Query 004809
Match_columns 729
No_of_seqs 434 out of 2850
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 06:26:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004809.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004809hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 2E-130 8E-135 1135.2 53.6 632 85-723 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 8E-117 3E-121 1025.1 53.5 599 85-722 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 8.7E-86 3E-90 794.4 42.8 539 97-726 6-609 (926)
4 3afg_A Subtilisin-like serine 100.0 7.3E-60 2.5E-64 537.4 37.2 340 40-575 59-418 (539)
5 3t41_A Epidermin leader peptid 100.0 1.8E-55 6.1E-60 497.3 27.2 333 40-575 65-465 (471)
6 2z2z_A TK-subtilisin precursor 100.0 2.6E-56 8.8E-61 492.1 19.7 321 40-575 23-392 (395)
7 1y9z_A Alkaline serine proteas 100.0 3.6E-55 1.2E-59 489.8 27.6 366 97-596 13-437 (441)
8 1r6v_A Subtilisin-like serine 100.0 3.6E-52 1.2E-56 479.7 24.3 350 40-586 52-450 (671)
9 2p4e_P Proprotein convertase s 100.0 2.1E-54 7.1E-59 495.2 3.4 302 40-541 108-423 (692)
10 4h6x_A Thiazoline oxidase/subt 100.0 3E-53 1E-57 461.2 7.1 301 98-574 21-337 (357)
11 1dbi_A AK.1 serine protease; h 100.0 1.7E-50 6E-55 425.0 25.0 264 92-574 13-279 (280)
12 1r0r_E Subtilisin carlsberg; h 100.0 1.3E-50 4.6E-55 424.7 22.1 256 98-574 14-274 (274)
13 1gci_A Subtilisin; hydrolase, 100.0 3E-50 1E-54 420.5 23.3 255 98-574 14-269 (269)
14 1to2_E Subtilisin BPN'; serine 100.0 5.9E-50 2E-54 421.2 22.7 258 98-575 14-276 (281)
15 2x8j_A Intracellular subtilisi 100.0 1.1E-50 3.8E-55 435.6 17.4 263 98-574 31-310 (327)
16 3zxy_A Subtilisin-like protein 100.0 1.5E-50 5.2E-55 426.5 16.5 264 104-574 3-274 (282)
17 2ixt_A 36KDA protease; serine 100.0 5.6E-49 1.9E-53 420.2 27.9 283 97-569 15-309 (310)
18 1thm_A Thermitase; hydrolase(s 100.0 3.1E-49 1.1E-53 415.4 25.3 257 98-574 21-278 (279)
19 4h6w_A N-terminal cyanobactin 100.0 5.1E-50 1.8E-54 427.6 14.3 270 98-574 11-287 (306)
20 2z30_A TK-subtilisin; thermoco 100.0 2.2E-49 7.5E-54 424.9 18.1 264 97-574 17-316 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 2.1E-49 7.1E-54 430.2 16.5 271 97-575 32-329 (347)
22 3lpc_A APRB2; protease, subtil 100.0 1.9E-48 6.6E-53 421.5 19.2 298 98-575 22-337 (340)
23 1wmd_A Protease; alpha-beta hy 100.0 4.7E-48 1.6E-52 431.8 21.6 291 98-576 11-319 (434)
24 3lxu_X Tripeptidyl-peptidase 2 100.0 6.4E-47 2.2E-51 453.1 27.9 359 182-722 267-652 (1354)
25 1sh7_A Extracellular subtilisi 100.0 2.2E-46 7.4E-51 394.3 26.1 235 98-541 19-257 (284)
26 2b6n_A Proteinase K; S binding 100.0 3.4E-46 1.2E-50 392.0 24.7 237 98-541 21-261 (278)
27 2oxa_A Extracellular serine pr 100.0 9.8E-47 3.3E-51 437.0 20.4 296 98-579 60-429 (600)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 6.7E-46 2.3E-50 389.8 24.3 236 98-542 21-260 (276)
29 2pwa_A Proteinase K; structure 100.0 4.5E-46 1.5E-50 390.8 20.1 227 100-540 24-259 (279)
30 1p8j_A Furin precursor; prohor 100.0 1.2E-45 4E-50 416.0 19.9 291 98-577 28-332 (471)
31 2qtw_B Proprotein convertase s 100.0 7.9E-45 2.7E-49 406.0 22.3 279 100-574 18-313 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 6.1E-45 2.1E-49 412.9 20.7 283 98-577 44-344 (503)
33 3f7m_A Alkaline serine proteas 100.0 8.7E-45 3E-49 381.9 19.1 229 100-542 25-262 (279)
34 3hjr_A Extracellular serine pr 100.0 1.6E-42 5.5E-47 402.8 27.4 295 98-577 60-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 9.2E-25 3.1E-29 248.3 7.8 96 213-312 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 9.4E-22 3.2E-26 213.2 11.4 100 214-313 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.9 6.2E-10 2.1E-14 125.7 4.7 98 214-312 262-374 (544)
38 2w2n_P Proprotein convertase s 98.7 5.6E-09 1.9E-13 93.3 3.3 62 9-83 52-113 (114)
39 3icu_A E3 ubiquitin-protein li 98.5 5.2E-07 1.8E-11 87.6 10.4 88 350-437 85-187 (194)
40 3cnq_P Subtilisin BPN'; unclea 98.3 7.5E-07 2.6E-11 74.2 5.3 47 40-87 33-79 (80)
41 2qtw_A Proprotein convertase s 98.1 9.5E-07 3.2E-11 79.9 3.3 44 40-83 80-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 97.6 4.5E-05 1.5E-09 62.7 4.6 43 41-83 30-75 (76)
43 2ek8_A Aminopeptidase; metallo 96.8 0.0036 1.2E-07 68.7 9.7 84 341-424 93-182 (421)
44 2z30_B TK-subtilisin; thermoco 96.6 0.0016 5.6E-08 51.5 4.0 42 40-82 22-63 (65)
45 3kas_A Transferrin receptor pr 96.2 0.0074 2.5E-07 69.4 8.1 83 342-424 109-230 (640)
46 3fed_A Glutamate carboxypeptid 95.9 0.013 4.5E-07 68.0 8.5 85 341-425 127-268 (707)
47 3iib_A Peptidase M28; YP_92679 95.3 0.055 1.9E-06 59.6 10.3 97 340-436 105-226 (444)
48 2ys4_A Hydrocephalus-inducing 93.2 0.19 6.4E-06 44.7 7.2 74 634-718 41-114 (122)
49 3lxu_X Tripeptidyl-peptidase 2 88.4 0.29 9.9E-06 60.0 4.4 25 104-128 32-56 (1354)
50 2e6j_A Hydin protein; PAPD, st 78.8 1.6 5.6E-05 37.6 4.0 66 635-706 27-93 (112)
51 1y9z_A Alkaline serine proteas 77.7 1.4 4.9E-05 48.1 4.0 30 444-481 182-211 (441)
52 2qsv_A Uncharacterized protein 74.3 10 0.00035 37.0 8.9 81 635-721 20-104 (220)
53 2r39_A FIXG-related protein; s 70.3 52 0.0018 28.4 13.2 55 635-691 32-86 (118)
54 3qbt_B Inositol polyphosphate 68.6 10 0.00034 34.3 6.7 87 635-723 44-138 (140)
55 3idu_A Uncharacterized protein 52.9 47 0.0016 29.3 8.0 51 634-688 33-84 (127)
56 3qis_A Inositol polyphosphate 49.4 36 0.0012 35.9 7.9 55 635-690 47-105 (366)
57 2kq1_A BH0266 protein; solutio 43.7 5.1 0.00018 35.1 0.1 53 637-689 56-110 (119)
58 1z9l_A Vesicle-associated memb 42.0 63 0.0022 28.3 7.2 52 635-689 28-79 (128)
59 1m1s_A WR4; structural genomic 41.1 79 0.0027 27.4 7.4 50 637-689 26-75 (116)
60 3zyz_A Beta-D-glucoside glucoh 41.0 55 0.0019 37.8 8.3 55 634-689 613-674 (713)
61 1row_A SSP-19, MSP-domain prot 40.8 94 0.0032 26.5 7.8 50 637-689 18-67 (109)
62 1w8o_A Bacterial sialidase; 3D 39.9 1.6E+02 0.0056 32.6 12.1 78 619-706 363-441 (601)
63 1msp_A MSP, major sperm protei 36.7 95 0.0032 27.2 7.4 50 636-688 27-76 (126)
64 1wic_A Hypothetical protein ri 36.6 67 0.0023 29.2 6.6 51 636-689 37-87 (152)
65 3isy_A Bsupi, intracellular pr 35.4 1.2E+02 0.0042 26.4 7.7 70 634-706 18-104 (120)
66 1wgl_A TOLL-interacting protei 34.0 25 0.00084 26.7 2.6 32 507-538 6-37 (59)
67 3abz_A Beta-glucosidase I; gly 34.0 1E+02 0.0036 36.2 9.3 69 617-687 717-795 (845)
68 2qsv_A Uncharacterized protein 32.1 1.8E+02 0.006 27.9 9.3 78 634-719 134-217 (220)
69 2cri_A Vesicle-associated memb 31.0 93 0.0032 28.0 6.5 51 636-689 33-83 (147)
70 2x41_A Beta-glucosidase; hydro 27.5 64 0.0022 37.3 5.9 73 617-689 597-677 (721)
71 2l04_A Major tail protein V; b 27.1 86 0.0029 25.9 5.0 26 663-689 8-33 (91)
72 1ni7_A ER75, hypothetical prot 21.6 64 0.0022 29.6 3.5 32 500-532 79-110 (155)
73 3rfr_A PMOB; membrane, oxidore 20.7 2.1E+02 0.0073 30.1 7.5 50 634-689 298-369 (419)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=2.4e-130 Score=1135.16 Aligned_cols=632 Identities=50% Similarity=0.839 Sum_probs=573.8
Q ss_pred CCCCCcccCCCCCCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeecc
Q 004809 85 TTHSSQFLGLNPKSGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFN 164 (729)
Q Consensus 85 ~~~s~~~~gl~~~~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 164 (729)
|+++|+|+||.+..++|..+.+|+||+|||||||||++||+|.+.|++++|.+|+|.|+.|.+|+.+.||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 57899999998777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCCChHHHHHHHHH
Q 004809 165 KGLLAKNPTITIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGSFTSDIIAAIDQ 244 (729)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~ 244 (729)
++++....+...+..+++|.+||||||||||||+.+++.+++|++.|+++||||+|+|++||+|+..||..+++++||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~ 160 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQ 160 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHH
Confidence 87654332333455678999999999999999999999999999999999999999999999999888999999999999
Q ss_pred HHHcCCcEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeCC
Q 004809 245 AIIDGVDVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLGN 324 (729)
Q Consensus 245 A~~~gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~~ 324 (729)
|+++|+||||||||....+++.+++.+++++|+++||+||+||||+|+...++++.+||+|+|||++.||.|...+.++|
T Consensus 161 A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lgn 240 (649)
T 3i6s_A 161 AVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLGN 240 (649)
T ss_dssp HHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEETT
T ss_pred HHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeCC
Confidence 99999999999999877778889999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeeeecCCCCCCceeeEEEcC---Cccccccc-ccC--CceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCc
Q 004809 325 GNTVTGLSLYPGNSSLIDFPIVFMD---ECLNLAEL-KKV--GQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGL 398 (729)
Q Consensus 325 g~~~~g~~~~~~~~~~~~~~lv~~~---~c~~~~~~-~~~--~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 398 (729)
|+++.|.++++.......+|++|.. .|.+..++ .++ +||||+|.|+.+.+.+|..+++++|+.|+|++|+. .
T Consensus 241 g~~~~g~sl~~~~~~~~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~--~ 318 (649)
T 3i6s_A 241 GLKIRGWSLFPARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDP--G 318 (649)
T ss_dssp SCEEEEECCCSSCBCEEEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCG--G
T ss_pred CcEEeeeecccCcccCcceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCc--c
Confidence 9999999999887667789999964 69999988 777 99999999999999999999999999999999986 3
Q ss_pred eeecc-ccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEe
Q 004809 399 EFFLQ-SSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILA 477 (729)
Q Consensus 399 ~~~~~-~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~s 477 (729)
....+ +.+|++.|+..+|+.|++|++++.+++++|.+..+.++..+++.++.||||||+.+.+++|||||+|||++|++
T Consensus 319 ~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ils 398 (649)
T 3i6s_A 319 VFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILA 398 (649)
T ss_dssp GGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEE
T ss_pred ccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEe
Confidence 34445 89999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred ecCCCCCccccCCCC-CCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCC
Q 004809 478 AWPSNLAVSQTNSKL-SFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKP 556 (729)
Q Consensus 478 a~~~~~~~~~~~~~~-~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~ 556 (729)
+|+....+.....+. +...|..+||||||||||||+||||||+||+|||++||++||+||+++++.+.++.+... ..+
T Consensus 399 a~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~-~~~ 477 (649)
T 3i6s_A 399 AYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDN-NKA 477 (649)
T ss_dssp ECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETTT-SSB
T ss_pred ecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCccccccc-CCc
Confidence 999866554443333 447899999999999999999999999999999999999999999999999999988643 678
Q ss_pred CCCCCCCccccCccCcCCCCccccCChhhHHHHhhhcCCCccceeEeccccccc--cCCCCCCCCCCceeeee-ccCCCc
Q 004809 557 ATPIAMGAGHINPDKALDPGLIYDATTEDYVSLLCALNLTMKRIQTITRSYSVN--CSTSSLDLNYPSFIAFF-NANESK 633 (729)
Q Consensus 557 ~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~--c~~~~~~lN~ps~~~~~-~~~~~~ 633 (729)
+++++||+|+|||.+|++||||||++.+||++|||++||+.++|+.|++. +++ |+....+||||||++.+ +... .
T Consensus 478 a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~-~~~~~C~~~~~~lNyPs~~~~~~~~~~-~ 555 (649)
T 3i6s_A 478 ATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARS-SASHNCSNPSADLNYPSFIALYSIEGN-F 555 (649)
T ss_dssp CCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTT-TSCC-CCCCCCCCCCSSEEEEECCSSC-C
T ss_pred CCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecC-CCcCCCCCchhhcCCCcEEeecccCCC-C
Confidence 89999999999999999999999999999999999999999999999987 666 98777899999999987 3211 0
Q ss_pred ee--EEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEecCCCCCCCeeEEEEEEEEEcCCc
Q 004809 634 SV--QEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQMDEETVVAFCYLSWIETGGK 711 (729)
Q Consensus 634 ~~--~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~l~~~~~~~~ 711 (729)
.. ++|+|||||||+..+||+++++.|.|++|+|+|++|+|++.+|+++|+|||+...... +. |.||+|+|++.+++
T Consensus 556 ~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~-~~-~~fg~l~w~~~~~~ 633 (649)
T 3i6s_A 556 TLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEG-QS-RNVGSITWVEQNGN 633 (649)
T ss_dssp CCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC----C-CCEEEEEEEETTSC
T ss_pred ccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCC-Cc-eEEEEEEEEcCCCC
Confidence 12 8999999999999999999999999999999999999998999999999999875433 45 89999999933399
Q ss_pred eEEEEEEEEEec
Q 004809 712 HVVKSPIVVTSL 723 (729)
Q Consensus 712 ~~v~~P~~~~~~ 723 (729)
|.||+||+|++.
T Consensus 634 h~vrsPi~v~~~ 645 (649)
T 3i6s_A 634 HSVRSPIVTSPI 645 (649)
T ss_dssp CEEEEEEEEEEC
T ss_pred eEEEEeEEEEEc
Confidence 999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=7.7e-117 Score=1025.08 Aligned_cols=599 Identities=39% Similarity=0.654 Sum_probs=509.1
Q ss_pred CCCCCcccCCCCCCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeecc
Q 004809 85 TTHSSQFLGLNPKSGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFN 164 (729)
Q Consensus 85 ~~~s~~~~gl~~~~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 164 (729)
|+++|+||||. ..+|.++.+|+||+|||||||||++||+|.++++++++.+|+|.|+.+.+|. ||+|++|+++|.
T Consensus 1 tt~s~~flGl~--~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ig~~~~~ 75 (621)
T 3vta_A 1 TTRSWDFLGFP--LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYH 75 (621)
T ss_dssp CCSHHHHTTCC--TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSEEEEEECC
T ss_pred CCCChhHcCCC--ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcceeeeeecc
Confidence 68999999995 4689999999999999999999999999999999999999999999998886 999999999998
Q ss_pred ccccccCCCCccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCCChHHHHHHHHH
Q 004809 165 KGLLAKNPTITIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGSFTSDIIAAIDQ 244 (729)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~ 244 (729)
.+.... +.+..+++|.+||||||||||||+.+.+.+.+|++.|.++||||+|+|++||+|++.||..+++++||++
T Consensus 76 ~~~~~~----~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~ 151 (621)
T 3vta_A 76 IGRPIS----PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDD 151 (621)
T ss_dssp CSSSCC----TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHH
T ss_pred cCCccC----CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHH
Confidence 765432 2344678999999999999999999988888899889999999999999999999999999999999999
Q ss_pred HHHcCCcEEEeecCCCC-CCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeC
Q 004809 245 AIIDGVDVLSMSLGLDG-VDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLG 323 (729)
Q Consensus 245 A~~~gvdVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~ 323 (729)
|+++|+||||||||+.. ..++.+++++++++|+++||+||+||||+|+...++++.+||+++|++++.+|.|...+.++
T Consensus 152 a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~ 231 (621)
T 3vta_A 152 AIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIG 231 (621)
T ss_dssp HHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEET
T ss_pred HHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEec
Confidence 99999999999999765 34667889999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEeeeecCCCCCCceeeEEEcC-------------Cccccccc-ccCCceEEEEccCCCchhhHHHHHHhCCceEE
Q 004809 324 NGNTVTGLSLYPGNSSLIDFPIVFMD-------------ECLNLAEL-KKVGQKIVVCQDKNDSLSNQVDNIQNASVSGG 389 (729)
Q Consensus 324 ~g~~~~g~~~~~~~~~~~~~~lv~~~-------------~c~~~~~~-~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~ 389 (729)
++..+.+.+++... ...+++++.. .|.+.+++ .+++|||++|.++. ..+..+.+.+|+.++
T Consensus 232 ~~~~~~~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~---~~~~~~~~~~Ga~gv 306 (621)
T 3vta_A 232 NGQSFQGVSINTFD--NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF---GPHEFFKSLDGAAGV 306 (621)
T ss_dssp TSCEEEEBCCCCSC--CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCC---CHHHHHHHHTTCSEE
T ss_pred cCceeeeeecccCC--CcccccccccccccccccccccccccccccccccccceEEEEecCC---ChhHHhhhhcceeEE
Confidence 99999998876543 3456666543 38888888 89999999998764 456677888999999
Q ss_pred EEEecCCCceeecc-ccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcE
Q 004809 390 VFISDFDGLEFFLQ-SSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDV 468 (729)
Q Consensus 390 i~~~~~~~~~~~~~-~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI 468 (729)
|++++..+ ..+ +.+|...++..++..++.|+.....+.+.+....+ +....++.++.||||||+....++|||||
T Consensus 307 i~~~~~~~---~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~-~~~~~~~~va~FSSrGP~~~~~~ilKPDI 382 (621)
T 3vta_A 307 LMTSNTRD---YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTT-ILNASAPVVVSFSSRGPNRATKDVIKPDI 382 (621)
T ss_dssp EEECSCCS---SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEE-EECTTCCCBCTTSCCCSCTTCTTSCSCCE
T ss_pred EEEecCCC---cccccccceEEECHHHHHHHHHHHhccCCcceEEecceE-eccCCCCceeeecCCCCCCCCCCeecccc
Confidence 99988432 234 88999999999999999999999998888755444 44567899999999999988888999999
Q ss_pred EecCCCEEeecCCCCCccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcc
Q 004809 469 MAPGDSILAAWPSNLAVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIK 548 (729)
Q Consensus 469 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~ 548 (729)
+|||++|+|+|+....... ..+...|..+||||||||||||+||||||+||+|+|++||++||+||++++..
T Consensus 383 ~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~----- 454 (621)
T 3vta_A 383 SGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNAR----- 454 (621)
T ss_dssp EEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTT-----
T ss_pred ccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCccccc-----
Confidence 9999999999986543322 23457899999999999999999999999999999999999999999988654
Q ss_pred cCCCCCCCCCCCCCCccccCccCcCCCCccccCChhhHHHHhhhcCCCccceeEeccccccccCC----CCCCCCCCcee
Q 004809 549 DIGDDNKPATPIAMGAGHINPDKALDPGLIYDATTEDYVSLLCALNLTMKRIQTITRSYSVNCST----SSLDLNYPSFI 624 (729)
Q Consensus 549 ~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~c~~----~~~~lN~ps~~ 624 (729)
..+..+|+||+|+|||.+|++||||||++.+||+.|||+++|+..+++.+++. ...|+. ...+||||||+
T Consensus 455 -----~~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lN~pS~~ 528 (621)
T 3vta_A 455 -----FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGD-YSACTSGNTGRVWDLNYPSFG 528 (621)
T ss_dssp -----TCTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC------------------------------CGGGSCCSSEE
T ss_pred -----CCCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeecc-ccccCCCCcCcccccccccEE
Confidence 34567899999999999999999999999999999999999999999999987 667764 46799999999
Q ss_pred eeeccCCCceeEEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEecCCCCCCCeeEEEEEE
Q 004809 625 AFFNANESKSVQEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQMDEETVVAFCYLS 704 (729)
Q Consensus 625 ~~~~~~~~~~~~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~l~ 704 (729)
+.+.... ..+++|+|||||||+..+||++++++|+|++|+|+|++|+|++.+|+++|+|||+... . +. |+||+|+
T Consensus 529 v~~~~~~-~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~~--~-~~-~~~g~l~ 603 (621)
T 3vta_A 529 LSVSPSQ-TFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI--K-GF-VVSASLV 603 (621)
T ss_dssp EECCSSC-CEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEECC--C-SS-EEEEEEE
T ss_pred EEccCCC-ceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEecC--C-Cc-eEEEEEE
Confidence 9765333 4789999999999999999999999999999999999999998999999999998642 2 55 9999999
Q ss_pred EEEcCCceEEEEEEEEEe
Q 004809 705 WIETGGKHVVKSPIVVTS 722 (729)
Q Consensus 705 ~~~~~~~~~v~~P~~~~~ 722 (729)
|+ |++|.||+||+|+.
