BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004801
(730 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z1R2|BAG6_MOUSE Large proline-rich protein BAG6 OS=Mus musculus GN=Bag6 PE=1 SV=1
Length = 1154
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 19/138 (13%)
Query: 18 TIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAY 77
++E+ +KTLDSQT T V Q+ V KE IA+ + SE+QRLI +G+VL+DD+ L Y
Sbjct: 16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEY 75
Query: 78 HVEDGHTLHMVVRQP----VPS-------SSDGTHN---LPGT----SRSHGSHVAPSVV 119
+V G +H+V R P +PS S+ TH LPGT + H + V+
Sbjct: 76 NV-GGKVIHLVERAPPQTQLPSGASSGTGSASATHGGAPLPGTRGPGASVHDRNANSYVM 134
Query: 120 IETFNLPDRGDGVPSEIS 137
+ TFNLP G V I+
Sbjct: 135 VGTFNLPSDGSAVDVHIN 152
>sp|Q6MG49|BAG6_RAT Large proline-rich protein BAG6 OS=Rattus norvegicus GN=Bag6 PE=2
SV=2
Length = 1146
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 19/138 (13%)
Query: 18 TIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAY 77
++E+ +KTLDSQT T V Q+ V KE IA+ + SE+QRLI +G+VL+DD+ L Y
Sbjct: 16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQDY 75
Query: 78 HVEDGHTLHMVVRQP----VPS-------SSDGTHN---LPGT----SRSHGSHVAPSVV 119
+V G +H+V R P +PS S+ TH LPGT + H + V+
Sbjct: 76 NV-GGKVIHLVERAPPQTQLPSGASSGTGSASATHGGGPLPGTRGPGASGHDRNANSYVM 134
Query: 120 IETFNLPDRGDGVPSEIS 137
+ TFNLP G V I+
Sbjct: 135 VGTFNLPSDGSAVDVHIN 152
>sp|P46379|BAG6_HUMAN Large proline-rich protein BAG6 OS=Homo sapiens GN=BAG6 PE=1 SV=2
Length = 1132
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 19/138 (13%)
Query: 18 TIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAY 77
++E+ +KTLDSQT T V Q+ V KE IA+ + SE+QRLI +G+VL+DD+ L Y
Sbjct: 16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEY 75
Query: 78 HVEDGHTLHMVVRQP----VPS-------SSDGTH---NLPGT----SRSHGSHVAPSVV 119
+V G +H+V R P +PS S+ TH + PGT + H + V+
Sbjct: 76 NV-GGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVM 134
Query: 120 IETFNLPDRGDGVPSEIS 137
+ TFNLP G V I+
Sbjct: 135 VGTFNLPSDGSAVDVHIN 152
>sp|Q10169|DSK2_SCHPO Deubiquitination-protection protein dph1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dph1 PE=4 SV=1
Length = 354
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 17 TTIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSA 76
T I + IK + Q Y + VD + V ALKE IA V + E+QRLI G+VLKD++ L
Sbjct: 2 TNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKT 61
Query: 77 YHVEDGHTLHMV 88
Y ++DGH++H+V
Sbjct: 62 YKIQDGHSIHLV 73
>sp|A5D9M6|BAG6_PIG Large proline-rich protein BAG6 OS=Sus scrofa GN=BAG6 PE=2 SV=1
Length = 1128
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 18 TIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAY 77
++E+ +KTLDSQT T V Q+ V KE IA+ + SE+QRLI +G+VL+DD+ L Y
Sbjct: 16 SLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEY 75
Query: 78 HVEDGHTLHMVVRQP----VPS-SSDGTHNLPGT-------------SRSHGSHVAPSVV 119
+V G +H+V R P +PS +S GT + T + H + V+
Sbjct: 76 NV-GGKVIHLVERAPPQTQLPSGASSGTGSASATHGGGPPPGTRGPGASVHDRNANSYVM 134
Query: 120 IETFNLPDRGDGV 132
+ TFNLP G V
Sbjct: 135 VGTFNLPSDGSAV 147
>sp|A4IH17|BAG6_XENTR Large proline-rich protein bag6 OS=Xenopus tropicalis GN=Bag6
PE=2 SV=1
Length = 1129
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
+E+ +KTLDSQT T VD ++ V K I+S G+ E+QRLI +G+VL++D+ L Y+
Sbjct: 1 MEVTVKTLDSQTRTFTVDAEITVKEFKTHISSDVGISPEKQRLIYQGRVLQEDKKLKEYN 60
Query: 79 VEDGHTLHMVVRQP 92
V DG +H+V R P
Sbjct: 61 V-DGKVIHLVERAP 73
