPVP----CTVAD 77

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGG 165
           + L  + ++ E +A ++LLP S+ D  A  ++ P    P F    F K L+ +D +++  
Sbjct: 78  LVLDVDAESGEAYATISLLPGSHDDTTA-RRQVPAHGEPGFRF--FEKQLSPADVTSNA- 133

Query: 166 FSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL-------QS 218
             VL   A+  LPPLD++     +    +DL G  + F HI+  +  R++L         
Sbjct: 134 -LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVNDND 192

Query: 219 GWSVFVSSKRLVAGDAFIFLR------GENGELRVGVRRAMRQQ-GNVPSSVISSHSMHL 271
           GW  FV +KRL   D  +F+R        +GEL VGVRRA R + G+ P   +  +    
Sbjct: 193 GWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK--- 249

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYME-SIKNNYSI--GMRFKMRFEGE 328
            V++  W A+   T F V Y PR    EF+V  D+Y+  S    Y    G    +R    
Sbjct: 250 -VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMNPL 308

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETST 367
           +   Q  +GT+   +   P       WR L+V WD+ ++
Sbjct: 309 QI-AQSISGTVRTFDHLRP-------WRMLEVDWDQAAS 339



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 22/205 (10%)

Query: 186 PPTQELAAKDLHGNEWRFRHIFRG--QPRR---HLLQSGWSVFVSSKRLVAGDAFIFLRG 240
           P   +L   +L G  W F H +      RR   H L +GWS FV +KRL  GD  IF+R 
Sbjct: 469 PRIPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRR 528

Query: 241 E-NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSE 299
              GE  VGVRR  +  G +P  +   H      +A AW   S+   F V Y P    +E
Sbjct: 529 RPGGEPLVGVRR--KPHGGMPVGIPDKH------VADAWLDASSAQPFRVTYCPWQGTAE 580

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLK 359
           F+V  ++   S     + G R ++    ++A  +        + D   +    S+WR L+
Sbjct: 581 FVVRREEVEGS--PPLAPGTRVRLLMNPDDARRRSQPPVYGTVRDVHCR----SEWRMLE 634

Query: 360 VRWDETSTIP--RPERVSLWKIEPA 382
           V WD  S +      RV+ W+++P 
Sbjct: 635 VDWDRDSPLAPTMNRRVNSWQVQPV 659


>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
 gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
 gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
          Length = 752

 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 161/339 (47%), Gaps = 40/339 (11%)

Query: 48  ELWHACAGPLVTV-PREGERVYYFPQGHIEQV-EASTNQVADQQMPVYDLPSKILCRVIN 105
           ++WHACA P   V P  G  VYY P GHIEQ  E     ++    P++ +P    C V +
Sbjct: 22  DVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPDPIHPVP----CTVAD 77

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGG 165
           + L  + ++ E +A ++LLP S+ D  A  ++ P    P F    F K L+ +D +++  
Sbjct: 78  LVLDVDAESGEAYATISLLPGSHDDTTA-RRQVPAHGEPGFRF--FEKQLSPADVTSNA- 133

Query: 166 FSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL-------QS 218
             VL   A+  LPPLD++     +    +DL G  + F HI+  +  R++L         
Sbjct: 134 -LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVNDND 192

Query: 219 GWSVFVSSKRLVAGDAFIFLR------GENGELRVGVRRAMRQQ-GNVPSSVISSHSMHL 271
           GW  FV +KRL   D  +F+R        +GEL VGVRRA R + G+ P   +  +    
Sbjct: 193 GWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK--- 249

Query: 272 GVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYME-SIKNNYSI--GMRFKMRFEGE 328
            V++  W A+   T F V Y PR    EF+V  D+Y+  S    Y    G    +R    
Sbjct: 250 -VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMNPL 308

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETST 367
           +   Q  +GT+   +   P       WR L+V WD+ ++
Sbjct: 309 QI-AQSISGTVRTFDHLRP-------WRMLEVDWDQAAS 339



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 22/205 (10%)

Query: 186 PPTQELAAKDLHGNEWRFRHIFRG--QPRR---HLLQSGWSVFVSSKRLVAGDAFIFLRG 240
           P   +L   +L G  W F H +      RR   H L +GWS FV +KRL  GD  IF+R 
Sbjct: 493 PRIPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRR 552

Query: 241 E-NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSE 299
              GE  VGVRR  +  G +P  +   H      +A AW   S+   F V Y P    +E
Sbjct: 553 RPGGEPLVGVRR--KPHGGMPVGIPDKH------VADAWLDASSAQPFRVTYCPWQGTAE 604

Query: 300 FIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLK 359
           F+V  ++   S     + G R ++    ++A  +        + D   +    S+WR L+
Sbjct: 605 FVVRREEVEGS--PPLAPGTRVRLLMNPDDARRRSQPPVYGTVRDVHCR----SEWRMLE 658

Query: 360 VRWDETSTIP--RPERVSLWKIEPA 382
           V WD  S +      RV+ W+++P 
Sbjct: 659 VDWDRDSPLAPTMNRRVNSWQVQPV 683


>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 467

 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 92/134 (68%), Gaps = 5/134 (3%)

Query: 271 LGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
            GVLA+A HA+ T ++F VYY+PR S S++IV  ++Y  + K  +++GMRF+M FE E+ 
Sbjct: 1   FGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDV 60

Query: 331 PEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPR-PERVSLWKIEPA-LAPPAL 388
           P ++F GTIVG  D  PQ W  S+W+ LKV+WD++  I   PERVS W+I+ + ++ PA+
Sbjct: 61  PVKKFFGTIVGDGDFSPQ-WSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAI 119

Query: 389 NSL--PMPRPKRPR 400
           ++L     + KRPR
Sbjct: 120 STLLQSSAKNKRPR 133


>gi|283771376|gb|ADB28924.1| auxin response factor [Zea mays subsp. mays]
          Length = 266

 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 131/252 (51%), Gaps = 20/252 (7%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE S+IPRPERVS W+IEPA++PP +N LP+ RPKRPRSN + S P+SS  T+E + 
Sbjct: 1   VRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPRSNAVASLPESSAPTKEAAP 60

Query: 420 KLNVDPSSATGFSRVLQGQEFSTLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSAS 479
           K+ ++ +      R LQ Q+    +  F   +++E D+A KS + P   D +K   +   
Sbjct: 61  KVTLE-TQQHALQRPLQTQDNVAPKSVFG--DNSELDSAHKSSLRPSGFDLDK-STIGMQ 116

Query: 480 RRYGSENWVPPGRHEPVYTDLLSGF---GANADPSHGFSSPFADAVP---------VRKS 527
           R+ GS+ W+   R +  Y+++LSG+      A  S GF S   D +          V   
Sbjct: 117 RKLGSDIWMRMNRPD-GYSEMLSGYQPPNEGARNSQGFCS-LPDQIAAGRPNFWHTVNAH 174

Query: 528 VLDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLN 587
             DQ+G  NL    WS+MPS     M   +  +  + G ++ Q   N ++G  G Y  L 
Sbjct: 175 YQDQQGNHNLFPGSWSMMPSSTGFGMNRQSYPMIQEVGGMS-QSCTNTKFGN-GVYAALP 232

Query: 588 GNRVEHSHGNWL 599
           G  ++     W 
Sbjct: 233 GRGIDRYPSGWF 244


>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
          Length = 418

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 148/328 (45%), Gaps = 36/328 (10%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ++W ACA P   +P  G+ V YFP GHIEQ  ++    A Q +P      +  C V +V 
Sbjct: 62  DVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSA----APQPLPAQ---HRFHCTVTDVS 114

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF----HVHSFCKTLTASDTSTH 163
           L  +  TDEVFA+++L P   +              P       +  F K L+ +D    
Sbjct: 115 LGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELSQTDVYAR 174

Query: 164 GGFSVLRRHADECLP-PLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP-RRHLLQSGWS 221
               +   H    LP P+  +     Q++  +D  G  WRF   +   P ++H L +GW 
Sbjct: 175 FRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLTTGWL 231

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRR-------AMRQQGNVPSSVISSHSMHLGVL 274
            F  +KRL AGD  +F+R  NG+L VGVRR           QG  P    +   M    L
Sbjct: 232 DFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQP-AQDVMEAVRL 290

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           A A      G  FTV Y PR +  EFIVP  +  +++  ++  G   +M  E  E   ++
Sbjct: 291 AAA------GRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRM--EVMEDENRQ 342

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRW 362
           +T  +VG  +A     R + WR L++ W
Sbjct: 343 YTMWVVGRVEAI----RQNIWRMLEIIW 366


>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
 gi|194689238|gb|ACF78703.1| unknown [Zea mays]
          Length = 430

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 148/328 (45%), Gaps = 36/328 (10%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ++W ACA P   +P  G+ V YFP GHIEQ  ++    A Q +P      +  C V +V 
Sbjct: 62  DVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSA----APQPLPAQ---HRFHCTVTDVS 114

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF----HVHSFCKTLTASDTSTH 163
           L  +  TDEVFA+++L P   +              P       +  F K L+ +D    
Sbjct: 115 LGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELSQTDVYAR 174

Query: 164 GGFSVLRRHADECLP-PLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQP-RRHLLQSGWS 221
               +   H    LP P+  +     Q++  +D  G  WRF   +   P ++H L +GW 
Sbjct: 175 FRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLTTGWL 231

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRR-------AMRQQGNVPSSVISSHSMHLGVL 274
            F  +KRL AGD  +F+R  NG+L VGVRR           QG  P    +   M    L
Sbjct: 232 DFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQP-AQDVMEAVRL 290

Query: 275 ATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR 334
           A A      G  FTV Y PR +  EFIVP  +  +++  ++  G   +M    +E   ++
Sbjct: 291 AAA------GRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRMEVMEDE--NRQ 342

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRW 362
           +T  +VG  +A     R + WR L++ W
Sbjct: 343 YTMWVVGRVEAI----RQNIWRMLEIIW 366


>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
          Length = 722

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 160/346 (46%), Gaps = 47/346 (13%)

Query: 48  ELWHACAGPLVTV-PREGERVYYFPQGHIEQV-EASTNQVADQQMPVYDLPSKILCRVIN 105
           ++WHACA P   V P  G  VYY P GHIEQ  E     ++    P++ +P    C V +
Sbjct: 22  DVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPDPIHPVP----CTVAD 77

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGG 165
           + L  + ++ E +A ++LLP S+ D  A  ++ P    P F    F K L+ +D +++  
Sbjct: 78  LVLDVDAESGEAYATISLLPGSHDDTTA-RRQVPAHGEPGFRF--FEKQLSPADVTSNA- 133

Query: 166 FSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRH-----IFRGQPRRHLL---- 216
             VL   A+  LPPLD++     +    +DL G  + F H     I+  +  R++L    
Sbjct: 134 -LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYMLGDLG 192

Query: 217 ---QSGWSVFVSSKRLVAGDAFIFLR--------GENGELRVGVRRAMRQQ-GNVPSSVI 264
                GW  FV +KRL   D  +F+R          +GEL VGVRRA R + G+ P   +
Sbjct: 193 VNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHPRPGV 252

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYME-SIKNNYSI--GMRF 321
             +     V++  W  +   T F V Y PR    EF+V  D+Y+  S    Y    G   
Sbjct: 253 EDNK----VVSEVWLEMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTV 308

Query: 322 KMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETST 367
            +R    +   Q  +GT+   +   P       WR L+V WD+ ++
Sbjct: 309 HLRMNPLQI-AQSISGTVRTFDHLRP-------WRMLEVDWDQAAS 346



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 37/206 (17%)

Query: 186 PPTQELAAKDLHGNEWRFRHIFRG--QPRR---HLLQSGWSVFVSSKRLVAGDAFIFLRG 240
           P   +L   +L G  W F H +      RR   H L +GWS FV +KRL  GD  IF+R 
Sbjct: 476 PRIPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRR 535

Query: 241 E-NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAW-HAVSTGTMFTVYYKPRTSPS 298
              GE  VGVRR  +  G +   +   H      +A AW  AV T              +
Sbjct: 536 RPGGEPIVGVRR--KPHGGMLVGIPDKH------VADAWLDAVGT--------------A 573

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCL 358
           EF+V  ++   S     + G R ++    ++   +        + D   +    SKWR L
Sbjct: 574 EFVVRREEVEGS--PPLAPGTRVRLLMNPDDVRRRSQPPVYGTVRDVHSR----SKWRML 627

Query: 359 KVRWDETSTIP--RPERVSLWKIEPA 382
           +V WD  S +      RV+ W+++P 
Sbjct: 628 EVDWDRDSPLAPTMNRRVNSWQVQPV 653


>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
          Length = 496

 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 239 RGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPS 298
           R E  +L +G+R A R Q  +PS V+SS SMH+ +LA   HA +T + FT+++ PR SP+
Sbjct: 21  RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 80

Query: 299 EFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRC 357
           EF++P  +Y+++I     S+GMRF+M FE EE+  +R+ GTI  + DADP RW  S WR 
Sbjct: 81  EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 140

Query: 358 LKV 360
           +KV
Sbjct: 141 VKV 143



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 239 RGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPS 298
           R E  +L +G+R A R Q  +PS V+SS SMH+ +LA   HA +T + FT+++ PR SP+
Sbjct: 225 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 284

Query: 299 EFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRC 357
           EF++P  +Y+++I     S+GMRF+M FE EE+  +R+ GTI  + DADP RW  S WR 
Sbjct: 285 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 344

Query: 358 LK 359
           +K
Sbjct: 345 VK 346


>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 83/137 (60%), Gaps = 15/137 (10%)

Query: 82  TNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLP---ESN----QDENA 133
           T +  + ++P Y  LPS++LC+V N+ + A+ DTDEV+AQ+ L P   E+N    Q   +
Sbjct: 39  TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETNVFPIQSLGS 98

Query: 134 VEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAA 193
             K   P          FCK LTASD STHGGFS+ RR A +  P LD S QPP QEL  
Sbjct: 99  YAKSKHP-------AEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIV 151

Query: 194 KDLHGNEWRFRHIFRGQ 210
           +DLH N W FRHI+RG+
Sbjct: 152 QDLHDNMWIFRHIYRGR 168


>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 1/130 (0%)

Query: 82  TNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP 140
           T +  + ++P Y  LPS++LC+V N+ + A+ DTDEV+AQ+ L P +++ +    +    
Sbjct: 39  TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETDVFPIQSLGS 98

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
               +     FCK LTASD STHGGFS+ RR A +  P LD S QPP QEL  +DLH N 
Sbjct: 99  YAKSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDNM 158

Query: 201 WRFRHIFRGQ 210
           W FRHI+RG+
Sbjct: 159 WIFRHIYRGR 168


>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 119

 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 56/66 (84%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           FCKTL ASDTSTHGGFSV RR A++  P LD S+QPP QEL A+DLH NEW+FRHIFRGQ
Sbjct: 31  FCKTLIASDTSTHGGFSVPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 90

Query: 211 PRRHLL 216
           P+RHLL
Sbjct: 91  PKRHLL 96


>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
          Length = 139

 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/119 (51%), Positives = 81/119 (68%), Gaps = 2/119 (1%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D  +P Y  LP +++C+
Sbjct: 21  CLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQ 80

Query: 103 VINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPP-PPPPRFHVHSFCKTLTASDT 160
           + N+ + A+ +TDEV+AQ+TL P S Q++  V   P     P +   + FCKTLTASDT
Sbjct: 81  LHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGIPSKQPTNYFCKTLTASDT 139


>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
          Length = 796

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 155/352 (44%), Gaps = 72/352 (20%)

Query: 43  MALYTELWHACAGPLV-TVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI-L 100
            ++  E+W ACA P    +P  G  VYYFP GH +Q  +          P   LP ++ L
Sbjct: 402 FSITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQCPSR---------PPEPLPGRVFL 452

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP-----RFHVHSFCKTL 155
           C+V  V+L A    +E+FA ++L+P +   + A++ + P  P P     +  + SF K L
Sbjct: 453 CKVTAVRLDAT--RNELFATMSLIPVAR--DQAIQPQAPADPGPSSPQVKTTLVSFVKPL 508

Query: 156 TASD-TSTHGGFSVLRRHADE-CLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
           T +D       F V +R A    LP L ++   P   L  KD+HG EW   + ++     
Sbjct: 509 TCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--T 563

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRG-ENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 272
           H+L SGW  F ++ RLV GD  +F+R  ++GE  +G+RR ++ +   P SV         
Sbjct: 564 HMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPE---PVSVDE------- 613

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
           V+   W A      F V Y  R    EF+VP                           P 
Sbjct: 614 VIEAVWRAARLEP-FEVAYLSRQDGDEFVVPL--------------------------PN 646

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
               G ++ IE+     +  S WR ++V W   + + R   V+ W+I   L 
Sbjct: 647 VGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNR--YVNFWQIREVLG 691



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 137/337 (40%), Gaps = 46/337 (13%)

Query: 49  LWHACAGPLV-TVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +W ACA P    +P  G  V+YF  GH EQ       + +Q       P   LC V  V+
Sbjct: 20  MWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQL--AVPGPRVFLCTVAAVR 77

Query: 108 LKAEPDTDEVFAQVTLLPESNQD---ENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           L+A+  T+E +A +TL P ++ D                 +  +  F KTL +SD     
Sbjct: 78  LRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAEYRD 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
            F+V    A +  PPL  ++    Q L  KDL G+   F +   G   R  L   W  F 
Sbjct: 138 RFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWKKFR 193

Query: 225 SSKRLVAGDAFIFL-RGENGELRVGVRRA------MRQQGNVPSSVISSHSMHLGVLATA 277
                V GD+ IF+ R ++ EL VGVRR       +R + + P + +    + +  +  A
Sbjct: 194 DDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPL---PVAVQEVIAA 250

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT- 336
               + G  FT  Y+ R    EF+VP +   E        G+R + RF  E   E  +  
Sbjct: 251 AGRAAAGEQFTATYRSRQDGDEFVVPREVVEE--------GLRLRSRFTPEMEVEFVWAL 302

Query: 337 -----------GTIVGIEDADPQRWRDSKWRCLKVRW 362
                      G I  I D     W    WR +++ W
Sbjct: 303 EDGAPPSVGPHGKITAIHDTT---W---MWRSVEIGW 333


>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
          Length = 881

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 71/110 (64%), Gaps = 2/110 (1%)

Query: 291 YKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQR 349
           Y PRTSPSEF+VP  +Y ++      SIGMRF+M FE EE+  +R+ GTI GI D DP R
Sbjct: 2   YNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPVR 61

Query: 350 WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRP 399
           W +S+WR L+V WDE+    +  RVS+W+IE  +A P     P  R KRP
Sbjct: 62  WPNSQWRNLQVGWDESGAGDKQNRVSIWEIE-TVATPFFICPPFFRLKRP 110


>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
          Length = 429

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 8/184 (4%)