T Consensus 604 w~--d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 604 WS--DGVHYVRSPITITS 619 (621)
T ss_dssp EE--CSSCCCEEEEEEEC
T ss_pred EE--cCCEEEEeCEEEEE
Confidence 99 99999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=8.7e-86 Score=794.40 Aligned_cols=539 Identities=22% Similarity=0.283 Sum_probs=430.5
Q ss_pred CCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCcc----------CcccCCCeeeceeecccc
Q 004809 97 KSGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQF----------NSSLCNKKLIGARFFNKG 166 (729)
Q Consensus 97 ~~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f----------~~~~~n~kiig~~~~~~~ 166 (729)
++.+|.++++|+||+|||||||||++||+|.+ +..|++.|..+..| ...+||+|++++++|.++
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 35689999999999999999999999999985 34677777654332 134799999999998754
Q ss_pred ccccCCCCccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC--CChHHHHHHHHH
Q 004809 167 LLAKNPTITIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG--SFTSDIIAAIDQ 244 (729)
Q Consensus 167 ~~~~~~~~~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~il~ai~~ 244 (729)
. ...|..||||||||||||+.+.+.+. .+.+.||||+|+|++||+|+..+ +..+++++||++
T Consensus 80 ~------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~ 143 (926)
T 1xf1_A 80 G------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRD 143 (926)
T ss_dssp S------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred C------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHH
Confidence 2 12288999999999999997654332 23468999999999999999876 566789999999
Q ss_pred HHHcCCcEEEeecCCCC--CCCCCcHHHHHHHHHHhCCcEEEEecCCCCCC-------------CCCcC--CCCCceEEE
Q 004809 245 AIIDGVDVLSMSLGLDG--VDLYEDPVAIATFAAIEKNIFVSTSAGNQGPF-------------IGTLH--NGIPWVMTV 307 (729)
Q Consensus 245 A~~~gvdVIn~SlG~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------------~~t~~--~~~p~vitV 307 (729)
|+++|+||||||||... ...+.+.+..++++|+++||+||+||||+|+. ..++. +.+||+|+|
T Consensus 144 Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitV 223 (926)
T 1xf1_A 144 AINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTV 223 (926)
T ss_dssp HHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEE
T ss_pred HHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEE
Confidence 99999999999999764 23456788889999999999999999999963 22333 348999999
Q ss_pred cccccCccccEEEEe-CCCcEEEeeeecCCC--CCCceeeEEEcCC-cccccccccCCceEEEEccCCCchhhHHHHHHh
Q 004809 308 AAGTMDRELGATLTL-GNGNTVTGLSLYPGN--SSLIDFPIVFMDE-CLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQN 383 (729)
Q Consensus 308 gAst~d~~~~~~~~l-~~g~~~~g~~~~~~~--~~~~~~~lv~~~~-c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~ 383 (729)
||++.++.+...+.+ +++....+.+++... .....+++++... |.+..+ .+++||||+|+|+.|.+.+|..++++
T Consensus 224 gA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~g~~~~~~-~~v~Gkivl~~rg~~~~~~k~~~~~~ 302 (926)
T 1xf1_A 224 ASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDF-KDVKGKIALIERGDIDFKDKIAKAKK 302 (926)
T ss_dssp EEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTTSCSTTTT-TTCTTSEEEEECCSSCHHHHHHHHHH
T ss_pred eccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCCCCCccch-hhcCCeEEEEECCCCCHHHHHHHHHh
Confidence 999999999988888 666555555554322 2467899999864 765555 79999999999999999999999999
Q ss_pred CCceEEEEEecCCCc-eeec-c-ccccEEEechhhHHHHHHHHhhcCCcEEEEEeccee--ecCCCCCceecccCCCCCC
Q 004809 384 ASVSGGVFISDFDGL-EFFL-Q-SSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTE--LGTKPAPSVASYSSRGPSI 458 (729)
Q Consensus 384 ~Ga~g~i~~~~~~~~-~~~~-~-~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~a~FSS~GP~~ 458 (729)
+|++|+|++|+..+. .... . ..+|++.|+..+|..|.. .+.++|.+..+. +.....+.++.||||||+.
T Consensus 303 ~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~ 376 (926)
T 1xf1_A 303 AGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLPTASGTKLSRFSSWGLTA 376 (926)
T ss_dssp TTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEECSSCSBCCTTSCCCBCT
T ss_pred CCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecccCCcceeccccCCCCCC
Confidence 999999999984332 2222 2 889999999999988763 345566666554 5566788999999999997
Q ss_pred CCCCCccCcEEecCCCEEeecCCCCCccccCCCCCCCCceeeccccchhHHHHHHHHHHH----hhCCCCCHHH----HH
Q 004809 459 SCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLR----GAHPEWSPAA----IR 530 (729)
Q Consensus 459 ~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~----q~~P~~sp~~----Ik 530 (729)
+. +|||||+|||++|+++++. +.|..+||||||||||||+||||+ +.||+|+|+| ||
T Consensus 377 ~~--~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Ik 441 (926)
T 1xf1_A 377 DG--NIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAK 441 (926)
T ss_dssp TS--CBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHH
T ss_pred CC--ccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 64 5999999999999999984 479999999999999999999995 5699999997 99
Q ss_pred HHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCcCCCCccccCChhhHHHHhhhcCCCccceeEeccccccc
Q 004809 531 SAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKALDPGLIYDATTEDYVSLLCALNLTMKRIQTITRSYSVN 610 (729)
Q Consensus 531 ~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~ 610 (729)
++||+||+++...+. ...+++++||+|+||+.+|++|.+ |||..+++..+
T Consensus 442 s~L~~TA~~~~~~~~--------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~----------- 491 (926)
T 1xf1_A 442 KVLMSSATALYDEDE--------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSSK----------- 491 (926)
T ss_dssp HHHHHHSBCCEEGGG--------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCSC-----------
T ss_pred HHHHhcCCCcccCCC--------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcce-----------
Confidence 999999998754210 234578899999999999999854 67877654322
Q ss_pred cCCCCCCCCCCceeeeeccCCCceeEEEEEEEEecCCC--CeEEEEEEEe--CCCcEEEEecCeEEEccC-------CeE
Q 004809 611 CSTSSLDLNYPSFIAFFNANESKSVQEFQRTVTNVGEG--VSTYTASVTP--LKGFNFSVDPDKLTFKGK-------YAK 679 (729)
Q Consensus 611 c~~~~~~lN~ps~~~~~~~~~~~~~~~~~rtvtnvg~~--~~tY~~~v~~--p~g~~v~v~p~~l~~~~~-------~~~ 679 (729)
|.+... ..+++++|||||+|+. ..+|++++.. |.+..++|.|..|.|..+ ||+
T Consensus 492 ------------i~l~~~----~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~ 555 (926)
T 1xf1_A 492 ------------VHLNNV----SDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSS 555 (926)
T ss_dssp ------------EEEEEE----CSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEE
T ss_pred ------------eecccc----CccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCE
Confidence 222211 1468899999999985 4678888775 789999999988877654 999
Q ss_pred EEEEEEEEecC-------CCCCCCeeEEEEEEEEEcCCceE-EEEEEEEEecCcC
Q 004809 680 QSYKLRIEGPN-------QMDEETVVAFCYLSWIETGGKHV-VKSPIVVTSLGTE 726 (729)
Q Consensus 680 ~~~~vt~~~~~-------~~~~~~~~~~G~l~~~~~~~~~~-v~~P~~~~~~~~~ 726 (729)
++|+|||+.+. ...++. |+||+|+|++.++.|. ||+||+++.+++.
T Consensus 556 ~~~~vt~~~~~~~~~~~~~~~~~~-~~~G~i~~~~~~~~~~~v~~P~~~~~g~~~ 609 (926)
T 1xf1_A 556 KQVTVPIDASRFSKDLLAQMKNGY-FLEGFVRFKQDPTKEELMSIPYIGFRGDFG 609 (926)
T ss_dssp EEEEEEEECHHHHHHHHHHSTTCE-EEEEEEEEESSTTSCCCEEEEEEEEESCGG
T ss_pred EEEEEEEEcCccchhhcccccCCc-EEEEEEEEEeCCCCCCEEEeeeEEEecCcc
Confidence 99999999751 122244 8999999995566664 9999999999875
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=7.3e-60 Score=537.44 Aligned_cols=340 Identities=32% Similarity=0.456 Sum_probs=275.8
Q ss_pred CCceEEEecceeeEEEEEeCHHHHHHh-----------hcCCCeEEEEcCCccCCCCCCC--CcccCCCCCCCCCcCCCC
Q 004809 40 SSKLLYTYSHVLNGFSASLTPAELEAL-----------KSSPGYISSIRDLPVKPHTTHS--SQFLGLNPKSGAWPVSKF 106 (729)
Q Consensus 40 ~~~~~~~y~~~~ng~s~~l~~~~~~~L-----------~~~p~V~~V~~~~~~~~~~~~s--~~~~gl~~~~~~w~~~~~ 106 (729)
..+++|+|+ .||||+++++.+++++| +++|+|++|+++..+++..... ...+...+...+|..+++
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYD 137 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCC
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCC
Confidence 468999997 79999999999999999 8999999999999887753321 111222234679999999
Q ss_pred CCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccCCCCCCCCCC
Q 004809 107 GKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIAMNSPRDANG 186 (729)
Q Consensus 107 G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~D~~g 186 (729)
|+||+|||||||||++||+|.++ +++.++|..+. ..+.|..|
T Consensus 138 G~gv~VaViDtGid~~Hpdl~~~---------------------------i~~~~d~~~~~-----------~~~~D~~g 179 (539)
T 3afg_A 138 GSGITIGIIDTGIDASHPDLQGK---------------------------VIGWVDFVNGK-----------TTPYDDNG 179 (539)
T ss_dssp CTTCEEEEEESBCCTTSGGGTTT---------------------------EEEEEETTTCC-----------SSCCBSSS
T ss_pred CCCcEEEEEecCCCCCChHHhCC---------------------------EeeeEECCCCC-----------CCCCCCCC
Confidence 99999999999999999999753 55556665431 24678899
Q ss_pred ChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHc----CCcEEEeecCCCC
Q 004809 187 HGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIID----GVDVLSMSLGLDG 261 (729)
Q Consensus 187 HGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~----gvdVIn~SlG~~~ 261 (729)
|||||||||||+.... .|.+.||||+|+|+++|+|+..| ++.+++++||+||+++ |++|||||||...
T Consensus 180 HGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~ 252 (539)
T 3afg_A 180 HGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ 252 (539)
T ss_dssp HHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS
T ss_pred CHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC
Confidence 9999999999974321 23358999999999999998877 7889999999999975 8999999999866
Q ss_pred CCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC--CcCCCCCceEEEcccccCccccEEEEeCCCcEEEeeeecCCCCC
Q 004809 262 VDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIG--TLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSLYPGNSS 339 (729)
Q Consensus 262 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~--t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~ 339 (729)
.....+.+..++.+|.++|++||+||||+|+... ..++..+++|+|||++.
T Consensus 253 ~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~--------------------------- 305 (539)
T 3afg_A 253 SSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK--------------------------- 305 (539)
T ss_dssp CCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT---------------------------
T ss_pred CCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC---------------------------
Confidence 5556788999999999999999999999997644 34677899999998531
Q ss_pred CceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEechhhHHHH
Q 004809 340 LIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNSKTGDIL 419 (729)
Q Consensus 340 ~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l 419 (729)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCCCCCcee
Q 004809 420 KDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLSFSNFNL 499 (729)
Q Consensus 420 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~ 499 (729)
...++.||||||+.+.+ +||||+|||++|+++++..... .+.....|..
T Consensus 306 -------------------------~~~~a~fSs~Gp~~~~~--~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~ 354 (539)
T 3afg_A 306 -------------------------YDVITDFSSRGPTADNR--LKPEVVAPGNWIIAARASGTSM----GQPINDYYTA 354 (539)
T ss_dssp -------------------------TSCBCSSSCCCCCTTCB--CCCSEEEECSSEEEECCTTCCC----SEECSSSEEE
T ss_pred -------------------------CcccccccCCCCCCCCC--CcccEecCcCCEEeeccCCCCC----CCCCcccccc
Confidence 12578999999998755 9999999999999999753211 0111246999
Q ss_pred eccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCcCCC
Q 004809 500 QSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKALDP 575 (729)
Q Consensus 500 ~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 575 (729)
++|||||||||||++|||+|+||+|+|++||++|++||+++...+ .+++.||+|+||+.+|++.
T Consensus 355 ~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~------------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 355 APGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE------------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG------------CSBTTTBTCBCCHHHHHTG
T ss_pred cCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC------------CCccCccCCccCHHHHhhh
Confidence 999999999999999999999999999999999999999774311 2456899999999999984
No 5
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=1.8e-55 Score=497.27 Aligned_cols=333 Identities=23% Similarity=0.274 Sum_probs=263.5
Q ss_pred CCceEEEecceeeEEEEEeCHHHHHHhhc-CCCeEEEEcCCccCCCCCCCC----------cccCCCC---CCCCCcCCC
Q 004809 40 SSKLLYTYSHVLNGFSASLTPAELEALKS-SPGYISSIRDLPVKPHTTHSS----------QFLGLNP---KSGAWPVSK 105 (729)
Q Consensus 40 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~-~p~V~~V~~~~~~~~~~~~s~----------~~~gl~~---~~~~w~~~~ 105 (729)
..+++++|. .|++|+++++++++++|++ +|+|++|++++.++++..... ..|++.. ...+|..++
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~ 143 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLP 143 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCC
T ss_pred CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhccC
Confidence 567888996 5999999999999999999 999999999998887644321 1233332 235899999
Q ss_pred CCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccCCCCCCCCC
Q 004809 106 FGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIAMNSPRDAN 185 (729)
Q Consensus 106 ~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~D~~ 185 (729)
+|+||+|||||||||++||+|.++- |.+. ..++....|... ......+...+.|..
T Consensus 144 ~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~-------------~~~~~~~~~~~~----~~~~~~~~~~~~d~~ 199 (471)
T 3t41_A 144 KHANTKIAIIDTGVMKNHDDLKNNF-------STDS-------------KNLVPLNGFRGT----EPEETGDVHDVNDRK 199 (471)
T ss_dssp SSCCCCEEEEESCCCTTCTTTTTTB-------CTTC-------------EECCCTTCGGGC----CTTCCCCTTCCCCSS
T ss_pred CCCCcEEEEEeCCCCCCChhHhcCc-------ccCC-------------cccccCCCccCC----CcccCCCCCCCcCCC
Confidence 9999999999999999999998741 1110 011111111111 011112223577899
Q ss_pred CChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCCChHHHHHHHHHHHHcCCcEEEeecCCCCC-C-
Q 004809 186 GHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGSFTSDIIAAIDQAIIDGVDVLSMSLGLDGV-D- 263 (729)
Q Consensus 186 gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~A~~~gvdVIn~SlG~~~~-~- 263 (729)
||||||||||||+.. +.||||+|+|+.+|+++...+..+++++||++|+++|++|||||||.... .
T Consensus 200 gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~ 267 (471)
T 3t41_A 200 GHGTMVSGQTSANGK------------LIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDK 267 (471)
T ss_dssp SHHHHHHHHHHCBSS------------SBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECT
T ss_pred CccchhhheeecCCc------------eeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCcc
Confidence 999999999998631 47999999999999998866899999999999999999999999997321 0
Q ss_pred -----------CCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC------------------CcCCCCCceEEEcccccCc
Q 004809 264 -----------LYEDPVAIATFAAIEKNIFVSTSAGNQGPFIG------------------TLHNGIPWVMTVAAGTMDR 314 (729)
Q Consensus 264 -----------~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~------------------t~~~~~p~vitVgAst~d~ 314 (729)
...+.+..++..+.++|++||+||||+|.... ..++..+++|+|||++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~-- 345 (471)
T 3t41_A 268 NDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ-- 345 (471)
T ss_dssp TCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT--
T ss_pred ccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCC--
Confidence 12356777888889999999999999997643 25678899999998542
Q ss_pred cccEEEEeCCCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEec
Q 004809 315 ELGATLTLGNGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISD 394 (729)
Q Consensus 315 ~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~ 394 (729)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceeeccccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCC
Q 004809 395 FDGLEFFLQSSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDS 474 (729)
Q Consensus 395 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~ 474 (729)
.+.++.||++||+. |||+|||++
T Consensus 346 --------------------------------------------------~~~~a~fS~~G~~~-------~di~APG~~ 368 (471)
T 3t41_A 346 --------------------------------------------------KSNLSEFSNFGMNY-------TDIAAPGGS 368 (471)
T ss_dssp --------------------------------------------------TSSBCTTCCBCTTT-------CCEEEECCC
T ss_pred --------------------------------------------------CCCCCCccCCCCCC-------CeEEecCCC
Confidence 12578999999964 699999987
Q ss_pred ----------------------EEeecCCCCCccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCC-CCCHHHHHH
Q 004809 475 ----------------------ILAAWPSNLAVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHP-EWSPAAIRS 531 (729)
Q Consensus 475 ----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P-~~sp~~Ik~ 531 (729)
|+++++. +.|..++|||||||||||++|||+|++| .|+|++||+
T Consensus 369 i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~ 435 (471)
T 3t41_A 369 FAYLNQFGVDKWMNEGYMHKENILTTANN-------------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIE 435 (471)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHH
T ss_pred cccccccccccccccccccCceeEecCCC-------------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHH
Confidence 8888864 4799999999999999999999999999 899999999
Q ss_pred HHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCcCCC
Q 004809 532 AIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKALDP 575 (729)
Q Consensus 532 ~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 575 (729)
+|++||.+... .++..||+|+||+.+|++.
T Consensus 436 ~L~~tA~~~~~--------------~~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 436 LLYQHGTSKNN--------------KPFSRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHHHSBCCSC--------------CCHHHHTTCBBCHHHHTTT
T ss_pred HHHHhCCCCCC--------------CCcCccccChhCHHHHHHH
Confidence 99999997632 3556899999999999984
No 6
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=2.6e-56 Score=492.13 Aligned_cols=321 Identities=26% Similarity=0.375 Sum_probs=262.1
Q ss_pred CCceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEcCCccCCCCCCC-----------CcccCCCC--CCCCCcCCCC
Q 004809 40 SSKLLYTYSHVLNGFSASLTPAELEALKSSPGYISSIRDLPVKPHTTHS-----------SQFLGLNP--KSGAWPVSKF 106 (729)
Q Consensus 40 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s-----------~~~~gl~~--~~~~w~~~~~ 106 (729)
..+++++|. .|++|+++++++++++|+++|+|++|++++.++++.... ...|++.. .+.+|..+ +
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~ 100 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-D 100 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-S
T ss_pred CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-C
Confidence 568999998 499999999999999999999999999999887643211 11233332 35689988 9
Q ss_pred CCC--cEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccCCCCCCCC
Q 004809 107 GKD--IIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIAMNSPRDA 184 (729)
Q Consensus 107 G~g--vvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~D~ 184 (729)
|+| |+|||||||||++||+|.++ ++..++|..+... ....++.|.
T Consensus 101 G~g~~v~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~------~~~~~~~d~ 147 (395)
T 2z2z_A 101 GSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS------TKLRDCADQ 147 (395)
T ss_dssp SCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB------CCHHHHBCS
T ss_pred CCCCcEEEEEEcCCCCCCChhHhhc---------------------------cccCccccCCccc------CCCCCCCCC
Confidence 999 99999999999999999753 2333334332100 000124678
Q ss_pred CCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHc---------------
Q 004809 185 NGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIID--------------- 248 (729)
Q Consensus 185 ~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~--------------- 248 (729)
.||||||||||||.. +..| +.||||+|+|+.+|+++..| ++.+++++||+||+++
T Consensus 148 ~gHGT~vAgiia~~~----n~~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~ 218 (395)
T 2z2z_A 148 NGHGTHVIGTIAALN----NDIG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAG 218 (395)
T ss_dssp SSHHHHHHHHHHCCC----SSSS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTT
T ss_pred CCCHHHHHHHHHeec----CCCc-----eEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccc
Confidence 999999999999972 1122 37999999999999998877 7888999999999988
Q ss_pred -----CCcEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeC
Q 004809 249 -----GVDVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLG 323 (729)
Q Consensus 249 -----gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~ 323 (729)
+++|||||||... ....+..++.+|.++|++||+||||+|......++..|++|+|||++.
T Consensus 219 ~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----------- 284 (395)
T 2z2z_A 219 DPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS----------- 284 (395)
T ss_dssp CTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-----------
T ss_pred cccCCCCeEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC-----------
Confidence 9999999999753 245677777888999999999999999877788889999999999542
Q ss_pred CCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeecc
Q 004809 324 NGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQ 403 (729)
Q Consensus 324 ~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~ 403 (729)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCC
Q 004809 404 SSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNL 483 (729)
Q Consensus 404 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~ 483 (729)
.+.++.||++|| +|+|||++|+++++.
T Consensus 285 -----------------------------------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~-- 311 (395)
T 2z2z_A 285 -----------------------------------------NDNIASFSNRQP----------EVSAPGVDILSTYPD-- 311 (395)
T ss_dssp -----------------------------------------TSCBCTTSCSSC----------SEEEECSSEEEEETT--
T ss_pred -----------------------------------------CCCCCcccCCCC----------CEEeCCCCeeeecCC--
Confidence 135789999997 679999999999874
Q ss_pred CccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCC-------------CCCHHHHHHHHHhccccCCCCCCCcccC
Q 004809 484 AVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHP-------------EWSPAAIRSAIMTTSDSTDNTNSDIKDI 550 (729)
Q Consensus 484 ~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P-------------~~sp~~Ik~~L~~TA~~~~~~~~~~~~~ 550 (729)
+.|..++|||||||||||++|||+|++| .|++.+||++|++||+++...
T Consensus 312 -----------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~------- 373 (395)
T 2z2z_A 312 -----------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT------- 373 (395)
T ss_dssp -----------TEEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS-------
T ss_pred -----------CceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC-------
Confidence 4799999999999999999999999999 999999999999999987432
Q ss_pred CCCCCCCCCCCCCccccCccCcCCC
Q 004809 551 GDDNKPATPIAMGAGHINPDKALDP 575 (729)
Q Consensus 551 ~~~~~~~~~~~~G~G~vn~~~Al~~ 575 (729)
..+..||+|+||+.+|++.
T Consensus 374 ------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 374 ------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp ------SSBTTTBTCBCCHHHHHHH
T ss_pred ------CCCCCccCceeCHHHHHHH
Confidence 2457899999999999863
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=3.6e-55 Score=489.85 Aligned_cols=366 Identities=25% Similarity=0.331 Sum_probs=270.9
Q ss_pred CCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCcc
Q 004809 97 KSGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITI 176 (729)
Q Consensus 97 ~~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 176 (729)
.+.+|..+ |+||+|+|||||||++||+|.++ .|.+ +++... .
T Consensus 13 ~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-------~~~~--------------------~~~~~~---------~ 54 (441)
T 1y9z_A 13 ATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-------NVTG--------------------TNNSGT---------G 54 (441)
T ss_dssp CSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-------EEEE--------------------CCCTTS---------C
T ss_pred hhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-------cccC--------------------cccCCC---------C
Confidence 35688865 77999999999999999999864 1111 111100 0
Q ss_pred CCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCC--EEEEEEeecCCC-CChHHHHHHHHHHHHc-CCcE
Q 004809 177 AMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLA--RVAMYKALWNEG-SFTSDIIAAIDQAIID-GVDV 252 (729)
Q Consensus 177 ~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~il~ai~~A~~~-gvdV 252 (729)
+...+.|..||||||||||+|... ..| +.||||+| +|+.+|+++..+ ++.+++++||+||+++ |++|
T Consensus 55 ~~~~~~d~~gHGT~vAgiia~~~~----~~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~V 125 (441)
T 1y9z_A 55 NWYQPGNNNAHGTHVAGTIAAIAN----NEG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANV 125 (441)
T ss_dssp CTTCCCSSCCHHHHHHHHHHCCCS----SSB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSE
T ss_pred CCCCCCCCCCcHHHHHHHHhcccC----CCC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcE
Confidence 112467889999999999999742 123 38999995 999999999877 8888999999999999 9999
Q ss_pred EEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccE--------------
Q 004809 253 LSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGA-------------- 318 (729)
Q Consensus 253 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~-------------- 318 (729)
||||||.... ...+..++.+|.++|++||+||||+|......++..+++|+|||++.+.....
T Consensus 126 in~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG 202 (441)
T 1y9z_A 126 VTMSLGGSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPG 202 (441)
T ss_dssp EEECCCBSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEEC
T ss_pred EEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEecc
Confidence 9999997532 34566777889999999999999999887788889999999999987643211
Q ss_pred -----EEEeCCCc----EEEeeeecCCCC-C-Cceee--EEE------------cCCcccc--ccc-ccCCceEEEEccC
Q 004809 319 -----TLTLGNGN----TVTGLSLYPGNS-S-LIDFP--IVF------------MDECLNL--AEL-KKVGQKIVVCQDK 370 (729)
Q Consensus 319 -----~~~l~~g~----~~~g~~~~~~~~-~-~~~~~--lv~------------~~~c~~~--~~~-~~~~gkiv~~~~g 370 (729)
....+++. ++.|.+++.... + ...++ +.| ...|... .++ .+++|||++|+|+
T Consensus 203 ~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg 282 (441)
T 1y9z_A 203 EAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERV 282 (441)
T ss_dssp SSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECC
T ss_pred CCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEecc
Confidence 11112221 233333332111 0 00000 001 1237654 445 8899999999998
Q ss_pred CC-----chhhHHHHHHhCCceEEEEEecCC--Cc--eee---cc-ccccEEEechhhHHHHHHHHhhcCCcEEEEEecc
Q 004809 371 ND-----SLSNQVDNIQNASVSGGVFISDFD--GL--EFF---LQ-SSFPAVFMNSKTGDILKDYIKIENNATATIQFQK 437 (729)
Q Consensus 371 ~~-----~~~~~~~~~~~~Ga~g~i~~~~~~--~~--~~~---~~-~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 437 (729)
.+ .+.+|..+++++|+.|+|++++.. +. ... .. +.+|.+.|+..+|+.|++|+... .
