BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>004796
MALYATVQTVGPAILSLKLIGPARFTSTTTALAVALAAYVVALPEGTHMKAKRIALGQIV
ITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENS
SERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRSY
YMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDS
LTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDDTVKE
YEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCSLSLGLAVLFGLLYSKPNGIWSGLPVAI
SFAAAREATFKVANIKAQGTVLGTVYGVLGCFLFERFLPIRFLSLIPWFIFTAFLRRSRM
YGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRASTLAK
VQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFFPFHI
ACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHELDSDLELLKEKVGSSI
KCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPNGISDLDEAAMGKLICSYLQHAKE
LVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWENPSSNVNLLE
ISCKINALYN

High Scoring Gene Products

Symbol, full name Information P value
AT2G28780 protein from Arabidopsis thaliana 2.3e-181

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  004796
        (730 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2053200 - symbol:AT2G28780 species:3702 "Arabi...  1760  2.3e-181  1
TAIR|locus:2074889 - symbol:AT3G09450 species:3702 "Arabi...  1011  5.4e-102  1


>TAIR|locus:2053200 [details] [associations]
            symbol:AT2G28780 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009734 "auxin mediated
            signaling pathway" evidence=RCA] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:BT004090 EMBL:BT008605
            IPI:IPI00533863 RefSeq:NP_180444.2 UniGene:At.27789
            ProteinModelPortal:Q84W96 PaxDb:Q84W96 PRIDE:Q84W96
            EnsemblPlants:AT2G28780.1 GeneID:817427 KEGG:ath:AT2G28780
            TAIR:At2g28780 eggNOG:NOG289418 HOGENOM:HOG000239132
            InParanoid:Q84W96 OMA:CSIMVEL PhylomeDB:Q84W96
            ProtClustDB:CLSN2918120 Genevestigator:Q84W96 Uniprot:Q84W96
        Length = 796

 Score = 1760 (624.6 bits), Expect = 2.3e-181, P = 2.3e-181
 Identities = 364/739 (49%), Positives = 497/739 (67%)

Query:     1 MALYATVQTVGPAILSLKLIGPARFTSXXXXXXXXXXXXXXXXPEG-THMKAKRIALGQI 59
             +ALYAT Q+VGPAI++LKLI PAR T+                P   TH+ AKRIALGQI
Sbjct:    71 LALYATCQSVGPAIVTLKLIRPARLTAETTALAAALAAFVVVLPNSSTHLVAKRIALGQI 130

Query:    60 VITYVIGFVNGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSEN 119
             V+ YVIG++ G +T+ VMHPL VAASTA+GV ACVLAL +P PRLA C+VK++CK L +N
Sbjct:   131 VLIYVIGYIKGAKTDPVMHPLQVAASTALGVVACVLALLVPLPRLATCEVKQSCKELGQN 190

Query:   120 SSERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFLRS 179
              + R+KLY+KAFC++D+ SA AS+SQA++L    +K  Q +KRYQ SM WERLP K  R 
Sbjct:   191 VTTRVKLYMKAFCSDDSMSATASVSQARVLARSSSKLYQTLKRYQPSMTWERLPFKIWRW 250

Query:   180 YYMNP--GEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQS 237
               +N   GEKLQ +EI L+GM+M V S +  P  +L GE+KE +K + E + L+IK+  +
Sbjct:   251 QNVNDNKGEKLQSMEIALRGMEMVVASKSPIPSSLLAGEVKEDLKNIQERVILSIKRVNN 310

Query:   238 CDSLTV-PESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKSSPNQSTNCLKDD 296
                 +V PES+ ++  + LQTLQ IP T Q+L  YFFLFC++LL+         N +K  
Sbjct:   311 SSQPSVTPESDPKNPDECLQTLQEIPGTPQDLPFYFFLFCIRLLETIIIAKPEENKVK-- 368

Query:   297 TVKEYEGSSNGFSFKEVWSNWSMKVKSKRLVPAFKCXXXXXXXXXXXXXYSKPNGIWSGL 356
              V E     N F  +   S+W     SK+++PA K              +SKPNG W+GL
Sbjct:   369 -VLE-----NKFKTRSWISDWD----SKKIMPALKLSLSLGLAILLGSMFSKPNGYWAGL 418