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
           +L+   +++   ++F + + PR   SEFIVPY ++++S+  ++S+G RFK+  E E+A E
Sbjct: 1   MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANE 60

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL-NSL 391
           + F G I+GI + DP  W  SKW+ L ++WD  +      RVS W IE   +  ++ + L
Sbjct: 61  RSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTHRL 119

Query: 392 PMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEF--STLRGNFAE 449
                KR +    PS  D+ +L   G      D      F RVLQGQE   S++ G    
Sbjct: 120 SSSVSKRTKLCFPPSDLDTPILDGNGRP----DSVETERFHRVLQGQELVHSSIHGTACS 175

Query: 450 RESN 453
             S+
Sbjct: 176 HSSD 179


>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
          Length = 541

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 143/305 (46%), Gaps = 34/305 (11%)

Query: 48  ELWHACAGPLVT-VPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI-LCRVIN 105
           ++W ACA P    +P  G  VYYFP GH EQ       ++  Q P   LP +I LC+V +
Sbjct: 256 DMWMACAAPKSGRLPTVGSLVYYFPDGHAEQC------LSRPQEP---LPGRIFLCKVTD 306

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF----HVHSFCKTLTASDTS 161
           V+L A   T+E  A ++L+P +  D++A + + P  P P       + SF K LT +D +
Sbjct: 307 VRLGAAA-TNEALATISLVPIA-ADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTDVT 364

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
            +         A   LP + ++   P   L  KDL G EW F + ++   R  + ++GW 
Sbjct: 365 KNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRNGWM 419

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            F ++  LV GD  +F+R  NGE+ + VRR   +    P SV         V+   W A 
Sbjct: 420 EFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRP--APFSVEE-------VIEAVWRAA 470

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGM--RFKMRFEGEEAPEQRFTGTI 339
                F V Y  R    EF+VP D   + ++  ++ GM   F    E  + P     G +
Sbjct: 471 RR-EPFEVSYCSRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVEDGKLPTIGPQGEV 529

Query: 340 VGIED 344
           + IE+
Sbjct: 530 ISIEN 534


>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
          Length = 180

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/75 (62%), Positives = 57/75 (76%)

Query: 34  GVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY 93
           G  R G     LY ELW ACAGPLV VP +GERV+YFPQGH+EQ+E STNQ  + Q+P +
Sbjct: 9   GESRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHF 68

Query: 94  DLPSKILCRVINVQL 108
           DLP KILCRV+N++L
Sbjct: 69  DLPPKILCRVVNIRL 83


>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
           Os07g0183300/Os07g0183600
 gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
          Length = 762

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 38/301 (12%)

Query: 95  LPSKI-LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP-----RFHV 148
           LP ++ LC+V  V+L A    +E+FA ++L+P +   + A++ + P  P P     +  +
Sbjct: 384 LPGRVFLCKVTAVRLDAT--RNELFATMSLIPVAR--DQAIQPQAPADPGPSSPQVQTTL 439

Query: 149 HSFCKTLTASDTSTHGGFSVL--RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
            SF K LT +D   +    ++  R  A   LP L ++   P   L  KD+HG EW   + 
Sbjct: 440 VSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYT 496

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG-ENGELRVGVRRAMRQQGNVPSSVIS 265
           ++     H+L SGW  F ++ RLV GD  +F+R  ++GE  +G+RR ++ +   P SV  
Sbjct: 497 WKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPE---PVSVDE 551

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGM--RFKM 323
                  V+   W A      F V Y  R    EF+VP      +++  ++ GM   F  
Sbjct: 552 -------VIEAVWRAARLEP-FEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVW 603

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
             E +  P     G ++ IE+     +  S WR ++V W   + + R   V+ W+I   L
Sbjct: 604 AVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNR--YVNFWQIREVL 656

Query: 384 A 384
            
Sbjct: 657 G 657



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 137/337 (40%), Gaps = 46/337 (13%)

Query: 49  LWHACAGPLV-TVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +W ACA P    +P  G  V+YF  GH EQ       + +Q       P   LC V  V+
Sbjct: 20  MWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQL--AVPGPRVFLCTVAAVR 77

Query: 108 LKAEPDTDEVFAQVTLLPESNQD---ENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
           L+A+  T+E +A +TL P ++ D                 +  +  F KTL +SD     
Sbjct: 78  LRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAEYRD 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
            F+V    A +  PPL  ++    Q L  KDL G+   F +   G   R  L   W  F 
Sbjct: 138 RFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWKKFR 193

Query: 225 SSKRLVAGDAFIFL-RGENGELRVGVRRA------MRQQGNVPSSVISSHSMHLGVLATA 277
                V GD+ IF+ R ++ EL VGVRR       +R + + P + +    + +  +  A
Sbjct: 194 DDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPL---PVAVQEVIAA 250

Query: 278 WHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFT- 336
               + G  FT  Y+ R    EF+VP +   E        G+R + RF  E   E  +  
Sbjct: 251 AGRAAAGEQFTATYRSRQDGDEFVVPREVVEE--------GLRLRSRFTPEMEVEFVWAL 302

Query: 337 -----------GTIVGIEDADPQRWRDSKWRCLKVRW 362
                      G I  I D     W    WR +++ W
Sbjct: 303 EDGAPPSVGPHGKITAIHDTT---W---MWRSVEIGW 333


>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
          Length = 721

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 38/301 (12%)

Query: 95  LPSKI-LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPP-----RFHV 148
           LP ++ LC+V  V+L A    +E+FA ++L+P +   + A++ + P  P P     +  +
Sbjct: 343 LPGRVFLCKVTAVRLDAT--RNELFATMSLIPVAR--DQAIQPQAPADPGPSSPQVQTTL 398

Query: 149 HSFCKTLTASDTSTHGGFSVL--RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHI 206
            SF K LT +D   +    ++  R  A   LP L ++   P   L  KD+HG EW   + 
Sbjct: 399 VSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYT 455

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG-ENGELRVGVRRAMRQQGNVPSSVIS 265
           ++     H+L SGW  F ++ RLV GD  +F+R  ++GE  +G+RR ++ +   P SV  
Sbjct: 456 WKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPE---PVSVDE 510

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGM--RFKM 323
                  V+   W A      F V Y  R    EF+VP      +++  ++ GM   F  
Sbjct: 511 -------VIEAVWRAARLEP-FEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVW 562

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPAL 383
             E +  P     G ++ IE+     +  S WR ++V W   + + R   V+ W+I   L
Sbjct: 563 AVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNR--YVNFWQIREVL 615

Query: 384 A 384
            
Sbjct: 616 G 616



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 114/290 (39%), Gaps = 45/290 (15%)

Query: 96  PSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQD---ENAVEKEPPPPPPPRFHVHSFC 152
           P   LC V  V+L+A+  T+E +A +TL P ++ D                 +  +  F 
Sbjct: 26  PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 85

Query: 153 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPR 212
           KTL +SD      F+V    A +  PPL  ++    Q L  KDL G+   F +   G   
Sbjct: 86  KTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN-- 141

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFL-RGENGELRVGVRRAMRQQGNVPSSVISSHSMHL 271
           R  L   W  F      V GD+ IF+ R ++ EL VGVRR    Q  +   + +  S   
Sbjct: 142 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRR----QRTLDKPLRTRRSRPP 197

Query: 272 GVLATAWHAV-------STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMR 324
             L  A   V       + G  FT  Y+ R    EF+VP +   E        G+R + R
Sbjct: 198 TPLPVAVQEVIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEE--------GLRLRSR 249

Query: 325 FEGEEAPEQRFT------------GTIVGIEDADPQRWRDSKWRCLKVRW 362
           F  E   E  +             G I  I D     W    WR +++ W
Sbjct: 250 FTPEMEVEFVWALEDGAPPSVGPHGKITAIHDTT---W---MWRSVEIGW 293


>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
 gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
          Length = 524

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 146/322 (45%), Gaps = 34/322 (10%)

Query: 31  TTSGVKRVGDPEMALYTELWHACAGPLVT-VPREGERVYYFPQGHIEQVEASTNQVADQQ 89
           TTS   +       +  ++W ACA P    +P  G  VYYFP GH EQ  +         
Sbjct: 222 TTSSSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSR-------- 273

Query: 90  MPVYDLPSKI-LCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH- 147
            P   LP +I LC+V +V+L A   T+E  A ++L+P +  D++A + + P  P P    
Sbjct: 274 -PQEPLPGRIFLCKVTDVRLGAAA-TNEALATISLVPIA-ADDHAFQLQAPADPDPAPAQ 330

Query: 148 ---VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFR 204
              + SF K LT +D + +         A   LP + ++   P   L  KDL G EW F 
Sbjct: 331 SQSLVSFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFN 387

Query: 205 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVI 264
           + ++   R  + ++GW  F ++  LV GD  +F+R  NGE+ + VRR   +    P SV 
Sbjct: 388 YTWKAHTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPA--PFSVE 443

Query: 265 SSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGM--RFK 322
                   V+   W A      F V Y  R    EF+VP D   + ++  ++ GM   F 
Sbjct: 444 E-------VIEAVWRAARR-EPFEVSYCLRQDGDEFVVPRDIVDDGLRARFAPGMAVNFV 495

Query: 323 MRFEGEEAPEQRFTGTIVGIED 344
              E  + P     G ++ IE+
Sbjct: 496 WAVEDGKLPTIGPQGEVISIEN 517


>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
 gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
          Length = 283

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 39/172 (22%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G  + A+   LW  C GPL+T+P  G +V YFPQG+ EQV AST + AD  +P+      
Sbjct: 7   GGDKKAINQALWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQKEADFDIPIS----- 61

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTAS 158
                    L A+ + DEVFAQ+TL P S   +        P   P F + +    ++ S
Sbjct: 62  --------HLHADQENDEVFAQMTLQPFSQTAD--------PFLLPDFGIQTKQTIVSFS 105

Query: 159 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
            T T                  D ++ PP QEL A+DLH  EWRFRHI+RG+
Sbjct: 106 RTLT------------------DFTQTPPAQELVARDLHNIEWRFRHIYRGR 139


>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 109

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 49/58 (84%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           FCKTL ASDTSTHGGFSV RR A++  PPLD S+QPP QEL A+DLH NEW+FRHIFR
Sbjct: 31  FCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFR 88


>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
 gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
          Length = 585

 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 32/289 (11%)

Query: 48  ELWHACAGPLVT-VPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKI-LCRVIN 105
           ++W ACA P    +P  G  VYYFP GH EQ  +          P   LP +I LC+V +
Sbjct: 279 DMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSR---------PQEPLPGRIFLCKVTD 329

Query: 106 VQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFH----VHSFCKTLTASDTS 161
           V+L A   T+E  A ++L+P +  D++A + + P  P P       + SF K LT +D +
Sbjct: 330 VRLGAAA-TNEALATISLVPIA-ADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTDVT 387

Query: 162 THGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 221
            +         A   LP + ++   P   L  KDL G EW F + ++   R  + ++GW 
Sbjct: 388 KNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRNGWM 442

Query: 222 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAV 281
            F ++  LV GD  +F+R  NGE+ + VRR   +    P SV         V+   W A 
Sbjct: 443 EFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPA--PFSVEE-------VIEAVWRAA 493

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEA 330
                F V Y  R    EF+VP D   + ++  ++ GM     +  E+ 
Sbjct: 494 RR-EPFEVSYCLRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVEDG 541


>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
          Length = 377

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 78/132 (59%), Gaps = 24/132 (18%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEW-RFRHIF 207
           H FCKTLTASDTSTHGGFSV RR A++C PPL+                   W RF+   
Sbjct: 121 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRFKECK 162

Query: 208 RGQPRRHLL----QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-QQGNVPSS 262
           R   R +++     +G S FV+ K+LV+ DA +FLRG+NGELR+GVRRA + + G+    
Sbjct: 163 RTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVRRAAQLKNGSAFQL 222

Query: 263 VISSHSMHLGVL 274
            I+S  +  G L
Sbjct: 223 FITSAQIGSGRL 234


>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
 gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
          Length = 170

 Score = 95.5 bits (236), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 7/98 (7%)

Query: 213 RHLLQSGWSVFVSSKRLVAGDAFIFL-------RGENGELRVGVRRAMRQQGNVPSSVIS 265
           RHLL +GWSVFVS+K LVAGD+ +F        R E  +L  G+R A+  Q  +PSSV+S
Sbjct: 58  RHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNRNEKNQLLFGIRHAIWPQTVMPSSVLS 117

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP 303
           + S+HLG+LA   HA +T + FT++Y PR  PSEF++P
Sbjct: 118 TDSLHLGLLAAVAHAAATNSPFTIFYNPRACPSEFVIP 155


>gi|353441048|gb|AEQ94108.1| putative auxin response transcription factor 1 [Elaeis guineensis]
          Length = 58

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/55 (74%), Positives = 52/55 (94%)

Query: 69  YFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTL 123
           YFPQGH+EQ+EASTNQ  DQ MP+++LPSKILCRV++VQL+AEPDTDEV+AQ+T+
Sbjct: 2   YFPQGHMEQLEASTNQGLDQHMPLFNLPSKILCRVVHVQLRAEPDTDEVYAQITI 56


>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 123

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 5/81 (6%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCR 102
            L +ELWHACAGPLV++P  G RV YFPQGH EQV ASTN+  D Q+P Y +LP +++C+
Sbjct: 23  CLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQ 82

Query: 103 VINVQLKAEPDTDEVFAQVTL 123
           + N    A+ +TDEV+AQ+TL
Sbjct: 83  LHN----ADVETDEVYAQMTL 99


>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
 gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
          Length = 354

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 35/274 (12%)

Query: 121 VTLLPESNQDENAVEKEPPPPPPP-----RFHVHSFCKTLTASDTSTHGGFSVL--RRHA 173
           ++L+P +   + A++ + P  P P     +  + SF K LT +D   +    ++  R  A
Sbjct: 1   MSLIPVAR--DQAIQPQAPADPGPSSPQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETA 58

Query: 174 DECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGD 233
              LP L ++   P   L  KD+HG EW   + ++     H+L SGW  F ++ RLV GD
Sbjct: 59  MGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWK--EYTHMLSSGWIKFANANRLVTGD 113

Query: 234 AFIFLRG-ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYK 292
             +F+R  ++GE  +G+RR ++ +   P SV         V+   W A      F V Y 
Sbjct: 114 NVVFMRSMDSGERYMGLRRTLKPE---PVSVDE-------VIEAVWRAARLEP-FEVTYL 162

Query: 293 PRTSPSEFIVPYDQYMESIKNNYSIGM--RFKMRFEGEEAPEQRFTGTIVGIEDADPQRW 350
            R    EF+VP      +++  ++ GM   F    E +  P     G ++ IE+     +
Sbjct: 163 SRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIEN-----Y 217

Query: 351 RDSKWRCLKVRWDETSTIPRPERVSLWKIEPALA 384
             S WR ++V W   + + R   V+ W+I   L 
Sbjct: 218 ATSIWRMIQVEWPSCAGMNR--YVNFWQIREVLG 249


>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 216

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 90/207 (43%), Gaps = 71/207 (34%)

Query: 198 GNEWRFRHIFR-----GQPRRHLLQSGWSVF--VSSKRLVAGDAFIFLRGENGELRVGVR 250
           GN W  + + R      QPR HL+  GWS+   VS K L + D                 
Sbjct: 49  GNFWGVKRVKRVEMTSTQPRWHLITIGWSILTIVSQKNLTSCDV---------------- 92

Query: 251 RAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 310
                                 VL  A HA                  EF++PY++Y+ S
Sbjct: 93  ----------------------VLFLATHA------------------EFVIPYEKYITS 112

Query: 311 IKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIP- 369
           I+N   IG RF MRFE  ++PE R  G + G+ D DP RW +SKW C     D  S +  
Sbjct: 113 IRNPICIGTRFIMRFEMNDSPE-RCAGVVAGVYDLDPYRWPNSKW-C-----DGMSLVSD 165

Query: 370 RPERVSLWKIEPALAPPALNSLPMPRP 396
             ERVSLW+I+P+++ P L+    PRP
Sbjct: 166 HQERVSLWEIDPSVSLPHLSIQSSPRP 192


>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
 gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
          Length = 412

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 5/122 (4%)

Query: 259 VPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSI 317
           +PSSV+S+++M +  L  A    +  T+  V Y P    SEF+VP  +Y  ++  +  SI
Sbjct: 37  LPSSVLSANNMPIDALVVA----ANRTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLSI 92

Query: 318 GMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLW 377
           G+RF M FE +        GTIVGI D DP  W DS+W+ ++V+WD+     +P RV  W
Sbjct: 93  GLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRVCSW 152

Query: 378 KI 379
            I
Sbjct: 153 DI 154


>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
          Length = 533

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 56/92 (60%)

Query: 319 MRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWK 378
           MRF+M FE EE+  +R+ GTI GI D DP RW +S WR +KV WDE++   R  RVSLW+
Sbjct: 1   MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60

Query: 379 IEPALAPPALNSLPMPRPKRPRSNMLPSSPDS 410
           IEP    P   SL   R KRP     PS  DS
Sbjct: 61  IEPLTTFPMYPSLFPLRLKRPWHPGSPSLLDS 92


>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
 gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
 gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
          Length = 407

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 160/405 (39%), Gaps = 62/405 (15%)

Query: 48  ELWHACAGPLV-TVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINV 106
           ++W ACA P    +P  G  V+YF  GH  Q       + +Q       P   LC V  V
Sbjct: 19  DMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQL--AVPGPRVFLCTVAAV 76

Query: 107 QLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF---HVHSFCKTLTASDTSTH 163
           +L+A+  T+E +A++TL P ++ D   +   P P P        +  F KTL  SD    
Sbjct: 77  RLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFVKTLMISDFDFR 136

Query: 164 GGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 223
             FS     A    PPL  ++    Q L  KDLHG+   F +  +G  +R  L   W  F
Sbjct: 137 IRFSAPMADAKGVFPPLVDAKA--VQPLLVKDLHGSPMTFDYGRKG--KRVTLAKVWKKF 192

Query: 224 VSSKRLVAGDAFIFL-----RGENGELRVGVRR----------AMRQQG--NVPSSVISS 266
                 V GD+ IF+       ++GEL VGVRR           MR+      P + +  
Sbjct: 193 RDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRYRPPTPPQAAVQE 252

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFE 326
                     A    + G  FTV Y+ R    EF+VP +   E ++   +     +  + 
Sbjct: 253 AV------LAAAGHAAAGERFTVAYRSRKDGDEFVVPREAVEEGLRARLTSLAEVEFVWA 306

Query: 327 GEE------APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
            E+       P  + T    G             WR L++ WD  S +      + W++ 
Sbjct: 307 VEDGAPPIVGPRGKVTAIATG-----------QLWRNLEIVWDGNSEMDM--SANFWQVR 353