T Consensus 283 ~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~------ 352 (441)
T 1y9z_A 283 GNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----T------ 352 (441)
T ss_dssp SCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----E------
T ss_pred ccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----c------
Confidence 76 788999999999999999999832 21 111 12 78999999999999999886321 0
Q ss_pred eeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCCCCCceeeccccchhHHHHHHHHHH
Q 004809 438 TELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALL 517 (729)
Q Consensus 438 ~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl 517 (729)
.+ +... ...|..++|||||||||||++|||
T Consensus 353 -----------------------------t~--------~~~~-------------~~~y~~~sGTSmAaP~VAG~aALl 382 (441)
T 1y9z_A 353 -----------------------------TV--------SNQG-------------NQDYEYYNGTSMATPHVSGVATLV 382 (441)
T ss_dssp -----------------------------EE--------EEEE-------------EESEEEECSHHHHHHHHHHHHHHH
T ss_pred -----------------------------cc--------cccc-------------CCCceeecccccCCcccchHHHHH
Confidence 00 0111 257999999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCcCCCCccccCChhhHHHHhhhcCCC
Q 004809 518 RGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKALDPGLIYDATTEDYVSLLCALNLT 596 (729)
Q Consensus 518 ~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~ 596 (729)
+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+ ||+.|||++++.
T Consensus 383 ~~~~p~~sp~~ik~~L~~TA~~~~~~g-------------~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~ 437 (441)
T 1y9z_A 383 WSYHPECSASQVRAALNATADDLSVAG-------------RDNQTGYGMINAVAAK-----------AYLDESCTGPTD 437 (441)
T ss_dssp HHHCTTSCHHHHHHHHHHHSBCCSSSS-------------CBTTTBTCBCCHHHHH-----------HHHHHCTTCC--
T ss_pred HHHCCCCCHHHHHHHHHhhchhhccCC-------------CcccccccccCHHHHH-----------HHHHhhhcCCCC
Confidence 999999999999999999999875432 3568999999999996 499999998763
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=3.6e-52 Score=479.75 Aligned_cols=350 Identities=25% Similarity=0.274 Sum_probs=259.5
Q ss_pred CCceEEEecceeeEEEEEeCH---HH-HHHhhc--CCCeEEEEcCCccCCCC----CC----------------------
Q 004809 40 SSKLLYTYSHVLNGFSASLTP---AE-LEALKS--SPGYISSIRDLPVKPHT----TH---------------------- 87 (729)
Q Consensus 40 ~~~~~~~y~~~~ng~s~~l~~---~~-~~~L~~--~p~V~~V~~~~~~~~~~----~~---------------------- 87 (729)
..++++++. .+++++++++. ++ +++|++ +|+|++|||+..+++.. ..
T Consensus 52 g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (671)
T 1r6v_A 52 NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEE 130 (671)
T ss_dssp TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSST
T ss_pred CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCccccccccccccccccccccccc
Confidence 356788887 68999999864 33 566764 89999999997765431 00
Q ss_pred -CCcccCCCC--CCCC-CcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeec
Q 004809 88 -SSQFLGLNP--KSGA-WPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFF 163 (729)
Q Consensus 88 -s~~~~gl~~--~~~~-w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~ 163 (729)
....|++.. ...+ |.. ++|+||+|||||||||++||+|.++- +. +...+
T Consensus 131 ~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~-------~~-------------------g~~~~ 183 (671)
T 1r6v_A 131 LSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQV-------IA-------------------GYRPA 183 (671)
T ss_dssp TGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTTB-------CC-------------------EEEGG
T ss_pred ccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCccccccE-------Ee-------------------ccccc
Confidence 001233322 2345 887 89999999999999999999998641 11 11111
Q ss_pred cccccccCCCCccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecC------CC-CChH
Q 004809 164 NKGLLAKNPTITIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWN------EG-SFTS 236 (729)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~ 236 (729)
.+... + ...+..|.+||||||||||||.. +..| +.||||+|+|+.+|+++. .+ ...+
T Consensus 184 ~~~~~------p-~~~d~~d~~gHGThVAGiIAa~~----ng~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~ 247 (671)
T 1r6v_A 184 FDEEL------P-AGTDSSYGGSAGTHVAGTIAAKK----DGKG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDD 247 (671)
T ss_dssp GTEEE------C-TTCBCCTTCSHHHHHHHHHHCCC----SSSS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHH
T ss_pred CCCcC------C-CCCCCccCCCcchhhhhhhhccC----CCCc-----eEEECCCCEEEEEEeccCccccCCCCccCHH
Confidence 11100 0 00124467899999999999973 1123 379999999999999976 23 4456
Q ss_pred HHHHHHHHHHHcCCcEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC-CCcCCCCCceEEEcccccCcc
Q 004809 237 DIIAAIDQAIIDGVDVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFI-GTLHNGIPWVMTVAAGTMDRE 315 (729)
Q Consensus 237 ~il~ai~~A~~~gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~t~~~~~p~vitVgAst~d~~ 315 (729)
.+++||+||+++|++|||||||... +...+..++..|.++|++||+||||+|... ...++..|++|+|||++.+..
T Consensus 248 ~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~ 324 (671)
T 1r6v_A 248 YVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG 324 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC
Confidence 7899999999999999999999743 356778888899999999999999999764 566788899999999642210
Q ss_pred ccEEEEeCCCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecC
Q 004809 316 LGATLTLGNGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDF 395 (729)
Q Consensus 316 ~~~~~~l~~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~ 395 (729)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceeeccccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCE
Q 004809 396 DGLEFFLQSSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSI 475 (729)
Q Consensus 396 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I 475 (729)
...++.||++||.. ||+|||++|
T Consensus 325 -------------------------------------------------~~~~a~fSn~G~~v--------dv~APG~~I 347 (671)
T 1r6v_A 325 -------------------------------------------------TFRVAGFSSRSDGV--------SVGAPGVTI 347 (671)
T ss_dssp -------------------------------------------------EEEECSSSCCCTTE--------EEEEECSSE
T ss_pred -------------------------------------------------ceeeccccCCCCCe--------eEEecCCCE
Confidence 01478999999864 999999999
Q ss_pred EeecCCCCCcc-----ccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccC
Q 004809 476 LAAWPSNLAVS-----QTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDI 550 (729)
Q Consensus 476 ~sa~~~~~~~~-----~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~ 550 (729)
+++++...... ........+.|..++|||||||||||++|||+|++|+|+|.+||++|++||+++...
T Consensus 348 ~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~------- 420 (671)
T 1r6v_A 348 LSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN------- 420 (671)
T ss_dssp EEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS-------
T ss_pred EeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC-------
Confidence 99987532110 000111235799999999999999999999999999999999999999999987432
Q ss_pred CCCCCCCCCCCCCccccCccCcCCCCccccCChhhH
Q 004809 551 GDDNKPATPIAMGAGHINPDKALDPGLIYDATTEDY 586 (729)
Q Consensus 551 ~~~~~~~~~~~~G~G~vn~~~Al~~glv~d~~~~dy 586 (729)
..+..||+|+||+.+|++..|..+....||
T Consensus 421 ------g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 421 ------GWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp ------SCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred ------CCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 245689999999999999877766554443
No 9
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.1e-54 Score=495.19 Aligned_cols=302 Identities=22% Similarity=0.220 Sum_probs=41.2
Q ss_pred CCceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEcCCccCCCCCCCCcccCCCCC------CCCCcCCCCCCCcEEE
Q 004809 40 SSKLLYTYSHVLNGFSASLTPAELEALKSSPGYISSIRDLPVKPHTTHSSQFLGLNPK------SGAWPVSKFGKDIIIG 113 (729)
Q Consensus 40 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s~~~~gl~~~------~~~w~~~~~G~gvvVg 113 (729)
..++++.|++.|+||+++++++++++|+++|+|++|+|++.++.+. .. |++.++ ...|..+.+|+||+|+
T Consensus 108 ~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~~-~p---WgL~~i~~~~~~~~~w~~~~~G~GV~Va 183 (692)
T 2p4e_P 108 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQS-IP---WNLERITPPRYRADEYQPPDGGSLVEVY 183 (692)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC-----------------------------------
T ss_pred ccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccCC-CC---cchhhcccccccccccccCCCCCCcEEE
Confidence 4689999999999999999999999999999999999999776522 22 444432 2368888999999999
Q ss_pred EEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccCCCCCCCCCCChhHHHH
Q 004809 114 VVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIAMNSPRDANGHGTHTSS 193 (729)
Q Consensus 114 VIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAg 193 (729)
|||||||++||+|.++-. |. +|. .+.+. ++ ......+.|.+||||||||
T Consensus 184 VIDTGId~~HpdL~gr~~------~~-------~~~------------~~~d~----dg--~~~~~~~~D~~GHGTHVAG 232 (692)
T 2p4e_P 184 LLDTSIQSDHREIEGRVM------VT-------DFE------------NVPEE----DG--TRFHRQASKCDSHGTHLAG 232 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCCCCCChhhcCceE------ec-------ccc------------cccCC----CC--CcccCCCCCCCCcHHHhhh
Confidence 999999999999987510 10 000 00000 00 0001246789999999999
Q ss_pred HhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHc------CCcEEEeecCCCCCCCCC
Q 004809 194 TAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIID------GVDVLSMSLGLDGVDLYE 266 (729)
Q Consensus 194 iaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~------gvdVIn~SlG~~~~~~~~ 266 (729)
||+|+. .||||+|+|+++|+++..| ++.+++++||+|++++ |++|||||||+.. .
T Consensus 233 iIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~----s 294 (692)
T 2p4e_P 233 VVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY----S 294 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC----c
Confidence 999872 6999999999999998876 7888999999999986 8999999999743 3
Q ss_pred cHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcCCCCCceEEEcccccCccccEEEEeCCCcEEEeeeecCCCCCCceeeE
Q 004809 267 DPVAIATFAAIEKNIFVSTSAGNQGPFIG-TLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSLYPGNSSLIDFPI 345 (729)
Q Consensus 267 ~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~l 345 (729)
..+..++..|.++||+||+||||+|.... ..++..|++|+|||++.+...
T Consensus 295 ~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~----------------------------- 345 (692)
T 2p4e_P 295 RVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP----------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc-----------------------------
Confidence 45556667888999999999999997653 346788999999996532210
Q ss_pred EEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEechhhHHHHHHHHhh
Q 004809 346 VFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNSKTGDILKDYIKI 425 (729)
Q Consensus 346 v~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 425 (729)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCCCCCceeeccccc
Q 004809 426 ENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLSFSNFNLQSGTSM 505 (729)
Q Consensus 426 ~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSM 505 (729)
...-+.||++|| ||||+|||++|+++++.. ...|..++||||
T Consensus 346 -------------------a~~ss~fSn~G~--------~vDI~APG~~I~St~~~~-----------~~~y~~~SGTSm 387 (692)
T 2p4e_P 346 -------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDC-----------STCFVSQSGTSQ 387 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------cccccccCCCCC--------ceeEEecCCcEEeeccCC-----------CCceEeccchHH
Confidence 000123899997 579999999999998753 247899999999
Q ss_pred hhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 004809 506 ACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTD 541 (729)
Q Consensus 506 AaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~ 541 (729)
|||||||++|||+|++|+|+|++||++|++||.+..
T Consensus 388 AAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 388 AAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp ------------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999998653
No 10
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=3e-53 Score=461.24 Aligned_cols=301 Identities=21% Similarity=0.208 Sum_probs=199.4
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeee-----ceeeccccccccCC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLI-----GARFFNKGLLAKNP 172 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kii-----g~~~~~~~~~~~~~ 172 (729)
..+|.++..|++|+|||||||||++||+|++....+....|+..++........ .+..+. +..........
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 96 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYA-AFQSIRDQGLKGKEKEEALEAV--- 96 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHH-HHHHHHHHTCCSHHHHHHHHHH---
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCccccc-ccccccCccccccccccccccc---
Confidence 458999999999999999999999999999877667777787766542211000 000000 00000000000
Q ss_pred CCccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC------CChHHHHHHHHHHH
Q 004809 173 TITIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG------SFTSDIIAAIDQAI 246 (729)
Q Consensus 173 ~~~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g------~~~~~il~ai~~A~ 246 (729)
..+..++.|.+||||||||||||+... | +.||||+|+|+.+|++.... +...++++||++|+
T Consensus 97 --~~~~~~~~D~~gHGThVAGiiag~~~~-----g-----~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~ 164 (357)
T 4h6x_A 97 --IPDTKDRIVLNDHACHVTSTIVGQEHS-----P-----VFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLAL 164 (357)
T ss_dssp --CTTTHHHHHHHHHHHHHHHHHHCCTTS-----S-----CCCSCTTSEEEEEECTTC----------CHHHHHHHHHHH
T ss_pred --cCCCCCCcCCCCcHHHHHHHHhccCCC-----C-----ceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHH
Confidence 001123456789999999999997421 2 37999999999999975421 44567889999999
Q ss_pred HcCCcEEEeecCCCC-CCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeCCC
Q 004809 247 IDGVDVLSMSLGLDG-VDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLGNG 325 (729)
Q Consensus 247 ~~gvdVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~~g 325 (729)
+.|++|||||||... .....+.+..++..+.++|++||+||||+|......++..|++|+|||++.
T Consensus 165 ~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 231 (357)
T 4h6x_A 165 ELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV------------- 231 (357)
T ss_dssp HTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-------------
T ss_pred HcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-------------
Confidence 999999999999754 234567788888899999999999999999887788888999999998542
Q ss_pred cEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeecccc
Q 004809 326 NTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSS 405 (729)
Q Consensus 326 ~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~ 405 (729)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCc
Q 004809 406 FPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAV 485 (729)
Q Consensus 406 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~ 485 (729)
.+.++.||+||+.. .||||+|||++|+++++.+
T Consensus 232 ---------------------------------------~~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~~~--- 264 (357)
T 4h6x_A 232 ---------------------------------------DGTPCHFSNWGGNN-----TKEGILAPGEEILGAQPCT--- 264 (357)
T ss_dssp ---------------------------------------TSSBCTTCC---CT-----TTTEEEEECSSEEECCTTC---
T ss_pred ---------------------------------------CCcccccccCCCCC-----CccceeecCCCeEeccCCC---
Confidence 22578999999865 6899999999999998754
Q ss_pred cccCCCCCCCCceeeccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCC
Q 004809 486 SQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRG----AHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIA 561 (729)
Q Consensus 486 ~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~ 561 (729)
..|..++|||||||||||++|||++ ++|.|+++|||++|++||++++.. ....+.+
T Consensus 265 ---------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~-----------~~~~~~~ 324 (357)
T 4h6x_A 265 ---------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE-----------VVEEPER 324 (357)
T ss_dssp ---------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-------------------------
T ss_pred ---------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC-----------CCCCccc
Confidence 5678899999999999999999995 467899999999999999987532 2234568
Q ss_pred CCccccCccCcCC
Q 004809 562 MGAGHINPDKALD 574 (729)
Q Consensus 562 ~G~G~vn~~~Al~ 574 (729)
||+|+||+.+|++
T Consensus 325 ~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 325 CLRGFVNIPGAMK 337 (357)
T ss_dssp CTTCBCCHHHHHH
T ss_pred ceeEEecHHHHHH
Confidence 9999999999986
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.7e-50 Score=424.98 Aligned_cols=264 Identities=33% Similarity=0.371 Sum_probs=212.9
Q ss_pred cCCCCC--CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccc
Q 004809 92 LGLNPK--SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLA 169 (729)
Q Consensus 92 ~gl~~~--~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~ 169 (729)
|++..+ ..+|+.+..|+||+|+|||||||++||+|.++ ++..++|.+..
T Consensus 13 w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------------~~~~~~~~~~~-- 63 (280)
T 1dbi_A 13 YGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------------VIKGYDFVDND-- 63 (280)
T ss_dssp CTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------------EEEEEETTTTB--
T ss_pred CChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------------cccceeccCCC--
Confidence 555443 45899988888999999999999999999753 33444444321
Q ss_pred cCCCCccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHc
Q 004809 170 KNPTITIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIID 248 (729)
Q Consensus 170 ~~~~~~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~ 248 (729)
..+.|..+|||||||||+|...+. .| +.||||+|+|+.+|+++..+ ++.+++++||++|++.
T Consensus 64 ---------~~~~d~~gHGT~vAgiia~~~~~~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~ 126 (280)
T 1dbi_A 64 ---------YDPMDLNNHGTHVAGIAAAETNNA---TG-----IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADS 126 (280)
T ss_dssp ---------SCCCCSSSHHHHHHHHHHCCCSSS---SS-----CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHT
T ss_pred ---------CCCCCCCCcHHHHHHHHhCcCCCC---Cc-----ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHC
Confidence 235788999999999999975332 22 37999999999999998776 7888999999999999
Q ss_pred CCcEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeCCCcEE
Q 004809 249 GVDVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTV 328 (729)
Q Consensus 249 gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~ 328 (729)
|++|||||||... ....+..++..+.++|++||+||||+|......++..+++|+|||++.
T Consensus 127 g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------------- 187 (280)
T 1dbi_A 127 GAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ---------------- 187 (280)
T ss_dssp TCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT----------------
T ss_pred CCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC----------------
Confidence 9999999999753 346677888889999999999999999877777888999999998542
Q ss_pred EeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccE
Q 004809 329 TGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPA 408 (729)
Q Consensus 329 ~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~ 408 (729)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCcccc
Q 004809 409 VFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQT 488 (729)
Q Consensus 409 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~ 488 (729)
.+.++.||++||. |||+|||++|+++++.
T Consensus 188 ------------------------------------~~~~~~~S~~G~~--------~dv~ApG~~i~s~~~~------- 216 (280)
T 1dbi_A 188 ------------------------------------YDRLASFSNYGTW--------VDVVAPGVDIVSTITG------- 216 (280)
T ss_dssp ------------------------------------TSCBCTTBCCSTT--------CCEEEECSSEEEEETT-------
T ss_pred ------------------------------------CCCcCCCCCCCCC--------ceEEEecCCeEeecCC-------
Confidence 1256889999974 5999999999999874
Q ss_pred CCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccC
Q 004809 489 NSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHIN 568 (729)
Q Consensus 489 ~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn 568 (729)
+.|..++|||||||||||++|||++ |.+++.+||++|++||+++.. ....||+|+||
T Consensus 217 ------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~---------------~~~~~G~G~vn 273 (280)
T 1dbi_A 217 ------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG---------------TGTYFKYGRIN 273 (280)
T ss_dssp ------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT---------------BTTTBSSEECC
T ss_pred ------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC---------------CCCcccCCEEC
Confidence 4799999999999999999999987 899999999999999998742 12479999999
Q ss_pred ccCcCC
Q 004809 569 PDKALD 574 (729)
Q Consensus 569 ~~~Al~ 574 (729)
+.+|++
T Consensus 274 ~~~A~~ 279 (280)
T 1dbi_A 274 SYNAVT 279 (280)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999976
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.3e-50 Score=424.71 Aligned_cols=256 Identities=31% Similarity=0.424 Sum_probs=214.1
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
+.+|..+++|+||+|+|||||||++||+|+. ...+.|..+.
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~~---------- 54 (274)
T 1r0r_E 14 DKVQAQGFKGANVKVAVLDTGIQASHPDLNV-----------------------------VGGASFVAGE---------- 54 (274)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECSTTC----------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHhHcC-----------------------------CCCccccCCC----------
Confidence 4589999999999999999999999999941 1223333221
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHcCCcEEEee
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIIDGVDVLSMS 256 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~gvdVIn~S 256 (729)
..+.|..||||||||||+|.. +..| +.||||+|+|+.+|++...+ +..+++++||+||++.+++|||||
T Consensus 55 -~~~~d~~gHGT~vAgiia~~~----~~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S 124 (274)
T 1r0r_E 55 -AYNTDGNGHGTHVAGTVAALD----NTTG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMS 124 (274)
T ss_dssp -CTTCCSSSHHHHHHHHHHCCS----SSSB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEEC
T ss_pred -CCCCCCCCCHHHHHHHHHccC----CCCc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeC
Confidence 124678899999999999972 1122 37999999999999998776 778899999999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC----CCcCCCCCceEEEcccccCccccEEEEeCCCcEEEeee
Q 004809 257 LGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFI----GTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLS 332 (729)
Q Consensus 257 lG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~ 332 (729)
||... ....+..++.++.++|++||+||||+|... ...+...+++|+||+++.
T Consensus 125 ~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~-------------------- 181 (274)
T 1r0r_E 125 LGGAS---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS-------------------- 181 (274)
T ss_dssp EEBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT--------------------
T ss_pred CCCCC---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC--------------------
Confidence 99754 246677888889999999999999999752 345677899999998532
Q ss_pred ecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEec
Q 004809 333 LYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMN 412 (729)
Q Consensus 333 ~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~ 412 (729)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCC
Q 004809 413 SKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKL 492 (729)
Q Consensus 413 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~ 492 (729)
.+.++.||++|| ||||+|||++|+++++.
T Consensus 182 --------------------------------~~~~~~~S~~G~--------~~di~APG~~i~s~~~~----------- 210 (274)
T 1r0r_E 182 --------------------------------NSNRASFSSVGA--------ELEVMAPGAGVYSTYPT----------- 210 (274)
T ss_dssp --------------------------------TSCBCTTCCCST--------TEEEEEECSSEEEEETT-----------
T ss_pred --------------------------------CCCcCccCCCCC--------CceEEeCCCCeEeecCC-----------
Confidence 125688999998 46999999999999874
Q ss_pred CCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCc
Q 004809 493 SFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKA 572 (729)
Q Consensus 493 ~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~A 572 (729)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++. .+..||+|+||+.+|
T Consensus 211 --~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----------------~~~~~G~G~~~~~~A 272 (274)
T 1r0r_E 211 --NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG----------------SSFYYGKGLINVEAA 272 (274)
T ss_dssp --TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS----------------CHHHHTTCBCCHHHH
T ss_pred --CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC----------------CCCCcccCccCHHHH
Confidence 47999999999999999999999999999999999999999999763 345899999999999
Q ss_pred CC
Q 004809 573 LD 574 (729)
Q Consensus 573 l~ 574 (729)
++
T Consensus 273 ~~ 274 (274)
T 1r0r_E 273 AQ 274 (274)
T ss_dssp TC
T ss_pred hC
Confidence 85
No 13
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=3e-50 Score=420.50 Aligned_cols=255 Identities=31% Similarity=0.434 Sum_probs=215.2
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
+.+|..+++|+||+|+|||||| .+||+|+. ...++|..+.
T Consensus 14 ~~a~~~g~~G~gv~VaViDtGi-~~h~~l~~-----------------------------~~~~~~~~~~---------- 53 (269)
T 1gci_A 14 PAAHNRGLTGSGVKVAVLDTGI-STHPDLNI-----------------------------RGGASFVPGE---------- 53 (269)
T ss_dssp HHHHHTTCSCTTCEEEEEESCC-CCCTTCCE-----------------------------EEEEECSTTC----------
T ss_pred HHHHhcCCCCCCCEEEEECCCC-CCCHhhcc-----------------------------cCCcccCCCC----------
Confidence 4589999999999999999999 89999841 1223333210
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHcCCcEEEee
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIIDGVDVLSMS 256 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~gvdVIn~S 256 (729)
..+.|..||||||||||+|.. +..| +.||||+|+|+.+|+++..+ +..+++++||+||++.|++|||||
T Consensus 54 -~~~~d~~gHGT~vAgiia~~~----~~~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S 123 (269)
T 1gci_A 54 -PSTQDGNGHGTHVAGTIAALN----NSIG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLS 123 (269)
T ss_dssp -CSCSCSSSHHHHHHHHHHCCC----SSSB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred -CCCCCCCCChHHHHHHHhcCc----CCCC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeC
Confidence 125678999999999999972 1122 37999999999999998776 778899999999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeCCCcEEEeeeecCC
Q 004809 257 LGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSLYPG 336 (729)
Q Consensus 257 lG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~ 336 (729)
||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 124 ~G~~~---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------ 176 (269)
T 1gci_A 124 LGSPS---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------------------ 176 (269)
T ss_dssp CCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT------------------------
T ss_pred CCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC------------------------
Confidence 99753 245677788889999999999999999887778888999999998542
Q ss_pred CCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEechhhH
Q 004809 337 NSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNSKTG 416 (729)
Q Consensus 337 ~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g 416 (729)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCCCCC
Q 004809 417 DILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLSFSN 496 (729)
Q Consensus 417 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~ 496 (729)
.+.++.||++||. |||+|||++|+++++. +.