>sp|Q9YHD3|BAG6A_XENLA Large proline-rich protein bag6-A OS=Xenopus laevis GN=Bag6-a PE=2
SV=1
Length = 1135
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 19/145 (13%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
+E+ +KTLDSQT T V+ ++ V K I+S G+ E+QRLI +G+VL++D+ L Y+
Sbjct: 7 MEVTVKTLDSQTRTFTVETEISVKDFKAHISSDVGISPEKQRLIYQGRVLQEDKKLKEYN 66
Query: 79 VEDGHTLHMVVRQPVPSSSDGTHN---------------LPGTSRSHGSHVAPSVVIETF 123
V DG +H+V R P + +PG +G+ V++ TF
Sbjct: 67 V-DGKVIHLVERAPPQTQPSTGGPSTSSSTSPTSSNAAPVPGAPERNGNSY---VMVGTF 122
Query: 124 NLPDRGDGVPSEISQIVSAVLGSFG 148
NLP G+ + VS V G+ G
Sbjct: 123 NLPHVMSGLVRQQRPSVSTVNGNDG 147
>sp|Q6PA26|BAG6B_XENLA Large proline-rich protein bag6-B OS=Xenopus laevis GN=Bag6-b
PE=2 SV=1
Length = 1116
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
+++ +KTLDSQT T V+ ++ V K I+S G+ E+QRLI +G+VL++D+ L+ Y+
Sbjct: 7 MDVTVKTLDSQTRTFTVEAEILVKEFKAHISSAVGITPEKQRLIYQGRVLQEDKKLNEYN 66
Query: 79 VEDGHTLHMVVRQP 92
V DG +H+V R P
Sbjct: 67 V-DGKVIHLVERAP 79
>sp|A7X5R6|BAG6_ORNAN Large proline-rich protein BAG6 OS=Ornithorhynchus anatinus GN=BAG6
PE=3 SV=1
Length = 1088
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 20/138 (14%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
+E+ +KTLDSQT T V ++ V KE IA+ + ++QRLI +G+VL+DD+ L Y+
Sbjct: 24 LEVSVKTLDSQTRTFTVGAEMTVKEFKEHIAAAVSIPPDKQRLIYQGRVLQDDKKLQEYN 83
Query: 79 VEDGHTLHMVVRQPV----PSSSDGTH----------NLPGTSRSHGSHV-----APSVV 119
V G +H+V R P PSS + P R G+ V V+
Sbjct: 84 V-GGKVIHLVERAPPQTQGPSSGGASRAGSPSAPHAGAPPAGPRGPGAPVHDRNANSYVM 142
Query: 120 IETFNLPDRGDGVPSEIS 137
+ TFNLP G V I+
Sbjct: 143 VGTFNLPSDGSAVDVHIN 160
>sp|P48510|DSK2_YEAST Ubiquitin domain-containing protein DSK2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DSK2 PE=1
SV=2
Length = 373
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 18 TIEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAY 77
++ I IK+ + + V + V KE I G+ QRLI GK+LKDDQ + +Y
Sbjct: 2 SLNIHIKS-GQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLIYSGKILKDDQTVESY 60
Query: 78 HVEDGHTLHMVVRQPVP 94
H++DGH++H+V QP P
Sbjct: 61 HIQDGHSVHLVKSQPKP 77
>sp|A3KPW9|BAG6_DANRE Large proline-rich protein BAG6 OS=Danio rerio GN=Bag6 PE=3 SV=1
Length = 1160
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
IE+ +KTLDSQ+ T V + V KE IA+ + ++QRLI +GKVL+D++ L+ Y+
Sbjct: 7 IEVTVKTLDSQSRTFTVRGEWTVKQFKEHIAASVEISVDKQRLIYQGKVLQDERTLTEYN 66
Query: 79 VEDGHTLHMVVR 90
V DG +H+V R
Sbjct: 67 V-DGKVIHLVER 77
>sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1
Length = 523
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I IK+ + + V+ + V K+ IA+ + ++QQR+I G++LKD Q L
Sbjct: 2 VKINIKSSTDNKFDVDVELGITVADFKKVIATKCSIPADQQRIIYSGRILKDHQTLDEIK 61
Query: 79 VEDGHTLHMV----------VRQPVPSSSDGT-HNLPGTSRSHGSHVAPSVVIETFN 124
++DGHT+H+V V Q VP+ S+ +PG ++ + ++ E FN
Sbjct: 62 IQDGHTVHLVKGAAPPPPPPVEQQVPTPSNTQPQGIPGVPQNINDMMNNPMIQEMFN 118
>sp|P0C224|RL40_NEUCR Ubiquitin-60S ribosomal protein L40 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=ubi-1 PE=1 SV=2
Length = 128
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K++I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P49633|RL40_ACACA Ubiquitin-60S ribosomal protein L40 OS=Acanthamoeba castellanii
PE=2 SV=2
Length = 128
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K++I G+ +QQRLI GK L+D + L+ Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P14797|RS27A_DICDI Ubiquitin-40S ribosomal protein S27a OS=Dictyostelium discoideum
GN=ubqC PE=1 SV=2
Length = 154