Query: 381 PA----LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKL 421
           P     ++P        P PKR ++  +  +  +SV    G  ++
Sbjct: 354 PVEEVDISPST------PPPKRLKNCEIDDTASTSVSVDNGDEQV 392


>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
          Length = 431

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 6/106 (5%)

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM 393
           R +G I GI D DP RW DSKWRCL VRWDE        RVS W+IEP++ PPALN   +
Sbjct: 1   RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLPPALN---V 57

Query: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
           PR K+ R + LPS     V    G   L V  S  +   +VLQGQE
Sbjct: 58  PRLKKLRPS-LPSGAADVVAVSTGGGLLEVRESVRS--RKVLQGQE 100


>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
          Length = 407

 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 159/404 (39%), Gaps = 62/404 (15%)

Query: 49  LWHACAGPLV-TVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           +W ACA P    +P  G  V+YF  GH  Q       + +Q       P   LC V  V+
Sbjct: 20  MWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQL--AVPGPRVFLCTVAAVR 77

Query: 108 LKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF---HVHSFCKTLTASDTSTHG 164
           L+A+  T+E +A++TL P ++ D   +   P P P        +  F KTL  SD     
Sbjct: 78  LRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFVKTLMISDFDFRI 137

Query: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
            FS     A    PPL  ++    Q L  KDLHG+   F +  +G  +R  L   W  F 
Sbjct: 138 RFSAPMADAKGVFPPLVDAKA--VQPLLVKDLHGSPMTFDYGRKG--KRVTLAKVWKKFR 193

Query: 225 SSKRLVAGDAFIFL-----RGENGELRVGVRR----------AMRQQG--NVPSSVISSH 267
                V GD+ IF+       ++GEL VGVRR           MR+      P + +   
Sbjct: 194 DDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRYRPPTPPQAAVQEA 253

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEG 327
                    A    + G  FTV Y+ R    EF+VP +   E ++   +     +  +  
Sbjct: 254 V------LAAAGHAAAGERFTVAYRSRQDGDEFVVPREAVEEGLRARLTSLAEVEFVWAV 307

Query: 328 EE------APEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP 381
           E+       P  + T    G             WR L++ WD  S +      + W++ P
Sbjct: 308 EDGAPPIVGPRGKVTAIATG-----------QLWRNLEIVWDGNSEMDM--SANFWQVRP 354

Query: 382 A----LAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKL 421
                ++P        P PKR ++  +  +  +SV    G  ++
Sbjct: 355 VEEVDISPST------PPPKRLKNCEIDDTASTSVSVDNGDEQV 392


>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
          Length = 120

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/119 (43%), Positives = 65/119 (54%), Gaps = 5/119 (4%)

Query: 319 MRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWK 378
           MRF+MRFE E+A E+R TG I GI D DP RW  SKWRCL VRWD+     R  RVS W+
Sbjct: 1   MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEA-ARRNRVSPWE 59

Query: 379 IEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQG 437
           IEP+ +    ++L     KR R  M     +       G+S    D   +  F +VLQG
Sbjct: 60  IEPSGSASNSSNLMSAGLKRTRIGMTSVKLEFPTPDGIGAS----DFGESLRFRKVLQG 114


>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
 gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
 gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
 gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
          Length = 109

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 5/74 (6%)

Query: 294 RTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRF-----TGTIVGIEDADPQ 348
           R S SEF +P++++++S+  ++S GMRFKM FE E+A E+RF     TG I G+ + DP 
Sbjct: 27  RASSSEFTIPFNKFLKSLDQSFSSGMRFKMCFETEDAAERRFAIHGYTGIITGVSELDPA 86

Query: 349 RWRDSKWRCLKVRW 362
           RW  SKW+CL V W
Sbjct: 87  RWPGSKWKCLLVSW 100


>gi|361069823|gb|AEW09223.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171017|gb|AFG68785.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171018|gb|AFG68786.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171019|gb|AFG68787.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171020|gb|AFG68788.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171021|gb|AFG68789.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171022|gb|AFG68790.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171023|gb|AFG68791.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171024|gb|AFG68792.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171025|gb|AFG68793.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171026|gb|AFG68794.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171027|gb|AFG68795.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171028|gb|AFG68796.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171029|gb|AFG68797.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171030|gb|AFG68798.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171031|gb|AFG68799.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171032|gb|AFG68800.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
          Length = 89

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 3/81 (3%)

Query: 28  SNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVAD 87
           SN   +  + +   + ++  ELWHACAGPL+++PR+G  V YFPQGH+EQ   S  Q   
Sbjct: 12  SNGRLNSSEELALSKSSICMELWHACAGPLISLPRKGTLVVYFPQGHLEQASTSLKQ--- 68

Query: 88  QQMPVYDLPSKILCRVINVQL 108
           QQM  Y+LP +I CRV+NV L
Sbjct: 69  QQMRPYELPPQIFCRVLNVNL 89


>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
          Length = 450

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 142/339 (41%), Gaps = 71/339 (20%)

Query: 442 TLRGNFAERESNESDTAEKSVVWPPSLDDEKIDVVSASRRYGSENWVPPGRHEPVYTDLL 501
           T  G+  +RE    + A+K ++W  S+DD K D V +  R   E W    R + VY+D  
Sbjct: 3   TFGGSLGDREV---EIAQKPLIWGSSVDDIKQDSVGSRGRLPLEYWGSQCRQDTVYSDHY 59

Query: 502 SGFGANADPSHGFSSPFAD---------AVPVRK------SVLDQEGKFNLVARPWSLMP 546
           SG     D +     P A           +P ++       ++D+ G    ++ PW  MP
Sbjct: 60  SGIQGVRD-TQQLCGPTACQNMEMFQRLKLPPKQFQDEESGIIDRSGTKLQLSSPWPFMP 118

Query: 547 SGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNGNRVEHSHGNWLMPPLPPS 606
           S    ++ ES+ K+ V     + Q  G  ++ G    P+L+    + S GNW +  + PS
Sbjct: 119 SDNPHELTESDLKLSVTSNPSHKQA-GLGKWSGLDPPPLLSDVGSKESQGNWFVSLISPS 177

Query: 607 NFENSAH-----------------------------SRELMPKSAMVQDQEAGKSKDCKL 637
             + S                               SRE++ +  ++      +S DCKL
Sbjct: 178 QADFSGTHAPGKLERNPTRSIGTGNTGMAVQQPNLLSREMLEEKGVLS---GTRSADCKL 234

Query: 638 FGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQF----------RAFESDQKSDHSKSSKL 687
           FG  L  N V+ EP     +T+   A   D             ++ ESDQ S+ S  +K+
Sbjct: 235 FGFHLIENSVVGEP-----STLRGLAAGEDIHVSVPNITVHEPQSSESDQHSEPSSIAKM 289

Query: 688 ADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKV 726
                + +E EK SQ S   +K+  ++ Q  STRSCTKV
Sbjct: 290 DMPAAIIDE-EKSSQKS---SKETHNRPQSNSTRSCTKV 324


>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 176

 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 29/135 (21%)

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           ++ M  GV+A+  +A  T  MF V YKPR                            M+F
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQF 32

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           EG++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +  
Sbjct: 33  EGKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS 91

Query: 386 PALNSLPMPRPKRPR 400
             ++   + + K  R
Sbjct: 92  SNISQSSLKKKKHWR 106


>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 173

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 29/135 (21%)

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           ++ M  GV+A+  +A  T  MF V YKPR                            M+F
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQF 32

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           EG++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +  
Sbjct: 33  EGKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS 91

Query: 386 PALNSLPMPRPKRPR 400
             ++   + + K  R
Sbjct: 92  SDISQSSLKKKKHWR 106


>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 203

 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 29/134 (21%)

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFE 326
           + M  GV+A+  +A  T  MF V YKPR                            M+FE
Sbjct: 1   NCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFE 32

Query: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
           G++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +   
Sbjct: 33  GKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS 91

Query: 387 ALNSLPMPRPKRPR 400
            ++   + + K  R
Sbjct: 92  DISQSSLKKKKHWR 105


>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 189

 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 29/135 (21%)

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           ++ M  GV+A+  +A  T  MF V YKPR                            M+F
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQF 32

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           EG++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +  
Sbjct: 33  EGKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS 91

Query: 386 PALNSLPMPRPKRPR 400
             ++   + + K  R
Sbjct: 92  SDISQSSLKKKKHWR 106


>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
          Length = 528

 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 282 STGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIV 340
           + G  F V Y PR S  EF V       +++  +S GMRFKM FE E++     F GTI 
Sbjct: 62  AAGQPFEVVYYPRASTPEFCVKAQAVDAALRVQWSAGMRFKMAFETEDSSRISWFMGTIS 121

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKR 398
            ++ ADP  W +S WR L+V WDE   +   +RVS W +E   + P +   P   PK+
Sbjct: 122 SVQLADPVCWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVEVVSSMPPIQLTPFTLPKK 179


>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 188

 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 29/132 (21%)

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           M  GV+A+  +A  T  MF V YKPR                            M+FEG+
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGK 33

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           +  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +    +
Sbjct: 34  DFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSNI 92

Query: 389 NSLPMPRPKRPR 400
           +   + + K  R
Sbjct: 93  SQSSLKKKKHWR 104


>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 29/115 (25%)

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           ++ M  GV+A+  +A  T  MF V YKPR                            M+F
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQF 32

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           EG++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE
Sbjct: 33  EGKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 86


>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
          Length = 690

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 3/122 (2%)

Query: 137 EPP--PPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAK 194
           +PP  PP P     H F K +T SD        + ++HA+ C P LD++   P Q L+ +
Sbjct: 56  DPPSLPPKPTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVPCQTLSFE 114

Query: 195 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
           D+ G  WRFR+ +    + ++    WS F+  K+L AGD   F RG N EL +  RR + 
Sbjct: 115 DVSGKHWRFRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRLN 174

Query: 255 QQ 256
            Q
Sbjct: 175 NQ 176



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 1/108 (0%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+ C P LD++   P Q L+ +D+ G  WRFR+ + 
Sbjct: 197 HLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFEDVSGKHWRFRYSYW 255

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
              + ++   GWS F+  K+L AGD   F RG N EL +  RR +  Q
Sbjct: 256 NSSQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRLNNQ 303


>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 183

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 29/134 (21%)

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFE 326
           + M  GV+A+  +A  T  MF V YKPR                            M+FE
Sbjct: 1   NCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFE 32

Query: 327 GEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP 386
           G++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +   
Sbjct: 33  GKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS 91

Query: 387 ALNSLPMPRPKRPR 400
            ++   + + K  R
Sbjct: 92  DISQSSLKKKKHWR 105


>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 187

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 29/132 (21%)

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           M  GV+A+  +A  T  MF V YKPR                            M+FEG+
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGK 33

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           +  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +    +
Sbjct: 34  DFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDI 92

Query: 389 NSLPMPRPKRPR 400
           +   + + K  R
Sbjct: 93  SQSSLKKKKHWR 104


>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 188

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 29/132 (21%)

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           M  GV+A+  +A  T  MF V YKPR                            M+FEG 
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGN 33

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPAL 388
           +  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +    +
Sbjct: 34  DFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDI 92

Query: 389 NSLPMPRPKRPR 400
           +   + + K  R
Sbjct: 93  SQSSLKKKKHWR 104


>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 29/135 (21%)

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           ++ M  GV+A+  +A  T  MF V YKPR                            M+F
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQF 32

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           EG++  E+R+ GTI+G+ D  P  W+DS+W+ LKV+WDE S   RP +VS W IE  +  
Sbjct: 33  EGKDFSEKRYDGTIIGVNDMSP-HWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHLIPS 91

Query: 386 PALNSLPMPRPKRPR 400
             ++   + + K  R
Sbjct: 92  SDISQSSLKKEKHWR 106


>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 151

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 19/130 (14%)

Query: 69  YFPQGHIEQVEASTNQVADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPES 127
           +F +  + ++     +  D Q+P Y +LP +++C++ NV + A+  TDEV+AQ+TL P S
Sbjct: 31  FFHRAIVSRLLHQLIKEVDAQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPLS 90

Query: 128 NQDEN---------AVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLP 178
            +++             K+P          + F KTLT S+ STHGGFS+ RR A++  P
Sbjct: 91  PEEQKEPFLPIELGGASKQP---------TNYFYKTLTTSERSTHGGFSLPRRSAEKVFP 141

Query: 179 PLDMSRQPPT 188
           PLD S QPP 
Sbjct: 142 PLDFSLQPPC 151


>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 175

 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 29/135 (21%)

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           ++ M  GV+A+  +A  T  MF V YKPR                            M+F
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQF 32

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           EG++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +V  W IE  +  
Sbjct: 33  EGKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPS 91

Query: 386 PALNSLPMPRPKRPR 400
             ++   + + K  R
Sbjct: 92  SDISQSSLKKKKHWR 106


>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 29/135 (21%)

Query: 266 SHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRF 325
           ++ M  GV+A+  +A  T  MF V YKPR                            M+F
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQF 32

Query: 326 EGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAP 385
           EG++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +V  W IE  +  
Sbjct: 33  EGKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPS 91

Query: 386 PALNSLPMPRPKRPR 400
             ++   + + K  R
Sbjct: 92  SDISQSSLKKKKHWR 106


>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 227

 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           EP    P R H+  F K +T SD        + ++HA+ C P LD+S   P Q L+ +D+
Sbjct: 119 EPRESSPTREHL--FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDV 175

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRV 247
            G  WRFR+ +    + ++L  GWS FV  K+L AGD   F RG N EL +
Sbjct: 176 SGKHWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226


>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 180

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 29/128 (22%)

Query: 273 VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE 332
           V+A+  +A  T  MF V YKPR                            M+FEG++  E
Sbjct: 1   VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 32

Query: 333 QRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLP 392
           +R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE  +    ++   
Sbjct: 33  KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDISQSS 91

Query: 393 MPRPKRPR 400
           + + K  R
Sbjct: 92  LKKKKHWR 99


>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 269

 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 1/103 (0%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+ C P LD+S   P Q L+ +D+ G  WRFR+ + 
Sbjct: 163 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYW 221

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 251
              + ++L  GWS FV  K+L AGD   F RG + EL +  RR
Sbjct: 222 NSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFRR 264


>gi|304307943|gb|ADL70266.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 219

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S+ +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSAPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|304307933|gb|ADL70261.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|304307937|gb|ADL70263.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 213

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S+ +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSAPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|304307929|gb|ADL70259.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|304307935|gb|ADL70262.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|304307939|gb|ADL70264.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 212

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S+ +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSAPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|304307945|gb|ADL70267.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|304307947|gb|ADL70268.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 199

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S+ +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSAPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|284811187|gb|ADB96332.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|304307927|gb|ADL70258.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|304307931|gb|ADL70260.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 198

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S+ +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSAPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|298111013|gb|ADB96329.2| auxin response factor 1 [Arabidopsis thaliana]
          Length = 223

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S+ +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSAPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|284811179|gb|ADB96328.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 216

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S+ +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSAPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
          Length = 496

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 135/359 (37%), Gaps = 68/359 (18%)

Query: 49  LWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYD-LPSK---ILCRVI 104
           +W ACA PL  +P  G +V YFP+GH EQ  A          P+ D LPS     LC + 
Sbjct: 28  VWLACAAPLSRIPVVGTQVSYFPEGHAEQCPA----------PLPDPLPSAHRFFLCTIT 77

Query: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRF----HVHSFCKTLTASDT 160
            V L A+  T E +A ++LLP  +          P               + K LT SD 
Sbjct: 78  AVDLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDA 137

Query: 161 STHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGW 220
           +  GGFSV R  AD   P L++   PP  E       G   R   I    PR        
Sbjct: 138 NNGGGFSVPRLCADHIFPALNLDDDPPRPE---PHHGGPAGRLVGIPPHLPRH------- 187

Query: 221 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 280
                     A  A    R E    R           +VP  V+ +  +          A
Sbjct: 188 ----------AAPAPADDRVEQVRERQAAGGRGHGGVHVPQEVMEAVRL----------A 227

Query: 281 VSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR----FT 336
                    YY PR    EF+VP  +  + +   +  GM  ++R +  EA + R      
Sbjct: 228 AEQAAFRVTYY-PRHGAGEFVVPRVEVDKGLTTPWRCGM--QVRAQVMEAEDTRRLAWLN 284

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDET--STIPRPERVSLWKIEPALAPPALNSLPM 393
           GT+  +            WR L+V WD +  S+  +   V+ W+++P   PP    LPM
Sbjct: 285 GTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVDFPP----LPM 332


>gi|304307923|gb|ADL70256.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 211

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S  +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSGPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|304307941|gb|ADL70265.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 218

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S  +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSGPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|304307925|gb|ADL70257.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 212

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S  +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSGPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
 gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
          Length = 317

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 69/140 (49%), Gaps = 27/140 (19%)

Query: 39  GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSK 98
           G  + A+   LW  C GPL+T+P  G +V YFPQGH EQV AST + AD  +P+      
Sbjct: 7   GGDKKAINQALWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQKEADFDIPIS----- 61

Query: 99  ILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVH------SFC 152
                    L A+ + DEVFAQ+TL P S   +        P   P F +       SF 
Sbjct: 62  --------HLHADQENDEVFAQMTLQPFSQTAD--------PFLLPDFGIQTKQTIVSFS 105

Query: 153 KTLTASDTSTHGGFSVLRRH 172
           +TLT+S  S+     +L RH
Sbjct: 106 RTLTSSGESSPRPLLILPRH 125


>gi|284811183|gb|ADB96330.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 198

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 5/111 (4%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           F+GTIVG+++     W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 395 --RPKRPRSNMLPS--SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
             R KRPR   LPS  +  S  +T +G  K   D PSS   FS   +   F
Sbjct: 61  PQRNKRPRPPGLPSPATGPSGPVTPDGVWKSPADTPSSVPLFSPPAKAATF 111


>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 168

 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 29/107 (27%)

Query: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
           +A+  +A  T  MF V YKPR                            M+FEG++  E+
Sbjct: 1   IASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSEK 32

Query: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE 380
           R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +VS W IE
Sbjct: 33  RYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 78


>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 3/146 (2%)

Query: 239 RGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPS 298
           R  N EL +GVRR  R   N   S  SS  +    +A A    + G  F V Y PR   S
Sbjct: 3   RNSNSELFIGVRRDARWNRNGERS--SSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSS 60

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR-FTGTIVGIEDADPQRWRDSKWRC 357
           +F+V  +   E++   ++ GMR KM  E E++ +   F GT+      D   WR S WR 
Sbjct: 61  DFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRM 120

Query: 358 LKVRWDETSTIPRPERVSLWKIEPAL 383
           L+V WDE   +    RVS W++E  +
Sbjct: 121 LQVTWDEPEVLQNVMRVSPWQVELVM 146


>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
 gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
          Length = 91

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/58 (51%), Positives = 39/58 (67%)