T Consensus 177 ----------------------------~~~~~~~S~~G~~--------~di~APG~~i~s~~~~-------------~~ 207 (269)
T 1gci_A 177 ----------------------------NNNRASFSQYGAG--------LDIVAPGVNVQSTYPG-------------ST 207 (269)
T ss_dssp ----------------------------TSCBCTTCCCSTT--------EEEEEECSSEEEEETT-------------TE
T ss_pred ----------------------------CCCCCCCCCCCCC--------cceEecCCCeEeecCC-------------CC
Confidence 1256889999984 5999999999999874 47
Q ss_pred ceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCcCC
Q 004809 497 FNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKALD 574 (729)
Q Consensus 497 y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 574 (729)
|..++|||||||||||++|||+|++|+|++.+||++|++||+++. .++.||+|+||+.+|++
T Consensus 208 ~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g----------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 208 YASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG----------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS----------------CHHHHTTCBCCHHHHTC
T ss_pred EEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC----------------CCCCcccCccCHHHHcC
Confidence 899999999999999999999999999999999999999999763 24579999999999985
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=5.9e-50 Score=421.16 Aligned_cols=258 Identities=32% Similarity=0.437 Sum_probs=214.6
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|..+++|+||+|+|||||||++||+|+. ...+.|..+ +
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~----------~ 54 (281)
T 1to2_E 14 PALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPS----------E 54 (281)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTT----------C
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCC----------C
Confidence 4589999999999999999999999999952 112222211 0
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHcCCcEEEee
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIIDGVDVLSMS 256 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~gvdVIn~S 256 (729)
.....|..+|||||||||+|.. +..| +.||||+|+|+.+|++...+ +..++++++|+||+++|++|||||
T Consensus 55 ~~~~~d~~gHGT~vAgiia~~~----~~~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S 125 (281)
T 1to2_E 55 TNPFQDNNSHGTHVAGTVAALN----NSIG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMS 125 (281)
T ss_dssp CCTTCCSSSHHHHHHHHHHCCS----SSSS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCCCCcHHHHHHHHhccC----CCCc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEEC
Confidence 0123678899999999999972 1122 37999999999999998776 778899999999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC----CCcCCCCCceEEEcccccCccccEEEEeCCCcEEEeee
Q 004809 257 LGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFI----GTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLS 332 (729)
Q Consensus 257 lG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~ 332 (729)
||... ....+..++.++.++|++||+||||+|... ...+...|++|+|||++.
T Consensus 126 ~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~-------------------- 182 (281)
T 1to2_E 126 LGGPS---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS-------------------- 182 (281)
T ss_dssp EEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT--------------------
T ss_pred CcCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC--------------------
Confidence 99753 246777888889999999999999999752 345677899999998531
Q ss_pred ecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEec
Q 004809 333 LYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMN 412 (729)
Q Consensus 333 ~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~ 412 (729)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCC
Q 004809 413 SKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKL 492 (729)
Q Consensus 413 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~ 492 (729)
.+.++.||++||. |||+|||++|+++++.
T Consensus 183 --------------------------------~~~~~~fS~~G~~--------~di~APG~~i~s~~~~----------- 211 (281)
T 1to2_E 183 --------------------------------SNQRASFSSVGPE--------LDVMAPGVSIQSTLPG----------- 211 (281)
T ss_dssp --------------------------------TSCBCTTCCCSTT--------CCEEEECSSEEEEETT-----------
T ss_pred --------------------------------CCCcCCcCCCCCC--------ceEEecCCCeEeecCC-----------
Confidence 1256889999984 5999999999999874
Q ss_pred CCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCc
Q 004809 493 SFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKA 572 (729)
Q Consensus 493 ~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~A 572 (729)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||+++. +++.||+|+||+.+|
T Consensus 212 --~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----------------~~~~~G~G~v~~~~a 273 (281)
T 1to2_E 212 --NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG----------------DSFYYGKGLINVQAA 273 (281)
T ss_dssp --TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS----------------CHHHHTTCBCCHHHH
T ss_pred --CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC----------------CCCCcccceecHHHH
Confidence 47899999999999999999999999999999999999999999763 356899999999999
Q ss_pred CCC
Q 004809 573 LDP 575 (729)
Q Consensus 573 l~~ 575 (729)
+++
T Consensus 274 ~~~ 276 (281)
T 1to2_E 274 AQH 276 (281)
T ss_dssp TSS
T ss_pred hhh
Confidence 975
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.1e-50 Score=435.62 Aligned_cols=263 Identities=28% Similarity=0.359 Sum_probs=214.0
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|..+++|+||+|||||||||++||+|.++ +++.++|..++.. +
T Consensus 31 ~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~-------~ 76 (327)
T 2x8j_A 31 PAVWRASAKGAGQIIGVIDTGCQVDHPDLAER---------------------------IIGGVNLTTDYGG-------D 76 (327)
T ss_dssp HHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG---------------------------EEEEEECSSGGGG-------C
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc---------------------------ccCCccccCCCCC-------C
Confidence 55899999999999999999999999999753 4444555443211 1
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHH------cCC
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAII------DGV 250 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~------~gv 250 (729)
.....|..||||||||||+|+.. + .| +.||||+|+|+.+|+++..+ +..+++++||+||++ .++
T Consensus 77 ~~~~~d~~gHGT~VAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~ 147 (327)
T 2x8j_A 77 ETNFSDNNGHGTHVAGTVAAAET-G---SG-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQM 147 (327)
T ss_dssp TTCCCCSSSHHHHHHHHHHCCCC-S---SB-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCC
T ss_pred CCCCCCCCCchHHHHHHHhccCC-C---CC-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCc
Confidence 12356889999999999999731 1 12 38999999999999998776 778899999999999 899
Q ss_pred cEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC-----CCcCCCCCceEEEcccccCccccEEEEeCCC
Q 004809 251 DVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFI-----GTLHNGIPWVMTVAAGTMDRELGATLTLGNG 325 (729)
Q Consensus 251 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~t~~~~~p~vitVgAst~d~~~~~~~~l~~g 325 (729)
+|||||||... ....+..++..|.++|++||+||||+|... ...++..+++|+|||++.+
T Consensus 148 ~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~------------ 212 (327)
T 2x8j_A 148 RIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD------------ 212 (327)
T ss_dssp SEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT------------
T ss_pred eEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC------------
Confidence 99999999753 346677788889999999999999999652 4566778999999985421
Q ss_pred cEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeecccc
Q 004809 326 NTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSS 405 (729)
Q Consensus 326 ~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~ 405 (729)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCc
Q 004809 406 FPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAV 485 (729)
Q Consensus 406 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~ 485 (729)
+.++.||++|| ||||+|||++|+++++.
T Consensus 213 ----------------------------------------~~~~~fS~~G~--------~~di~APG~~i~s~~~~---- 240 (327)
T 2x8j_A 213 ----------------------------------------LRLSDFTNTNE--------EIDIVAPGVGIKSTYLD---- 240 (327)
T ss_dssp ----------------------------------------CCBSCC---CC--------CCSEEEECSSEEEECST----
T ss_pred ----------------------------------------CCCCCccCCCC--------CceEecCcCceEeecCC----
Confidence 25688999998 56999999999999874
Q ss_pred cccCCCCCCCCceeeccccchhHHHHHHHHHHHhh-----CCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCC
Q 004809 486 SQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGA-----HPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPI 560 (729)
Q Consensus 486 ~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~-----~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~ 560 (729)
+.|..++|||||||||||++|||+|+ +|.|++.+||++|++||+++.. ++.
T Consensus 241 ---------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~---------------~~~ 296 (327)
T 2x8j_A 241 ---------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF---------------TAQ 296 (327)
T ss_dssp ---------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS---------------CHH
T ss_pred ---------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC---------------CCC
Confidence 47999999999999999999999999 9999999999999999997631 356
Q ss_pred CCCccccCccCcCC
Q 004809 561 AMGAGHINPDKALD 574 (729)
Q Consensus 561 ~~G~G~vn~~~Al~ 574 (729)
.||+|+||+.+|++
T Consensus 297 ~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 297 AEGNGFLTLDLVER 310 (327)
T ss_dssp HHTTCEECTTHHHH
T ss_pred ceeeeEECHHHHHH
Confidence 89999999999987
No 16
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.5e-50 Score=426.53 Aligned_cols=264 Identities=23% Similarity=0.277 Sum_probs=209.5
Q ss_pred CCCC-CCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccCCCCCC
Q 004809 104 SKFG-KDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIAMNSPR 182 (729)
Q Consensus 104 ~~~G-~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~~~~ 182 (729)
.++| +||+|||||||||++||+|.++. +..+.+... .......
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~---------------------------~~~~~~~~~---------~~~~~d~ 46 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD---------------------------LTVLPTLAP---------TAARSDG 46 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE---------------------------EEECCCSSC---------CCCCTTC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe---------------------------eecCcCCCC---------CCCCCCC
Confidence 3578 79999999999999999998641 111111111 0001223
Q ss_pred CCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC--CChHHHHHHHHHHHHcCCcEEEeecCCC
Q 004809 183 DANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG--SFTSDIIAAIDQAIIDGVDVLSMSLGLD 260 (729)
Q Consensus 183 D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~il~ai~~A~~~gvdVIn~SlG~~ 260 (729)
|.+||||||||||+|+... | +.||||+|+|+.+|++.+.+ .+..++++||+||++.+++|||||||..
T Consensus 47 ~~~gHGT~VAGiiag~~~~-----~-----~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 116 (282)
T 3zxy_A 47 FMSAHGTHVASIIFGQPET-----S-----VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGEL 116 (282)
T ss_dssp HHHHHHHHHHHHHHCCTTS-----S-----SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEE
T ss_pred CCCCcccceeehhhccCCc-----e-----eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccc
Confidence 4568999999999997422 2 37999999999999986543 6778899999999999999999999975
Q ss_pred CC-CCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeCCCcEEEeeeecCCCCC
Q 004809 261 GV-DLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSLYPGNSS 339 (729)
Q Consensus 261 ~~-~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~ 339 (729)
.. ......+..++..+.++|+++|+||||+|......+...+++|+|||++.
T Consensus 117 ~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~--------------------------- 169 (282)
T 3zxy_A 117 TDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD--------------------------- 169 (282)
T ss_dssp ESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT---------------------------
T ss_pred cccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC---------------------------
Confidence 32 23455677777889999999999999999888788888999999998542
Q ss_pred CceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEechhhHHHH
Q 004809 340 LIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNSKTGDIL 419 (729)
Q Consensus 340 ~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l 419 (729)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCCCCCcee
Q 004809 420 KDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLSFSNFNL 499 (729)
Q Consensus 420 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~ 499 (729)
.+.++.||+||+.. .||||+|||++|+++++. +.|..
T Consensus 170 -------------------------~~~~~~~S~~~~~~-----~~~di~ApG~~i~s~~~~-------------~~~~~ 206 (282)
T 3zxy_A 170 -------------------------HGHPLDFSNWGSTY-----EQQGILAPGEDILGAKPG-------------GGTER 206 (282)
T ss_dssp -------------------------TSCBCSSSCCCHHH-----HHHEEEEECSSEEEECTT-------------SCEEE
T ss_pred -------------------------CCccccccCCCCCc-----cccceeccCcceeeecCC-------------Cceee
Confidence 22567899999865 789999999999999875 47999
Q ss_pred eccccchhHHHHHHHHHHHhhC----CCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCcCC
Q 004809 500 QSGTSMACPQAAGIAALLRGAH----PEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKALD 574 (729)
Q Consensus 500 ~sGTSMAaP~VAG~aALl~q~~----P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 574 (729)
++|||||||||||++|||+|++ |.++|++||++|++||++++. ..+.....||+|+||+.+|++
T Consensus 207 ~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~-----------~~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 207 LSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD-----------DAPEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC------------------CGGGTTCBCCHHHHHH
T ss_pred cCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC-----------CCCCccCceeeeEeCHHHHHH
Confidence 9999999999999999999874 789999999999999997653 223456689999999999986
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=5.6e-49 Score=420.24 Aligned_cols=283 Identities=29% Similarity=0.365 Sum_probs=222.6
Q ss_pred CCCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCcc
Q 004809 97 KSGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITI 176 (729)
Q Consensus 97 ~~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~ 176 (729)
...+|..+++|+||+|+|||||||++||+|.++ +...++|..... .
T Consensus 15 ~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~~-------~ 60 (310)
T 2ixt_A 15 NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGATT-------P 60 (310)
T ss_dssp TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSSS-------C
T ss_pred chhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCCC-------C
Confidence 467999999999999999999999999999864 233344433210 0
Q ss_pred CCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHcCC-----
Q 004809 177 AMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIIDGV----- 250 (729)
Q Consensus 177 ~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~gv----- 250 (729)
......|..||||||||||+|....+ ..| +.||||+|+|+.+|++...+ ++.+++++||+||+++++
T Consensus 61 ~~~~~~d~~gHGT~vAgiia~~~~~n--~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~ 133 (310)
T 2ixt_A 61 INNSCTDRNGHGTHVAGTALADGGSD--QAG-----IYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTK 133 (310)
T ss_dssp EETCCCCSSSHHHHHHHHHHCBCCTT--SCS-----CBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCCCCCHHHHHHHHhccCCCC--CCc-----eEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCC
Confidence 11235678999999999999975221 112 37999999999999998776 688899999999999887
Q ss_pred cEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCC--CCCcCCCCCceEEEcccccCccccEEEEeCCCcEE
Q 004809 251 DVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPF--IGTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTV 328 (729)
Q Consensus 251 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~--~~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~ 328 (729)
+|||||||... ....+..++.++.++|++||+||||+|.. ....++..+++|+|||++....
T Consensus 134 ~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~------------- 197 (310)
T 2ixt_A 134 TIISMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ------------- 197 (310)
T ss_dssp EEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE-------------
T ss_pred eEEEEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc-------------
Confidence 99999999753 24567777888899999999999999975 3456678899999998541100
Q ss_pred EeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccE
Q 004809 329 TGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPA 408 (729)
Q Consensus 329 ~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~ 408 (729)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCC-C---CCccCcEEecCCCEEeecCCCCC
Q 004809 409 VFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISC-P---FVLKPDVMAPGDSILAAWPSNLA 484 (729)
Q Consensus 409 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~-~---~ilKPDI~APG~~I~sa~~~~~~ 484 (729)
.....++.||++||.... . ...||||+|||++|+++++.
T Consensus 198 ----------------------------------~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~--- 240 (310)
T 2ixt_A 198 ----------------------------------NGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYN--- 240 (310)
T ss_dssp ----------------------------------TTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTT---
T ss_pred ----------------------------------CCCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecCC---
Confidence 000156889999995321 1 12499999999999999874
Q ss_pred ccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCc
Q 004809 485 VSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGA 564 (729)
Q Consensus 485 ~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~ 564 (729)
+.|..++|||||||||||++|||+|++|+|++.+||++|++||++.+..+. ....+..++.|||
T Consensus 241 ----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~------~~a~~g~d~~~G~ 304 (310)
T 2ixt_A 241 ----------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG------YGAAIGDDYASGF 304 (310)
T ss_dssp ----------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS------TTCCSSSBTTTBT
T ss_pred ----------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC------cccccCCcccccc
Confidence 479999999999999999999999999999999999999999998764321 1134567789999
Q ss_pred cccCc
Q 004809 565 GHINP 569 (729)
Q Consensus 565 G~vn~ 569 (729)
|++|.
T Consensus 305 G~~~v 309 (310)
T 2ixt_A 305 GFARV 309 (310)
T ss_dssp CBCCC
T ss_pred ceeec
Confidence 99986
No 18
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=3.1e-49 Score=415.36 Aligned_cols=257 Identities=33% Similarity=0.421 Sum_probs=215.9
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|+.. +|+||+|+|||||||++||+|.++ ++..++|.++.
T Consensus 21 ~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~~---------- 62 (279)
T 1thm_A 21 PQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK---------------------------VVGGWDFVDND---------- 62 (279)
T ss_dssp HHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEETTTTB----------
T ss_pred HHHHhcC-CCCCCEEEEEccCCCCCCcchhcC---------------------------ccccccccCCC----------
Confidence 4588876 699999999999999999999753 34444444321
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHcCCcEEEee
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIIDGVDVLSMS 256 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~gvdVIn~S 256 (729)
..+.|..+|||||||||+|...++ .| +.||||+|+|+.+|+++..+ ++.+++++||++|++.|++|||||
T Consensus 63 -~~~~d~~gHGT~vAgiia~~~~n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S 133 (279)
T 1thm_A 63 -STPQNGNGHGTHCAGIAAAVTNNS---TG-----IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLS 133 (279)
T ss_dssp -SCCCCSSSHHHHHHHHHHCCCSSS---SS-----CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred -CCCCCCCCcHHHHHHHHhCccCCC---Cc-----cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEe
Confidence 235788999999999999975432 22 37999999999999998776 778899999999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeCCCcEEEeeeecCC
Q 004809 257 LGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSLYPG 336 (729)
Q Consensus 257 lG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~~~ 336 (729)
||... ....+..++.++.++|++||+||||+|......+...+++|+|||++.
T Consensus 134 ~G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------ 186 (279)
T 1thm_A 134 LGGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------------------ 186 (279)
T ss_dssp CCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT------------------------
T ss_pred cCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC------------------------
Confidence 99753 345677888889999999999999999877778888999999998542
Q ss_pred CCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEechhhH
Q 004809 337 NSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNSKTG 416 (729)
Q Consensus 337 ~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g 416 (729)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCCCCC
Q 004809 417 DILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLSFSN 496 (729)
Q Consensus 417 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~ 496 (729)
.+.++.||++||. |||+|||++|+++++. ..
T Consensus 187 ----------------------------~~~~~~fS~~G~~--------~dv~APG~~i~s~~~~-------------~~ 217 (279)
T 1thm_A 187 ----------------------------NDNKSSFSTYGSW--------VDVAAPGSSIYSTYPT-------------ST 217 (279)
T ss_dssp ----------------------------TSCBCTTCCCCTT--------CCEEEECSSEEEEETT-------------TE
T ss_pred ----------------------------CCCcCCcCCCCCc--------eEEEEcCCCeEEEeCC-------------CC
Confidence 1256889999974 5999999999999874 47
Q ss_pred ceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCccCcCC
Q 004809 497 FNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPDKALD 574 (729)
Q Consensus 497 y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 574 (729)
|..++|||||||||||++||| ++|.+++.+||++|++||+++... ...||+|+||+.+|++
T Consensus 218 ~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~---------------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 218 YASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT---------------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp EEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB---------------TTTBSSEECCHHHHHH
T ss_pred EEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC---------------CccccCCeeCHHHHhc
Confidence 999999999999999999999 579999999999999999987532 1478999999999975
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=5.1e-50 Score=427.63 Aligned_cols=270 Identities=23% Similarity=0.297 Sum_probs=217.0
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
+++|+.+..++||+|||||||||++||+|.++ .+.+..++..+.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~~---------- 54 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSGE---------- 54 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCCC----------
Confidence 45999988779999999999999999999864 112222222211
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC--CChHHHHHHHHHHHHcCCcEEEe
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG--SFTSDIIAAIDQAIIDGVDVLSM 255 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~il~ai~~A~~~gvdVIn~ 255 (729)
.....|..||||||||||||+... | +.||||+|+|+.+|++.+.+ +...++++||+||+++|++|||+
T Consensus 55 ~~~~~d~~gHGThVAGiiag~~~~-----~-----~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~ 124 (306)
T 4h6w_A 55 ANANGSMSTHGTHVASIIFGQHDS-----P-----VTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINV 124 (306)
T ss_dssp ----CCCCHHHHHHHHHHHCCTTS-----S-----SCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCCCchHHHHHHHHccccC-----C-----cceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeec
Confidence 112346789999999999997421 1 37999999999999986553 67788999999999999999999
Q ss_pred ecCCCC-CCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccCccccEEEEeCCCcEEEeeeec
Q 004809 256 SLGLDG-VDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSLY 334 (729)
Q Consensus 256 SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~~ 334 (729)
|||... .......+..++..+.++|++||+||||+|......++..+++|+|||++.
T Consensus 125 s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~---------------------- 182 (306)
T 4h6w_A 125 SAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD---------------------- 182 (306)
T ss_dssp CCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT----------------------
T ss_pred cccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC----------------------
Confidence 999643 233455677788889999999999999999887778888899999998542
Q ss_pred CCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEechh
Q 004809 335 PGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNSK 414 (729)
Q Consensus 335 ~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~ 414 (729)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCCC
Q 004809 415 TGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLSF 494 (729)
Q Consensus 415 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~~ 494 (729)
...+++||++|+.. .||||+|||++|+++++.
T Consensus 183 ------------------------------~~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~------------- 214 (306)
T 4h6w_A 183 ------------------------------QGKPVDFSNWGDAY-----QKQGILAPGKDILGAKPN------------- 214 (306)
T ss_dssp ------------------------------TSCBCSSSCBCHHH-----HHHEEEEECSSEEEECTT-------------
T ss_pred ------------------------------CCCccccccccCCc-----CcceeecCCcCcccccCC-------------
Confidence 12567899999865 789999999999999874
Q ss_pred CCceeeccccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCccccCcc
Q 004809 495 SNFNLQSGTSMACPQAAGIAALLRGA----HPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGAGHINPD 570 (729)
Q Consensus 495 ~~y~~~sGTSMAaP~VAG~aALl~q~----~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~ 570 (729)
+.|..++|||||||||||++|||+++ +|.|+|++||++|++||+++...+ ......||+|+||+.
T Consensus 215 ~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-----------~~~~~~~G~G~ln~~ 283 (306)
T 4h6w_A 215 GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD-----------TDDQSRCLMGKLNIL 283 (306)
T ss_dssp SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT-----------CSCGGGGTTCBCCHH
T ss_pred CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC-----------CCCCCCcceeecCHH
Confidence 47999999999999999999999864 699999999999999999875432 223457999999999
Q ss_pred CcCC
Q 004809 571 KALD 574 (729)
Q Consensus 571 ~Al~ 574 (729)
+|++
T Consensus 284 ~Av~ 287 (306)
T 4h6w_A 284 DAIE 287 (306)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9987
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.2e-49 Score=424.88 Aligned_cols=264 Identities=28% Similarity=0.409 Sum_probs=216.6
Q ss_pred CCCCCcCCCCCC--CcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCC
Q 004809 97 KSGAWPVSKFGK--DIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTI 174 (729)
Q Consensus 97 ~~~~w~~~~~G~--gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~ 174 (729)
.+.+|..+ +|+ ||+|+|||||||++||+|.++ +...++|..+...
T Consensus 17 ~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~----- 63 (320)
T 2z30_A 17 APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS----- 63 (320)
T ss_dssp CGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB-----
T ss_pred hHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCccccCCccC-----
Confidence 45699988 899 999999999999999999753 2233333322100
Q ss_pred ccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHc-----
Q 004809 175 TIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIID----- 248 (729)
Q Consensus 175 ~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~----- 248 (729)
.......|..||||||||||+|.. +..| +.||||+|+|+.+|+++..| +..+++++||+||++.
T Consensus 64 -~~~~~~~d~~gHGT~vAgiia~~~----n~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~ 133 (320)
T 2z30_A 64 -TKLRDCADQNGHGTHVIGTIAALN----NDIG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVA 133 (320)
T ss_dssp -CCHHHHBCSSSHHHHHHHHHHCCS----SSBS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCS
T ss_pred -CCCCCCCCCCCCHHHHHHHHHccc----CCCc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCccccc
Confidence 000123578899999999999962 1122 37999999999999998776 7788999999999987
Q ss_pred ---------------CCcEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCCcCCCCCceEEEcccccC
Q 004809 249 ---------------GVDVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGTLHNGIPWVMTVAAGTMD 313 (729)
Q Consensus 249 ---------------gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t~~~~~p~vitVgAst~d 313 (729)
+++|||||||... ....+..++.++.++|++||+||||+|.....+++..|++|+|||++.