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I IKTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFIKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P68200|RS27A_ICTPU Ubiquitin-40S ribosomal protein S27a OS=Ictalurus punctatus
GN=rps27a PE=2 SV=2
Length = 156
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|Q05120|UBIL_NPVOP Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid
polyhedrosis virus GN=V-UBI PE=3 SV=1
Length = 93
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T T+ + V +K++IA GV +QQRLI GK L+D Q L+ Y+
Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLHMV+R
Sbjct: 61 IQKESTLHMVLR 72
>sp|P62979|RS27A_HUMAN Ubiquitin-40S ribosomal protein S27a OS=Homo sapiens GN=RPS27A
PE=1 SV=2
Length = 156
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P62978|RS27A_CAVPO Ubiquitin-40S ribosomal protein S27a OS=Cavia porcellus GN=RPS27A
PE=1 SV=2
Length = 156
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P62992|RS27A_BOVIN Ubiquitin-40S ribosomal protein S27a OS=Bos taurus GN=RPS27A PE=1
SV=2
Length = 156
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P62982|RS27A_RAT Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus
GN=Rps27a PE=1 SV=2
Length = 156
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P62983|RS27A_MOUSE Ubiquitin-40S ribosomal protein S27a OS=Mus musculus GN=Rps27a
PE=1 SV=2
Length = 156
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P79781|RS27A_CHICK Ubiquitin-40S ribosomal protein S27a OS=Gallus gallus GN=RPS27A
PE=2 SV=3
Length = 156
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P68202|RS27A_PLUXY Ubiquitin-40S ribosomal protein S27a OS=Plutella xylostella PE=2
SV=2
Length = 155
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P18101|RL40_DROME Ubiquitin-60S ribosomal protein L40 OS=Drosophila melanogaster
GN=RpL40 PE=1 SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P29504|RS27A_MANSE Ubiquitin-40S ribosomal protein S27a OS=Manduca sexta PE=2 SV=2
Length = 155
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0C276|RL40_SHEEP Ubiquitin-60S ribosomal protein L40 OS=Ovis aries GN=UBA52 PE=2
SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P62986|RL40_RAT Ubiquitin-60S ribosomal protein L40 OS=Rattus norvegicus GN=Uba52
PE=1 SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0C275|RL40_PONPY Ubiquitin-60S ribosomal protein L40 OS=Pongo pygmaeus GN=UBA52
PE=2 SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P63053|RL40_PIG Ubiquitin-60S ribosomal protein L40 OS=Sus scrofa GN=UBA52 PE=1
SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P68205|RL40_OPHHA Ubiquitin-60S ribosomal protein L40 OS=Ophiophagus hannah PE=2
SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P62984|RL40_MOUSE Ubiquitin-60S ribosomal protein L40 OS=Mus musculus GN=Uba52 PE=1
SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0C273|RL40_MACFA Ubiquitin-60S ribosomal protein L40 OS=Macaca fascicularis
GN=UBA52 PE=2 SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P62987|RL40_HUMAN Ubiquitin-60S ribosomal protein L40 OS=Homo sapiens GN=UBA52 PE=1
SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P63052|RL40_FELCA Ubiquitin-60S ribosomal protein L40 OS=Felis catus GN=UBA52 PE=2
SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P63050|RL40_CANFA Ubiquitin-60S ribosomal protein L40 OS=Canis familiaris GN=UBA52
PE=2 SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P63048|RL40_BOVIN Ubiquitin-60S ribosomal protein L40 OS=Bos taurus GN=UBA52 PE=1
SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P16709|UBIL_NPVAC Ubiquitin-like protein OS=Autographa californica nuclear
polyhedrosis virus GN=V-UBI PE=3 SV=2
Length = 77
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I IKTL +T T + V LK++IA GV +QQRLI GK L+D + ++ Y+
Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLHMV+R
Sbjct: 61 IQKESTLHMVLR 72
>sp|P14794|RL40_DICDI Ubiquitin-60S ribosomal protein L40 OS=Dictyostelium discoideum
GN=ubqB PE=1 SV=2
Length = 128
Score = 54.7 bits (130), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P49632|RL40_CAEEL Ubiquitin-60S ribosomal protein L40 OS=Caenorhabditis elegans
GN=ubq-2 PE=3 SV=2
Length = 128
Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0CH07|RL402_SCHPO Ubiquitin-60S ribosomal protein L40 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubi2 PE=1 SV=1
Length = 128
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0CH06|RL401_SCHPO Ubiquitin-60S ribosomal protein L40 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubi1 PE=1 SV=1
Length = 128
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P27923|RS27A_MAIZE Ubiquitin-40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=2
SV=2
Length = 155
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + L+ Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P68203|RS27A_SPOFR Ubiquitin-40S ribosomal protein S27a OS=Spodoptera frugiperda
PE=2 SV=2
Length = 156
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0CG86|RS271_HORVU Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1
PE=3 SV=1
Length = 155
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + L+ Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0CH09|RL402_YEAST Ubiquitin-60S ribosomal protein L40 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPL40B PE=1 SV=1
Length = 128
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0CH08|RL401_YEAST Ubiquitin-60S ribosomal protein L40 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPL40A PE=1 SV=1
Length = 128
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P51431|R27AB_ORYSJ Ubiquitin-40S ribosomal protein S27a-2 OS=Oryza sativa subsp.
japonica GN=RPS27AB PE=2 SV=3
Length = 155
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + L+ Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P0CG87|RS272_HORVU Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB2
PE=3 SV=1
Length = 155
Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + L+ Y+
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
>sp|P15357|RS27A_DROME Ubiquitin-40S ribosomal protein S27a OS=Drosophila melanogaster
GN=RpS27A PE=1 SV=2
Length = 156
Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 19 IEIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYH 78
++I +KTL +T TL V+ + +K +I G+ +QQRLI GK L+D + LS Y+
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 79 VEDGHTLHMVVR 90
++ TLH+V+R
Sbjct: 61 IQKESTLHLVLR 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 279,151,834
Number of Sequences: 539616
Number of extensions: 12723275
Number of successful extensions: 31432
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 30356
Number of HSP's gapped (non-prelim): 1112
length of query: 730
length of database: 191,569,459
effective HSP length: 125
effective length of query: 605
effective length of database: 124,117,459
effective search space: 75091062695
effective search space used: 75091062695
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)