Query: 180 LDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIF 237
           LD + +PP + + AKD+HG  W+FRHI+RG PRRHLL +GWS FV+ K    G    F
Sbjct: 13  LDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLCF 70


>gi|304308109|gb|ADL70367.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           ++GT++G++D  P  W+DSKWRCL+V WDE +TI RP +VS W+IEP +    +    M 
Sbjct: 1   YSGTVIGVKDCSPH-WKDSKWRCLEVHWDEPATISRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 395 RPKRPR 400
           + KRPR
Sbjct: 60  KNKRPR 65


>gi|304308125|gb|ADL70375.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           ++GT++G++D  P  W+DSKWRCL+V WDE ++I RP +VS W+IEP ++   +    M 
Sbjct: 1   YSGTVIGVKDCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVSSENIPKSVML 59

Query: 395 RPKRPR 400
           + KRPR
Sbjct: 60  KNKRPR 65


>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 169

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)

Query: 315 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERV 374
           +++  + +M+FEG++  E+R+ GTI+G+ D  P  W+DS+WR LKV+WDE S   RP +V
Sbjct: 1   FNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQV 59

Query: 375 SLWKIEPALAPPALNSLPMPRPKRPR 400
           S W IE  +    ++   + + K  R
Sbjct: 60  SPWDIEHLIPSSDISQSSLKKKKHWR 85


>gi|284811249|gb|ADB96363.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811251|gb|ADB96364.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811253|gb|ADB96365.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811257|gb|ADB96367.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308107|gb|ADL70366.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308111|gb|ADL70368.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308113|gb|ADL70369.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308115|gb|ADL70370.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308117|gb|ADL70371.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308119|gb|ADL70372.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308121|gb|ADL70373.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308123|gb|ADL70374.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308129|gb|ADL70377.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           ++GT++G++D  P  W+DSKWRCL+V WDE ++I RP +VS W+IEP +    +    M 
Sbjct: 1   YSGTVIGVKDCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 395 RPKRPR 400
           + KRPR
Sbjct: 60  KNKRPR 65


>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
 gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
          Length = 262

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+ C P LD+S       L+ +D+ G  WRFR+ + 
Sbjct: 157 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 215

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 251
              + ++L  GWS FV  K+L AGD   F RG   EL +  RR
Sbjct: 216 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 258


>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
 gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
          Length = 261

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+ C P LD+S       L+ +D+ G  WRFR+ + 
Sbjct: 156 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 214

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 251
              + ++L  GWS FV  K+L AGD   F RG   EL +  RR
Sbjct: 215 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 257


>gi|284811255|gb|ADB96366.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           ++GT++G++D  P  W+DSKWRCL+V WDE ++I RP +VS W+ EP ++   +    M 
Sbjct: 1   YSGTVIGVKDCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWETEPFVSSENIPKSVML 59

Query: 395 RPKRPR 400
           + KRPR
Sbjct: 60  KNKRPR 65


>gi|304307977|gb|ADL70301.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 229

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 3/87 (3%)

Query: 353 SKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSV 412
           SKWRCL VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + 
Sbjct: 1   SKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNP 60

Query: 413 LTREGSSKLNVDPSSATGFSRVLQGQE 439
           +T+ G     +D   +   S+VLQGQE
Sbjct: 61  ITKRGGF---LDFEESVRPSKVLQGQE 84


>gi|304308105|gb|ADL70365.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308127|gb|ADL70376.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP 394
           ++GT++G++D  P  W+DSKWRCL+V WDE ++  RP +VS W+IEP +    +    M 
Sbjct: 1   YSGTVIGVKDCSPH-WKDSKWRCLEVHWDEPASTSRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 395 RPKRPR 400
           + KRPR
Sbjct: 60  KNKRPR 65


>gi|304307981|gb|ADL70303.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 258

 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           KWRCL VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +
Sbjct: 1   KWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPI 60

Query: 414 TREGSSKLNVDPSSATGFSRVLQGQE 439
           T+ G     +D   +   S+VLQGQE
Sbjct: 61  TKRGGF---LDFEESVRPSKVLQGQE 83


>gi|304307993|gb|ADL70309.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 256

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           KWRCL VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +
Sbjct: 1   KWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPI 60

Query: 414 TREGSSKLNVDPSSATGFSRVLQGQE 439
           T+ G     +D   +   S+VLQGQE
Sbjct: 61  TKRGGF---LDFEESVRPSKVLQGQE 83


>gi|304307979|gb|ADL70302.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 253

 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           KWRCL VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +
Sbjct: 1   KWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPI 60

Query: 414 TREGSSKLNVDPSSATGFSRVLQGQE 439
           T+ G     +D   +   S+VLQGQE
Sbjct: 61  TKRGGF---LDFEESVRPSKVLQGQE 83


>gi|80750878|dbj|BAE48151.1| auxin response factor 3 [Arabidopsis thaliana]
          Length = 100

 Score = 69.3 bits (168), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 7/63 (11%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGPL+++P+ G  V YFPQGH+E       Q  D    +Y LP  + CR+++V+
Sbjct: 45  ELWHACAGPLISLPKRGSLVLYFPQGHLE-------QAPDFSAAIYGLPPHVFCRILDVK 97

Query: 108 LKA 110
           L A
Sbjct: 98  LHA 100


>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
          Length = 1203

 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 43/61 (70%)

Query: 241 ENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEF 300
           E   L  GVRRA RQQ ++PSSV+S+ S+H+GVLA   HA +  + FT++Y PR  PS+F
Sbjct: 500 EQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRACPSKF 559

Query: 301 I 301
           I
Sbjct: 560 I 560


>gi|304307975|gb|ADL70300.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 227

 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 354 KWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           KWRCL VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +
Sbjct: 1   KWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPI 60

Query: 414 TREGSSKLNVDPSSATGFSRVLQGQE 439
           T+ G     +D   +   S+VLQGQE
Sbjct: 61  TKRGGF---LDFEESVRPSKVLQGQE 83


>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
 gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 4/120 (3%)

Query: 284 GTMFTVYYKPRTS-PSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQR-FTGTIVG 341
           G  F V Y PR    S+F+V  +    ++   ++ GMR KM  E E++     F GT+ G
Sbjct: 22  GLPFDVVYYPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSG 81

Query: 342 IEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSL--PMPRPKRP 399
               D   WR S WR L++ WDE   +   +RVS W++E     P L +   PM + + P
Sbjct: 82  TGLPDSGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVEFVATTPQLQAAFPPMKKLRYP 141


>gi|125552982|gb|EAY98691.1| hypothetical protein OsI_20621 [Oryza sativa Indica Group]
          Length = 102

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)

Query: 48  ELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQ 107
           ELWHACAGP V +PR G  + Y PQ H+    A              +P  + CRV+ V+
Sbjct: 23  ELWHACAGPGVALPRRGSALVYLPQAHL---AADGGGGEVPPAGAAAVPPHVACRVVGVE 79

Query: 108 LKAEPDTDEVFAQVTLLPE 126
           L+A+  TDEV+A++ L+ E
Sbjct: 80  LRADAATDEVYARLALVAE 98


>gi|147765452|emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
          Length = 893

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 43/67 (64%)

Query: 114 TDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHA 173
           TDEV+AQ+TL P S Q++           P +   + FCKTL ASDTSTHGGFSV RR A
Sbjct: 376 TDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRAA 435

Query: 174 DECLPPL 180
           ++  PPL
Sbjct: 436 EKVFPPL 442


>gi|242075446|ref|XP_002447659.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
 gi|241938842|gb|EES11987.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
          Length = 74

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 1/43 (2%)

Query: 318 GMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKV 360
           G+RF+MRFEGEEA E+RFTGTIV  E+ DP  W DS WR LKV
Sbjct: 15  GVRFRMRFEGEEALERRFTGTIVRCENLDPL-WPDSSWRYLKV 56


>gi|284811185|gb|ADB96331.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 183

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 5/96 (5%)

Query: 350 WRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMP--RPKRPRSNMLPS- 406
           W DS+WR LKV+WDE S++ RPERVS W++EP +A    +S P P  R KRPR   LPS 
Sbjct: 1   WHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSP 60

Query: 407 -SPDSSVLTREGSSKLNVD-PSSATGFSRVLQGQEF 440
            +  S+ +T +G  K   D PSS   FS   +   F
Sbjct: 61  ATGPSAPVTPDGVWKSPGDTPSSVPLFSPPAKAATF 96


>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
 gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
          Length = 274

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE--------LAAKDLHGNE 200
           H F K +T SD        + ++HA+   P LD S               L+ +D  G  
Sbjct: 28  HMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGGGKGLVLSFEDRAGKA 87

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 244
           WRFR+ +    + +++  GWS FV  KRL AGD  +F RG  GE
Sbjct: 88  WRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAGGE 131


>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
          Length = 409

 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD +     Q L+ +D  G  WRFR+ + 
Sbjct: 92  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYSYW 150

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR 246
              + +++  GWS FV  KRL AGD   F RG     R
Sbjct: 151 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAGDTAR 188


>gi|449445748|ref|XP_004140634.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
           [Cucumis sativus]
 gi|449515921|ref|XP_004164996.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
           [Cucumis sativus]
          Length = 354

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 12/128 (9%)

Query: 113 DTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRH 172
           D   +   ++L  ESN   + VE+E           H F K +T SD        + ++H
Sbjct: 67  DHQPILMDLSLRMESNGFADVVERE-----------HMFDKVVTPSDVGKLNRLVIPKQH 115

Query: 173 ADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAG 232
           A++  P LD S       L  +D HG  WRFR+ +    + +++  GWS FV  K+L AG
Sbjct: 116 AEKYFP-LDSSTNDKGLILNFEDRHGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAG 174

Query: 233 DAFIFLRG 240
           D   F R 
Sbjct: 175 DIVSFHRA 182


>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 354

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
           PPP + H+  F K +T SD        + ++HA+   P LD S       L  +D +G  
Sbjct: 45  PPPEKEHM--FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKM 101

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 244
           WRFR+ +    + +++  GWS FV  K+L AGD   F RG   E
Sbjct: 102 WRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDE 145


>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
           vinifera]
          Length = 411

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 4/127 (3%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D  G  WRFR+ + 
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVRRAMRQQGNVPSSVISS 266
              + +++  GWS FV  K+L AGD   F R  GE+G+ R+ +    R     PSS ++ 
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSS-LAH 227

Query: 267 HSMHLGV 273
           H  H  V
Sbjct: 228 HFFHRSV 234


>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
           thaliana]
 gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
           AltName: Full=Protein NGATHA3
 gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
 gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
 gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
           thaliana]
          Length = 358

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNE 200
           PPP + H+  F K +T SD        + ++HA+   P LD S       L  +D +G  
Sbjct: 48  PPPEKEHM--FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKM 104

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 244
           WRFR+ +    + +++  GWS FV  K+L AGD   F RG   E
Sbjct: 105 WRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDE 148


>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
          Length = 505

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 4/127 (3%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D  G  WRFR+ + 
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVRRAMRQQGNVPSSVISS 266
              + +++  GWS FV  K+L AGD   F R  GE+G+ R+ +    R     PSS ++ 
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSS-LAH 227

Query: 267 HSMHLGV 273
           H  H  V
Sbjct: 228 HFFHRSV 234


>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Vitis vinifera]
          Length = 461

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D  G  WRFR+ + 
Sbjct: 137 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 195

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVRRAMRQQGNVPSSVISS 266
              + +++  GWS FV  K+L AGD   F R  GE+G+ R+ +    R     P+S+  S
Sbjct: 196 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL--S 253

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRTS 296
           H +HL        +V  G ++++   P  S
Sbjct: 254 H-LHLPTQLPFSQSVRWGRLYSLPQSPSMS 282


>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
          Length = 249

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 5/169 (2%)

Query: 94  DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCK 153
           DL    L  V + Q   E D + ++ Q   L +       V    P         H F K
Sbjct: 5   DLSLGTLVEVEDSQEVQEEDNN-LYKQQRALGQDLHRRQGVSGGGPSHSHGVEREHMFDK 63

Query: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
            LT SD        V ++HA+   P         + +L  +D  G  W+FR+ + G  + 
Sbjct: 64  VLTPSDVGKLNRLVVPKQHAERFFPAAGAG----STQLCFQDRGGALWQFRYSYWGSSQS 119

Query: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           +++  GWS FV + RL AGD   F R   G   +  R   R++ +V  S
Sbjct: 120 YVMTKGWSRFVRAARLAAGDTVTFSRSGGGRYFIEYRHCQRRRRDVDIS 168


>gi|413938320|gb|AFW72871.1| hypothetical protein ZEAMMB73_098228 [Zea mays]
          Length = 303

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
           AL+ ELW ACAGPL  VP  GE+VYY PQGHIEQ+  +  +   +++ V         ++
Sbjct: 136 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQISQNVVRHIHKELLVE--------KM 187

Query: 104 INVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEP 138
               + A P         T  P        +EK P
Sbjct: 188 ARAAVDAPPANGGTCCHATKGPGYAMSLETIEKGP 222


>gi|218197101|gb|EEC79528.1| hypothetical protein OsI_20622 [Oryza sativa Indica Group]
          Length = 380

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 341 GIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPR 400
           GI + DP +W  S+W+CL VRWD+++      RVS W+IE      ++        KR +
Sbjct: 15  GISEVDPIKWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTHSLSSGSKRTK 74

Query: 401 SNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQEFSTLR 444
            +    S D+  L   G    + D      F RVLQGQEF   R
Sbjct: 75  LHFPQGSLDTPFLNGNG----HPDSMGTENFHRVLQGQEFRGSR 114


>gi|296089028|emb|CBI38731.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 6/149 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D  G  WRFR+ + 
Sbjct: 93  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 151

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVRRAMRQQGNVPSSVISS 266
              + +++  GWS FV  K+L AGD   F R  GE+G+ R+ +    R++ + P     S
Sbjct: 152 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYI--DWRRRPDAPDPTSLS 209

Query: 267 HSMHLGVLATAWHAVSTGTMFTVYYKPRT 295
           H +HL        +V  G ++++   P T
Sbjct: 210 H-LHLPTQLPFSQSVRWGRLYSLPQSPNT 237


>gi|297742476|emb|CBI34625.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 4/124 (3%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D  G  WRFR+ + 
Sbjct: 155 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 213

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVRRAMRQQGNVPSSVISS 266
              + +++  GWS FV  K+L AGD   F R  GE+G+ R+ +    R     PSS ++ 
Sbjct: 214 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSS-LAH 272

Query: 267 HSMH 270
           H  H
Sbjct: 273 HFFH 276


>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
 gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
          Length = 253

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K LT SD        V ++HA+   P      Q     L  +D  G  W+FR+ + 
Sbjct: 55  HMFDKVLTPSDVGKLNRLVVPKQHAERFFPAAGAGTQ-----LCFQDCGGALWQFRYSYW 109

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR 246
           G  + +++  GWS FV + RL AGD   F RG  G  R
Sbjct: 110 GSSQSYVMTKGWSRFVRAARLAAGDTVTFSRGAGGGGR 147


>gi|255548087|ref|XP_002515100.1| hypothetical protein RCOM_1340820 [Ricinus communis]
 gi|223545580|gb|EEF47084.1| hypothetical protein RCOM_1340820 [Ricinus communis]
          Length = 450

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D +G  WRFR+ + 
Sbjct: 123 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKLWRFRYSYW 181

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVRRAMRQQGNVPSSVISS 266
              + +++  GWS FV  K+L AGD   F R  GE+G+ R+ +    R++ N P     +
Sbjct: 182 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKHRLYI--DWRRRPNAPDPTSFT 239

Query: 267 H 267
           H
Sbjct: 240 H 240


>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 322

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 5/107 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L+ +D  G  WRFR+ + 
Sbjct: 38  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYW 96

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG----ENGELRVGVRR 251
              + +++  GWS FV  KRL AGD   F RG      G L +  RR
Sbjct: 97  NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 143


>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
           [Brachypodium distachyon]
          Length = 213

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD  +      L+ ++  G  WRFR+ + 
Sbjct: 5   HMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDFDKGNGGIILSFEERGGKAWRFRYSYW 63

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  KRL+AGDA +F RG
Sbjct: 64  NSSQSYVMTKGWSRFVKDKRLLAGDAVLFARG 95


>gi|357489187|ref|XP_003614881.1| Auxin response factor [Medicago truncatula]
 gi|355516216|gb|AES97839.1| Auxin response factor [Medicago truncatula]
          Length = 356

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 11/146 (7%)

Query: 101 CRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPR-FHVHSFCKTLTASD 159
           C +  V L  +  TDEVFA++ L P + Q+        P        ++ S+ KTLT   
Sbjct: 9   CIISAVNLFVDALTDEVFAKLLLTPLTAQEPPPPPPVVPGQEDDDGNNLVSYFKTLTT-- 66

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSG 219
           T T   F++    AD   P LD+ +   +Q +   DL   EW   ++     +   L++G
Sbjct: 67  TETKSVFNISHECADLIFPKLDLEK---SQIIIVTDLKSQEWGCTYV-----KNSRLRTG 118

Query: 220 WSVFVSSKRLVAGDAFIFLRGENGEL 245
           WS F   K+LVA D+ +F++  +  L
Sbjct: 119 WSHFRKEKKLVAKDSVVFMKNSSAVL 144


>gi|414868950|tpg|DAA47507.1| TPA: hypothetical protein ZEAMMB73_035781, partial [Zea mays]
          Length = 78

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 28/35 (80%)

Query: 44 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQV 78
           L +ELWHACAGPLV++P  G RV YFPQGH EQV
Sbjct: 21 CLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQV 55


>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
 gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
          Length = 420

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD +       L+ +D  G  WRFR+ + 
Sbjct: 98  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYW 156

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR 246
              + +++  GWS FV  KRL AGD   F RG     R
Sbjct: 157 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAGEAAR 194


>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
          Length = 400

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 129 QDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 188
           +D   +EKE           H F K +T SD        + ++HA++  P LD +     
Sbjct: 76  EDVEVIEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKG 123

Query: 189 QELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
             L+ +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG
Sbjct: 124 LLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175


>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
          Length = 400

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 129 QDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 188
           +D   +EKE           H F K +T SD        + ++HA++  P LD +     
Sbjct: 76  EDVEVIEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKG 123

Query: 189 QELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
             L+ +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG
Sbjct: 124 LLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175


>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD +       L+ +D  G  WRFR+ + 
Sbjct: 88  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYSYW 146

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR 246
              + +++  GWS FV  KRL AGD   F RG     R
Sbjct: 147 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADATR 184


>gi|449456452|ref|XP_004145963.1| PREDICTED: uncharacterized protein LOC101211271 [Cucumis sativus]
          Length = 336

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD S       L  +D +G  WRFR+ + 
Sbjct: 55  HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYW 113

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  KRL AGD   F RG
Sbjct: 114 NSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRG 145