T Consensus 134 ~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~- 209 (320)
T 2z30_A 134 DKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS- 209 (320)
T ss_dssp CTTSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-
T ss_pred ccccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCC-
Confidence 9999999999754 245677777889999999999999999887788888999999998542
Q ss_pred ccccEEEEeCCCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEe
Q 004809 314 RELGATLTLGNGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFIS 393 (729)
Q Consensus 314 ~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~ 393 (729)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeccccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCC
Q 004809 394 DFDGLEFFLQSSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGD 473 (729)
Q Consensus 394 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~ 473 (729)
.+.++.||++|| +|+|||+
T Consensus 210 ---------------------------------------------------~~~~~~~S~~g~----------~v~APG~ 228 (320)
T 2z30_A 210 ---------------------------------------------------NDNIASFSNRQP----------EVSAPGV 228 (320)
T ss_dssp ---------------------------------------------------TSCBCTTSCSSC----------SEEEECS
T ss_pred ---------------------------------------------------CCCcCcccCCCC----------CEEeCCC
Confidence 125688999986 7899999
Q ss_pred CEEeecCCCCCccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhC-------------CCCCHHHHHHHHHhccccC
Q 004809 474 SILAAWPSNLAVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAH-------------PEWSPAAIRSAIMTTSDST 540 (729)
Q Consensus 474 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~-------------P~~sp~~Ik~~L~~TA~~~ 540 (729)
+|+++++. +.|..++|||||||||||++|||+|++ |+|++.+||++|++||+++
T Consensus 229 ~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~ 295 (320)
T 2z30_A 229 DILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDL 295 (320)
T ss_dssp SEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCC
T ss_pred CeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccC
Confidence 99999874 478999999999999999999999999 9999999999999999987
Q ss_pred CCCCCCcccCCCCCCCCCCCCCCccccCccCcCC
Q 004809 541 DNTNSDIKDIGDDNKPATPIAMGAGHINPDKALD 574 (729)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 574 (729)
.. +..+..||+|+||+.+|++
T Consensus 296 ~~-------------~g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 296 GP-------------TGWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp SS-------------SSSBTTTBTCBCCHHHHHH
T ss_pred CC-------------CCCCCCcCCceeCHHHHHH
Confidence 42 2245689999999999986
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=2.1e-49 Score=430.17 Aligned_cols=271 Identities=19% Similarity=0.200 Sum_probs=217.9
Q ss_pred CCCCCcCCCCCC--CcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCC
Q 004809 97 KSGAWPVSKFGK--DIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTI 174 (729)
Q Consensus 97 ~~~~w~~~~~G~--gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~ 174 (729)
...+|+. ++|+ ||+||||||||| +||+|.++ ++..++|..+.+
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~~~------ 76 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQDGS------ 76 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTTCC------
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCCCC------
Confidence 4568988 8999 999999999999 99999754 333344433210
Q ss_pred ccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCCChHHHHHHHHHHHHc------
Q 004809 175 TIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGSFTSDIIAAIDQAIID------ 248 (729)
Q Consensus 175 ~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~A~~~------ 248 (729)
+.+...+.|..||||||||||+|+ .| +.||||+|+|+.+|+++..+.. ++++||+||+++
T Consensus 77 ~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~ 142 (347)
T 2iy9_A 77 PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPG 142 (347)
T ss_dssp SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTT
T ss_pred CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccC
Confidence 111124567889999999999997 12 2799999999999999765543 999999999999
Q ss_pred CCcEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCC-------CCCcCCCCC----------ceEEEcccc
Q 004809 249 GVDVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPF-------IGTLHNGIP----------WVMTVAAGT 311 (729)
Q Consensus 249 gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~t~~~~~p----------~vitVgAst 311 (729)
|++|||||||..........+..++..+.++|++||+||||+|.. ....++..+ ++|+|||++
T Consensus 143 ~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~ 222 (347)
T 2iy9_A 143 EEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALA 222 (347)
T ss_dssp EEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEEC
T ss_pred CceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcc
Confidence 999999999976544466778888889999999999999999975 345667778 999999965
Q ss_pred c--CccccEEEEeCCCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEE
Q 004809 312 M--DRELGATLTLGNGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGG 389 (729)
Q Consensus 312 ~--d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~ 389 (729)
. +...
T Consensus 223 ~~~~g~~------------------------------------------------------------------------- 229 (347)
T 2iy9_A 223 QYRKGET------------------------------------------------------------------------- 229 (347)
T ss_dssp CCCTTSC-------------------------------------------------------------------------
T ss_pred cCCCCce-------------------------------------------------------------------------
Confidence 4 1110
Q ss_pred EEEecCCCceeeccccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEE
Q 004809 390 VFISDFDGLEFFLQSSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVM 469 (729)
Q Consensus 390 i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~ 469 (729)
......++.||++||+ ||||+
T Consensus 230 ----------------------------------------------------~~~~~~~~~fS~~G~~-------~~di~ 250 (347)
T 2iy9_A 230 ----------------------------------------------------PVLHGGGITGSRFGNN-------WVDIA 250 (347)
T ss_dssp ----------------------------------------------------CCBCCCSSSCBCBCTT-------TCSEE
T ss_pred ----------------------------------------------------ecccCCCCCCCCCCCC-------CCEEE
Confidence 0001245799999995 78999
Q ss_pred ecCCCEEeecCCCCCccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCccc
Q 004809 470 APGDSILAAWPSNLAVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKD 549 (729)
Q Consensus 470 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~ 549 (729)
|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||++....
T Consensus 251 APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~------ 311 (347)
T 2iy9_A 251 APGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSL------ 311 (347)
T ss_dssp EECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGG------
T ss_pred eCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCC------
Confidence 999999999874 4799999999999999999999999999999999999999999987532
Q ss_pred CCCCCCCCCCCCCCccccCccCcCCC
Q 004809 550 IGDDNKPATPIAMGAGHINPDKALDP 575 (729)
Q Consensus 550 ~~~~~~~~~~~~~G~G~vn~~~Al~~ 575 (729)
....||+|+||+.+|++.
T Consensus 312 --------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 312 --------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp --------TTTSGGGEECCHHHHHHH
T ss_pred --------CCccccCCEecHHHHHHH
Confidence 135899999999999873
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=1.9e-48 Score=421.53 Aligned_cols=298 Identities=25% Similarity=0.330 Sum_probs=220.2
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCee---eceeeccccccccCCCC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKL---IGARFFNKGLLAKNPTI 174 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~ki---ig~~~~~~~~~~~~~~~ 174 (729)
..+|+.+++|+||+||||||||+ +||+|.++-. ..|+-.......+. .+.+. .....+.+.+.. ...
T Consensus 22 ~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~----~~~~~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~--~~~ 91 (340)
T 3lpc_A 22 DKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVL----PGYDFISNSQISLD---GDGRDADPFDEGDWFDNWAC--GGR 91 (340)
T ss_dssp HHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBC----CCEECCCCHHHHCS---SSSSBSCCBCCCCCBCTTTT--SCT
T ss_pred HHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccc----cCccccCCcccccc---CCCccCCccccccccccccc--cCC
Confidence 45999999999999999999998 9999986411 11110000000000 00000 000000000000 011
Q ss_pred ccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCCChHHHHHHHHHHHH-------
Q 004809 175 TIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGSFTSDIIAAIDQAII------- 247 (729)
Q Consensus 175 ~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~A~~------- 247 (729)
+.+.....|..||||||||||+|...+.. | +.||||+|+|+.+|++...+++.++++++|+||++
T Consensus 92 ~~~~~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~ 163 (340)
T 3lpc_A 92 PDPRKERSDSSWHGSHVAGTIAAVTNNRI---G-----VAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIP 163 (340)
T ss_dssp TCGGGSCBCCCCHHHHHHHHHHCCCSSSS---S-----CCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSC
T ss_pred CCcccCCCCCCCCHHHHHHHHHccCCCCC---c-----ceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhcccccccc
Confidence 22233467889999999999999754332 2 37999999999999998888889999999999998
Q ss_pred ---cCCcEEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcCCCCCceEEEcccccCccccEEEEeC
Q 004809 248 ---DGVDVLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIG-TLHNGIPWVMTVAAGTMDRELGATLTLG 323 (729)
Q Consensus 248 ---~gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-t~~~~~p~vitVgAst~d~~~~~~~~l~ 323 (729)
.+++|||||||... .....+..++..+.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 164 ~~~~~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~----------- 230 (340)
T 3lpc_A 164 ENRNPAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS----------- 230 (340)
T ss_dssp CCSSCCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT-----------
T ss_pred cccCCCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC-----------
Confidence 89999999999743 23455677777888999999999999997643 45678899999998542
Q ss_pred CCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeecc
Q 004809 324 NGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQ 403 (729)
Q Consensus 324 ~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~ 403 (729)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCC
Q 004809 404 SSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNL 483 (729)
Q Consensus 404 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~ 483 (729)
.+.++.||++|| ||||+|||++|+++++...
T Consensus 231 -----------------------------------------~~~~~~~S~~g~--------~~di~ApG~~i~s~~~~~~ 261 (340)
T 3lpc_A 231 -----------------------------------------RGIRASFSNYGV--------DVDLAAPGQDILSTVDSGT 261 (340)
T ss_dssp -----------------------------------------TSSBCTTCCBST--------TCCEEEECSSEEEEEESCS
T ss_pred -----------------------------------------CCCcCCCCCCCC--------CceEEecCCCeecccCCCC
Confidence 125689999997 6799999999999987542
Q ss_pred CccccCCCCCCCCceeeccccchhHHHHHHHHHHHhh-C---CCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCC
Q 004809 484 AVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGA-H---PEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATP 559 (729)
Q Consensus 484 ~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~-~---P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~ 559 (729)
.. .....|..++|||||||||||++|||+|+ + |.|++++||++|++||++... ..+
T Consensus 262 ~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~--------------~~~ 321 (340)
T 3lpc_A 262 RR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG--------------RLD 321 (340)
T ss_dssp SS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS--------------CCS
T ss_pred cC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC--------------CCC
Confidence 11 11246999999999999999999999998 5 999999999999999997642 135
Q ss_pred CCCCccccCccCcCCC
Q 004809 560 IAMGAGHINPDKALDP 575 (729)
Q Consensus 560 ~~~G~G~vn~~~Al~~ 575 (729)
..||+|+||+.+|++.
T Consensus 322 ~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 322 RALGSGIVDAEAAVNS 337 (340)
T ss_dssp SCCCSSBCCHHHHHHH
T ss_pred CCcccceecHHHHHHH
Confidence 5899999999999874
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=4.7e-48 Score=431.76 Aligned_cols=291 Identities=26% Similarity=0.305 Sum_probs=223.7
Q ss_pred CCCCc-CCCCCCCcEEEEEcccCCC------CCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeecccccccc
Q 004809 98 SGAWP-VSKFGKDIIIGVVDTGVWP------ESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAK 170 (729)
Q Consensus 98 ~~~w~-~~~~G~gvvVgVIDtGid~------~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~ 170 (729)
+.+|. .+++|+||+|||||||||+ .||+|.++ ++..++|.+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~---------------------------i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK---------------------------ITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC---------------------------EEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC---------------------------EeeeccccCC----
Confidence 45887 6999999999999999999 79998753 3333444321
Q ss_pred CCCCccCCCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCC---ChHHHHHHHHHHHH
Q 004809 171 NPTITIAMNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGS---FTSDIIAAIDQAII 247 (729)
Q Consensus 171 ~~~~~~~~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~il~ai~~A~~ 247 (729)
..+.|..||||||||||+|+.. + +.||||+|+|+.+|+++..+. ..+++.++|++|++
T Consensus 60 --------~~~~d~~gHGT~VAgiiag~g~------~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~ 120 (434)
T 1wmd_A 60 --------NNANDTNGHGTHVAGSVLGNGS------T-----NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYS 120 (434)
T ss_dssp --------TCCCCSSSHHHHHHHHHHCCSS------S-----SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHH
T ss_pred --------CCCCCCCCcHHHHHHHHHcCCC------C-----ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHh
Confidence 2467889999999999999631 1 379999999999999987663 45679999999999
Q ss_pred cCCcEEEeecCCCCCCCCCcHHHHHHHHH-HhCCcEEEEecCCCCCCC--CCcCCCCCceEEEcccccCccccEEEEeCC
Q 004809 248 DGVDVLSMSLGLDGVDLYEDPVAIATFAA-IEKNIFVSTSAGNQGPFI--GTLHNGIPWVMTVAAGTMDRELGATLTLGN 324 (729)
Q Consensus 248 ~gvdVIn~SlG~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~--~t~~~~~p~vitVgAst~d~~~~~~~~l~~ 324 (729)
.|++|||||||......+ +....++.++ .++|++||+||||+|... ...++.++++|+|||++..+.....
T Consensus 121 ~g~~Vin~S~G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~~~----- 194 (434)
T 1wmd_A 121 AGARIHTNSWGAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFGS----- 194 (434)
T ss_dssp TTCSEEEECCCBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGGCG-----
T ss_pred cCCeEEEecCCCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcccCc-----
Confidence 999999999998652222 3444555555 589999999999999764 3456788999999997643321000
Q ss_pred CcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccc
Q 004809 325 GNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQS 404 (729)
Q Consensus 325 g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~ 404 (729)
T Consensus 195 -------------------------------------------------------------------------------- 194 (434)
T 1wmd_A 195 -------------------------------------------------------------------------------- 194 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCC
Q 004809 405 SFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLA 484 (729)
Q Consensus 405 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~ 484 (729)
.....+.++.||++||+.+.+ +||||+|||++|+++++....
T Consensus 195 ------------------------------------~~~~~~~~a~fS~~G~~~~g~--~kpdi~ApG~~i~s~~~~~~~ 236 (434)
T 1wmd_A 195 ------------------------------------YADNINHVAQFSSRGPTKDGR--IKPDVMAPGTFILSARSSLAP 236 (434)
T ss_dssp ------------------------------------GGSCTTSBCTTSCCCCCTTSC--CCCCEEEECSSEEEECCTTCC
T ss_pred ------------------------------------ccCCCCccccccCCCCCCCCC--CCceEEcCCCCeEecCCCCCC
Confidence 011234789999999999876 999999999999999864321
Q ss_pred ccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCC-----CHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCC
Q 004809 485 VSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEW-----SPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATP 559 (729)
Q Consensus 485 ~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~-----sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~ 559 (729)
.... .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.. ...+
T Consensus 237 ~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-------------~~~~ 302 (434)
T 1wmd_A 237 DSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-------------GYPN 302 (434)
T ss_dssp GGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS-------------CSSC
T ss_pred Cccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC-------------CCCC
Confidence 1000 00113579999999999999999999999999876 899999999999987531 2356
Q ss_pred CCCCccccCccCcCCCC
Q 004809 560 IAMGAGHINPDKALDPG 576 (729)
Q Consensus 560 ~~~G~G~vn~~~Al~~g 576 (729)
+.||+|+||+.+|++..
T Consensus 303 ~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 303 GNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp TTTTTCBCCHHHHHTCE
T ss_pred ccCCcCeEeHHHhcccc
Confidence 78999999999999744
No 24
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=6.4e-47 Score=453.12 Aligned_cols=359 Identities=22% Similarity=0.240 Sum_probs=246.8
Q ss_pred CCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC---CChHHHHHHHHHHHH-----cCCcEE
Q 004809 182 RDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG---SFTSDIIAAIDQAII-----DGVDVL 253 (729)
Q Consensus 182 ~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~il~ai~~A~~-----~gvdVI 253 (729)
.|.+||||||||||||.. ++ .| +.||||+|+|+.+|+++..+ ++..+++.+|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~---~g-----~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS---RD-----VDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS---SS-----SCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CC---CC-----ceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478899999999999985 22 12 38999999999999997653 356778888888887 799999
Q ss_pred EeecCCCCCCCCCcHHHHHHHHHH-hCCcEEEEecCCCCCCCCC--cCC--CCCceEEEcccccCccccEEEEeCCCcEE
Q 004809 254 SMSLGLDGVDLYEDPVAIATFAAI-EKNIFVSTSAGNQGPFIGT--LHN--GIPWVMTVAAGTMDRELGATLTLGNGNTV 328 (729)
Q Consensus 254 n~SlG~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~t--~~~--~~p~vitVgAst~d~~~~~~~~l~~g~~~ 328 (729)
|||||........+.+..++.++. ++|++||+||||+|+...+ .++ ..+++|+|||++.+.........
T Consensus 338 NmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~------ 411 (1354)
T 3lxu_X 338 NMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM------ 411 (1354)
T ss_dssp EECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------
T ss_pred EcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc------
Confidence 999998754444667777877876 8999999999999986544 344 37999999997643321100000
Q ss_pred EeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccE
Q 004809 329 TGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPA 408 (729)
Q Consensus 329 ~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~ 408 (729)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCcccc
Q 004809 409 VFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQT 488 (729)
Q Consensus 409 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~ 488 (729)
.....+.++.||||||+.+++ +||||+|||++|+++....
T Consensus 412 --------------------------------~~~~~g~~asFSS~GPt~dg~--~KpDIaAPG~~I~St~~~~------ 451 (1354)
T 3lxu_X 412 --------------------------------REKLPGNVYTWTSRDPCIDGG--QGVTVCAPGGAIASVPQFT------ 451 (1354)
T ss_dssp --------------------------------------CCCCCCCCSCCSSSS--CCEEEEEEC----------------
T ss_pred --------------------------------ccCCCCccccccCCCCCccCC--CcceEEecCceEEEeecCC------
Confidence 001124789999999998866 9999999999999875532
Q ss_pred CCCCCCCCceeeccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCCc
Q 004809 489 NSKLSFSNFNLQSGTSMACPQAAGIAALLRG----AHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMGA 564 (729)
Q Consensus 489 ~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G~ 564 (729)
.+.|..++|||||||||||++|||++ ++|+|++.+||++|++||++... .+++.||+
T Consensus 452 -----~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~--------------~~~~~~G~ 512 (1354)
T 3lxu_X 452 -----MSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY--------------VDPFAQGH 512 (1354)
T ss_dssp ----------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT--------------SCTTTSSS
T ss_pred -----CCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC--------------CCcccccC
Confidence 25789999999999999999999976 89999999999999999998743 24568999
Q ss_pred cccCccCcCCCCccccCChhhHHHHhhhcCCCc-cceeEeccccccccCCCCCCCCCCceeeeeccCCCceeEEEEEEEE
Q 004809 565 GHINPDKALDPGLIYDATTEDYVSLLCALNLTM-KRIQTITRSYSVNCSTSSLDLNYPSFIAFFNANESKSVQEFQRTVT 643 (729)
Q Consensus 565 G~vn~~~Al~~glv~d~~~~dy~~~lc~~~~~~-~~~~~~~~~~~~~c~~~~~~lN~ps~~~~~~~~~~~~~~~~~rtvt 643 (729)
|+||+.+|++..+.|+..+.+|+.|+|..+... ..| ..+. + .+ +... ...++++-+..
T Consensus 513 GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgI--ylR~--------~-~~--~~~~--------~~tv~V~p~f~ 571 (1354)
T 3lxu_X 513 GLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGI--HLRQ--------G-VQ--RNSI--------DYNVYIEPIFY 571 (1354)
T ss_dssp SBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSE--EECS--------S-CC--CSCE--------EEEEEEEEEES
T ss_pred CEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCce--EEec--------c-cc--CCce--------EEEEEEeeeec
Confidence 999999999999999999999999999987532 222 1111 0 00 0100 01223333332
Q ss_pred ecC--CCCeE----EEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEecCCCCCCCeeEEEEEEEEEcC---CceEE
Q 004809 644 NVG--EGVST----YTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQMDEETVVAFCYLSWIETG---GKHVV 714 (729)
Q Consensus 644 nvg--~~~~t----Y~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~l~~~~~~---~~~~v 714 (729)
|-. +.... -++.+...+ --|. .|..|.+ .++.++|.|+++.+.... +..+++|...|.+ ..+..
T Consensus 572 ~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~~L~~---G~h~~~v~~~D~~~~~~gp~f 644 (1354)
T 3lxu_X 572 NDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPTGLQP---GVHSAVIRAYDTDCVQKGSLF 644 (1354)
T ss_dssp SCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGGGCCS---EEEEEEEEEEESSCTTSCCSE
T ss_pred CcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCCCCCC---cceeEEEEEEEcCCcccCceE
Confidence 211 11111 222222221 1222 2666666 477889999999876433 4789999988643 36899
Q ss_pred EEEEEEEe
Q 004809 715 KSPIVVTS 722 (729)
Q Consensus 715 ~~P~~~~~ 722 (729)
|+||.|..
T Consensus 645 ~ipvTv~~ 652 (1354)
T 3lxu_X 645 EIPVTVVQ 652 (1354)
T ss_dssp EEEEEEEE
T ss_pred EeeEEEEe
Confidence 99998764
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.2e-46 Score=394.26 Aligned_cols=235 Identities=29% Similarity=0.381 Sum_probs=200.0
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|..+++|+||+|+|||||||++||+|.++ ++..++|.+..
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~~---------- 61 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVDND---------- 61 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTTTB----------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccCCC----------
Confidence 46899999999999999999999999999753 23333443321
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHc--CCcEEE
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIID--GVDVLS 254 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~--gvdVIn 254 (729)
..+.|..+|||||||||+|+. .||||+|+|+.+|+++..+ ++.+++++||+|+++. +++|||
T Consensus 62 -~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin 126 (284)
T 1sh7_A 62 -ADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVAN 126 (284)
T ss_dssp -SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEE
T ss_pred -CCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEE
Confidence 236688999999999999872 5999999999999998776 7788999999999984 799999
Q ss_pred eecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC-CCcCCCCCceEEEcccccCccccEEEEeCCCcEEEeeee
Q 004809 255 MSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFI-GTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSL 333 (729)
Q Consensus 255 ~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~ 333 (729)
||||.. ....+..++.++.++|++||+||||+|... ...++..|++|+|||++.
T Consensus 127 ~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------------- 181 (284)
T 1sh7_A 127 MSLGGG----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS--------------------- 181 (284)
T ss_dssp ECCCBS----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT---------------------
T ss_pred eCCCCC----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC---------------------
Confidence 999975 346777888889999999999999999754 345678899999998542
Q ss_pred cCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEech
Q 004809 334 YPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNS 413 (729)
Q Consensus 334 ~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~ 413 (729)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCC
Q 004809 414 KTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLS 493 (729)
Q Consensus 414 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~ 493 (729)
.+.++.||++||. |||+|||++|+++++.
T Consensus 182 -------------------------------~~~~~~~S~~G~~--------~di~ApG~~i~s~~~~------------ 210 (284)
T 1sh7_A 182 -------------------------------SDSRSSFSNWGSC--------VDLFAPGSQIKSAWYD------------ 210 (284)
T ss_dssp -------------------------------TSBBCTTCCBSTT--------CCEEEECSSEEEECTT------------
T ss_pred -------------------------------CCCcCcccCCCCc--------cEEEeccCCeEEecCC------------
Confidence 1256899999985 4999999999999874
Q ss_pred CCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 004809 494 FSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTD 541 (729)
Q Consensus 494 ~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~ 541 (729)
+.|..++|||||||||||++|||+|++|+|++++||++|++||++..
T Consensus 211 -~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 211 -GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp -SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred -CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 47999999999999999999999999999999999999999999764
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=3.4e-46 Score=392.02 Aligned_cols=237 Identities=30% Similarity=0.361 Sum_probs=199.4
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|..+++|+||+|+|||||||++||+|.++ +...++|.++
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~~----------- 62 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFIDN----------- 62 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTTT-----------
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCCC-----------
Confidence 45799999999999999999999999999754 2223344322
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHH--cCCcEEE
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAII--DGVDVLS 254 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~--~gvdVIn 254 (729)
...+.|..+|||||||||+|+. .||||+|+|+.+|++++.+ +..+++++||+|+++ .|++|||
T Consensus 63 ~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin 128 (278)
T 2b6n_A 63 DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVAN 128 (278)
T ss_dssp BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEE
T ss_pred CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEE
Confidence 1235788999999999999862 5999999999999998776 788899999999997 5899999
Q ss_pred eecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcCCCCCceEEEcccccCccccEEEEeCCCcEEEeeee
Q 004809 255 MSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIG-TLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSL 333 (729)
Q Consensus 255 ~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~ 333 (729)
||||... ...+..++.++.++|++||+||||+|.... ..+...+++|+|||++.