Query:   357 PVAISFAAAREATFKVANIKAQXXXXXXXXXXXXCFLFERFLPIRFLSLIPWFIFTAFLR 416
             PVA+SFAAAREATFKV N+KAQ            CF+F++FL +RFLSL+PWF+F++FL 
Sbjct:   419 PVAVSFAAAREATFKVTNVKAQGTVIGTVYGVMGCFVFQKFLTVRFLSLLPWFLFSSFLS 478

Query:   417 RSRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRAS 476
             RS+MYGQAGGISA IGAVLILGRKNFGPPSEFAI RI+ETFIGLSCSIM++L+FQPTRA+
Sbjct:   479 RSKMYGQAGGISAAIGAVLILGRKNFGPPSEFAIERIIETFIGLSCSIMVELVFQPTRAA 538

Query:   477 TLAKVQLSKSLATLHDCIGSMSLQSSQASWLENQKRLKMQVTELAKFIGEAEVEPNFWFF 536
              +AK++LS+S   L++C      ++S+A  +E+QK+L+  + EL KF  EA  EP+FWF 
Sbjct:   539 NIAKLELSRSFHALYECASLFGAKASKADIMESQKKLRSHLNELKKFTAEAHAEPSFWFS 598

Query:   537 PFHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHXXXXXXXXXXXXV 596
             PF+ +CY KL  +L+KM DLL F+ +++GFL +  +  +   K  +             +
Sbjct:   599 PFNFSCYEKLFKSLSKMADLLQFSGYAIGFLGEQGKTKSPQCKEILSNVDKDLKSLTESI 658

Query:   597 GSSIKCFEDVTTIKSLATIEKELEKN-NISYDLELGKSKNPNGISDLDEAAMGKLICSYL 655
             G   K FE++T +KSL  +EK L K+ N S+D+ELGK+ NP+  + + E    K++ +YL
Sbjct:   659 GLLAKSFEEITLLKSLDALEKALAKSDNTSWDIELGKTPNPSFSTAVSEPE--KILETYL 716

Query:   656 QHAKELVDKIKATE--GEKEL---RSQVVLSLSALGYCMQGLIRETKLIEEGIKELVQWE 710
             QH + + D +   E  GE+E+   +S+VVLSL ALG+C++ + +ET+ IEE +KE+VQ E
Sbjct:   717 QHCRSVADGLFRVEEDGEEEVEVDKSEVVLSLCALGFCVERIGKETREIEEMVKEVVQSE 776

Query:   711 NPSSNVNLLEISCKINALY 729
             NPSS+VNL EISCKI +LY
Sbjct:   777 NPSSHVNLHEISCKIRSLY 795


>TAIR|locus:2074889 [details] [associations]
            symbol:AT3G09450 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
            evidence=IEA] InterPro:IPR006726 Pfam:PF04632 GO:GO:0005886
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006810 EMBL:AC016661
            EMBL:AC011436 HOGENOM:HOG000239132 IPI:IPI00536522
            RefSeq:NP_187556.1 UniGene:At.53235 PRIDE:Q9S710
            EnsemblPlants:AT3G09450.1 GeneID:820103 KEGG:ath:AT3G09450
            TAIR:At3g09450 eggNOG:NOG128078 InParanoid:Q9S710 OMA:WDNITHE
            PhylomeDB:Q9S710 ProtClustDB:CLSN2915683 Genevestigator:Q9S710
            Uniprot:Q9S710
        Length = 775

 Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
 Identities = 247/709 (34%), Positives = 377/709 (53%)

Query:     4 YATVQTVGPAILSLKLIGPARFTSXXXX-XXXXXXXXXXXXPEGTHMKAKRIALGQIVIT 62
             YAT QT+  A++S+ ++GPA   +                 P  T +  KRIA GQIV+ 
Sbjct:    72 YATFQTIAIALVSVLVVGPASLGNGLVAPVAVALASFIVAFPVSTSLLTKRIAFGQIVVV 131

Query:    63 YVIGFV-NGERTEAVMHPLHVAASTAVGVFACVLALSLPYPRLACCQVKKNCKLLSENSS 121
             YV   V NGE     M P+HVA STA+G  A ++A+ LP+PRLA  Q+ K CKL +EN+ 
Sbjct:   132 YVTFVVFNGEVAHVFMLPVHVAGSTALGAIASLIAVLLPFPRLAHSQMSKGCKLYAENAL 191