>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
          Length = 293

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 129 QDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 188
           +D   +EKE           H F K +T SD        + ++HA++  P LD +     
Sbjct: 76  EDVEVIEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKG 123

Query: 189 QELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
             L+ +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG
Sbjct: 124 LLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175


>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
 gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
 gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
          Length = 316

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 129 QDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 188
           +D   +EKE           H F K +T SD        + ++HA++  P LD +     
Sbjct: 99  EDVEVIEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKG 146

Query: 189 QELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
             L+ +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG
Sbjct: 147 LLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 198


>gi|449507228|ref|XP_004162969.1| PREDICTED: uncharacterized protein LOC101232454 [Cucumis sativus]
          Length = 347

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD S       L  +D +G  WRFR+ + 
Sbjct: 55  HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYW 113

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  KRL AGD   F RG
Sbjct: 114 NSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRG 145


>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
          Length = 404

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD +       L+ +D  G  WRFR+ + 
Sbjct: 85  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYW 143

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR 246
              + +++  GWS FV  KRL AGD   F RG     R
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAAR 181


>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
          Length = 308

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 133 AVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELA 192
           AVEKE           H F K +T SD        + ++HA++  P LD +       L+
Sbjct: 30  AVEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLS 77

Query: 193 AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG----ENGELRVG 248
            +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG      G L + 
Sbjct: 78  FEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFID 137

Query: 249 VRR 251
            RR
Sbjct: 138 WRR 140


>gi|242042451|ref|XP_002468620.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
 gi|241922474|gb|EER95618.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
          Length = 330

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 133 AVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELA 192
           AVEKE           H F K +T SD        + ++HA++  P LD +       L+
Sbjct: 32  AVEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLS 79

Query: 193 AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG----ENGELRVG 248
            +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG      G L + 
Sbjct: 80  FEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGDAARGRLFID 139

Query: 249 VRR 251
            RR
Sbjct: 140 WRR 142


>gi|413926488|gb|AFW66420.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
          Length = 94

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 28/35 (80%)

Query: 44 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQV 78
           L +ELWHACAGPLV++P  G RV YFPQGH EQV
Sbjct: 26 CLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQV 60


>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
 gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
 gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
           Japonica Group]
 gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
          Length = 311

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 133 AVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELA 192
           AVEKE           H F K +T SD        + ++HA++  P LD +       L+
Sbjct: 30  AVEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLS 77

Query: 193 AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG----ENGELRVG 248
            +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG      G L + 
Sbjct: 78  FEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFID 137

Query: 249 VRR 251
            RR
Sbjct: 138 WRR 140


>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
           thaliana]
 gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
           AltName: Full=Protein NGATHA 4
 gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
           thaliana]
          Length = 333

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K LT SD        + ++HA+   P  D         L  +D +G  WRFR+ + 
Sbjct: 34  HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQN---GTVLDFQDKNGKMWRFRYSYW 90

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  K+L AGD   F RG
Sbjct: 91  NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122


>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
           [Brachypodium distachyon]
          Length = 413

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD +       L+ +D  G  WRFR+ + 
Sbjct: 98  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 156

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  KRL AGD   F RG
Sbjct: 157 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188


>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
 gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
 gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
 gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
          Length = 328

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K LT SD        + ++HA+   P  D         L  +D +G  WRFR+ + 
Sbjct: 29  HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQN---GTVLDFQDKNGKMWRFRYSYW 85

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  K+L AGD   F RG
Sbjct: 86  NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 117


>gi|414872892|tpg|DAA51449.1| TPA: hypothetical protein ZEAMMB73_766126 [Zea mays]
          Length = 271

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 27/34 (79%)

Query: 44 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQ 77
          AL+ ELW ACAGPL  VP  G++VYY PQGHIEQ
Sbjct: 47 ALFVELWKACAGPLSCVPPLGQKVYYLPQGHIEQ 80


>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
          Length = 259

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD +       L+ +D  G  WRFR+ + 
Sbjct: 38  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  KRL AGD   F RG
Sbjct: 97  NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128


>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
          Length = 287

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 129 QDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPT 188
           +D   +EKE           H F K +T SD        + ++HA++  P LD +     
Sbjct: 76  EDVEVIEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKG 123

Query: 189 QELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
             L+ +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG
Sbjct: 124 LLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175


>gi|242062916|ref|XP_002452747.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
 gi|241932578|gb|EES05723.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
          Length = 434

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 12/114 (10%)

Query: 133 AVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELA 192
           AVEKE           H F K +T SD        + +++A++  P LD +       L+
Sbjct: 96  AVEKE-----------HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLS 143

Query: 193 AKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR 246
            +D  G  WRFR+ +    + +++  GWS FV  KRLVAGD   F R    + R
Sbjct: 144 FEDSAGKHWRFRYSYWNSSQSYVMTKGWSRFVKEKRLVAGDTVSFSRAAAEDAR 197


>gi|356503831|ref|XP_003520706.1| PREDICTED: B3 domain-containing protein At2g36080-like [Glycine
           max]
          Length = 276

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 2/121 (1%)

Query: 148 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF 207
           V  F K LT SD        + ++HA++  P LD S       L+ +D  G  WRFR+ +
Sbjct: 53  VAMFEKPLTPSDVGKLNRLVIPKQHAEKHFP-LD-SSAAKGLLLSFEDESGKCWRFRYSY 110

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 267
               + ++L  GWS +V  KRL AGD  +F R  +   R  +  + RQ   VP+ V ++ 
Sbjct: 111 WNSSQSYVLTKGWSRYVKDKRLHAGDVVLFHRHRSLPQRFFISCSRRQPNPVPAHVSTTR 170

Query: 268 S 268
           S
Sbjct: 171 S 171


>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
          Length = 327

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 5/107 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD +       L+ +D  G  WRFR+ + 
Sbjct: 36  HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYSYW 94

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG----ENGELRVGVRR 251
              + +++  GWS FV  KRL AGD   F RG      G L +  RR
Sbjct: 95  NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 141


>gi|356522464|ref|XP_003529866.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Glycine
           max]
          Length = 421

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D +G  WRFR+ + 
Sbjct: 59  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRYSYW 117

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL 245
              + +++  GWS FV  K+L AGD   F RG  GEL
Sbjct: 118 NSSQSYVMTKGWSRFVKEKKLDAGDMVSFQRGV-GEL 153


>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 314

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 24/260 (9%)

Query: 480 RRYGSENWVPPGRHEPVYTDLLSGF---GANADPSHGFSS---PFADAVP-----VRKSV 528
           R+ GS+ W+   R +  Y+++LSG+      A  S GF S     A   P     V    
Sbjct: 3   RKLGSDIWMRMNRPD-GYSEMLSGYQPPNEGARNSQGFCSLPDQIAAGRPNFWHTVNAHY 61

Query: 529 LDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNG 588
            DQ+G  NL    WS+MPS     M   +  +  + G ++ Q   N ++G  G Y  L G
Sbjct: 62  QDQQGNHNLFPGSWSMMPSSTGFGMNRQSYPMIQEVGGMS-QSCTNTKFGN-GVYAALPG 119

Query: 589 NRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNH 646
             ++     W     P    ++ A  R + P+  ++   EA K K   CKLFGI L S  
Sbjct: 120 RGIDRYPSGWFGHTTPGGRVDD-AQPRVIKPQPLVLAHGEALKMKGNSCKLFGIHLDSP- 177

Query: 647 VMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQT 706
              EP+ S  +     A          ++D+  +  K+ K     QV    E+  Q S  
Sbjct: 178 AKSEPLKSPPSVATPAAEKW--MADGIDADKSPEPHKTPKQLGATQVDPVPERCPQAS-- 233

Query: 707 HTKDVRSKTQCGSTRSCTKV 726
             +  + K+Q GSTRSC KV
Sbjct: 234 --RGTQCKSQGGSTRSCKKV 251


>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
 gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 379

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 24/260 (9%)

Query: 480 RRYGSENWVPPGRHEPVYTDLLSGF---GANADPSHGFSS---PFADAVP-----VRKSV 528
           R+ GS+ W+   R +  Y+++LSG+      A  S GF S     A   P     V    
Sbjct: 3   RKLGSDIWMRMNRPDG-YSEMLSGYQPPNEGARNSQGFCSLPDQIAAGRPNFWHTVNAHY 61

Query: 529 LDQEGKFNLVARPWSLMPSGPSLKMPESNAKVPVQGGDVNYQVRGNVRYGGFGDYPMLNG 588
            DQ+G  NL    WS+MPS     M   +  +  + G ++ Q   N ++G  G Y  L G
Sbjct: 62  QDQQGNHNLFPGSWSMMPSSTGFGMNRQSYPMIQEVGGMS-QSCTNTKFGN-GVYAALPG 119

Query: 589 NRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAMVQDQEAGKSK--DCKLFGIPLFSNH 646
             ++     W     P    ++ A  R + P+  ++   EA K K   CKLFGI L S  
Sbjct: 120 RGIDRYPSGWFGHTTPGGRVDD-AQPRVIKPQPLVLAHGEALKMKGNSCKLFGIHLDS-P 177

Query: 647 VMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSDHSKSSKLADDNQVFNEHEKPSQPSQT 706
              EP+ S  +     A          ++D+  +  K+ K     QV    E+  Q S  
Sbjct: 178 AKSEPLKSPPSVATPAAEKW--MADGIDADKSPEPHKTPKQLGATQVDPVPERCPQAS-- 233

Query: 707 HTKDVRSKTQCGSTRSCTKV 726
             +  + K+Q GSTRSC KV
Sbjct: 234 --RGTQCKSQGGSTRSCKKV 251


>gi|308080706|ref|NP_001183918.1| uncharacterized protein LOC100502511 [Zea mays]
 gi|238015438|gb|ACR38754.1| unknown [Zea mays]
 gi|413938267|gb|AFW72818.1| hypothetical protein ZEAMMB73_941356 [Zea mays]
          Length = 422

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + +++A++  P LD +       L+ +D  G  WRFR+ + 
Sbjct: 99  HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYW 157

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR 246
              + +++  GWS FV  KRLVAGD   F R    + R
Sbjct: 158 NSSQSYVMTKGWSRFVKEKRLVAGDTVSFSRAAAEDAR 195


>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
          Length = 342

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLP-SSPDSSVL 413
           V+WDE S+I RP++VS W++EP +A   L++ P  R KRPR  +LP SSPD++VL
Sbjct: 1   VQWDEPSSILRPDKVSAWELEPLVASNPLSTQPTQRNKRPRPTVLPSSSPDATVL 55


>gi|357157529|ref|XP_003577828.1| PREDICTED: B3 domain-containing protein Os11g0156000-like
           [Brachypodium distachyon]
          Length = 277

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K LT SD        + ++HA+ C P L          L+  D  G  WRFR+ + 
Sbjct: 36  HLFEKALTPSDVGKLNRLVIPKQHAERCFP-LGGDSGEKGLLLSFDDEAGKPWRFRYSYW 94

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR----GENGELRVGVRR 251
              + ++L  GWS +V  K+L AGD   F R    G    L +G RR
Sbjct: 95  TSSQSYVLTKGWSRYVKEKQLDAGDVVHFERVRGLGTGDRLFIGCRR 141


>gi|18407193|ref|NP_566089.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
           thaliana]
 gi|75100798|sp|O82799.1|NGA1_ARATH RecName: Full=B3 domain-containing transcription factor NGA1;
           AltName: Full=Protein NGATHA 1
 gi|3522951|gb|AAC34233.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|20197317|gb|AAM15018.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|26451145|dbj|BAC42676.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|30793817|gb|AAP40361.1| putative RAV B3 domain DNA binding protein [Arabidopsis thaliana]
 gi|330255671|gb|AEC10765.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
           thaliana]
          Length = 310

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD S       L  +DL G  WRFR+ + 
Sbjct: 33  HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR-----GENGELRVGVRR 251
              + +++  GWS FV  K+L AGD   F R     G +  L +  RR
Sbjct: 92  NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 139


>gi|5091628|gb|AAD39616.1|AC007454_15 End is cut off, partial [Arabidopsis thaliana]
          Length = 33

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/32 (65%), Positives = 27/32 (84%)

Query: 45 LYTELWHACAGPLVTVPREGERVYYFPQGHIE 76
          +Y +LW+ CAGPL  +P+ GE+VYYFPQGHIE
Sbjct: 1  MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIE 32


>gi|227060666|gb|ACP18971.1| NGATHA1 [Arabidopsis thaliana]
          Length = 310

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD S       L  +DL G  WRFR+ + 
Sbjct: 33  HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR-----GENGELRVGVRR 251
              + +++  GWS FV  K+L AGD   F R     G +  L +  RR
Sbjct: 92  NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 139


>gi|255555825|ref|XP_002518948.1| transcription factor, putative [Ricinus communis]
 gi|223541935|gb|EEF43481.1| transcription factor, putative [Ricinus communis]
          Length = 406

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D  G  WRFR+ + 
Sbjct: 101 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLLLNFEDKTGKAWRFRYSYW 159

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  K+L AGD   F RG
Sbjct: 160 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRG 191


>gi|414867524|tpg|DAA46081.1| TPA: hypothetical protein ZEAMMB73_334184 [Zea mays]
          Length = 273

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 11/106 (10%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE-----------LAAKDLH 197
           H F K +T SD        + ++HA+   P LD S    +             L+ +D  
Sbjct: 28  HMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAASASASAGGGKAGLVLSFEDRA 87

Query: 198 GNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENG 243
           G  WRFR+ +    + +++  GWS FV  KRL AGD  +F RG   
Sbjct: 88  GKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAGA 133


>gi|297789622|ref|XP_002862757.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308467|gb|EFH39015.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 312

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD S       L  +DL G  WRFR+ + 
Sbjct: 35  HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 93

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR-----GENGELRVGVRR 251
              + +++  GWS FV  K+L AGD   F R     G +  L +  RR
Sbjct: 94  NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 141


>gi|297824777|ref|XP_002880271.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326110|gb|EFH56530.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 311

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD S       L  +DL G  WRFR+ + 
Sbjct: 34  HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 92

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR-----GENGELRVGVRR 251
              + +++  GWS FV  K+L AGD   F R     G +  L +  RR
Sbjct: 93  NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 140


>gi|356560217|ref|XP_003548390.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 420

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D +G  WRFR+ + 
Sbjct: 31  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRYSYW 89

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  K+L AGD   F RG
Sbjct: 90  NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 121


>gi|304308209|gb|ADL70417.1| truncated auxin response factor 13 [Arabidopsis thaliana]
          Length = 63

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 29/92 (31%)

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKM 323
           IS++ M  GV+A+  +A  T  MF V YKPR                            M
Sbjct: 1   ISANCMQHGVIASVVNAFKTKCMFNVVYKPR----------------------------M 32

Query: 324 RFEGEEAPEQRFTGTIVGIEDADPQRWRDSKW 355
           +FEG++  E+R+ GTI+G+ D  P  W+DS+W
Sbjct: 33  QFEGKDFSEKRYDGTIIGVNDMSPH-WKDSEW 63


>gi|75139062|sp|Q7EZD5.1|Y8577_ORYSJ RecName: Full=Putative B3 domain-containing protein Os08g0157700
 gi|37806146|dbj|BAC99651.1| AP2 domain protein RAP2.8 (RAV2)-like [Oryza sativa Japonica Group]
 gi|125602248|gb|EAZ41573.1| hypothetical protein OsJ_26107 [Oryza sativa Japonica Group]
          Length = 287

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        V ++HA+   P      Q     L  +D  G  WRFR+ + 
Sbjct: 69  HMFDKVVTPSDVGKLNRLVVPKQHAERFFPAAAAGTQ-----LCFEDRAGTPWRFRYSYW 123

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 257
           G  + +++  GWS FV + RL AGD   F R  +G   +  R   R  G
Sbjct: 124 GSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHRHGG 172


>gi|125560208|gb|EAZ05656.1| hypothetical protein OsI_27883 [Oryza sativa Indica Group]
          Length = 286

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        V ++HA+   P      Q     L  +D  G  WRFR+ + 
Sbjct: 69  HMFDKVVTPSDVGKLNRLVVPKQHAERFFPAAAAGTQ-----LCFEDRAGTPWRFRYSYW 123

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 257
           G  + +++  GWS FV + RL AGD   F R  +G   +  R   R  G
Sbjct: 124 GSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHRHGG 172


>gi|291197510|emb|CAZ68123.1| NGATHA1 [Arabidopsis halleri subsp. halleri]
          Length = 313

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD S       L  +DL G  WRFR+ + 
Sbjct: 35  HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 93

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR-----GENGELRVGVRR 251
              + +++  GWS FV  K+L AGD   F R     G +  L +  RR
Sbjct: 94  NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 141


>gi|167516522|ref|XP_001742602.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779226|gb|EDQ92840.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1722

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 8/98 (8%)

Query: 299 EFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCL 358
           +F+V   +Y  ++   +  G RF    +GE+     + GT++ +  +DPQR+ DS WRC 
Sbjct: 859 DFVVLRGRYENAVATQWQPGHRFSATIDGEQ-----WYGTVLEVSPSDPQRFPDSPWRCC 913

Query: 359 KVRWDETSTIPR--PERVSLWKIEPALAPPALNSLPMP 394
            VRWD   T      ER++ W++ P LAP   N  P P
Sbjct: 914 VVRWDVDGTGEAWPDERLNPWEMTP-LAPDDANFEPPP 950


>gi|218191398|gb|EEC73825.1| hypothetical protein OsI_08552 [Oryza sativa Indica Group]
          Length = 113

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 25/36 (69%)

Query: 44 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVE 79
           L  ELWHAC+ PLV +P  G RV YFPQGH EQV 
Sbjct: 26 CLNLELWHACSSPLVCLPSVGTRVVYFPQGHSEQVS 61


>gi|302398541|gb|ADL36565.1| ABI3L domain class transcription factor [Malus x domestica]
          Length = 382

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 16/126 (12%)

Query: 128 NQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPP 187
           N D++  EKEP            F K LT SD        + ++HA++  P   +     
Sbjct: 110 NSDDSDDEKEP-----------MFEKPLTPSDVGKLNRLVIPKQHAEKYFP---LGSGDS 155

Query: 188 TQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIF--LRGENGEL 245
              L+ +D  G  WRFR+ +    + ++L  GWS +V  KRL AGD  +F   R     L
Sbjct: 156 GLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLNAGDVVLFERRRANTDRL 215

Query: 246 RVGVRR 251
            +G RR
Sbjct: 216 SIGWRR 221


>gi|358347636|ref|XP_003637862.1| Maturase K [Medicago truncatula]
 gi|355503797|gb|AES85000.1| Maturase K [Medicago truncatula]
          Length = 624

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD +       L  +D +G  WRFR+ + 
Sbjct: 170 HMFDKAVTPSDVGKLNRLVIPKQHAEKYFP-LDSTSNEKGLLLNFEDRNGKLWRFRYSYW 228