T Consensus 129 ~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------------- 183 (278)
T 2b6n_A 129 MSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS--------------------- 183 (278)
T ss_dssp ECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------------
T ss_pred ECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC---------------------
Confidence 9999753 466777788889999999999999997543 34678899999998542
Q ss_pred cCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEech
Q 004809 334 YPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNS 413 (729)
Q Consensus 334 ~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~ 413 (729)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCC
Q 004809 414 KTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLS 493 (729)
Q Consensus 414 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~ 493 (729)
.+.++.||++|| +|||+|||++|++++...
T Consensus 184 -------------------------------~~~~~~~S~~G~--------~~di~ApG~~i~s~~~~~----------- 213 (278)
T 2b6n_A 184 -------------------------------NDSRSSFSNYGT--------CLDIYAPGSSITSSWYTS----------- 213 (278)
T ss_dssp -------------------------------TSBBCTTCCBST--------TCCEEEECSSEEEECTTS-----------
T ss_pred -------------------------------CCCcCCcCCCCC--------CCeEEeCCCCeECcccCC-----------
Confidence 125688999998 459999999999998642
Q ss_pred CCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 004809 494 FSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTD 541 (729)
Q Consensus 494 ~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~ 541 (729)
...|..++|||||||||||++|||+|++|+|++.+||++|++||++..
T Consensus 214 ~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 214 NSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp TTCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CCCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 257899999999999999999999999999999999999999998753
No 27
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=9.8e-47 Score=437.00 Aligned_cols=296 Identities=23% Similarity=0.205 Sum_probs=205.3
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|..+++|+||+|||||||||++||+|.++- +.+.++|..+..
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~~--------- 104 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGSD--------- 104 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCSS---------
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCCC---------
Confidence 458999999999999999999999999998540 112233332210
Q ss_pred CCCCCC-CCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCCCh--HHHHHHHHHHHHcCCcEEE
Q 004809 178 MNSPRD-ANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGSFT--SDIIAAIDQAIIDGVDVLS 254 (729)
Q Consensus 178 ~~~~~D-~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~--~~il~ai~~A~~~gvdVIn 254 (729)
...|.| ..||||||||||||. .++ .| +.||||+|+|+.+|+++..+... ..+++....+..++++|||
T Consensus 105 d~~p~d~~~gHGT~vAGiiaa~-~n~---~g-----~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin 175 (600)
T 2oxa_A 105 DPTPTDPDTGHGTSVSGIIAAV-DNA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFN 175 (600)
T ss_dssp CCCCCSTTCCHHHHHHHHHHCC-SSS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEE
T ss_pred CCCCCCCCCCCccHHHHHhhcc-cCC---Cc-----ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEE
Confidence 122444 789999999999998 322 12 37999999999999998776442 3444544457788999999
Q ss_pred eecCCCCC-CCCC----cHHHHHHHH---HHhCCcEEEEecCCCCCCC----------------------CCcCCCCCce
Q 004809 255 MSLGLDGV-DLYE----DPVAIATFA---AIEKNIFVSTSAGNQGPFI----------------------GTLHNGIPWV 304 (729)
Q Consensus 255 ~SlG~~~~-~~~~----~~~~~a~~~---a~~~Gi~vV~AAGN~G~~~----------------------~t~~~~~p~v 304 (729)
||||.... .... ..+..++.. +.++|++||+||||+|... ....+.++|+
T Consensus 176 ~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~v 255 (600)
T 2oxa_A 176 HSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWN 255 (600)
T ss_dssp ECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSE
T ss_pred EeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCcee
Confidence 99998642 1122 223333322 4478999999999998631 1112345667
Q ss_pred EEEcccccCccccEEEEeCCCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhC
Q 004809 305 MTVAAGTMDRELGATLTLGNGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNA 384 (729)
Q Consensus 305 itVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~ 384 (729)
|+|||++
T Consensus 256 ItVgA~~------------------------------------------------------------------------- 262 (600)
T 2oxa_A 256 LVVSALN------------------------------------------------------------------------- 262 (600)
T ss_dssp EEEEEEC-------------------------------------------------------------------------
T ss_pred EEEeccc-------------------------------------------------------------------------
Confidence 7777743
Q ss_pred CceEEEEEecCCCceeeccccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCc
Q 004809 385 SVSGGVFISDFDGLEFFLQSSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVL 464 (729)
Q Consensus 385 Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~il 464 (729)
..+.++.||++||..
T Consensus 263 -----------------------------------------------------------~~g~~a~fS~~G~~v------ 277 (600)
T 2oxa_A 263 -----------------------------------------------------------ADGVRSSYSSVGSNI------ 277 (600)
T ss_dssp -----------------------------------------------------------TTSSBCTTCCBCTTE------
T ss_pred -----------------------------------------------------------CCCCcCCcCCCCCCe------
Confidence 123678999999976
Q ss_pred cCcEEecCCCEEeecCCCCCcc---------------------ccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCC
Q 004809 465 KPDVMAPGDSILAAWPSNLAVS---------------------QTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPE 523 (729)
Q Consensus 465 KPDI~APG~~I~sa~~~~~~~~---------------------~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~ 523 (729)
||+|||++|.+..+.-.... ....+.....|..++|||||||||||+||||+|++|+
T Consensus 278 --dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s~~P~ 355 (600)
T 2oxa_A 278 --FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPD 355 (600)
T ss_dssp --EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTT
T ss_pred --EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHHhCCC
Confidence 99999999655433210000 0000111234899999999999999999999999999
Q ss_pred CCHHHHHHHHHhccccCCCCCCCcc--------------------cCCCCCCCCCCCCCCccccCccCcCCCCccc
Q 004809 524 WSPAAIRSAIMTTSDSTDNTNSDIK--------------------DIGDDNKPATPIAMGAGHINPDKALDPGLIY 579 (729)
Q Consensus 524 ~sp~~Ik~~L~~TA~~~~~~~~~~~--------------------~~~~~~~~~~~~~~G~G~vn~~~Al~~glv~ 579 (729)
|+|++||++|++||++++..+.++. ... ......+.||||+||+.+|++...-+
T Consensus 356 lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~--~g~~~~~~~G~G~vda~~Av~~A~~~ 429 (600)
T 2oxa_A 356 LSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNA--AGMWFSPTYGFGLIDVNKALELAANH 429 (600)
T ss_dssp SCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECT--TSCEEBTTTBTCBCCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccC--CCccccccCCCchhhHHHHHHHHHhc
Confidence 9999999999999999875542211 011 11224578999999999999855443
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=6.7e-46 Score=389.77 Aligned_cols=236 Identities=28% Similarity=0.371 Sum_probs=200.8
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|..+++|+||+|+|||||||++||+|.++ +...++|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------ 61 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALG------------ 61 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTS------------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCC------------
Confidence 56899999999999999999999999999754 222333322
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHc--CCcEEE
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIID--GVDVLS 254 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~--gvdVIn 254 (729)
....|..||||||||||+|.. .||||+|+|+.+|+++..+ +..++++++|+|+++. +++|||
T Consensus 62 -~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin 126 (276)
T 4dzt_A 62 -GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVAN 126 (276)
T ss_dssp -SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEE
T ss_pred -CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEE
Confidence 235678899999999999872 6999999999999998776 7888999999999987 899999
Q ss_pred eecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC-cCCCCCceEEEcccccCccccEEEEeCCCcEEEeeee
Q 004809 255 MSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGT-LHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGLSL 333 (729)
Q Consensus 255 ~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t-~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~~~ 333 (729)
||||... ...+..++..+.++|+++|+||||+|..... .+...+++|+|||++.
T Consensus 127 ~S~g~~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------------- 181 (276)
T 4dzt_A 127 MSLGGGV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS--------------------- 181 (276)
T ss_dssp ECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------------
T ss_pred ECCCCCC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC---------------------
Confidence 9999743 5677788888999999999999999976543 3678899999998532
Q ss_pred cCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEech
Q 004809 334 YPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFMNS 413 (729)
Q Consensus 334 ~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i~~ 413 (729)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCCCC
Q 004809 414 KTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSKLS 493 (729)
Q Consensus 414 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~~~ 493 (729)
.+.++.||++||.. ||+|||++|++++...
T Consensus 182 -------------------------------~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~----------- 211 (276)
T 4dzt_A 182 -------------------------------SDARASFSNYGSCV--------DLFAPGASIPSAWYTS----------- 211 (276)
T ss_dssp -------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTTS-----------
T ss_pred -------------------------------CCCcCCcCCCCCCc--------eEEeCCCCeEccccCC-----------
Confidence 22578999999864 9999999999998753
Q ss_pred CCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCC
Q 004809 494 FSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDN 542 (729)
Q Consensus 494 ~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~ 542 (729)
...|..++|||||||||||++|||+|++|++++++||++|++||++...
T Consensus 212 ~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 212 DTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp SSCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred CCceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 2479999999999999999999999999999999999999999998753
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=4.5e-46 Score=390.83 Aligned_cols=227 Identities=30% Similarity=0.361 Sum_probs=193.6
Q ss_pred CCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccCCC
Q 004809 100 AWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIAMN 179 (729)
Q Consensus 100 ~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 179 (729)
.|. ..+|+||+|+|||||||++||+|.++ +...++|.+
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~~-------------- 61 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYYY-------------- 61 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESSS--------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCCC--------------
Confidence 344 37899999999999999999999754 222333331
Q ss_pred CCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHcCC-------c
Q 004809 180 SPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIIDGV-------D 251 (729)
Q Consensus 180 ~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~gv-------d 251 (729)
.+.|..+|||||||||+|+ ..||||+|+|+.+|+++..+ ++.+++++||+|++++++ +
T Consensus 62 ~~~d~~gHGT~vAgiia~~--------------~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~ 127 (279)
T 2pwa_A 62 SSRDGNGHGTHCAGTVGSR--------------TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGV 127 (279)
T ss_dssp CSSCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEE
T ss_pred CCCCCCCCHHHHHHHHHhc--------------ccccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCcc
Confidence 2567899999999999987 26999999999999998876 788999999999999887 9
Q ss_pred EEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCC-CcCCCCCceEEEcccccCccccEEEEeCCCcEEEe
Q 004809 252 VLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIG-TLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTG 330 (729)
Q Consensus 252 VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g 330 (729)
|||||||.. ....+..++.++.++|++||+||||+|.... ..++..|++|+|||++.
T Consensus 128 Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------ 185 (279)
T 2pwa_A 128 VASLSLGGG----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR------------------ 185 (279)
T ss_dssp EEEECCCEE----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------------------
T ss_pred EEEecCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC------------------
Confidence 999999964 3567788888899999999999999997543 35678899999998542
Q ss_pred eeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEE
Q 004809 331 LSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVF 410 (729)
Q Consensus 331 ~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~ 410 (729)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred echhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCC
Q 004809 411 MNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNS 490 (729)
Q Consensus 411 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~ 490 (729)
.+.++.||++||. |||+|||++|+++++.
T Consensus 186 ----------------------------------~~~~~~~S~~G~~--------~di~APG~~i~s~~~~--------- 214 (279)
T 2pwa_A 186 ----------------------------------YDRRSSFSNYGSV--------LDIFGPGTDILSTWIG--------- 214 (279)
T ss_dssp ----------------------------------TSBBCTTCCBSTT--------CCEEEECSSEEEEETT---------
T ss_pred ----------------------------------CCCcCCcCCCCCc--------ceEEEecCCeEEeecC---------
Confidence 1256899999984 5999999999999874
Q ss_pred CCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccC
Q 004809 491 KLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDST 540 (729)
Q Consensus 491 ~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~ 540 (729)
+.|..++|||||||||||++|||+|+ |+++|.+||++|++||++.
T Consensus 215 ----~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 215 ----GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKG 259 (279)
T ss_dssp ----TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEES
T ss_pred ----CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccc
Confidence 47899999999999999999999999 9999999999999999975
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.2e-45 Score=416.00 Aligned_cols=291 Identities=17% Similarity=0.141 Sum_probs=214.0
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|..+++|+||+|||||||||++||+|.++-. ....++|.+.. ..+.+
T Consensus 28 ~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~~-----~~p~~ 77 (471)
T 1p8j_A 28 KEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASFDVNDQD-----PDPQP 77 (471)
T ss_dssp HHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCEETTTTB-----SCCCC
T ss_pred HHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcccccCCC-----CCCCC
Confidence 4599999999999999999999999999986400 00122332211 00111
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCCChHHHHHHHHHHHH-cCCcEEEee
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGSFTSDIIAAIDQAII-DGVDVLSMS 256 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~A~~-~gvdVIn~S 256 (729)
...+.|..+|||||||||||...++. | +.||||+|+|+.+|+++ +..+++++||+++++ ++++|||||
T Consensus 78 ~~~~~d~~gHGT~vAGiiaa~~~n~~---g-----~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S 146 (471)
T 1p8j_A 78 RYTQMNDNRHGTRCAGEVAAVANNGV---C-----GVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSAS 146 (471)
T ss_dssp CCCTTCTTCHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEEC
T ss_pred ccCCCCCCCcHHHHHHHHHeeccCCC---C-----CEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEec
Confidence 12456889999999999999753322 2 37999999999999985 446789999999999 999999999
Q ss_pred cCCCCCC----CCCcHHHHHHHHHH-----hCCcEEEEecCCCCCCCCC----cCCCCCceEEEcccccCccccEEEEeC
Q 004809 257 LGLDGVD----LYEDPVAIATFAAI-----EKNIFVSTSAGNQGPFIGT----LHNGIPWVMTVAAGTMDRELGATLTLG 323 (729)
Q Consensus 257 lG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~t----~~~~~p~vitVgAst~d~~~~~~~~l~ 323 (729)
||..... .....+..++..+. .+|++||+||||+|..... ....++++|+|||++.
T Consensus 147 ~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~----------- 215 (471)
T 1p8j_A 147 WGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ----------- 215 (471)
T ss_dssp CBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT-----------
T ss_pred cCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC-----------
Confidence 9975321 12233444555554 3699999999999975321 1234589999998542
Q ss_pred CCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeecc
Q 004809 324 NGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQ 403 (729)
Q Consensus 324 ~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~ 403 (729)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCC
Q 004809 404 SSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNL 483 (729)
Q Consensus 404 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~ 483 (729)
.+.++.||++||..... .+|+..+||.+|+++....
T Consensus 216 -----------------------------------------~g~~a~~S~~g~~~~~~--~~~~~~~~g~~i~st~~~~- 251 (471)
T 1p8j_A 216 -----------------------------------------FGNVPWYSEACSSTLAT--TYSSGNQNEKQIVTTDLRQ- 251 (471)
T ss_dssp -----------------------------------------TSCCCTTCCBCTTCCEE--EECCCSTTSCCEEEEETTT-
T ss_pred -----------------------------------------CCCcccccCCCCcceEE--eCCCCCCCCCCEEEeeCCC-
Confidence 12568899999987522 4555566678999987632
Q ss_pred CccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcccCCCCCCCCCCCCCC
Q 004809 484 AVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIKDIGDDNKPATPIAMG 563 (729)
Q Consensus 484 ~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~G 563 (729)
..|..++|||||||||||++|||+|++|+|++++||++|++||++.+.....+.... .....+..||
T Consensus 252 -----------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~--~g~~~~~~~G 318 (471)
T 1p8j_A 252 -----------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNG--VGRKVSHSYG 318 (471)
T ss_dssp -----------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECT--TSCEEBTTTB
T ss_pred -----------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecC--CCcccCCCCC
Confidence 468999999999999999999999999999999999999999998865432222211 1112356899
Q ss_pred ccccCccCcCCCCc
Q 004809 564 AGHINPDKALDPGL 577 (729)
Q Consensus 564 ~G~vn~~~Al~~gl 577 (729)
+|+||+.+|++...
T Consensus 319 ~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 319 YGLLDAGAMVALAQ 332 (471)
T ss_dssp TCBCCHHHHHHHHH
T ss_pred CEEEcHhHHHHHhh
Confidence 99999999997443
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=7.9e-45 Score=406.01 Aligned_cols=279 Identities=20% Similarity=0.167 Sum_probs=201.0
Q ss_pred CCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccCCC
Q 004809 100 AWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIAMN 179 (729)
Q Consensus 100 ~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 179 (729)
.|..+++|+||+|+|||||||++||+|.++- ......+.... ++ .....
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~~---dg--~~f~~ 66 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPEE---DG--TRFHR 66 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCCC---C--------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccCC---CC--ccccC
Confidence 7888999999999999999999999998640 00000110000 00 00002
Q ss_pred CCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHc------CCcE
Q 004809 180 SPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIID------GVDV 252 (729)
Q Consensus 180 ~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~------gvdV 252 (729)
.+.|..||||||||||+|+. .||||+|+|+.+|+++..| ++.+++++||+|+++. +++|
T Consensus 67 ~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~V 132 (546)
T 2qtw_B 67 QASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLV 132 (546)
T ss_dssp -CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEE
T ss_pred CCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeE
Confidence 35688999999999999872 5999999999999998777 7788999999999974 8999
Q ss_pred EEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCC-CCcCCCCCceEEEcccccCccccEEEEeCCCcEEEee
Q 004809 253 LSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFI-GTLHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTGL 331 (729)
Q Consensus 253 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~t~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g~ 331 (729)
||||||+. +...+..++..+.++|++||+||||+|... ...++..|++|+|||++.+...
T Consensus 133 INmSlGg~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~--------------- 193 (546)
T 2qtw_B 133 VLLPLAGG----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--------------- 193 (546)
T ss_dssp EEECEEEE----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB---------------
T ss_pred EEecCCCC----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc---------------
Confidence 99999964 356777888889999999999999999754 3346788999999996532210
Q ss_pred eecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEEe
Q 004809 332 SLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVFM 411 (729)
Q Consensus 332 ~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~i 411 (729)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCCC
Q 004809 412 NSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNSK 491 (729)
Q Consensus 412 ~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~~ 491 (729)
...-..||++|| ||||+|||++|+++++..
T Consensus 194 ---------------------------------a~~s~~fSn~G~--------~vDI~APG~~I~St~~~~--------- 223 (546)
T 2qtw_B 194 ---------------------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDC--------- 223 (546)
T ss_dssp ---------------------------------CEETTEECCBST--------TCCEEEECSSEEEECTTS---------
T ss_pred ---------------------------------ccccCCcCCCCC--------cceEEecCccEEeeccCC---------
Confidence 000012899997 569999999999998753
Q ss_pred CCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCcc-------cCCCCCCCCCCCCCCc
Q 004809 492 LSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNTNSDIK-------DIGDDNKPATPIAMGA 564 (729)
Q Consensus 492 ~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~~~~~~-------~~~~~~~~~~~~~~G~ 564 (729)
...|..++|||||||||||++|||+|++|+|+|++||++|++||.+.......+. ....-..+...+.+|+
T Consensus 224 --~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~ 301 (546)
T 2qtw_B 224 --STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGW 301 (546)
T ss_dssp --TTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTCC--C
T ss_pred --CCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhccCCcccccCC
Confidence 2478999999999999999999999999999999999999999986532211000 0000011224556788
Q ss_pred cc--cCccCcCC
Q 004809 565 GH--INPDKALD 574 (729)
Q Consensus 565 G~--vn~~~Al~ 574 (729)
|+ .++..+..
T Consensus 302 ~l~~~~~w~a~s 313 (546)
T 2qtw_B 302 QLFCRTVWSAHS 313 (546)
T ss_dssp CCEEEEEECCCC
T ss_pred CcchhchhccCC
Confidence 88 66666654
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=6.1e-45 Score=412.91 Aligned_cols=283 Identities=20% Similarity=0.197 Sum_probs=212.4
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|..+++|+||+|||||||||++||+|.++- + ..+.++|.++.. .
T Consensus 44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~~d~~~~~~--------~ 90 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGSWDFNDNTN--------L 90 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGCEETTTTBS--------C
T ss_pred HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCcccCCCCCC--------C
Confidence 458999999999999999999999999998641 0 012233332210 1
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCCCChHHHHHHHHHHHHcCCcEEEeec
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEGSFTSDIIAAIDQAIIDGVDVLSMSL 257 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~A~~~gvdVIn~Sl 257 (729)
.....|..||||||||||||...++. | +.||||+|+|+.+|+++.. ++..++++||++|++.+ +||||||
T Consensus 91 ~~p~~d~~gHGT~vAGiiaa~~~n~~---~-----~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~ 160 (503)
T 2id4_A 91 PKPRLSDDYHGTRCAGEIAAKKGNNF---C-----GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSW 160 (503)
T ss_dssp CCCCSTTTTHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECE
T ss_pred CCCCCCCCChHHHHHHHHHhccCCCC---C-----cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCC
Confidence 11235788999999999999753321 2 3799999999999998643 67889999999999988 9999999
Q ss_pred CCCCCC----CCCcHHHHHHHHHH-----hCCcEEEEecCCCCCCCC--CcC--CCCCceEEEcccccCccccEEEEeCC
Q 004809 258 GLDGVD----LYEDPVAIATFAAI-----EKNIFVSTSAGNQGPFIG--TLH--NGIPWVMTVAAGTMDRELGATLTLGN 324 (729)
Q Consensus 258 G~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~--t~~--~~~p~vitVgAst~d~~~~~~~~l~~ 324 (729)
|..... .....+..++..+. .+|++||+||||+|.... ..+ ..++++|+|||++.
T Consensus 161 G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~------------ 228 (503)
T 2id4_A 161 GPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH------------ 228 (503)
T ss_dssp ESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT------------
T ss_pred CcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC------------
Confidence 975321 12344556666665 479999999999996532 222 25678999998542
Q ss_pred CcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccc
Q 004809 325 GNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQS 404 (729)
Q Consensus 325 g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~ 404 (729)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEe----cCCCEEeecC
Q 004809 405 SFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMA----PGDSILAAWP 480 (729)
Q Consensus 405 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~A----PG~~I~sa~~ 480 (729)
.+.++.||++||.. |++| ||..|+++..
T Consensus 229 ----------------------------------------~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~~ 260 (503)
T 2id4_A 229 ----------------------------------------KDLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSDI 260 (503)
T ss_dssp ----------------------------------------TSCCCTTCCCCTTE--------EEEEECSBTTBCEEEECS
T ss_pred ----------------------------------------CCCcCCcCCCCCcc--------eEeecCCCCCCceEeecC
Confidence 12568999999976 7877 8999999954
Q ss_pred CCCCccccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCC-CCCcccCCCCCCCCCC
Q 004809 481 SNLAVSQTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDNT-NSDIKDIGDDNKPATP 559 (729)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~~-~~~~~~~~~~~~~~~~ 559 (729)
.. ..|..++|||||||||||++|||+|++|+|++++||++|++||+++... ...+.... ......
T Consensus 261 ~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~--~g~~~~ 326 (503)
T 2id4_A 261 NG------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSA--MGKKYS 326 (503)
T ss_dssp TT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECS--SSSEEB
T ss_pred CC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecC--CCCccC
Confidence 32 5799999999999999999999999999999999999999999987643 11111111 111234
Q ss_pred CCCCccccCccCcCCCCc
Q 004809 560 IAMGAGHINPDKALDPGL 577 (729)
Q Consensus 560 ~~~G~G~vn~~~Al~~gl 577 (729)
..||+|+||+.+|++...
T Consensus 327 ~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 327 HRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp TTTBTCBCCHHHHHHHHT
T ss_pred cccCCcEecHHHHHHHHh
Confidence 589999999999997433
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=8.7e-45 Score=381.88 Aligned_cols=229 Identities=32% Similarity=0.382 Sum_probs=194.3
Q ss_pred CCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccCCC
Q 004809 100 AWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIAMN 179 (729)
Q Consensus 100 ~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~~~ 179 (729)
+|... +|+||+|+|||||||++||+|.++ +...+.|..+
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~------------- 63 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAST------------- 63 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSSS-------------
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCCC-------------
Confidence 56655 899999999999999999999754 2333333321
Q ss_pred CCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHHHHHHHcC-------Cc
Q 004809 180 SPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAIDQAIIDG-------VD 251 (729)
Q Consensus 180 ~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai~~A~~~g-------vd 251 (729)
..|..||||||||||+|+. .||||+|+|+.+|+++..+ +..++++++|+++++++ ++
T Consensus 64 -~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~ 128 (279)
T 3f7m_A 64 -ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRT 128 (279)
T ss_dssp -SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEE
T ss_pred -CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCe
Confidence 2378899999999999862 6999999999999998776 78889999999999886 89
Q ss_pred EEEeecCCCCCCCCCcHHHHHHHHHHhCCcEEEEecCCCCCCCCC-cCCCCCceEEEcccccCccccEEEEeCCCcEEEe
Q 004809 252 VLSMSLGLDGVDLYEDPVAIATFAAIEKNIFVSTSAGNQGPFIGT-LHNGIPWVMTVAAGTMDRELGATLTLGNGNTVTG 330 (729)
Q Consensus 252 VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~t-~~~~~p~vitVgAst~d~~~~~~~~l~~g~~~~g 330 (729)
|||||||.. +...+..++..+.++|++||+||||+|..... .++..+++|+|||++.