Query:   122 ERLKLYVKAFCAEDNTSALASISQAKLLTIGGTKFIQNIKRYQESMKWERLPLKFL-RSY 180
             ERL ++V+   A DNT+A   I++A  L+      ++NIK + E + WER   +FL R  
Sbjct:   192 ERLNMFVEIMMARDNTTAQVLIARAASLSAAAKNTLKNIKIHHERISWERPDTRFLSRKQ 251

Query:   181 YMNPGEKLQDLEIPLKGMQMAVTSVTSFPVQILDGELKECVKKLDEHISLTIKQAQSCDS 240
              ++P EKL   +  L+G+++A+ S +SFP  +   EL   ++    HI+    +++S   
Sbjct:   252 KLDPAEKLHATDFLLRGLELALGSCSSFPQGMSRDELTRLLEGPRTHIA---PRSES--- 305

Query:   241 LTVPESNAEDIMKFLQTLQNIPTTTQELSSYFFLFCMKLLQWKS-SPNQSTNCLKDDTVK 299
              T+    ++D + +    +++ T    L   FF +C++L +    S  Q +  +   T +
Sbjct:   306 -TL---KSQDSLGWHHEAESLSTAA--LPVCFFRYCVELFRGDFLSLRQDSKSVNGRTTE 359

Query:   300 EYEGSSN-GFSF-KEVWSNWSMKVKSKRLVPAFKCXXXXXXXXXXXXXYSKPNGIWSGLP 357
             E    +N G S  ++ W    + +  +R V AFKC             Y+K NG WSGL 
Sbjct:   360 EEIHPANEGLSMARKFWDILCVWMARERFVFAFKCSISLGLAVLFGILYNKNNGYWSGLT 419

Query:   358 VAISFAAAREATFKVANIKAQXXXXXXXXXXXXCFLFERFLPIRFLSLIPWFIFTAFLRR 417
             VAIS  + R+AT  VAN + Q            C +F+R    RFL L+PW I   F+R 
Sbjct:   420 VAISLVSGRQATLTVANSRLQGTAMGSVYGLICCSVFQRLEEFRFLPLLPWIILAVFMRH 479

Query:   418 SRMYGQAGGISAVIGAVLILGRKNFGPPSEFAIARIVETFIGLSCSIMIDLLFQPTRAST 477
             S++YGQ GG++A I A+LILGR+N+G P+EFAIARIVE  IGL C +  ++L  P RA+T
Sbjct:   480 SKVYGQPGGVTAAIAALLILGRRNYGAPTEFAIARIVEASIGLLCFVFGEILVTPARAAT 539

Query:   478 LAKVQLSKSLATLHDCIGSMSLQSSQ------ASWLENQKRLKMQVTELAKFIGEAEVEP 531
             LA+ ++S  L  L DCI S+ L S Q      A   ++Q +LK  V  L +F  EA  EP
Sbjct:   540 LARTEISHCLDALLDCIQSLVLCSEQKNQKVVADLRKSQVKLKSHVEALERFAAEALTEP 599

Query:   532 NFWFFP-FHIACYSKLLGTLTKMVDLLLFAAHSVGFLEQDSQRIATSWKNEVHXXXXXXX 590
                F    +   Y++LLG+ +K+ DL L+    +  L      +A  W N  H       
Sbjct:   600 KIPFLRRLNTDSYNRLLGSFSKISDLCLYVCDGLKNLSGVQPTLAFPWDNITHELRAFQE 659

Query:   591 XXXXXVGSSIKCFEDVTTIKSLATIEKELEKNNISYDLELGKSKNPN-GISDL--DEAAM 647
                  +  S+KC ++++  KS A ++KEL+K  I +D+E G + N N    +L   +A +
Sbjct:   660 K----LHPSVKCLKEISQTKSQARLQKELQKRKICHDVEAGTTSNDNYSYMELGPSQADV 715

Query:   648 GKLICSYLQHAKELVDKIKATEGEKELRSQVVLSLSALGYCMQGLIRET 696
              +   S++   KE  DKI     +   +S+  L LS+LG+C+  L++ET
Sbjct:   716 ERFSVSFVMLLKEATDKISCNTADDAFKSETALCLSSLGFCISRLMQET 764


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      730       677   0.00078  121 3  11 22  0.37    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  631 (67 KB)
  Total size of DFA:  358 KB (2177 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  53.83u 0.09s 53.92t   Elapsed:  00:00:03
  Total cpu time:  53.83u 0.09s 53.92t   Elapsed:  00:00:03
  Start:  Fri May 10 01:04:44 2013   End:  Fri May 10 01:04:47 2013

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