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL 245
              + +++  GWS FV  K+L AGD   F RG  GEL
Sbjct: 229 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGV-GEL 264


>gi|164458456|gb|ABY57635.1| RAV2 [Solanum lycopersicum]
          Length = 395

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + ++HA++  P L          L  +DL+G  WRFR+ +   
Sbjct: 207 FEKVVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNNSKGVLLNFEDLNGKVWRFRYSYWNS 265

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263
            + ++L  GWS FV  K L AGD   F R  +G+ ++ +    +  GN    V
Sbjct: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYIDFKAKNVGNTSMVV 318


>gi|304307987|gb|ADL70306.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 247

 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|298111060|gb|ADB96342.2| auxin response factor 4 [Arabidopsis thaliana]
          Length = 236

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|284811199|gb|ADB96338.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|284811203|gb|ADB96340.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|304307989|gb|ADL70307.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 235

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|298111058|gb|ADB96339.2| auxin response factor 4 [Arabidopsis thaliana]
          Length = 236

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 2   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 61

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 62  ---LDFEESVRPSKVLQGQE 78


>gi|304307985|gb|ADL70305.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 222

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|284811205|gb|ADB96341.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|304307995|gb|ADL70310.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 233

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K LT SD        + ++HA+   P   +        L  +D +G  WRFR+ + 
Sbjct: 32  HMFDKVLTPSDVGKLNRLVIPKQHAENYFP---LEGNQNGTVLDFQDRNGKMWRFRYSYW 88

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  K+L AGD   F RG
Sbjct: 89  NSSQSYVMTKGWSRFVKEKKLFAGDTVSFHRG 120


>gi|302398539|gb|ADL36564.1| ABI3L domain class transcription factor [Malus x domestica]
          Length = 439

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA+   P LD S       L  +D  G  WRFR+ + 
Sbjct: 119 HMFEKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNDNGLFLNFQDRTGKPWRFRYSYW 177

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGV 249
              + +++  GWS FV  K+L AGD   F R  GE+G+ R+ +
Sbjct: 178 NSSQSYVITKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLFI 220


>gi|297817532|ref|XP_002876649.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322487|gb|EFH52908.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 304

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE---LAAKDLHGNEWRFRH 205
           H F K +T SD        + ++HA+   P LD S      +   L  +D  GN WRFR+
Sbjct: 21  HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDNNKGLLLNFEDRSGNSWRFRY 79

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVRR 251
            +    + +++  GWS FV  K+L AGD   F R  G   +L +  RR
Sbjct: 80  SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSGNKDKLYIDWRR 127


>gi|304307997|gb|ADL70311.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 221

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|304307999|gb|ADL70312.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 220

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|304307983|gb|ADL70304.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 219

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PRPKRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|222623484|gb|EEE57616.1| hypothetical protein OsJ_08008 [Oryza sativa Japonica Group]
          Length = 140

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 34/65 (52%), Gaps = 7/65 (10%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVE------ASTNQVADQQMPVY-DLP 96
            L  ELWHAC+ PLV +P  G RV YFPQGH EQV        S     + Q P +  LP
Sbjct: 26  CLNLELWHACSSPLVCLPSVGTRVVYFPQGHSEQVSWLSAMGCSLLSRGNHQRPWWIALP 85

Query: 97  SKILC 101
           S   C
Sbjct: 86  SSCWC 90


>gi|222066052|emb|CAX21481.1| ARF8 protein [Olea europaea]
          Length = 56

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/53 (50%), Positives = 41/53 (77%)

Query: 259 VPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI 311
           +PSSV+SS SMH+G+LA A HA +T + F ++Y PR SPSEF++P  +Y +++
Sbjct: 1   MPSSVLSSDSMHIGLLAAAAHAAATNSRFCIFYNPRASPSEFVIPLAKYAKAL 53


>gi|357114324|ref|XP_003558950.1| PREDICTED: B3 domain-containing protein Os03g0120900-like
           [Brachypodium distachyon]
          Length = 311

 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 19/131 (14%)

Query: 125 PESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSR 184
           P S  D+  VEKE           H F K +T SD        + ++HA++  P LD + 
Sbjct: 22  PSSTTDQVQVEKE-----------HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSTT 69

Query: 185 QPPTQELAA-------KDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIF 237
                           +D  G  WRFR+ +    + +++  GWS FV  KRL AGD   F
Sbjct: 70  AAAASTGGGGGLLLSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSF 129

Query: 238 LRGENGELRVG 248
            RG   E   G
Sbjct: 130 GRGVGSEAAKG 140


>gi|413953014|gb|AFW85663.1| hypothetical protein ZEAMMB73_672927 [Zea mays]
          Length = 341

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 44  ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQ 77
           AL+ ELW ACAG L  VP  G++VYY PQGHIEQ
Sbjct: 278 ALFVELWKACAGLLSCVPPLGQKVYYLPQGHIEQ 311


>gi|115465275|ref|NP_001056237.1| Os05g0549800 [Oryza sativa Japonica Group]
 gi|122249209|sp|Q6L4H4.1|Y5498_ORYSJ RecName: Full=AP2/ERF and B3 domain-containing protein Os05g0549800
 gi|47900526|gb|AAT39261.1| putative AP2 domain protein [Oryza sativa Japonica Group]
 gi|113579788|dbj|BAF18151.1| Os05g0549800 [Oryza sativa Japonica Group]
          Length = 394

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 34/173 (19%)

Query: 109 KAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP---------PRFHVHSFCKTLTASD 159
           +++ +  ++  + T L E  Q++ A     PPPP               H F KT+T SD
Sbjct: 142 RSKAEVVDMLRKHTYLEELTQNKRAFAAISPPPPKHPASSPTSSSAAREHLFDKTVTPSD 201

Query: 160 TSTHGGFSVLRRHADECLPPLDMSRQPPTQE--------------------LAAKDLHGN 199
                   + ++HA++  P   +   PPT                      L  +D  G 
Sbjct: 202 VGKLNRLVIPKQHAEKHFP---LQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGK 258

Query: 200 EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVR 250
            W+FR+ +    + ++L  GWS FV  K L AGDA  F R  G+N +L +  +
Sbjct: 259 VWKFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRAAGKNAQLFIDCK 311


>gi|356504205|ref|XP_003520889.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 420

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K  T SD        + ++HA++  P LD S       L  +D +G  WRFR+ + 
Sbjct: 86  HMFEKVATPSDVGKLNRLVIPKQHAEKYFP-LDSSTNEKGLLLNFEDRNGKVWRFRYSYW 144

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + +++  GWS FV  K+L AGD   F RG
Sbjct: 145 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 176


>gi|115447949|ref|NP_001047754.1| Os02g0683500 [Oryza sativa Japonica Group]
 gi|75122233|sp|Q6EU30.1|Y2835_ORYSJ RecName: Full=B3 domain-containing protein Os02g0683500
 gi|50251902|dbj|BAD27840.1| RAV-like B3 domain DNA binding protein-like [Oryza sativa Japonica
           Group]
 gi|113537285|dbj|BAF09668.1| Os02g0683500 [Oryza sativa Japonica Group]
 gi|215766728|dbj|BAG98956.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 412

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 1/96 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + +++A++  P LD +       L  +D  G  WRFR+ + 
Sbjct: 94  HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRYSYW 152

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 244
              + +++  GWS FV  KRL AGD   F RG   E
Sbjct: 153 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDE 188


>gi|125540696|gb|EAY87091.1| hypothetical protein OsI_08488 [Oryza sativa Indica Group]
          Length = 411

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 1/96 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + +++A++  P LD +       L  +D  G  WRFR+ + 
Sbjct: 93  HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRYSYW 151

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 244
              + +++  GWS FV  KRL AGD   F RG   E
Sbjct: 152 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDE 187


>gi|58982624|gb|AAW83473.1| RAV transcription factor [Capsicum annuum]
          Length = 399

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + ++HA++  P L          L  +DL+G  WRFR+ +   
Sbjct: 213 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNNSKGVLLNFEDLNGKVWRFRYSYWNS 271

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV 249
            + ++L  GWS FV  K L AGD   F R  +G+ ++ +
Sbjct: 272 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYI 310


>gi|356571279|ref|XP_003553806.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 413

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + ++HA++  P LD S       L  +D +G  WRFR+ +   
Sbjct: 90  FEKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKVWRFRYSYWNS 148

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
            + +++  GWS FV  K+L AGD   F RG
Sbjct: 149 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 178


>gi|147782990|emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
          Length = 364

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F KT+T SD        + ++HA++  P L          L  +D+ G  WRFR+ +   
Sbjct: 191 FEKTVTPSDVGKLNRLVIPKQHAEKHFP-LQTGTTSKGVLLNFEDMGGKVWRFRYSYWNS 249

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV 249
            + ++L  GWS FV  K L AGD   F R   G+ ++ +
Sbjct: 250 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYI 288


>gi|33320073|gb|AAQ05799.1|AF478458_1 DNA binding protein Rav [Capsicum annuum]
          Length = 386

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + ++HA++  P L          L  +DL+G  WRFR+ +   
Sbjct: 200 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNNSKGVLLNFEDLNGKVWRFRYSYWNS 258

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV 249
            + ++L  GWS FV  K L AGD   F R  +G+ ++ +
Sbjct: 259 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYI 297


>gi|255566851|ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
 gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1, putative [Ricinus communis]
          Length = 371

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + ++HA++  P    S       L  +D+ G  WRFR+ +   
Sbjct: 204 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSNSTKGVLLNFEDITGKVWRFRYSYWNS 263

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            + ++L  GWS FV  K L AGD   FL+
Sbjct: 264 SQSYVLTKGWSRFVKEKNLKAGDIVRFLK 292


>gi|225423895|ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 358

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F KT+T SD        + ++HA++  P L          L  +D+ G  WRFR+ +   
Sbjct: 191 FEKTVTPSDVGKLNRLVIPKQHAEKHFP-LQTGTTSKGVLLNFEDMGGKVWRFRYSYWNS 249

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV 249
            + ++L  GWS FV  K L AGD   F R   G+ ++ +
Sbjct: 250 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGDKQLYI 288


>gi|359482026|ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g36080-like [Vitis
           vinifera]
          Length = 346

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 4/134 (2%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K LT SD        + ++HA++  P L          L+ +D  G  WRFR+ +   
Sbjct: 109 FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWNS 167

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV---RRAMRQQGNVPSSVISSH 267
            + ++L  GWS FV  KRL AGD  +F R  +   R  +   RRA   Q N  ++   + 
Sbjct: 168 SQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAAAPPVAV 227

Query: 268 SMHLGVLATAWHAV 281
             + G  +  W  V
Sbjct: 228 HTNTGNTSVGWTRV 241


>gi|449457654|ref|XP_004146563.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Cucumis sativus]
          Length = 345

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + ++HA++  P LD S       L  +D  G  WRFR+ + 
Sbjct: 65  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRCGKLWRFRYSYW 123

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
              + +++  GWS FV  KRL AGD   F R
Sbjct: 124 TSSQSYVMTKGWSRFVKDKRLDAGDIVSFQR 154


>gi|326488105|dbj|BAJ89891.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 980

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 23/166 (13%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF--R 208
           F K L+ASD    G   + +  A+   PP+    QP  + L  +D  G EW F+  F   
Sbjct: 396 FEKVLSASDAGRIGRLVLPKACAEAYFPPIS---QPEGRPLTIQDAKGKEWHFQFRFWPN 452

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE-NGELRVGVRRAMRQQGNVPSSVISSH 267
              R ++L+ G +  + S +L AGD   F R E  G+L +G R+A     N+P S IS  
Sbjct: 453 NNSRMYVLE-GVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKATNTV-NLPDSQIS-- 508

Query: 268 SMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVP-YDQYMESIK 312
                       A++TG++    +   T+ +  IV  Y  +++S+K
Sbjct: 509 ------------AIATGSLLGDSFFSNTNENLSIVSGYSGFLQSVK 542


>gi|296084302|emb|CBI24690.3| unnamed protein product [Vitis vinifera]
          Length = 184

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 31/54 (57%), Gaps = 5/54 (9%)

Query: 349 RWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPP-----ALNSLPMPRPK 397
           RW   KWR LKVRWDETS I   ERV  W I  AL P      ALN LP+ R +
Sbjct: 72  RWFGPKWRYLKVRWDETSYILHLERVPFWNIGVALTPLALTLFALNLLPVSRYR 125



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%)

Query: 244 ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPR 294
           +L     +  RQ  N PSSVISSHSMH GV AT W+A+S   +F  ++ P+
Sbjct: 27  DLSASTDKKWRQLSNDPSSVISSHSMHSGVHATTWYAISVDEIFIRWFGPK 77


>gi|194475604|gb|ACF74549.1| RAV [Nicotiana tabacum]
          Length = 385

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + ++HA++  P L          L  +DL+G  WRFR+ +   
Sbjct: 198 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNTSKGVLLNFEDLNGKVWRFRYSYWNS 256

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVGVR 250
            + ++L  GWS FV  K L AGD   F R  GE+ +L +  +
Sbjct: 257 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGEDKQLYIDFK 298


>gi|356537126|ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 337

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 4/120 (3%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL--AAKDLHGNEWRFRHIFR 208
           F K LT SD        + ++HA++  P    S     + L  + +D  G  WRFR+ + 
Sbjct: 73  FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSYW 132

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG--ENGELRVGVRRAMRQQGNVPSSVISS 266
              + ++L  GWS +V  KRL AGD  +F R   +   L +G RR  +    +P + +SS
Sbjct: 133 NSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVSS 192


>gi|357160833|ref|XP_003578891.1| PREDICTED: B3 domain-containing protein Os11g0156000-like
           [Brachypodium distachyon]
          Length = 273

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL--AAKDLHGNEWRFRHI 206
           H F K LT SD        + ++HA+   P L+    P  ++L  + +D  G  WRFR+ 
Sbjct: 34  HLFEKPLTPSDVGKLNRLVIPKQHAERYFP-LNGGDSPGEKDLLLSFEDEAGKPWRFRYS 92

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR----GENGELRVGVRR 251
           +    + ++L  GWS +V  K L AGD   F R    G    L +G RR
Sbjct: 93  YWTSSQSYVLTKGWSRYVKEKHLDAGDVVHFDRVRGLGTGDRLFIGCRR 141


>gi|413948352|gb|AFW81001.1| putative AP2/EREBP transcription factor superfamily protein [Zea
           mays]
          Length = 375

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLP--PLDMSRQPPTQELAAKDLHGNEWRFRHI 206
           H F KT+T SD        + ++HA+   P   +   R P    L+ +D  G  WRFR+ 
Sbjct: 204 HLFDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGGRAPI---LSFEDAAGKAWRFRYS 260

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           +    + ++L  GWS FV  K L AGDA  F R
Sbjct: 261 YWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYR 293


>gi|15228649|ref|NP_191756.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
           thaliana]
 gi|75182616|sp|Q9M268.1|NGA2_ARATH RecName: Full=B3 domain-containing transcription factor NGA2;
           AltName: Full=Protein NGATHA 2
 gi|6899895|emb|CAB71904.1| RAV-like protein [Arabidopsis thaliana]
 gi|108385265|gb|ABF85768.1| At3g61970 [Arabidopsis thaliana]
 gi|227060687|gb|ACP18972.1| NGATHA2 [Arabidopsis thaliana]
 gi|332646767|gb|AEE80288.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
           thaliana]
          Length = 299

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE---LAAKDLHGNEWRFRH 205
           H F K +T SD        + ++HA+   P LD S    + +   L  +D  GN WRFR+
Sbjct: 21  HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRY 79

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            +    + +++  GWS FV  K+L AGD   F R
Sbjct: 80  SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113


>gi|255579355|ref|XP_002530522.1| transcription factor, putative [Ricinus communis]
 gi|223529926|gb|EEF31854.1| transcription factor, putative [Ricinus communis]
          Length = 373

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 3/133 (2%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K LT SD        + ++HA++  P L          L+ +D  G  WRFR+ +   
Sbjct: 137 FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSVDKGLLLSFEDELGKCWRFRYSYWNS 195

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE-NGE-LRVGVRRAMRQQGNVPSSVISSHS 268
            + ++L  GWS +V  K+L AGD  +F R   +GE L +G RR      N  S   SS  
Sbjct: 196 SQSYVLTKGWSRYVKDKQLDAGDVVLFERHRLDGERLFIGWRRRDNNHTNTSSCSSSSGV 255

Query: 269 MHLGVLATAWHAV 281
           M  G     W  V
Sbjct: 256 MVQGSSGGVWSRV 268


>gi|26450371|dbj|BAC42301.1| putative RAV [Arabidopsis thaliana]
          Length = 299

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE---LAAKDLHGNEWRFRH 205
           H F K +T SD        + ++HA+   P LD S    + +   L  +D  GN WRFR+
Sbjct: 21  HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRY 79

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            +    + +++  GWS FV  K+L AGD   F R
Sbjct: 80  SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113


>gi|449466693|ref|XP_004151060.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           RAV1-like [Cucumis sativus]
          Length = 317

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F KT+T SD        + ++HA++  P  +         L  +D+ G  WRFR+ +   
Sbjct: 168 FEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNS 227

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            + ++L  GWS FV    L AGD   FLR
Sbjct: 228 SQSYVLTKGWSRFVKDNTLRAGDVVRFLR 256


>gi|225451964|ref|XP_002279732.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 284

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           E  P    R  V  F K +T SD        + ++HA++ LP L ++       L  +D 
Sbjct: 142 ESKPSVCER--VQLFDKAVTPSDVGKLNRMVIPKQHAEKHLP-LQLASSSKGGLLNFEDN 198

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 256
            G  WRFR+ F    + ++L  GW  FV  K L AGD   F R    + R+ +    R  
Sbjct: 199 GGKIWRFRYSFWNSSQSYVLTKGWRRFVKEKNLKAGDIVSFHRSTGSDKRLFIEWEQRDS 258

Query: 257 GNVPS 261
              PS
Sbjct: 259 SRKPS 263


>gi|449526628|ref|XP_004170315.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           RAV1-like, partial [Cucumis sativus]
          Length = 311

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F KT+T SD        + ++HA++  P  +         L  +D+ G  WRFR+ +   
Sbjct: 162 FEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNS 221

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            + ++L  GWS FV    L AGD   FLR
Sbjct: 222 SQSYVLTKGWSRFVKDNTLRAGDVVRFLR 250


>gi|297740162|emb|CBI30344.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K LT SD        + ++HA++  P L          L+ +D  G  WRFR+ +   
Sbjct: 2   FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWNS 60

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELR--VGVRR 251
            + ++L  GWS FV  KRL AGD  +F R  +   R  +G RR
Sbjct: 61  SQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRR 103


>gi|388501264|gb|AFK38698.1| unknown [Medicago truncatula]
          Length = 302