T Consensus 129 Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------ 186 (279)
T 3f7m_A 129 VASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS------------------ 186 (279)
T ss_dssp EEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT------------------
T ss_pred EEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC------------------
Confidence 999999964 46778888889999999999999999976433 3678899999998542
Q ss_pred eeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCceeeccccccEEE
Q 004809 331 LSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLEFFLQSSFPAVF 410 (729)
Q Consensus 331 ~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~p~~~ 410 (729)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred echhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCCCCCccccCC
Q 004809 411 MNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPSNLAVSQTNS 490 (729)
Q Consensus 411 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~~~~~~~~~~ 490 (729)
.+.++.||++||. |||+|||++|+++++.
T Consensus 187 ----------------------------------~~~~~~~S~~g~~--------~di~ApG~~i~s~~~~--------- 215 (279)
T 3f7m_A 187 ----------------------------------NDVRSTFSNYGRV--------VDIFAPGTSITSTWIG--------- 215 (279)
T ss_dssp ----------------------------------TSBBCTTCCBSTT--------CCEEEECSSEEEECGG---------
T ss_pred ----------------------------------CCCCCCCCCCCCC--------CeEEECCCCeEeecCC---------
Confidence 1257899999984 4999999999999874
Q ss_pred CCCCCCceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCC
Q 004809 491 KLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEWSPAAIRSAIMTTSDSTDN 542 (729)
Q Consensus 491 ~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~~~~~ 542 (729)
+.|..++|||||||||||++|||+|++|+ ++++||++|++||++...
T Consensus 216 ----~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~ 262 (279)
T 3f7m_A 216 ----GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVL 262 (279)
T ss_dssp ----GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCC
T ss_pred ----CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccccc
Confidence 46899999999999999999999999999 999999999999997643
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.6e-42 Score=402.81 Aligned_cols=295 Identities=22% Similarity=0.226 Sum_probs=198.6
Q ss_pred CCCCcCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCCccCcccCCCeeeceeeccccccccCCCCccC
Q 004809 98 SGAWPVSKFGKDIIIGVVDTGVWPESESYNDGGMTEIPSRWKGECESGTQFNSSLCNKKLIGARFFNKGLLAKNPTITIA 177 (729)
Q Consensus 98 ~~~w~~~~~G~gvvVgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 177 (729)
..+|.++++|+||+|||||||||++||+|.++ ...+.++|..+.. +
T Consensus 60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n--------------------------~~~~~~~~~~~~~--------d 105 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN--------------------------VRPGSKNVVTGSD--------D 105 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG--------------------------BCSCCBCTTTSSS--------C
T ss_pred HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc--------------------------cccCcceeecCCC--------C
Confidence 34899999999999999999999999999864 0112223322211 1
Q ss_pred CCCCCCCCCChhHHHHHhcccCcCCCccccccccceeeccCCCEEEEEEeecCCC-CChHHHHHHH-HHHHHcCCcEEEe
Q 004809 178 MNSPRDANGHGTHTSSTAAGSYVERASYFGYAIGTALGTAPLARVAMYKALWNEG-SFTSDIIAAI-DQAIIDGVDVLSM 255 (729)
Q Consensus 178 ~~~~~D~~gHGTHVAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~il~ai-~~A~~~gvdVIn~ 255 (729)
.....|.++|||||||||||.. +..| +.||||+|+|+.+|++++.+ +..++++.|+ +++..++++|||+
T Consensus 106 p~p~~~~~gHGThVAGiIAa~~----n~~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~ 176 (600)
T 3hjr_A 106 PTPTDPDTAHGTSVSGIIAAVD----NAIG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQ 176 (600)
T ss_dssp CCCCSTTCCHHHHHHHHHHCCS----SSSS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEE
T ss_pred CCCCCCCCChHHHHHHHHhEeC----CCCC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEec
Confidence 1223467899999999999852 2223 27999999999999998776 6677777666 6778899999999
Q ss_pred ecCCCCC-CCCCcHH-----HHHHHHH--HhCCcEEEEecCCCCCCCCC----------------------cCCCCCceE
Q 004809 256 SLGLDGV-DLYEDPV-----AIATFAA--IEKNIFVSTSAGNQGPFIGT----------------------LHNGIPWVM 305 (729)
Q Consensus 256 SlG~~~~-~~~~~~~-----~~a~~~a--~~~Gi~vV~AAGN~G~~~~t----------------------~~~~~p~vi 305 (729)
|||.... +...+.. ..++..+ ..+|+++|+||||.+..... ..+..+++|
T Consensus 177 S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~I 256 (600)
T 3hjr_A 177 SYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNL 256 (600)
T ss_dssp CCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEE
T ss_pred ccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCcce
Confidence 9997532 2222221 1111122 25799999999997632100 011223333
Q ss_pred EEcccccCccccEEEEeCCCcEEEeeeecCCCCCCceeeEEEcCCcccccccccCCceEEEEccCCCchhhHHHHHHhCC
Q 004809 306 TVAAGTMDRELGATLTLGNGNTVTGLSLYPGNSSLIDFPIVFMDECLNLAELKKVGQKIVVCQDKNDSLSNQVDNIQNAS 385 (729)
Q Consensus 306 tVgAst~d~~~~~~~~l~~g~~~~g~~~~~~~~~~~~~~lv~~~~c~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~G 385 (729)
+|||.
T Consensus 257 sVgA~--------------------------------------------------------------------------- 261 (600)
T 3hjr_A 257 VVSAL--------------------------------------------------------------------------- 261 (600)
T ss_dssp EEEEE---------------------------------------------------------------------------
T ss_pred EEeee---------------------------------------------------------------------------
Confidence 33332
Q ss_pred ceEEEEEecCCCceeeccccccEEEechhhHHHHHHHHhhcCCcEEEEEecceeecCCCCCceecccCCCCCCCCCCCcc
Q 004809 386 VSGGVFISDFDGLEFFLQSSFPAVFMNSKTGDILKDYIKIENNATATIQFQKTELGTKPAPSVASYSSRGPSISCPFVLK 465 (729)
Q Consensus 386 a~g~i~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~FSS~GP~~~~~~ilK 465 (729)
...+.++.||++|+..
T Consensus 262 ---------------------------------------------------------~~~g~~a~yS~~G~~v------- 277 (600)
T 3hjr_A 262 ---------------------------------------------------------NADGVRSSYSSVGSNI------- 277 (600)
T ss_dssp ---------------------------------------------------------CTTSSBCTTCCBCTTC-------
T ss_pred ---------------------------------------------------------cCCCCEeecccCCcce-------
Confidence 2334678999999876
Q ss_pred CcEEecCCCE-------Eee-cCCCCC---------cc----ccCCCCCCCCceeeccccchhHHHHHHHHHHHhhCCCC
Q 004809 466 PDVMAPGDSI-------LAA-WPSNLA---------VS----QTNSKLSFSNFNLQSGTSMACPQAAGIAALLRGAHPEW 524 (729)
Q Consensus 466 PDI~APG~~I-------~sa-~~~~~~---------~~----~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~~ 524 (729)
+++|||..+ +.+ .++... .. ..........|..++|||||||||||++|||+|+||+|
T Consensus 278 -~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~l 356 (600)
T 3hjr_A 278 -FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDL 356 (600)
T ss_dssp -CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTS
T ss_pred -eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCC
Confidence 788888753 211 111000 00 00111223568899999999999999999999999999
Q ss_pred CHHHHHHHHHhccccCCCCCCCccc--------------------CCCCCCCCCCCCCCccccCccCcCCCCc
Q 004809 525 SPAAIRSAIMTTSDSTDNTNSDIKD--------------------IGDDNKPATPIAMGAGHINPDKALDPGL 577 (729)
Q Consensus 525 sp~~Ik~~L~~TA~~~~~~~~~~~~--------------------~~~~~~~~~~~~~G~G~vn~~~Al~~gl 577 (729)
+++|||++|++||++++....|+.. .. ........||||+||+.+|++...
T Consensus 357 t~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~--aG~~~s~~yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 357 SVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNA--AGMWFSPTYGFGLIDVNKALELAA 427 (600)
T ss_dssp CHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECT--TSCEEBTTTBTCBCCHHHHHHHHT
T ss_pred CHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCccccc--CCceEccccCCceecHHHHHHHhh
Confidence 9999999999999999877655321 11 111124579999999999987443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=9.2e-25 Score=248.33 Aligned_cols=96 Identities=22% Similarity=0.241 Sum_probs=77.4
Q ss_pred eeeccCCCEEEEEEeecCCCCChHHHHHHHHHHHH---cCCcEEEeecCCCCCCC---CCcHHHHHHHHHHhCCcEEEEe
Q 004809 213 ALGTAPLARVAMYKALWNEGSFTSDIIAAIDQAII---DGVDVLSMSLGLDGVDL---YEDPVAIATFAAIEKNIFVSTS 286 (729)
Q Consensus 213 ~~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~A~~---~gvdVIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi~vV~A 286 (729)
+.||||+|+|+.|++. ...++++++|++|+. ++++|||+|||...... +...+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999983 356789999999998 78999999999754221 1245666677888999999999
Q ss_pred cCCCCCCC--------CCcCCCCCceEEEccccc
Q 004809 287 AGNQGPFI--------GTLHNGIPWVMTVAAGTM 312 (729)
Q Consensus 287 AGN~G~~~--------~t~~~~~p~vitVgAst~ 312 (729)
|||+|... ...++.+||+++||+++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999643 345678899999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=9.4e-22 Score=213.24 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=80.8
Q ss_pred eeccCCCEEEEEEeecCCCCChHHHHHHHHHHHH-cCCcEEEeecCCCCC----CCCCcHHHHHHHHHHhCCcEEEEecC
Q 004809 214 LGTAPLARVAMYKALWNEGSFTSDIIAAIDQAII-DGVDVLSMSLGLDGV----DLYEDPVAIATFAAIEKNIFVSTSAG 288 (729)
Q Consensus 214 ~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~A~~-~gvdVIn~SlG~~~~----~~~~~~~~~a~~~a~~~Gi~vV~AAG 288 (729)
..+||+|+++.|++.+..+++.++++.+|+||++ ++++|||+|||.... ..+.+.+..++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4579999999999987656788899999999997 899999999997431 12234566777788899999999999
Q ss_pred CCCCCC-------------CCcCCCCCceEEEcccccC
Q 004809 289 NQGPFI-------------GTLHNGIPWVMTVAAGTMD 313 (729)
Q Consensus 289 N~G~~~-------------~t~~~~~p~vitVgAst~d 313 (729)
|+|... ...++.+||+++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 999653 2455788999999998653
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.89 E-value=6.2e-10 Score=125.67 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=63.3
Q ss_pred eeccCCCEEEEEEeecCCCCChHHHHHHHHHHH--HcCCcEEEeecCCCCCC---CCCcHHHHHHHHHHhCCcEEEEecC
Q 004809 214 LGTAPLARVAMYKALWNEGSFTSDIIAAIDQAI--IDGVDVLSMSLGLDGVD---LYEDPVAIATFAAIEKNIFVSTSAG 288 (729)
Q Consensus 214 ~GvAP~A~l~~~kv~~~~g~~~~~il~ai~~A~--~~gvdVIn~SlG~~~~~---~~~~~~~~a~~~a~~~Gi~vV~AAG 288 (729)
.++++...++.|-.... ......++..+++.. .+-++|||+|||..... .+...+...+..+..+||.|++|+|
T Consensus 262 ~a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASG 340 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASG 340 (544)
T ss_dssp HHHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence 35555666655533211 112234454444433 24589999999975422 2234455666678899999999999
Q ss_pred CCCCCC----------CCcCCCCCceEEEccccc
Q 004809 289 NQGPFI----------GTLHNGIPWVMTVAAGTM 312 (729)
Q Consensus 289 N~G~~~----------~t~~~~~p~vitVgAst~ 312 (729)
|+|... ...++..|||++||+++.
T Consensus 341 D~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 341 DSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp SSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999643 245678999999999864
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.70 E-value=5.6e-09 Score=93.35 Aligned_cols=62 Identities=18% Similarity=0.083 Sum_probs=54.0
Q ss_pred ccccHHHHHHHHhcccccccccccccccccCCCceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEcCCccCC
Q 004809 9 AFRGQHGWYSATLQSVSGNVEANTNIFNNISSSKLLYTYSHVLNGFSASLTPAELEALKSSPGYISSIRDLPVKP 83 (729)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 83 (729)
...+|++|+.+++.+... ..+++|+|++.||||+++|+++++++|+++|+|.+||||+.++.
T Consensus 52 ~~~~h~~~l~s~~~~~~~-------------~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 52 QSERTARRLQAQAARRGY-------------LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp HHHHHHHHHHHHHHHTTC-------------CCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhhccc-------------CCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 455799999999876222 57899999999999999999999999999999999999987653
No 39
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.48 E-value=5.2e-07 Score=87.59 Aligned_cols=88 Identities=14% Similarity=0.115 Sum_probs=71.8
Q ss_pred Cccccccc-cc-------CCceEEEEccCC-CchhhHHHHHHhCCceEEEEEecC-CCcee-e---cc-ccccEEEechh
Q 004809 350 ECLNLAEL-KK-------VGQKIVVCQDKN-DSLSNQVDNIQNASVSGGVFISDF-DGLEF-F---LQ-SSFPAVFMNSK 414 (729)
Q Consensus 350 ~c~~~~~~-~~-------~~gkiv~~~~g~-~~~~~~~~~~~~~Ga~g~i~~~~~-~~~~~-~---~~-~~~p~~~i~~~ 414 (729)
.|.+.... .. .+|||+|++||. |+|.+|..+++++||.++|++|+. .+... . .+ ..||+++|+..
T Consensus 85 GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~Is~~ 164 (194)
T 3icu_A 85 ACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNL 164 (194)
T ss_dssp CCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEECHH
T ss_pred CCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEECHH
Confidence 59877654 22 478999999999 999999999999999999999983 33221 1 12 57999999999
Q ss_pred hHHHHHHHHhhcCCcEEEEEecc
Q 004809 415 TGDILKDYIKIENNATATIQFQK 437 (729)
Q Consensus 415 ~g~~l~~~~~~~~~~~~~i~~~~ 437 (729)
+|+.|++++..+...+.+|.+..
T Consensus 165 ~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 165 KGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999988888877653
No 40
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.27 E-value=7.5e-07 Score=74.24 Aligned_cols=47 Identities=21% Similarity=0.249 Sum_probs=43.4
Q ss_pred CCceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEcCCccCCCCCC
Q 004809 40 SSKLLYTYSHVLNGFSASLTPAELEALKSSPGYISSIRDLPVKPHTTH 87 (729)
Q Consensus 40 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~ 87 (729)
..+++|+|++ |+||+++|+++++++|+++|+|.+||||+.++++++.
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 4689999998 9999999999999999999999999999999987764
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.14 E-value=9.5e-07 Score=79.86 Aligned_cols=44 Identities=23% Similarity=0.204 Sum_probs=40.8
Q ss_pred CCceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEcCCccCC
Q 004809 40 SSKLLYTYSHVLNGFSASLTPAELEALKSSPGYISSIRDLPVKP 83 (729)
Q Consensus 40 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 83 (729)
..+++|+|++.||||+++|+++++++|+++|+|.+|++++.++.
T Consensus 80 g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 80 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 46899999999999999999999999999999999999987653
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.62 E-value=4.5e-05 Score=62.67 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=38.7
Q ss_pred CceEEEe-cceeeEEEEEeCHHHHHHhhcC--CCeEEEEcCCccCC
Q 004809 41 SKLLYTY-SHVLNGFSASLTPAELEALKSS--PGYISSIRDLPVKP 83 (729)
Q Consensus 41 ~~~~~~y-~~~~ng~s~~l~~~~~~~L~~~--p~V~~V~~~~~~~~ 83 (729)
.++.|.| ...|+||+++++++++++|+++ |.|.+||+|+.+++
T Consensus 30 g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 30 GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 4688999 4799999999999999999999 89999999987653
No 43
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.75 E-value=0.0036 Score=68.69 Aligned_cols=84 Identities=20% Similarity=0.230 Sum_probs=65.8
Q ss_pred ceeeEEEcCCccccccc-ccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCce---eec-c-ccccEEEechh
Q 004809 341 IDFPIVFMDECLNLAEL-KKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGLE---FFL-Q-SSFPAVFMNSK 414 (729)
Q Consensus 341 ~~~~lv~~~~c~~~~~~-~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~---~~~-~-~~~p~~~i~~~ 414 (729)
..-++++.+.+...++. .+++|||||+.++.|.+..|..+++++||.|+|++++..+.. ... . ..+|.+.++..
T Consensus 93 v~a~lv~~~~G~~~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~ 172 (421)
T 2ek8_A 93 VTAELVYVGLGTTADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQ 172 (421)
T ss_dssp EEEEEEECTTCCTTTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHH
T ss_pred cceEEEECCCCChhhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHH
Confidence 34577776655333334 489999999999999999999999999999999999843211 111 2 67999999999
Q ss_pred hHHHHHHHHh
Q 004809 415 TGDILKDYIK 424 (729)
Q Consensus 415 ~g~~l~~~~~ 424 (729)
+++.|++++.
T Consensus 173 ~a~~L~~~l~ 182 (421)
T 2ek8_A 173 EGDALAANLR 182 (421)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999984
No 44
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.59 E-value=0.0016 Score=51.48 Aligned_cols=42 Identities=14% Similarity=0.287 Sum_probs=39.1
Q ss_pred CCceEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEcCCccC
Q 004809 40 SSKLLYTYSHVLNGFSASLTPAELEALKSSPGYISSIRDLPVK 82 (729)
Q Consensus 40 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~ 82 (729)
+.+++|+|. .+++++++|+++.++.|+++|+|++|++|...+
T Consensus 22 gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 22 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp TCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred CCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 689999998 799999999999999999999999999997653
No 45
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=96.20 E-value=0.0074 Score=69.38 Aligned_cols=83 Identities=12% Similarity=0.124 Sum_probs=64.8
Q ss_pred eeeEEEcCCcccccccc---cCCceEEEEccCCCchhhHHHHHHhCCceEEEEEecCCCc-------------------e
Q 004809 342 DFPIVFMDECLNLAELK---KVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISDFDGL-------------------E 399 (729)
Q Consensus 342 ~~~lv~~~~c~~~~~~~---~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~-------------------~ 399 (729)
+-++||.+.+...++.. +++|||||+.+|.|.+..|..+++++||.|+|++++..+. .
T Consensus 109 ~g~lV~vg~G~~~D~~~l~vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp 188 (640)
T 3kas_A 109 TGKLVHANFGTKKDFEDLYTPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDP 188 (640)
T ss_dssp EECEEECTTCCHHHHHTCSSCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCS
T ss_pred EEEEEEecCCChhhHHHhhcccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCC
Confidence 56889987655544443 7999999999999999999999999999999999973210 0
Q ss_pred eec----------------c-ccccEEEechhhHHHHHHHHh
Q 004809 400 FFL----------------Q-SSFPAVFMNSKTGDILKDYIK 424 (729)
Q Consensus 400 ~~~----------------~-~~~p~~~i~~~~g~~l~~~~~ 424 (729)
..+ . ..+|++.|+..+++.|++.+.
T Consensus 189 ~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 189 YTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 000 1 358999999999999987653
No 46
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.91 E-value=0.013 Score=68.01 Aligned_cols=85 Identities=18% Similarity=0.123 Sum_probs=64.8
Q ss_pred ceeeEEEcCCccccccc-------ccCCceEEEEccCCCchhhHHHHHHhCCceEEEEEec-C----CC-----------
Q 004809 341 IDFPIVFMDECLNLAEL-------KKVGQKIVVCQDKNDSLSNQVDNIQNASVSGGVFISD-F----DG----------- 397 (729)
Q Consensus 341 ~~~~lv~~~~c~~~~~~-------~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~-~----~~----------- 397 (729)
.+-++||...+...++. .+++|||+|+++|.|.+.+|..+++++||.|+|++++ . .|
T Consensus 127 v~g~lV~v~~G~~~Df~~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p 206 (707)
T 3fed_A 127 PEGDLVYVNYARTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLP 206 (707)
T ss_dssp CEECEEECTTCCHHHHHHHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCC
T ss_pred eEEEEEEecCCchhhHHHHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCC
Confidence 35688887654443332 3699999999999999999999999999999999986 1 01
Q ss_pred ----------------ceeec-----------------c-ccccEEEechhhHHHHHHHHhh
Q 004809 398 ----------------LEFFL-----------------Q-SSFPAVFMNSKTGDILKDYIKI 425 (729)
Q Consensus 398 ----------------~~~~~-----------------~-~~~p~~~i~~~~g~~l~~~~~~ 425 (729)
+++.+ . ..||++.|+..+++.|++.+..
T Consensus 207 ~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 207 GTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp TTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CccccccceecccCCCCCCCCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 11100 1 3689999999999999988753
No 47
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.33 E-value=0.055 Score=59.65 Aligned_cols=97 Identities=15% Similarity=0.192 Sum_probs=67.0
Q ss_pred CceeeEEEcCC--cccccccccCCceEEEEccCCCc---------hhhH----HHHHHhCCceEEEEEecCCCc-e----
Q 004809 340 LIDFPIVFMDE--CLNLAELKKVGQKIVVCQDKNDS---------LSNQ----VDNIQNASVSGGVFISDFDGL-E---- 399 (729)
Q Consensus 340 ~~~~~lv~~~~--c~~~~~~~~~~gkiv~~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~~~~~~~-~---- 399 (729)
..+-++|+... |.......+++|||||+.++.|. +..| ..+++++||+|+|++++..+. .
T Consensus 105 ~vta~lV~v~~~~~~~~~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~t 184 (444)
T 3iib_A 105 GLSATIVRFDTLQDLQNAEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHT 184 (444)
T ss_dssp CEEEEEEEESSHHHHHTSCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCC
T ss_pred CeEEEEEecCCHHHHhhccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccC
Confidence 45678888653 32111116899999999998774 3344 356899999999999972211 0
Q ss_pred ---eec-c-ccccEEEechhhHHHHHHHHhhcCCcEEEEEec
Q 004809 400 ---FFL-Q-SSFPAVFMNSKTGDILKDYIKIENNATATIQFQ 436 (729)
Q Consensus 400 ---~~~-~-~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~ 436 (729)
... . ..+|++.|+..+++.|.+.+..+...+.++...
T Consensus 185 g~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 185 GMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp CBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEE
T ss_pred CccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEe
Confidence 111 2 579999999999999999998766555555443
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.22 E-value=0.19 Score=44.73 Aligned_cols=74 Identities=14% Similarity=0.058 Sum_probs=52.2
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEecCCCCCCCeeEEEEEEEEEcCCceE
Q 004809 634 SVQEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQMDEETVVAFCYLSWIETGGKHV 713 (729)
Q Consensus 634 ~~~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~l~~~~~~~~~~ 713 (729)
.+.+.+.+|+|+|+.+..|+.... + -.++.|...++. +|++..++|+|.+... +.+.+.|.+.- ++...