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 155 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRH 214
           LT SD        + ++HA+   P LD S +     L+ +D  G  WRFR+ +    + +
Sbjct: 65  LTPSDVGKLNRLVIPKQHAERYFP-LD-SEEIKGLLLSFEDESGKCWRFRYSYWNSSQSY 122

Query: 215 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN 258
           +L  GWS +V  KRL AGD  +F R      R+ + R  R   N
Sbjct: 123 VLTKGWSRYVKDKRLDAGDVVLFQRHRIHPQRLFISRRRRHGSN 166


>gi|304307991|gb|ADL70308.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 234

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 360 VRWDETSTIPRPERVSLWKIEPALAPPALNSLPMPRPKRPRSNMLPSSPDSSVLTREGSS 419
           VRWDE+      ERVS W+I+P+++ P L+    PR KRP + +L ++P  + +T+ G  
Sbjct: 1   VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRHKRPWAGLLDTTPPGNPITKRGGF 60

Query: 420 KLNVDPSSATGFSRVLQGQE 439
              +D   +   S+VLQGQE
Sbjct: 61  ---LDFEESVRPSKVLQGQE 77


>gi|218186464|gb|EEC68891.1| hypothetical protein OsI_37536 [Oryza sativa Indica Group]
          Length = 273

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 4/105 (3%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K LT SD        + ++HA+   P            L+ +D  G  WRFR+ +   
Sbjct: 36  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGGGDSGEKGLLLSFEDESGKPWRFRYSYWTS 95

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR----GENGELRVGVRR 251
            + ++L  GWS +V  KRL AGD   F R    G    L +G RR
Sbjct: 96  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGLGAADRLFIGCRR 140


>gi|242080967|ref|XP_002445252.1| hypothetical protein SORBIDRAFT_07g006880 [Sorghum bicolor]
 gi|241941602|gb|EES14747.1| hypothetical protein SORBIDRAFT_07g006880 [Sorghum bicolor]
          Length = 279

 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE--LAAKDLH-GNEWRFRH 205
           + F K LTASD        + R+ A+EC P +  ++     E  L  +D+  G  W FR 
Sbjct: 77  YLFSKILTASDVGKLNRLLIPRQCAEECFPKISKTKSAEDDEDFLNFEDMSTGLIWCFRF 136

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
                 + ++L  GW  F+  K L  GD   F RG
Sbjct: 137 CLWNNSKTYVLTKGWHFFIKEKNLKKGDVLSFYRG 171


>gi|21618252|gb|AAM67302.1| RAV-like protein [Arabidopsis thaliana]
          Length = 283

 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE---LAAKDLHGNEWRFRH 205
           H F K +T SD        + ++HA+   P LD S    + +   L  +D  GN WRFR+
Sbjct: 5   HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRY 63

Query: 206 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            +    + +++  GWS FV  K+L AGD   F R
Sbjct: 64  SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 97


>gi|56966891|pdb|1WID|A Chain A, Solution Structure Of The B3 Dna-Binding Domain Of Rav1
          Length = 130

 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + + HA++  P    +       L  +D++G  WRFR+ +   
Sbjct: 14  FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 73

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVG 248
            + ++L  GWS FV  K L AGD   F R  G++ +L +G
Sbjct: 74  SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 113


>gi|326507492|dbj|BAK03139.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 414

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 6/126 (4%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLP---PLDMSRQPPTQE---LAAKDLHGNEWR 202
           H F KT+T SD        + ++HA++  P   P   +  P   +   L   D  G  WR
Sbjct: 194 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSASAAVPGECKGVLLNFDDATGKVWR 253

Query: 203 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 262
           FR+ +    + ++L  GWS FV  K L AGDA  F R  +G  ++ +   +R +    ++
Sbjct: 254 FRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVEFYRAASGNNQLFIDCKLRSKSTTTTT 313

Query: 263 VISSHS 268
            ++S +
Sbjct: 314 SVNSEA 319


>gi|356498733|ref|XP_003518204.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 344

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 5/121 (4%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPL---DMSRQPPTQELAAKDLHGNEWRFRHIF 207
           F K LT SD        + ++HA++  P       S +     L+ +D  G  WRFR+ +
Sbjct: 75  FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGGDSGSSECKGLLLSFEDESGKCWRFRYSY 134

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRAMRQQGNVPSSVIS 265
               + ++L  GWS +V  KRL AGD  +F   R +   L +G RR  +     P + +S
Sbjct: 135 WNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQRLFIGWRRRRQSDALPPPAHVS 194

Query: 266 S 266
           S
Sbjct: 195 S 195


>gi|297844230|ref|XP_002889996.1| hypothetical protein ARALYDRAFT_888685 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335838|gb|EFH66255.1| hypothetical protein ARALYDRAFT_888685 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 344

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + + HA++  P    +       L  +D++G  WRFR+ +   
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVG 248
            + ++L  GWS FV  K L AGD   F R  G++ +L +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287


>gi|15222217|ref|NP_172784.1| AP2/ERF and B3 domain-containing transcription factor RAV1
           [Arabidopsis thaliana]
 gi|25091118|sp|Q9ZWM9.1|RAV1_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription factor
           RAV1; AltName: Full=Ethylene-responsive transcription
           factor RAV1; AltName: Full=Protein RELATED TO ABI3/VP1 1
 gi|9958065|gb|AAG09554.1|AC011810_13 DNA binding protein RAV1 [Arabidopsis thaliana]
 gi|3868857|dbj|BAA34250.1| RAV1 [Arabidopsis thaliana]
 gi|17380762|gb|AAL36211.1| putative DNA-binding protein RAV1 [Arabidopsis thaliana]
 gi|20259029|gb|AAM14230.1| putative DNA-binding protein RAV1 [Arabidopsis thaliana]
 gi|332190870|gb|AEE28991.1| AP2/ERF and B3 domain-containing transcription factor RAV1
           [Arabidopsis thaliana]
          Length = 344

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + + HA++  P    +       L  +D++G  WRFR+ +   
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVG 248
            + ++L  GWS FV  K L AGD   F R  G++ +L +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287


>gi|297814780|ref|XP_002875273.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321111|gb|EFH51532.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE---LAAKDLHGNEWRFRHIF 207
           F KT+T SD        V+ +H  E   PL +     + +   L  +D++G  WRFR+ +
Sbjct: 180 FEKTVTPSDVGKLNRL-VIPKHQAEKHFPLPLGNNNVSVKGILLNFEDVNGKVWRFRYSY 238

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVG 248
               + ++L  GWS FV  KRL AGD   F R  G++ +L +G
Sbjct: 239 WNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNGQDQKLFIG 281


>gi|304308205|gb|ADL70415.1| truncated auxin response factor 13 [Arabidopsis thaliana]
          Length = 59

 Score = 52.0 bits (123), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 29/87 (33%)

Query: 269 MHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGE 328
           M  GV+A+  +A  T  MF V YKPR                            M+FEG+
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGK 33

Query: 329 EAPEQRFTGTIVGIEDADPQRWRDSKW 355
           +  E+++ GTI+G+ D  P  W+DS+W
Sbjct: 34  DFSEKKYDGTIIGVNDMSPH-WKDSEW 59


>gi|302755248|ref|XP_002961048.1| hypothetical protein SELMODRAFT_71153 [Selaginella moellendorffii]
 gi|302767090|ref|XP_002966965.1| hypothetical protein SELMODRAFT_66538 [Selaginella moellendorffii]
 gi|300164956|gb|EFJ31564.1| hypothetical protein SELMODRAFT_66538 [Selaginella moellendorffii]
 gi|300171987|gb|EFJ38587.1| hypothetical protein SELMODRAFT_71153 [Selaginella moellendorffii]
          Length = 238

 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFR 208
           H F K +T SD        + + HA+ C P   ++       L+ +D  G  WRFR+ + 
Sbjct: 131 HLFFKVVTPSDVGKLNRLVIPKHHAERCFP---LAPHEKGLLLSFEDERGKHWRFRYSYW 187

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 240
              + ++L  GWS FV  K+L  GDA  F R 
Sbjct: 188 SSSQSYVLTRGWSRFVKDKQLQVGDAVFFDRA 219


>gi|125578564|gb|EAZ19710.1| hypothetical protein OsJ_35286 [Oryza sativa Japonica Group]
          Length = 173

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 4/105 (3%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K LT SD        + ++HA+   P            L+ +D  G  WRFR+ +   
Sbjct: 36  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGGGDSGEKGLLLSFEDESGKPWRFRYSYWTS 95

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR----GENGELRVGVRR 251
            + ++L  GWS +V  KRL AGD   F R    G    L +G RR
Sbjct: 96  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGLGAADRLFIGCRR 140


>gi|75246443|sp|Q8LNN8.1|Y1071_ORYSJ RecName: Full=Putative B3 domain-containing protein Os10g0537100
 gi|21717164|gb|AAM76357.1|AC074196_15 putative DNA-binding protein [Oryza sativa Japonica Group]
 gi|31433278|gb|AAP54816.1| B3 DNA binding domain containing protein [Oryza sativa Japonica
           Group]
          Length = 312

 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 18/127 (14%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE-------------LAAKD 195
           H F K +T SD        + ++HA+   P LD +                    L+ +D
Sbjct: 33  HMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAAGAGGGGGGGGGGGGGKGLVLSFED 91

Query: 196 LHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG----ENGELRVGVRR 251
             G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG      G L +  RR
Sbjct: 92  RTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVSFGRGLGDAARGRLFIDFRR 151

Query: 252 AMRQQGN 258
             +  G+
Sbjct: 152 RRQDAGS 158


>gi|356495986|ref|XP_003516851.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Glycine max]
          Length = 384

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 7/96 (7%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAK-------DLHGNEWRF 203
           F K +T SD        + ++HA++  P    +        AAK       D+ G  WRF
Sbjct: 205 FQKAVTPSDVGKLNRLVIPKQHAEKHFPLQSAANGVSATATAAKGVLLNFEDVGGKVWRF 264

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           R+ +    + ++L  GWS FV  K L AGD   F R
Sbjct: 265 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFQR 300


>gi|383932346|gb|AFH57270.1| RAV [Gossypium hirsutum]
          Length = 357

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + ++HA++  P    S       L  +D+ G  WRFR+ +   
Sbjct: 193 FEKAVTPSDVGKLNRLVIPKQHAEKYFPLQSGSASSKGVLLNFEDVTGKVWRFRYSYWNS 252

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            + ++L  GWS FV  K L AGD   F R
Sbjct: 253 SQSYVLIKGWSRFVKEKNLKAGDIVSFQR 281


>gi|115484261|ref|NP_001065792.1| Os11g0156000 [Oryza sativa Japonica Group]
 gi|75270015|sp|Q53QI0.1|Y1160_ORYSJ RecName: Full=B3 domain-containing protein Os11g0156000
 gi|62701645|gb|AAX92718.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
 gi|108864011|gb|ABA91538.2| B3 DNA binding domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113644496|dbj|BAF27637.1| Os11g0156000 [Oryza sativa Japonica Group]
 gi|215697789|dbj|BAG91982.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 279

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K LT SD        + ++HA+   P            L+ +D  G  WRFR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIF--LRGENG---ELRVGVRR 251
            + ++L  GWS +V  KRL AGD   F  +RG  G    L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|125532782|gb|EAY79347.1| hypothetical protein OsI_34476 [Oryza sativa Indica Group]
          Length = 312

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 18/127 (14%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE-------------LAAKD 195
           H F K +T SD        + ++HA+   P LD +                    L+ +D
Sbjct: 33  HMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAAGAGGGGGGGGGGGGGKGLVLSFED 91

Query: 196 LHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG----ENGELRVGVRR 251
             G  WRFR+ +    + +++  GWS FV  KRL AGD   F RG      G L +  RR
Sbjct: 92  RTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVSFGRGLGDAARGRLFIDFRR 151

Query: 252 AMRQQGN 258
             +  G+
Sbjct: 152 RRQDAGS 158


>gi|312282591|dbj|BAJ34161.1| unnamed protein product [Thellungiella halophila]
          Length = 340

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + + HA++  P    +       L  +D+ G  WRFR+ +   
Sbjct: 184 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVTGKVWRFRYSYWNS 243

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVG 248
            + ++L  GWS FV  K L AGD   F R  G++ +L +G
Sbjct: 244 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSDGQDQQLYIG 283


>gi|357127299|ref|XP_003565320.1| PREDICTED: putative AP2/ERF and B3 domain-containing protein
           Os01g0140700-like [Brachypodium distachyon]
          Length = 312

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 41/87 (47%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        V ++HA+   P  + +       L  +D  G  WRFR+ +   
Sbjct: 164 FEKAVTPSDVGKLNRLVVPKQHAERHFPEPEKTTGSKGVLLNFEDGEGKVWRFRYSYWNS 223

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIF 237
            + ++L  GWS FV  K L AGD  +F
Sbjct: 224 SQSYVLTKGWSRFVREKGLAAGDTIVF 250


>gi|253560642|gb|ACT33043.1| RAV transcription factor [Camellia sinensis]
          Length = 362

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K +T SD        + ++HA++  P L          L  KD+ G  WRFR+ +   
Sbjct: 202 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSETTSKGVLLNFKDVAGKVWRFRYSYWNS 260

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            + ++L  GWS FV  K L AGD   F R
Sbjct: 261 SQSYVLTKGWSRFVKEKSLKAGDIVSFYR 289


>gi|218200262|gb|EEC82689.1| hypothetical protein OsI_27346 [Oryza sativa Indica Group]
          Length = 947

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 14/229 (6%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF--R 208
           F K L+ASD    G   + +  A+   PP+    QP  + L  +D  G EW F+  F   
Sbjct: 363 FEKVLSASDAGRIGRLVLPKACAEAYFPPIS---QPEGRPLTIQDAKGKEWHFQFRFWPN 419

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE-NGELRVGVRRAMRQQGNVPSSVIS-- 265
              R ++L+ G +  + S +L AGD   F R E  G+L +G R+A     ++P S IS  
Sbjct: 420 NNSRMYVLE-GVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKATNTV-SLPDSQISAI 477

Query: 266 SHSMHLG--VLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKM 323
           ++   LG  + ++    ++  + ++ +++     ++    YD ++ S   + S     K 
Sbjct: 478 ANGSILGDTLFSSTNENLAIVSGYSGFFQSIKGGADTSSIYDHHVNSADGDVSWLKTDKF 537

Query: 324 RFEGEEAPEQRFT-GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRP 371
               +E   Q    G  +G +        +  W  LK+ WDE   + RP
Sbjct: 538 GSRPDEGSLQFLKRGRNIGSKSRRLSMDAEEAWE-LKLYWDEVQELLRP 585


>gi|218185277|gb|EEC67704.1| hypothetical protein OsI_35175 [Oryza sativa Indica Group]
          Length = 363

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K LT SD        + ++HA+   P            L+ +D  G  WRFR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIF--LRGENG---ELRVGVRR 251
            + ++L  GWS +V  KRL AGD   F  +RG  G    L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|124359420|gb|ABN05873.1| Auxin response factor [Medicago truncatula]
          Length = 98

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 279 HAVSTGTM---FTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QR 334
            AV  GT    F V Y PR+   EF V       +++  +  GMRFKM  E E++     
Sbjct: 14  EAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGITLQIRWCPGMRFKMPIETEDSSRISW 73

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKV 360
           F GT+  ++ ADP  W DS WR L+V
Sbjct: 74  FIGTVASVQAADPS-WPDSLWRLLQV 98


>gi|226497110|ref|NP_001141742.1| uncharacterized protein LOC100273875 [Zea mays]
 gi|194705766|gb|ACF86967.1| unknown [Zea mays]
 gi|413946369|gb|AFW79018.1| putative AP2/EREBP transcription factor superfamily protein [Zea
           mays]
          Length = 406

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 9/115 (7%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADE----CLPPLDMSRQPPTQE-----LAAKDLHGN 199
           H F KT+T SD        + ++HA++     LP    +      E     L  +D  G 
Sbjct: 204 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPAAAAAGVGSGGECKGVLLNFEDAAGK 263

Query: 200 EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
            WRFR+ +    + ++L  GWS FV  K L AGDA  F R   G+ ++ +   +R
Sbjct: 264 AWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAGGKQQLFIDCKLR 318


>gi|164458454|gb|ABY57634.1| RAV1 [Solanum lycopersicum]
          Length = 372

 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPL-DMSRQPPTQE---LAAKDLHGNEWRFRHI 206
           F K +T SD        + ++HA+   P +  +++   T +   L  +D++G  WRFR+ 
Sbjct: 203 FEKVVTPSDVGKLNRLVIPKQHAERYFPLVAKVNKNDNTSKGVLLNFEDMNGKMWRFRYS 262

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGEL 245
           +    + ++L  GWS +V  K+L AGD   F R    E+
Sbjct: 263 YWNSSQSYVLTKGWSRYVKEKKLKAGDIVSFKRCSGVEI 301


>gi|30686669|ref|NP_850260.1| B3 domain-containing protein [Arabidopsis thaliana]
 gi|75151444|sp|Q8GYJ2.1|Y2608_ARATH RecName: Full=B3 domain-containing protein At2g36080; AltName:
           Full=Protein AUXIN RESPONSIVE FACTOR 31
 gi|26450255|dbj|BAC42244.1| putative RAV2-like DNA binding protein [Arabidopsis thaliana]
 gi|330254110|gb|AEC09204.1| B3 domain-containing protein [Arabidopsis thaliana]
          Length = 244

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE---LAAKDLHGNEWRFRHIF 207
           F K LT SD        + ++HA+   P L  +     ++   L  +D  G  WRFR+ +
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIF--LRGENGELRVGVRR 251
               + ++L  GWS +V  K L AGD  +F   R + G   +G RR
Sbjct: 97  WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142


>gi|449439577|ref|XP_004137562.1| PREDICTED: B3 domain-containing protein Os07g0679700-like [Cucumis
           sativus]
          Length = 1195

 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 20/146 (13%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIF--R 208
           F K L+ASD    G   + +  A+   PP+  S   P +    +D+ GNEW F+  F   
Sbjct: 665 FEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPVK---VQDVKGNEWTFQFRFWPN 721

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE-NGELRVGVRRAMR----QQGNVPSSV 263
              R ++L+ G +  + S +L AGD   F R +  G+L +G R+A      Q   +P+  
Sbjct: 722 NNSRMYVLE-GVTPCIQSMQLRAGDTVTFSRIDPGGQLVMGFRKATNSTDVQDAKIPTLS 780

Query: 264 ISSHSMHLGVLATAWHAVSTGTMFTV 289
             SHS           A  +GT+F V
Sbjct: 781 NGSHS---------GDASFSGTLFVV 797


>gi|326526987|dbj|BAK00882.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 380

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 140 PPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM---SRQPPTQELAAKDL 196
           PP P     H F KT+T SD        + +++A++  P L +     +     L  +D 
Sbjct: 192 PPSPAAVREHLFDKTVTPSDVGKLNRLVIPKQNAEKHFP-LQLPAGGGESKGLLLNFEDD 250