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~--~--~F~i~P~~g~L~-pg~~~~i~V~F~P~~~-----g~~~~~l~v~~-~~g~~ 109 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTC--R--PFSIEPAIGTLN-VGESMQLEVEFEPQSV-----GDHSGRLIVCY-DTGEK 109 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECC--T--TEEEESSEEEEC-TTCEEEEEEEECCSSS-----BCCCCBCEEEE-SSSCE
T ss_pred CeEEEEEEEEECCCCCEEEEEecC--C--CeEEECCcCEEC-CCCEEEEEEEEEcCCC-----ccEEEEEEEEE-CCCCE
Confidence 467777899999999888887653 2 366789999887 8999999999987631 14556565542 33344
Q ss_pred EEEEE
Q 004809 714 VKSPI 718 (729)
Q Consensus 714 v~~P~ 718 (729)
+.+++
T Consensus 110 ~~v~L 114 (122)
T 2ys4_A 110 VFVSL 114 (122)
T ss_dssp ECCEE
T ss_pred EEEEE
Confidence 44443
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.40 E-value=0.29 Score=60.03 Aligned_cols=25 Identities=28% Similarity=0.522 Sum_probs=23.0
Q ss_pred CCCCCCcEEEEEcccCCCCCCCCCC
Q 004809 104 SKFGKDIIIGVVDTGVWPESESYND 128 (729)
Q Consensus 104 ~~~G~gvvVgVIDtGid~~Hp~f~~ 128 (729)
.+.|+||+|||+|||||+.+|-|.-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 5789999999999999999999873
No 50
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.81 E-value=1.6 Score=37.57 Aligned_cols=66 Identities=9% Similarity=-0.010 Sum_probs=46.8
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEe-CCCcEEEEecCeEEEccCCeEEEEEEEEEecCCCCCCCeeEEEEEEEE
Q 004809 635 VQEFQRTVTNVGEGVSTYTASVTP-LKGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQMDEETVVAFCYLSWI 706 (729)
Q Consensus 635 ~~~~~rtvtnvg~~~~tY~~~v~~-p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~l~~~ 706 (729)
..+.+.+++|.|+.+..|+..... +.+...+++|..-.+. +|+++.++|+|.+.. . + ...=.|++.
T Consensus 27 ~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~-pg~~~~i~V~f~~~~--~-g--~f~~~i~v~ 93 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIE-PSGVQAIQISFSSII--L-G--NFEEEFLVN 93 (112)
T ss_dssp CEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEEC-TTBCCEEEEEECCCC--C-E--EEEEEECEE
T ss_pred EEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEEC-CCCEEEEEEEEECCC--c-c--eEEEEEEEE
Confidence 456677899999999999883211 1223477789988886 899999999998753 2 2 344456665
No 51
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=77.71 E-value=1.4 Score=48.09 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=25.4
Q ss_pred CCCceecccCCCCCCCCCCCccCcEEecCCCEEeecCC
Q 004809 444 PAPSVASYSSRGPSISCPFVLKPDVMAPGDSILAAWPS 481 (729)
Q Consensus 444 ~~~~~a~FSS~GP~~~~~~ilKPDI~APG~~I~sa~~~ 481 (729)
....++.||++||. +||+|||++|+++++.
T Consensus 182 ~~~~~~~~S~~g~~--------vdv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 182 SNLDHAAFSQYTDQ--------VEISGPGEAILSTVTV 211 (441)
T ss_dssp TTCCBCTTSCCCTT--------EEEEEECSSEEEECST
T ss_pred CCCCCCccccCCCc--------eEEEeccCCeeccccC
Confidence 34578999999974 4999999999999874
No 52
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=74.32 E-value=10 Score=36.97 Aligned_cols=81 Identities=12% Similarity=-0.020 Sum_probs=52.9
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEecCCCCCCCeeEEEEEEEEEcC----C
Q 004809 635 VQEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQMDEETVVAFCYLSWIETG----G 710 (729)
Q Consensus 635 ~~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~G~l~~~~~~----~ 710 (729)
..+.+.+++|.|+.+.+++.. ..|+-+++.+.|. .+ .+|++.+++|+++...... .+...+.|++..-+ .
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~-~~p~~~~~~~~~~--~I-~PG~~g~I~vt~~~~~~~~--~G~~~~~i~v~~~~~~~~~ 93 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVV-SLPSFVSLDDRAF--RL-QAREPRELNLSLAVPRNMP--PGMKDEPLVLEVTSPETGK 93 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEE-ECCTTEECSCCEE--EE-CSSSCEEEEEEECCCTTCC--SEEEEEEEEEEEECTTTCC
T ss_pred cceEEEEEEeCCCCceEEEec-cCCCceEeeeCcc--ee-CCCCceEEEEEEcchhccc--CCceeeEEEEEEEcCCCCc
Confidence 455677899999998888764 2366666544444 34 4899999999998765322 23667878877422 2
Q ss_pred ceEEEEEEEEE
Q 004809 711 KHVVKSPIVVT 721 (729)
Q Consensus 711 ~~~v~~P~~~~ 721 (729)
....++|+...
T Consensus 94 ~~~~~i~v~g~ 104 (220)
T 2qsv_A 94 KAVDSVMVSLP 104 (220)
T ss_dssp EEEEEEEEEEE
T ss_pred ccccEEEEEEE
Confidence 23446666653
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=70.34 E-value=52 Score=28.36 Aligned_cols=55 Identities=11% Similarity=0.173 Sum_probs=43.9
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEecCC
Q 004809 635 VQEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQ 691 (729)
Q Consensus 635 ~~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~ 691 (729)
.-..+..|.|....+.+|++++..++++++. .+..+.+. +++..++.|.+..+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~-~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVE-PGEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEEC-TTCEEEEEEEEEECGG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEEC-CCCEEEEEEEEEEChH
Confidence 4567778999999999999999987776553 35567776 8999999999988653
No 54
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=68.60 E-value=10 Score=34.30 Aligned_cols=87 Identities=9% Similarity=-0.095 Sum_probs=56.7
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEeC----CCcEEEEecCeEEEccCCeEEEEEEEEEecCCC----CCCCeeEEEEEEEE
Q 004809 635 VQEFQRTVTNVGEGVSTYTASVTPL----KGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQM----DEETVVAFCYLSWI 706 (729)
Q Consensus 635 ~~~~~rtvtnvg~~~~tY~~~v~~p----~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~----~~~~~~~~G~l~~~ 706 (729)
..+-+.+|+|+|.-+.+|++..... ..--++++|..-++. +|++..++|++...... ..+..-++--|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~-Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLE-PNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEEC-TTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccC-CCCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 4566778999999999999974311 112366789988886 89999999999864210 00111344555555
Q ss_pred EcCCceEEEEEEEEEec
Q 004809 707 ETGGKHVVKSPIVVTSL 723 (729)
Q Consensus 707 ~~~~~~~v~~P~~~~~~ 723 (729)
= .++....+|+...|.
T Consensus 123 V-e~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 123 L-DRGKDYFLTISGNYL 138 (140)
T ss_dssp E-TTSCEEEEEEEEEEC
T ss_pred e-ecCCcEEEEEecccc
Confidence 2 455566788877664
No 55
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=52.92 E-value=47 Score=29.32 Aligned_cols=51 Identities=12% Similarity=0.120 Sum_probs=35.2
Q ss_pred eeEEEEEEEEecCCCC-eEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEe
Q 004809 634 SVQEFQRTVTNVGEGV-STYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEG 688 (729)
Q Consensus 634 ~~~~~~rtvtnvg~~~-~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~ 688 (729)
...+++.||+|.|..+ ..|++.+.. .|..+.-. ...+. +|+++++++++..
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~La-~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSLG-PKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEEC-TTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--EeccC-CCCeEEEEEEEEc
Confidence 5789999999999865 568887755 44444333 23454 7888887777753
No 56
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=49.43 E-value=36 Score=35.90 Aligned_cols=55 Identities=9% Similarity=0.039 Sum_probs=42.1
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEeCCCcE----EEEecCeEEEccCCeEEEEEEEEEecC
Q 004809 635 VQEFQRTVTNVGEGVSTYTASVTPLKGFN----FSVDPDKLTFKGKYAKQSYKLRIEGPN 690 (729)
Q Consensus 635 ~~~~~rtvtnvg~~~~tY~~~v~~p~g~~----v~v~p~~l~~~~~~~~~~~~vt~~~~~ 690 (729)
..+-+.||+|+|..+.+|++.-....... ++|+|..-++. +|++.+++|++....
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~-Pge~~~i~l~~~v~~ 105 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLE-PNETVDISLDVYVSK 105 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEEC-TTCEEEEEEEECBCT
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEEC-CCCEEEEEEEEEECH
Confidence 45667789999999999998654222222 77889988886 899999999998764
No 57
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=43.71 E-value=5.1 Score=35.12 Aligned_cols=53 Identities=19% Similarity=0.176 Sum_probs=33.6
Q ss_pred EEEEEEEecCCCCeEEEEEEE-eCCCcEEEEecCeEEEc-cCCeEEEEEEEEEec
Q 004809 637 EFQRTVTNVGEGVSTYTASVT-PLKGFNFSVDPDKLTFK-GKYAKQSYKLRIEGP 689 (729)
Q Consensus 637 ~~~rtvtnvg~~~~tY~~~v~-~p~g~~v~v~p~~l~~~-~~~~~~~~~vt~~~~ 689 (729)
.+..-++|.+.+..+..+.+. .|.|+++++.|..+++. +...+++|.|++...
T Consensus 56 ~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 56 EVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp EEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred EEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 344455666543333444555 58899999999988765 244567777776654
No 58
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=41.97 E-value=63 Score=28.28 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=41.7
Q ss_pred eEEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEec
Q 004809 635 VQEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGP 689 (729)
Q Consensus 635 ~~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 689 (729)
..+-..+|+|.++...-|++...+|. ...|.|..=.+. ++++..+.|++.+.
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~--~y~VrP~~G~i~-P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPR--RYCVRPNSGVID-PGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGG--GEEEESCEEEEC-TTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCC--ceEEeCCCcEEC-CCCeEEEEEEECcC
Confidence 45667789999999899999988886 455678876554 89999999998764
No 59
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=41.10 E-value=79 Score=27.41 Aligned_cols=50 Identities=10% Similarity=0.098 Sum_probs=38.8
Q ss_pred EEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEec
Q 004809 637 EFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGP 689 (729)
Q Consensus 637 ~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 689 (729)
+.+.+|+|.++....|+++...|.-+. |.|..= |-++|++.++.|++.+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Yr--VrP~~G-~I~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHYR--VRPVYG-FVDAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTEE--EECSEE-EECTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCceE--EcCCce-EECCCCeEEEEEEeCCC
Confidence 456789999999888998888876554 567754 44589999999998764
No 60
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=40.98 E-value=55 Score=37.82 Aligned_cols=55 Identities=15% Similarity=0.056 Sum_probs=35.0
Q ss_pred eeEEEEEEEEecCCCCeEEEEEE--EeCCCc-----EEEEecCeEEEccCCeEEEEEEEEEec
Q 004809 634 SVQEFQRTVTNVGEGVSTYTASV--TPLKGF-----NFSVDPDKLTFKGKYAKQSYKLRIEGP 689 (729)
Q Consensus 634 ~~~~~~rtvtnvg~~~~tY~~~v--~~p~g~-----~v~v~p~~l~~~~~~~~~~~~vt~~~~ 689 (729)
...+++.+|||+|+....-.+.+ ..|.+. +.-.--.++.+ ++||+++++++|+..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHH
Confidence 46789999999998776555544 344321 11111122334 489999999999865
No 61
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=40.83 E-value=94 Score=26.54 Aligned_cols=50 Identities=6% Similarity=0.024 Sum_probs=39.0
Q ss_pred EEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEec
Q 004809 637 EFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGP 689 (729)
Q Consensus 637 ~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 689 (729)
+.+.+|+|.++....|+++-..|.-+. |.|..=.+ ++|++.++.|++...
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEE-CCCCeEEEEEEeCCC
Confidence 346789999999999999888886554 56875444 589999999988763
No 62
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=39.94 E-value=1.6e+02 Score=32.63 Aligned_cols=78 Identities=8% Similarity=-0.089 Sum_probs=49.2
Q ss_pred CCCceeeeeccCCCceeEEEEEEEEecCCCCeEE-EEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEecCCCCCCCe
Q 004809 619 NYPSFIAFFNANESKSVQEFQRTVTNVGEGVSTY-TASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGPNQMDEETV 697 (729)
Q Consensus 619 N~ps~~~~~~~~~~~~~~~~~rtvtnvg~~~~tY-~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~ 697 (729)
..|.+++.-. .+.+++.+|+|-+..+..- ++++..|.+.+++. ....+. +|++.+++++|+.+.... ..
T Consensus 363 ~~~~~~~~~g-----~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~g~~~t~~~~vt~~~~~~-~g- 432 (601)
T 1w8o_A 363 TIPDVALEPG-----QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLM-PGRQAKGQVTITVPAGTT-PG- 432 (601)
T ss_dssp ECCCEEECTT-----CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBC-TTCEEEEEEEEECCTTCC-CE-
T ss_pred cCccceecCC-----ceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccC-CCCceEEEEEEecCCCCC-CC-
Confidence 3466666522 4788999999976543222 44467799998887 233444 789999888888765433 12
Q ss_pred eEEEEEEEE
Q 004809 698 VAFCYLSWI 706 (729)
Q Consensus 698 ~~~G~l~~~ 706 (729)
.+.=-+.+.
T Consensus 433 ~y~l~~~~~ 441 (601)
T 1w8o_A 433 RYRVGATLR 441 (601)
T ss_dssp EEEEEEEEE
T ss_pred cEEeeEEEE
Confidence 333334555
No 63
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=36.67 E-value=95 Score=27.16 Aligned_cols=50 Identities=18% Similarity=0.252 Sum_probs=40.4
Q ss_pred EEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEe
Q 004809 636 QEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEG 688 (729)
Q Consensus 636 ~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~ 688 (729)
.+-..+|+|.++...-|+++..+|.- ..|.|..=.+. ++++..+.|++.+
T Consensus 27 ~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii~-P~~s~~v~V~~q~ 76 (126)
T 1msp_A 27 HTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVLD-PKEKVLMAVSCDT 76 (126)
T ss_dssp CCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEEC-TTCEEEEEEEECC
T ss_pred eEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEEC-CCCEEEEEEEecC
Confidence 34456899999999999999888875 45678876665 8999999999876
No 64
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=36.64 E-value=67 Score=29.22 Aligned_cols=51 Identities=16% Similarity=0.210 Sum_probs=41.1
Q ss_pred EEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEec
Q 004809 636 QEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGP 689 (729)
Q Consensus 636 ~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 689 (729)
.+-..+|+|.++....|++...+|.- ..|.|..=.+. ++++..+.|++...
T Consensus 37 ~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI~-P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 37 KKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSCD-PGASIDIIVSPHGG 87 (152)
T ss_dssp CCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEEC-TTCEEEEEEEECSS
T ss_pred EEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEEC-CCCeEEEEEEecCc
Confidence 34567899999998999999888864 55678876665 89999999999764
No 65
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=35.38 E-value=1.2e+02 Score=26.39 Aligned_cols=70 Identities=10% Similarity=-0.056 Sum_probs=43.3
Q ss_pred eeEEEEEEEEecCCCCeE--------EEEEEEeCCCcEEEEe---------cCeEEEccCCeEEEEEEEEEecCCCCCCC
Q 004809 634 SVQEFQRTVTNVGEGVST--------YTASVTPLKGFNFSVD---------PDKLTFKGKYAKQSYKLRIEGPNQMDEET 696 (729)
Q Consensus 634 ~~~~~~rtvtnvg~~~~t--------Y~~~v~~p~g~~v~v~---------p~~l~~~~~~~~~~~~vt~~~~~~~~~~~ 696 (729)
....++.+|+|.++.+.+ |.+.|....|-.|--. -...++. +||++.|+.++... +..+.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~-pGE~~~f~~~w~~~--~~pG~ 94 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLE-SGETYDFSDVWKEV--PEPGT 94 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEEC-TTCEEEEEEEESSC--CCSEE
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEEC-CCCEEEEEEEeCCC--CCCcc
Confidence 478889999999986543 5566666666555411 1233554 89999999999731 22133
Q ss_pred eeEEEEEEEE
Q 004809 697 VVAFCYLSWI 706 (729)
Q Consensus 697 ~~~~G~l~~~ 706 (729)
=.+.++++=.
T Consensus 95 Ytl~a~l~~~ 104 (120)
T 3isy_A 95 YEVKVTFKGR 104 (120)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEEEee
Confidence 0356666544
No 66
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=34.05 E-value=25 Score=26.71 Aligned_cols=32 Identities=13% Similarity=0.144 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHhhCCCCCHHHHHHHHHhccc
Q 004809 507 CPQAAGIAALLRGAHPEWSPAAIRSAIMTTSD 538 (729)
Q Consensus 507 aP~VAG~aALl~q~~P~~sp~~Ik~~L~~TA~ 538 (729)
.|..--....|++.+|+++...|+..|...-.
T Consensus 6 ~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 6 SGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 33444567789999999999999999987543
No 67
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=33.96 E-value=1e+02 Score=36.22 Aligned_cols=69 Identities=16% Similarity=0.135 Sum_probs=41.0
Q ss_pred CCCCCceeee--eccCCCceeEEEEEEEEecC-CCCeEEEEEE--EeCCC-----cEEEEecCeEEEccCCeEEEEEEEE
Q 004809 617 DLNYPSFIAF--FNANESKSVQEFQRTVTNVG-EGVSTYTASV--TPLKG-----FNFSVDPDKLTFKGKYAKQSYKLRI 686 (729)
Q Consensus 617 ~lN~ps~~~~--~~~~~~~~~~~~~rtvtnvg-~~~~tY~~~v--~~p~g-----~~v~v~p~~l~~~~~~~~~~~~vt~ 686 (729)
-|-|-+|..+ .+.-. ....+++.+|||+| +.+..-.+.+ ..|.+ ++--+-=.++.+ ++||+++++++|
T Consensus 717 GLSYTtF~ys~~~l~v~-~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l 794 (845)
T 3abz_A 717 GLSYTTFELDISDFKVT-DDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHL-EPGEKKTVNIDL 794 (845)
T ss_dssp CBCSSCEEEEEEEEEEC-SSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE-CTTCEEEEEEEE
T ss_pred CCcceeEEEeccccccc-CCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEE-CCCCEEEEEEEe
Confidence 5667777766 43211 24688999999999 7655544433 33422 111111122334 489999999999
Q ss_pred E
Q 004809 687 E 687 (729)
Q Consensus 687 ~ 687 (729)
+
T Consensus 795 ~ 795 (845)
T 3abz_A 795 E 795 (845)
T ss_dssp E
T ss_pred C
Confidence 8
No 68
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=32.08 E-value=1.8e+02 Score=27.90 Aligned_cols=78 Identities=14% Similarity=0.090 Sum_probs=47.3
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEEeCCC-cEEEEecCeEEEccCCeEEEEEEEEEecCCCCCCCee----EEEEEEEEEc
Q 004809 634 SVQEFQRTVTNVGEGVSTYTASVTPLKG-FNFSVDPDKLTFKGKYAKQSYKLRIEGPNQMDEETVV----AFCYLSWIET 708 (729)
Q Consensus 634 ~~~~~~rtvtnvg~~~~tY~~~v~~p~g-~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~----~~G~l~~~~~ 708 (729)
...+.+.+++|+|+.+...+ .++..-| ..++... -.+. +||+.+++|+++.... . ++ ....|+....
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~scgct~~~~~~--~~i~-PGe~~~i~v~~~~~~~-~---g~~~~~~~~~i~v~~N 205 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTRNPALTAVPDR--TEIK-PGGSTLLRIAVDPQVM-K---AEGWQSIAADISIICN 205 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEECSTTEEEEESC--SEEC-TTCEEEEEEEECHHHH-H---HTTCSEEEEEEEEEES
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeCCCCEeeecCC--ccCC-CCCEEEEEEEEecCCC-C---CcccceeccEEEEEEC
Confidence 35667789999999887764 3333333 3444333 3444 8999999999987532 1 14 5677776633
Q ss_pred CC-ceEEEEEEE
Q 004809 709 GG-KHVVKSPIV 719 (729)
Q Consensus 709 ~~-~~~v~~P~~ 719 (729)
+. .+.+++.|-
T Consensus 206 ~~~~p~~~l~i~ 217 (220)
T 2qsv_A 206 DPQAPLRRIKVK 217 (220)
T ss_dssp CTTCSEEEEEEE
T ss_pred CCCCcEEEEEEE
Confidence 33 344555554
No 69
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=30.99 E-value=93 Score=27.98 Aligned_cols=51 Identities=8% Similarity=0.081 Sum_probs=40.4
Q ss_pred EEEEEEEEecCCCCeEEEEEEEeCCCcEEEEecCeEEEccCCeEEEEEEEEEec
Q 004809 636 QEFQRTVTNVGEGVSTYTASVTPLKGFNFSVDPDKLTFKGKYAKQSYKLRIEGP 689 (729)
Q Consensus 636 ~~~~rtvtnvg~~~~tY~~~v~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 689 (729)
.+-..+|+|.++...-|++....|.- ..|.|..=.+ .++++..+.|++.+.
T Consensus 33 ~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 33 VTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred EEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 34567899999998999999888875 4557886555 589999999999764
No 70
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=27.46 E-value=64 Score=37.35 Aligned_cols=73 Identities=15% Similarity=0.053 Sum_probs=40.8
Q ss_pred CCCCCceeeeeccCC-CceeEEEEEEEEecCCCCeEEEEE--EEeCCCc-----EEEEecCeEEEccCCeEEEEEEEEEe
Q 004809 617 DLNYPSFIAFFNANE-SKSVQEFQRTVTNVGEGVSTYTAS--VTPLKGF-----NFSVDPDKLTFKGKYAKQSYKLRIEG 688 (729)
Q Consensus 617 ~lN~ps~~~~~~~~~-~~~~~~~~rtvtnvg~~~~tY~~~--v~~p~g~-----~v~v~p~~l~~~~~~~~~~~~vt~~~ 688 (729)
-|-|-+|..+...-. .....+++.+|||+|+.+..-.+. +..|.+- +.-+--.++.+-++||+++++++|+.
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~ 676 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV 676 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEECH
Confidence 455666655433100 014688999999999876544443 3444321 11111112202258999999999987
Q ss_pred c
Q 004809 689 P 689 (729)
Q Consensus 689 ~ 689 (729)
.
T Consensus 677 ~ 677 (721)
T 2x41_A 677 R 677 (721)
T ss_dssp G
T ss_pred H
Confidence 5
No 71
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=27.13 E-value=86 Score=25.86 Aligned_cols=26 Identities=12% Similarity=0.199 Sum_probs=19.1
Q ss_pred EEEEecCeEEEccCCeEEEEEEEEEec
Q 004809 663 NFSVDPDKLTFKGKYAKQSYKLRIEGP 689 (729)
Q Consensus 663 ~v~v~p~~l~~~~~~~~~~~~vt~~~~ 689 (729)
.|++.|..+++. .|++..++.++.+.
T Consensus 8 ~i~l~~~~~~l~-vG~t~~L~atv~P~ 33 (91)
T 2l04_A 8 GMTVTPASTSVV-KGQSTTLTVAFQPE 33 (91)
T ss_dssp CEEEECCCEEEE-TTCEEEEEEEECCS
T ss_pred EEEEeCCceEEE-cCCEEEEEEEEecc
Confidence 466678888886 78888877777654
No 72
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=21.61 E-value=64 Score=29.57 Aligned_cols=32 Identities=22% Similarity=0.171 Sum_probs=26.7
Q ss_pred eccccchhHHHHHHHHHHHhhCCCCCHHHHHHH
Q 004809 500 QSGTSMACPQAAGIAALLRGAHPEWSPAAIRSA 532 (729)
Q Consensus 500 ~sGTSMAaP~VAG~aALl~q~~P~~sp~~Ik~~ 532 (729)
+.|-| =|+.|-|++|||.+.+-..+|++|.+.
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 44555 379999999999999999999998753
No 73
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=20.67 E-value=2.1e+02 Score=30.06 Aligned_cols=50 Identities=18% Similarity=0.223 Sum_probs=32.6
Q ss_pred eeEEEEEEEEecCCCCeE---EE-EEEE--e----------C------CCcEEEEecCeEEEccCCeEEEEEEEEEec
Q 004809 634 SVQEFQRTVTNVGEGVST---YT-ASVT--P----------L------KGFNFSVDPDKLTFKGKYAKQSYKLRIEGP 689 (729)
Q Consensus 634 ~~~~~~rtvtnvg~~~~t---Y~-~~v~--~----------p------~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 689 (729)
.+.+++.+|||.|+.+.. |+ +.++ . | .| ++ +|+ -. .+||+++++|+.+-.
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~da 369 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQDA 369 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEECH
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeehH
Confidence 578899999999998643 22 2221 1 1 13 34 555 33 489999999888743
Done!