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENG 243
            G  WRFR+ +    + ++L  GWS FV  K L AGD   F R   G
Sbjct: 251 AGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLGAGDVVGFYRSAAG 297


>gi|356576289|ref|XP_003556265.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Glycine max]
          Length = 362

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 10/99 (10%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADE----------CLPPLDMSRQPPTQELAAKDLHGNE 200
           F KT+T SD        + ++HA++           LP +  +       L  +D+ G  
Sbjct: 178 FEKTVTQSDVGKLNRLVIPKQHAEKHFPLSGSGGGALPCMAAAAGAKGMLLNFEDVGGKV 237

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           WRFR+ +    + ++L  GWS FV  K L AGDA  F +
Sbjct: 238 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVQFFK 276


>gi|326518670|dbj|BAJ92496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 308

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE---LAAKDLH 197
           P P       F K +T SD        V ++HA++  PP   +      +   L  +D  
Sbjct: 148 PTPAWAREFLFEKAVTPSDVGKLNRLVVPKQHAEKHFPPTTAAAAGGDGKGLLLNFEDGQ 207

Query: 198 GNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           G  WRFR+ +    + ++L  GWS FV  K L AGD   F R
Sbjct: 208 GKVWRFRYSYWNSSQSYVLTKGWSRFVQEKGLCAGDTVTFSR 249


>gi|393907721|gb|EFO23614.2| hypothetical protein LOAG_04870 [Loa loa]
          Length = 1649

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 280  AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
             V TG +F+V +    +  +FI+    Y ES+   Y  G R ++  +        +TGTI
Sbjct: 930  GVRTGLIFSVKFHDMENVPDFIILRHLYDESVARRYQPGTRIEIILDN-----HWWTGTI 984

Query: 340  VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP 381
               E  D + +  S W CL VRWD        E++S W ++P
Sbjct: 985  DKKEVHDEENYPRSNWYCLTVRWD----TGEDEKMSPWDVQP 1022


>gi|125527343|gb|EAY75457.1| hypothetical protein OsI_03358 [Oryza sativa Indica Group]
          Length = 361

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 9/122 (7%)

Query: 136 KEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE--LAA 193
           + P  P   R H+  F KT+T SD        + ++HA++  P    S    ++   L  
Sbjct: 171 RSPFAPAAARDHL--FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNF 228

Query: 194 KDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR-----GENGELRVG 248
           +D  G  WRFR+ +    + ++L  GWS FV  K L AGD   F R     G++G+L + 
Sbjct: 229 EDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFID 288

Query: 249 VR 250
            +
Sbjct: 289 CK 290


>gi|242058413|ref|XP_002458352.1| hypothetical protein SORBIDRAFT_03g031860 [Sorghum bicolor]
 gi|241930327|gb|EES03472.1| hypothetical protein SORBIDRAFT_03g031860 [Sorghum bicolor]
          Length = 413

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 141 PPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE--LAAKDLHG 198
           P P     H F KT+T SD        + ++HA++  P    S    ++   L  +D  G
Sbjct: 212 PSPATAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNLEDAAG 271

Query: 199 NEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
             WRFR+ +    + ++L  GWS FV  K L AGD   F R
Sbjct: 272 KVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYR 312


>gi|312075524|ref|XP_003140455.1| hypothetical protein LOAG_04870 [Loa loa]
          Length = 1702

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 280  AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
             V TG +F+V +    +  +FI+    Y ES+   Y  G R ++  +        +TGTI
Sbjct: 983  GVRTGLIFSVKFHDMENVPDFIILRHLYDESVARRYQPGTRIEIILDN-----HWWTGTI 1037

Query: 340  VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP 381
               E  D + +  S W CL VRWD        E++S W ++P
Sbjct: 1038 DKKEVHDEENYPRSNWYCLTVRWD----TGEDEKMSPWDVQP 1075


>gi|115439333|ref|NP_001043946.1| Os01g0693400 [Oryza sativa Japonica Group]
 gi|75247719|sp|Q8RZX9.1|Y1934_ORYSJ RecName: Full=AP2/ERF and B3 domain-containing protein Os01g0693400
 gi|18565433|dbj|BAB84620.1| DNA-binding protein RAV1-like [Oryza sativa Japonica Group]
 gi|113533477|dbj|BAF05860.1| Os01g0693400 [Oryza sativa Japonica Group]
 gi|215768937|dbj|BAH01166.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 393

 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 9/122 (7%)

Query: 136 KEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE--LAA 193
           + P  P   R H+  F KT+T SD        + ++HA++  P    S    ++   L  
Sbjct: 203 RSPFAPAAARDHL--FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNF 260

Query: 194 KDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR-----GENGELRVG 248
           +D  G  WRFR+ +    + ++L  GWS FV  K L AGD   F R     G++G+L + 
Sbjct: 261 EDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFID 320

Query: 249 VR 250
            +
Sbjct: 321 CK 322


>gi|62701644|gb|AAX92717.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
 gi|62701878|gb|AAX92951.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
          Length = 313

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQ 210
           F K LT SD        + ++HA+   P            L+ +D  G  WRFR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 211 PRRHLLQSGWSVFVSSKRLVAGDAFIF--LRGENG---ELRVGVRR 251
            + ++L  GWS +V  KRL AGD   F  +RG  G    L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|413955546|gb|AFW88195.1| hypothetical protein ZEAMMB73_856314 [Zea mays]
          Length = 277

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 11/99 (11%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE-----------LAAKDLH 197
           H F K +T SD        + ++HA+   P LD S                  L+ +D  
Sbjct: 30  HMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASSAAAAAAAAAAGGGKGLVLSFEDRA 89

Query: 198 GNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFI 236
           G  WRFR+ +    + +++  GWS FV  KRL AGD  +
Sbjct: 90  GKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVL 128


>gi|170584553|ref|XP_001897063.1| Bromodomain containing protein [Brugia malayi]
 gi|158595548|gb|EDP34092.1| Bromodomain containing protein [Brugia malayi]
          Length = 1664

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 280  AVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTI 339
             V TG +F+V +    +  +FI+    Y ES+   Y  G R ++  +        +TGTI
Sbjct: 961  GVRTGLIFSVKFHDMENVPDFIILRHLYDESVARRYQPGTRIEIILDN-----HWWTGTI 1015

Query: 340  VGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEP 381
               E  D + +  S W CL VRWD        E++S W ++P
Sbjct: 1016 DKKEVHDEENYPRSNWYCLTVRWD----TGEDEKMSPWDVQP 1053


>gi|147835080|emb|CAN61373.1| hypothetical protein VITISV_034843 [Vitis vinifera]
          Length = 246

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 137 EPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDL 196
           E  P    R  V  F K +T SD        + ++HA++ LP L ++       L  +D 
Sbjct: 142 ESKPSVCER--VQLFDKAVTPSDVGKLNRMVIPKQHAEKHLP-LQLASSSKGGLLNFEDN 198

Query: 197 HGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
            G  WRFR+ F    + ++L  GW  FV  K L AGD   F R
Sbjct: 199 GGKIWRFRYSFWNSSQSYVLTKGWRRFVKEKNLKAGDIVSFHR 241


>gi|242088721|ref|XP_002440193.1| hypothetical protein SORBIDRAFT_09g027530 [Sorghum bicolor]
 gi|241945478|gb|EES18623.1| hypothetical protein SORBIDRAFT_09g027530 [Sorghum bicolor]
          Length = 406

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 7/103 (6%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLP-------PLDMSRQPPTQELAAKDLHGNEW 201
           H F KT+T SD        + ++HA++  P          +  +     L  +D  G  W
Sbjct: 213 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPAAAAAVVGGECKGVLLNFEDATGKVW 272

Query: 202 RFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 244
           RFR+ +    + ++L  GWS FV  K L AGDA  F R   G+
Sbjct: 273 RFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAGGK 315


>gi|224111734|ref|XP_002315958.1| AP2 domain-containing transcription factor [Populus trichocarpa]
 gi|222864998|gb|EEF02129.1| AP2 domain-containing transcription factor [Populus trichocarpa]
          Length = 367

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELA-AKDLHGNEWRFRHIFRG 209
           F K +T SD        + ++HA++  P    S       L   +D+ G  WRFR+ +  
Sbjct: 206 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSNSTKGVLLNLEDVSGKVWRFRYSYWN 265

Query: 210 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
             + ++L  GWS FV  K L AGD   F R
Sbjct: 266 SSQSYVLTKGWSRFVKEKNLKAGDIVCFQR 295


>gi|297827087|ref|XP_002881426.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327265|gb|EFH57685.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 236

 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE---LAAKDLHGNEWRFRHIF 207
           F K LT SD        + ++HA+   P L  +     ++   L  +D  G  WRFR+ +
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96

Query: 208 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIF--LRGENGELRVGVRR 251
               + ++L  GWS +V  K L AGD  +F   R   G   +G RR
Sbjct: 97  WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRANGGRFFIGWRR 142


>gi|414880879|tpg|DAA58010.1| TPA: putative AP2/EREBP transcription factor superfamily protein
           [Zea mays]
          Length = 389

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE--LAAKDLHGNEWRFRHI 206
           H F KT+T SD        + ++HA++  P    S    ++   L  +D  G  WRFR+ 
Sbjct: 211 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNLEDAAGKVWRFRYS 270

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENG 243
           +    + ++L  GWS FV  K L AGD   F R   G
Sbjct: 271 YWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAG 307


>gi|304308145|gb|ADL70385.1| auxin response factor10 [Arabidopsis thaliana]
          Length = 290

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PR 395
           GT+  ++ ADP RW +S WR L+V WDE   +   +RVS W +E     P ++  P  PR
Sbjct: 1   GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPR 60

Query: 396 PK 397
            K
Sbjct: 61  KK 62


>gi|351725319|ref|NP_001237600.1| RAV-like DNA-binding protein [Glycine max]
 gi|72140114|gb|AAZ66389.1| RAV-like DNA-binding protein [Glycine max]
          Length = 351

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHA----------DECLPPLDMSRQPPTQELAAKDLHGNE 200
           F KT+T SD        + ++HA          DE  P +  +       L  +D+ G  
Sbjct: 172 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLSGSGDESSPCVAGASAAKGMLLNFEDVGGKV 231

Query: 201 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           WRFR+ +    + ++L  GWS FV  K L AGDA  F +
Sbjct: 232 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVQFFK 270


>gi|356570873|ref|XP_003553608.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 299

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE----LAAKDLHGNEWRFRHI 206
           F K LT SD        + ++HA++  P LD S           L+ +D  G  WRFR+ 
Sbjct: 77  FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LDSSGGDSAAAKGLLLSFEDESGKCWRFRYS 135

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           +    + ++L  GWS +V  KRL AGD  +F R
Sbjct: 136 YWNSSQSYVLTKGWSRYVKDKRLHAGDVVLFHR 168


>gi|304308143|gb|ADL70384.1| auxin response factor10 [Arabidopsis thaliana]
          Length = 290

 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PR 395
           GT+  ++ ADP RW +S WR L+V WDE   +   +RVS W +E     P ++  P  PR
Sbjct: 1   GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPR 60

Query: 396 PK 397
            K
Sbjct: 61  KK 62


>gi|298112027|gb|ADB96370.2| auxin response factor 10 [Arabidopsis thaliana]
 gi|304308131|gb|ADL70378.1| auxin response factor10 [Arabidopsis thaliana]
 gi|304308133|gb|ADL70379.1| auxin response factor10 [Arabidopsis thaliana]
 gi|304308135|gb|ADL70380.1| auxin response factor10 [Arabidopsis thaliana]
 gi|304308149|gb|ADL70387.1| auxin response factor10 [Arabidopsis thaliana]
 gi|304308153|gb|ADL70389.1| auxin response factor10 [Arabidopsis thaliana]
          Length = 290

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PR 395
           GT+  ++ ADP RW +S WR L+V WDE   +   +RVS W +E     P ++  P  PR
Sbjct: 1   GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPR 60

Query: 396 PK 397
            K
Sbjct: 61  KK 62


>gi|224099325|ref|XP_002311438.1| AP2 domain-containing transcription factor [Populus trichocarpa]
 gi|222851258|gb|EEE88805.1| AP2 domain-containing transcription factor [Populus trichocarpa]
          Length = 369

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE--LAAKDLHGNEWRFRHIFR 208
           F K +T SD        + ++HA++  P L  +    T+   L  +D+ G  WRFR+ + 
Sbjct: 205 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSTSSCSTKGVLLNLEDMSGKVWRFRYSYW 263

Query: 209 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
              + ++L  GWS FV  K L AGD   F R
Sbjct: 264 NSSQSYVLTKGWSRFVKEKSLKAGDIVCFQR 294


>gi|297845604|ref|XP_002890683.1| hypothetical protein ARALYDRAFT_890147 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336525|gb|EFH66942.1| hypothetical protein ARALYDRAFT_890147 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 151 FCKTLTASDTSTHGGFSVLRRHADECLP------PLDMSRQPPTQELA-AKDLHGNEWRF 203
           F KT+T SD        + ++HA++  P       + MS  P    L   +D  G  WRF
Sbjct: 192 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPATTTAMGMSPSPTKGVLINLEDRTGKVWRF 251

Query: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 239
           R+ +    + ++L  GWS FV  K L AGD   F R
Sbjct: 252 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFER 287


>gi|298113106|gb|ADB96384.2| auxin response factor 16 [Arabidopsis thaliana]
          Length = 274

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 26/103 (25%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE----------PALA 384
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E           + +
Sbjct: 3   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 62

Query: 385 PP--------------ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           PP               +NS+P+  P  P + ++ SSP SSVL
Sbjct: 63  PPRKKMRLPQHPDYNNLINSIPV--PSFPSNPLIRSSPLSSVL 103


>gi|226500200|ref|NP_001151105.1| DNA-binding protein RAV1 [Zea mays]
 gi|195644338|gb|ACG41637.1| DNA-binding protein RAV1 [Zea mays]
          Length = 395

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 149 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE--LAAKDLHGNEWRFRHI 206
           H F KT+T SD        + ++HA++  P    S    ++   L  +D  G  WRFR+ 
Sbjct: 214 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNLEDAAGKVWRFRYS 273

Query: 207 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENG 243
           +    + ++L  GWS FV  K L AGD   F R   G
Sbjct: 274 YWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAG 310


>gi|304308211|gb|ADL70418.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 292

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 26/103 (25%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE----------PALA 384
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E           + +
Sbjct: 6   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 65

Query: 385 PP--------------ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           PP               +NS+P+  P  P + ++ SSP SSVL
Sbjct: 66  PPRKKMRLPQHPDYNNLINSIPV--PSFPSNPLIRSSPLSSVL 106


>gi|298113108|gb|ADB96385.2| auxin response factor 16 [Arabidopsis thaliana]
          Length = 283

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 26/103 (25%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE----------PALA 384
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E           + +
Sbjct: 3   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 62

Query: 385 PP--------------ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           PP               +NS+P+  P  P + ++ SSP SSVL
Sbjct: 63  PPRKKMRLPQHPDYNNLINSIPV--PSFPSNPLIRSSPLSSVL 103


>gi|304308233|gb|ADL70429.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 292

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 26/103 (25%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE----------PALA 384
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E           + +
Sbjct: 6   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 65

Query: 385 PP--------------ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           PP               +NS+P+  P  P + ++ SSP SSVL
Sbjct: 66  PPRKKMRLPQHPDYNNLINSIPV--PSFPSNPLIRSSPLSSVL 106


>gi|304308213|gb|ADL70419.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|304308215|gb|ADL70420.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|304308223|gb|ADL70424.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|304308225|gb|ADL70425.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|304308229|gb|ADL70427.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|304308235|gb|ADL70430.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 291

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 26/103 (25%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE----------PALA 384
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E           + +
Sbjct: 6   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 65

Query: 385 PP--------------ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           PP               +NS+P+  P  P + ++ SSP SSVL
Sbjct: 66  PPRKKMRLPQHPDYNNLINSIPV--PSFPSNPLIRSSPLSSVL 106


>gi|304308219|gb|ADL70422.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 271

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPA--LAPPALNSLP 392
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E    + P  L S  
Sbjct: 3   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 62

Query: 393 MPRPKRPRSNMLPSSPDSSVL 413
            PR K      LP  PD + L
Sbjct: 63  PPRKKM----RLPQHPDYNNL 79


>gi|304308227|gb|ADL70426.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 286

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 26/103 (25%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE----------PALA 384
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E           + +
Sbjct: 6   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 65

Query: 385 PP--------------ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           PP               +NS+P+  P  P + ++ SSP SSVL
Sbjct: 66  PPRKKMRLPQHPDYNNLINSIPV--PSFPSNPLIRSSPLSSVL 106


>gi|304308139|gb|ADL70382.1| auxin response factor10 [Arabidopsis thaliana]
          Length = 289

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PR 395
           GT+  ++ ADP RW +S WR L+V WDE   +   +RVS W +E     P ++  P  PR
Sbjct: 1   GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPR 60

Query: 396 PK 397
            K
Sbjct: 61  KK 62


>gi|284811289|gb|ADB96383.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 271

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 26/103 (25%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE----------PALA 384
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E           + +
Sbjct: 3   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 62

Query: 385 PP--------------ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           PP               +NS+P+  P  P + ++ SSP SSVL
Sbjct: 63  PPRKKMRLPQHPDYNNLINSIPV--PSFPSNPLIRSSPLSSVL 103


>gi|304308151|gb|ADL70388.1| auxin response factor10 [Arabidopsis thaliana]
          Length = 288

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 337 GTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIEPALAPPALNSLPM-PR 395
           GT+  ++ ADP RW +S WR L+V WDE   +   +RVS W +E     P ++  P  PR
Sbjct: 1   GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPR 60

Query: 396 PK 397
            K
Sbjct: 61  KK 62


>gi|298113110|gb|ADB96386.2| auxin response factor 16 [Arabidopsis thaliana]
 gi|298113112|gb|ADB96387.2| auxin response factor 16 [Arabidopsis thaliana]
          Length = 282

 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 26/103 (25%)

Query: 335 FTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSLWKIE----------PALA 384
           F GT+  +  +DP RW +S WR L+V WDE   +   +RV+ W +E           + +
Sbjct: 3   FMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS 62

Query: 385 PP--------------ALNSLPMPRPKRPRSNMLPSSPDSSVL 413
           PP               +NS+P+  P  P + ++ SSP SSVL
Sbjct: 63  PPRKKMRLPQHPDYNNLINSIPV--PSFPSNPLIRSSPLSSVL 103


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.130    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,684,236,283
Number of Sequences: 23463169
Number of extensions: 584349341
Number of successful extensions: 1559849
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 1555436
Number of HSP's gapped (non-prelim): 2289
length of query: 730
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 580
effective length of database: 8,839,720,017
effective search space: 5127037609860
effective search space used: 5127037609860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 81 (35.8 bits)